RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAN2A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038886

Ensembl transcript IDs: ENSMUST00000098346.5, ENSMUST00000205853.2, ENSMUST00000206301.2, ENSMUST00000206807.2

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCGTAGCCGAGCTCCAGTGCACACTGATCTGCACAGACAGGGGCTaGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAGTTGACCAGC +
Preference number: 1 (lower is better)
Translates to: SVAELQCTLICTDRG*PSSERTRTRGELTS
Trigger: GCTGGTCAACTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR GCA 90 bp TCTGAAGCAAGCCCTTCCTGCACCCAGCAGCCCCTAGCCAGGGCATaGAGGCCCAGTGGCACTCAGAGCAGGCCCAGTGGCACTCAGAAC +
Preference number: 1 (lower is better)
Translates to: SEASPSCTQQPLARA*RPSGTQSRPSGTQN
Trigger: GTTCTGAGTGCCACTGGGCCTGCTCTGAGTGCCACTGGGCCTGCATGCCCTGGCTAGGGGCTGCTGGGTGCAGGAAGGGCTTGCTTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 90 bp GGCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTaGCTGCCTGCTGACGGACAGTTTCACGCCGTTCAGGTAGACCCG +
Preference number: 1 (lower is better)
Translates to: GEVAGAGVHNTDREC*LPADGQFHAVQVDP
Trigger: CGGGTCTACCTGAACGGCGTGAAACTGTCCGTCAGCAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR CCA 90 bp GGTGAGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATaGCTTACACGGCTGTCATCCATTTGGAGGAAGGGTGTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: GEESSRITVRSGRAS*LTRLSSIWRKGVPG
Trigger: CCCTGGGACACCCTTCCTCCAAATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR TCA 90 bp CGTCCACACAGCGGGCAGGTAATACTTCTGCAGGTGGGATACGAGTaGACCTCCTCAGCCCACCAGGGGCCCCAGCACAGGATGCCTTCC +
Preference number: 1 (lower is better)
Translates to: RPHSGQVILLQVGYE*TSSAHQGPQHRMPS
Trigger: GGAAGGCATCCTGTGCTGGGGCCCCTGGTGGGCTGAGGAGGTTCACTCGTATCCCACCTGCAGAAGTATTACCTGCCCGCTGTGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR GCA 90 bp GGAGAAGCCAGAGGGTGGAAAGAGCGCAGAGCAGGGCTAGTGCCCTaGCTCTTGGCCACGGGTAAGACAAGAGGAGGTGTGCTGAGGTAC +
Preference number: 1 (lower is better)
Translates to: GEARGWKERRAGLVP*LLATGKTRGGVLRY
Trigger: GTACCTCAGCACACCTCCTCTTGTCTTACCCGTGGCCAAGAGGCAGGGCACTAGCCCTGCTCTGCGCTCTTTCCACCCTCTGGCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 90 bp GGTTCTTGGCTTCAAGGCCACAGTCAAACCCCTTGCGGTGTAAGATaGGCGCAGAGTCAGTTGCGGGCAAGGTGTCCTCGGCTGGGAGCA +
Preference number: 1 (lower is better)
Translates to: GSWLQGHSQTPCGVR*AQSQLRARCPRLGA
Trigger: TGCTCCCAGCCGAGGACACCTTGCCCGCAACTGACTCTGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR GCA 90 bp GATACGAGTGAACCTCCTCAGCCCACCAGGGGCCCCAGCACAGGATaGCTTCCCAAGACACCCAAGCACAGCCCTCTTGGAAACTCTGTT +
Preference number: 1 (lower is better)
Translates to: DTSEPPQPTRGPSTG*LPKTPKHSPLGNSV
Trigger: AACAGAGTTTCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCTGGTGGGCTGAGGAGGTTCACTCGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CCA 90 bp GGCTGGGAGCATGCGCAGATTGAGCAAATGGAAGTCACAGGGCAATaGAGAAGCCAGAGGGTGGAAAGAGCGCAGAGCAGGGCTAGTGCC +
Preference number: 1 (lower is better)
Translates to: GWEHAQIEQMEVTGQ*RSQRVERAQSRASA
Trigger: GGCACTAGCCCTGCTCTGCGCTCTTTCCACCCTCTGGCTTCTCCATTGCCCTGTGACTTCCATTTGCTCAATCTGCGCATGCTCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 90 bp ATCACCCTGCTCCTGTACCCTCATACCAGCACTGTGGGGTCCATATaGCCCCGCAGAGCAAGCTCATACCTGCAGTCTCCTAGCGTGAGG +
Preference number: 1 (lower is better)
Translates to: ITLLLYPHTSTVGSI*PRRASSYLQSPSVR
Trigger: CCTCACGCTAGGAGACTGCAGGTATGAGCTTGCTCTGCGGGGTCATATGGACCCCACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR GCA 90 bp TTGGAAGGTGAGGCCAGAGGGTATAGCAAAGTCAAGGAGGTTGGCTaGAGGAAGGTCACATCCAGGCCATGGAAGAGGCTCCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: LEGEARGYSKVKEVG*RKVTSRPWKRLPRA
Trigger: AGCCCTGGGGAGCCTCTTCCATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 90 bp CTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTaGGGTCCATATGACCCCGCAGAGCAAGCTCATACCTGCAGTCTC +
Preference number: 1 (lower is better)
Translates to: LLPESPCSCTLIPAL*GPYDPAEQAHTCSL
Trigger: GAGACTGCAGGTATGAGCTTGCTCTGCGGGGTCATATGGACCCCACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 90 bp GGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTCTGTGGATaGACCCTGTCTTCAGGCCACAAGAAGCCCTGGCCTAGCCCAAGC +
Preference number: 1 (lower is better)
Translates to: GLSSLVLVLGGSLCG*TLSSGHKKPWPSPS
Trigger: GCTTGGGCTAGGCCAGGGCTTCTTGTGGCCTGAAGACAGGGTTCATCCACAGAGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 90 bp GCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTaGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: AQSVTSEAERRGDLV*LVQLSLGVRRQSLW
Trigger: CCACAGAGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR CCA 90 bp GCACAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTaGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTC +
Preference number: 1 (lower is better)
Translates to: AQHSLSLLRQSGGET*CGLSSLVLVLGGSL
Trigger: GAGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR CCA 90 bp AGGAGGCGGAAACGGTTGCAGGTGATCTTGTTGTCTTTGAGCCCTTaGCCTAGTCCCCGGTTGTCATCCTGCATTAGCCTTCGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: RRRKRLQVILLSLSP*PSPRLSSCISLRSK
Trigger: CTTGGACCGAAGGCTAATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR GCA 90 bp GCTGTGAAGTCATTTCCTCTGCTGTGGTGTGTTCTCTGCCACACGTaGTGCCTAACCACAGGCCCAAAAGCAATCGGTCTGCCTGACTGT +
Preference number: 1 (lower is better)
Translates to: AVKSFPLLWCVLCHT*CLTTGPKAIGLPDC
Trigger: ACAGTCAGGCAGACCGATTGCTTTTGGGCCTGTGGTTAGGCAGCACGTGTGGCAGAGAACACACCACAGCAGAGGAAATGACTTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR TCA 90 bp TGTCTGTGTGGATGCGCAGGGCCAGTTCCTTGTTCACATAGTCCCTaGTATCTACCTGGAATGACATGTCCAGAGACAGCCCCTCTACCC +
Preference number: 1 (lower is better)
Translates to: CLCGCAGPVPCSHSP*YLPGMTCPETAPLP
Trigger: GGGTAGAGGGGCTGTCTCTGGACATGTCATTCCAGGTAGATATCAGGGACTATGTGAACAAGGAACTGGCCCTGCGCATCCACACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 90 bp GTGCAGCGTGAGGCGCCTCTGGGAATCTTGGATATAGGCCATGACTaGCATAGGGTAGAAATTAGCCTGCAGGGGCAGCTTCTTCAGATA +
Preference number: 1 (lower is better)
Translates to: VQREAPLGILDIGHD*HRVEISLQGQLLQI
Trigger: TATCTGAAGAAGCTGCCCCTGCAGGCTAATTTCTACCCTATGCCAGTCATGGCCTATATCCAAGATTCCCAGAGGCGCCTCACGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 90 bp CAACCCCTCTCTTGCATTCTGGCTGTGAAGTCATTTCCTCTGCTGTaGTGTGTTCTCTGCCACACGTGCTGCCTAACCACAGGCCCAAAA +
Preference number: 1 (lower is better)
Translates to: QPLSCILAVKSFPLL*CVLCHTCCLTTGPK
Trigger: TTTTGGGCCTGTGGTTAGGCAGCACGTGTGGCAGAGAACACACCACAGCAGAGGAAATGACTTCACAGCCAGAATGCAAGAGAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR TCA 90 bp CACAGGTGTACCACAACAACCAACCCCTCTCTTGCATTCTGGCTGTaGAGTCATTTCCTCTGCTGTGGTGTGTTCTCTGCCACACGTGCT +
Preference number: 1 (lower is better)
Translates to: HRCTTTTNPSLAFWL*SHFLCCGVFSATRA
Trigger: AGCACGTGTGGCAGAGAACACACCACAGCAGAGGAAATGACTTCACAGCCAGAATGCAAGAGAGGGGTTGGTTGTTGTGGTACACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR CCA 90 bp CCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTaGAAACTCTGTTTCCATTTTAGAGAAAGGAATCCTGCCAGGATC +
Preference number: 1 (lower is better)
Translates to: PQHRMPSQDTQAQPS*KLCFHFRERNPARI
Trigger: GATCCTGGCAGGATTCCTTTCTCTAAAATGGAAACAGAGTTTCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 90 bp CAGGGCCAGTTCCTTGTTCACATAGTCCCTGATATCTACCTGGAATaGCATGTCCAGAGACAGCCCCTCTACCCCTGGCAGGTTATAAAG +
Preference number: 1 (lower is better)
Translates to: QGQFLVHIVPDIYLE*HVQRQPLYPWQVIK
Trigger: CTTTATAACCTGCCAGGGGTAGAGGGGCTGTCTCTGGACATGTCATTCCAGGTAGATATCAGGGACTATGTGAACAAGGAACTGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 90 bp ACTGTGTTGTGCTGGCTGACCTGGAATTCACCATGTAGACCAGGCTaGTCTCAAATTTACAGAGATCCACCTGTCTCAGTCTCTCCAGTG +
Preference number: 1 (lower is better)
Translates to: TVLCWLTWNSPCRPG*SQIYRDPPVSVSPV
Trigger: CACTGGAGAGACTGAGACAGGTGGATCTCTGTAAATTTGAGACCAGCCTGGTCTACATGGTGAATTCCAGGTCAGCCAGCACAACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR GCA 90 bp GTTCCCTATCATTTGATTACAAACCATATGGTAGCAAATAAGTCTTaGTGTAGGCGCAACCCCTGCTCTGTGCTAAGCGCTCCCCACTCT +
Preference number: 1 (lower is better)
Translates to: VPYHLITNHMVANKS*CRRNPCSVLSAPHS
Trigger: AGAGTGGGGAGCGCTTAGCACAGAGCAGGGGTTGCGCCTACAGCAAGACTTATTTGCTACCATATGGTTTGTAATCAAATGATAGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 90 bp GATTCTCTATTGATTGAAGCAAAAACGAAGGTTCATCCAAGCACATaGCCTCCTAATTTTGTCTCTGCCTTCCTCGTCCACACAGCGGGC +
Preference number: 1 (lower is better)
Translates to: DSLLIEAKTKVHPST*PPNFVSAFLVHTAG
Trigger: GCCCGCTGTGTGGACGAGGAAGGCAGAGACAAAATTAGGAGGTCATGTGCTTGGATGAACCTTCGTTTTTGCTTCAATCAATAGAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 90 bp CTAGTGACGTTCTCTGAGAAGTCAAAACACACTTTTCTCCAGCAGTaGCAGAACTCACTGCAGACTCGTTTCCACCCACACAGCTGTATT +
Preference number: 1 (lower is better)
Translates to: LVTFSEKSKHTFLQQ*QNSLQTRFHPHSCI
Trigger: AATACAGCTGTGTGGGTGGAAACGAGTCTGCAGTGAGTTCTGTCACTGCTGGAGAAAAGTGTGTTTTGACTTCTCAGAGAACGTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 90 bp ACTTTGCTTTTACCAACTCTTATCATTTATAGACAGATTCTCTATTaGTTGAAGCAAAAACGAAGGTTCATCCAAGCACATGACCTCCTA +
Preference number: 1 (lower is better)
Translates to: TLLLPTLIIYRQILY*LKQKRRFIQAHDLL
Trigger: TAGGAGGTCATGTGCTTGGATGAACCTTCGTTTTTGCTTCAATCAATAGAGAATCTGTCTATAAATGATAAGAGTTGGTAAAAGCAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 90 bp GACAGGGGCTGGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAGTaGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGG +
Preference number: 2 (lower is better)
Translates to: DRGWPSSERTRTRGE*TSRDTTLSRSCSSG
Trigger: CCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCAGCCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR TCA 90 bp GCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGGCACCCGGGGCGAGTTaGCCAGCAGGGACACCACAC +
Preference number: 2 (lower is better)
Translates to: AKSLAPESTTRTGNADCLAPGAS*PAGTPH
Trigger: GTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGC...CAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR TCA 90 bp GCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGGCAGGGACACCACACTaGGCCGCTCCTGTTCCAGCG +
Preference number: 2 (lower is better)
Translates to: AKSLAPESTTRTGNADCLAGTPH*AAPVPA
Trigger: CGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGC...CAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR TCA 90 bp CATGTAGCGATTGCTGATGGCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACGCACCCGGGGCGAGTTaGCCAGCAGGGACACCACAC +
Preference number: 2 (lower is better)
Translates to: HVAIADGEVAGAGVHNTDAPGAS*PAGTPH
Trigger: GTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGC...GTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCCATCAGCAATCGCTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR GCA 90 bp TCGGTCCAAGATCACCTCCAGCTGGCCATTACCGAGGCTGGAGACACCCAGAGCTCTCCCCTGTCTCTCTaGCCCCGCCGCCTGCTGATG +
Preference number: 2 (lower is better)
Translates to: SVQDHLQLAITEAGDTQSSPLSL*PRRLLM
Trigger: CATCAGCAGGCGGCGGGGGCAGAGAGACAGGGGAGA...GCTCTGGGTGTCTCCAGCCTCGGTAATGGCCAGCTGGAGGTGATCTTGGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR GCA 90 bp GCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGCAGTGCACACTGATCTaGACAGACAGGGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: AKSLAPESTTRTGNADCLQCTLI*TDRGWP
Trigger: GGGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTG...CAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CCA 90 bp CTGCTCCTGCTCCTCATCCACCCGTCGGATGCTCTTGAGAAGCCCAGTAAGGCCGGGCCCATCGAGATCTaGCTGCAGCTGCAGCACACC +
Preference number: 2 (lower is better)
Translates to: LLLLLIHPSDALEKPSKAGPIEI*LQLQHT
Trigger: GGTGTGCTGCAGCTGCAGCCAGATCTCGATGGGCCC...GGCCTTACTGGGCTTCTCAAGAGCATCCGACGGGTGGATGAGGAGCAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205853.2
3UTR-3UTR GCA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGAGCCTGGGCAGTGTaGAGCGTGAGGCGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRRAWAV*SVRRLW
Trigger: CCAGAGGCGCCTCACGCTGCACACTGCCCAGGCTCT...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp AGCCAGGCTCTGGGCTCATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTGAGACACCCAGAGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: SQALGSLWSDVLTGGGNGETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCTCTGGGTGTCTC...ACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp GGAAGACTGCAGCGTGTAGGGCCCATCGAGATCTGGCTGCAGCTGCAGCACACCCGGCTGTCATCCATTTaGAGGAAGGGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GRLQRVGPIEIWLQLQHTRLSSI*RKGVPG
Trigger: CCCTGGGACACCCTTCCTCCAAATGGATGACAGCCG...GGTGTGCTGCAGCTGCAGCCAGATCTCGATGGGCCCTACACGCTGCAGTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CCA 90 bp CTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGCTGACGGACATACCACCACAAACCTaGGTGAGGAGTCCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: LAPESTTRTGNADCLLTDIPPQT*VRSPAG
Trigger: TCCGGCTGGACTCCTCACCCAGGTTTGTGGTGGTAT...GTCCGTCAGCAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR CAA 90 bp GCCAGAGGGTGGAAAGAGCGCAGAGCAGGGCTAGTGCCCTGCCTCTaGGCCACGGGTAAGACAAGAGGAGGTGTGCTGAGGTACATGGAT +
Preference number: 2 (lower is better)
Translates to: ARGWKERRAGLVPCL*ATGKTRGGVLRYMD
Trigger: ATCCATGTACCTCAGCACACCTCCTCTTGTCTTACCCGTGGCCAAGAGGCAGGGCACTAGCCCTGCTCTGCGCTCTTTCCACCCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGCCGTGGCCTCTGGCCTaGAGTCTGAAGCAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLPWPLA*SLKQAL
Trigger: AAGGGCTTGCTTCAGACTCCAGGCCAGAGGCCACGG...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCGCCGGAGTCCGGCTGTCATCCATTTaGAGGAAGGGTGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: EPDLHVAIADGEVAGAGVRLSSI*RKGVPG
Trigger: CCCTGGGACACCCTTCCTCCAAATGGATGACAGCCG...GACTCCGGCGCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CCA 90 bp TTCCATCTGCTGCTCCTGCTCCTCATCCACCCGTCGGATGCTCTTGAGAAGCCCTGCACAGACAGGGGCTaGCCCTCCTCTGAAAGGACG +
Preference number: 2 (lower is better)
Translates to: FHLLLLLLIHPSDALEKPCTDRG*PSSERT
Trigger: CGTCCTTTCAGAGGAGGGCCAGCCCCTGTCTGTGCA...GGGCTTCTCAAGAGCATCCGACGGGTGGATGAGGAGCAGGAGCAGCAGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205853.2
3UTR-3UTR TCA 90 bp AGCCAGGCTCTGGGCTCATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTACAGTCTGTCACTTCTaGGGCAGAGCGGAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: SQALGSLWSDVLTGGGNGTVCHF*GRAEGR
Trigger: TCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGT...ACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp AGCCAGGCTCTGGGCTCATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTAGCGGAGGGGAGACTTaGTGTGGCTTGTCCAGCTTA +
Preference number: 2 (lower is better)
Translates to: SQALGSLWSDVLTGGGNGSGGET*CGLSSL
Trigger: TAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCT...ACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCGGCATGCAGGCCCAGTaGCACTCAGAGCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFGMQAQ*HSEQAQ
Trigger: CTGGGCCTGCTCTGAGTGCCACTGGGCCTGCATGCC...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp TTGGAAGGTGAGGCCAGAGGGTATAGCAAAGTCAAGGAGGTTGGCTGCAGGAAGGGCCATTACCGAGGCTaGAGACACCCAGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LEGEARGYSKVKEVGCRKGHYRG*RHPEPG
Trigger: CCCAGGCTCTGGGTGTCTCCAGCCTCGGTAATGGCC...CTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp AAGGCCGGAGAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCATACCACCACAAACCTaGGTGAGGAGTCCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: KAGEPDLHVAIADGEVAGIPPQT*VRSPAG
Trigger: TCCGGCTGGACTCCTCACCCAGGTTTGTGGTGGTAT...GCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR CAA 90 bp GGCACAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTaGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: GTAQSVTSEAERRGD*VWLVQLSLGVRRQS
Trigger: AGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR CAA 90 bp ACCCAGAGCCTGGGCAGTGTGCAGCGTGAGGCGCCTCTGGGAATCTaGGATATAGGCCATGACTGGCATAGGGTAGAAATTAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: TQSLGSVQREAPLGI*DIGHDWHRVEISLQ
Trigger: CTGCAGGCTAATTTCTACCCTATGCCAGTCATGGCCTATATCCAAGATTCCCAGAGGCGCCTCACGCTGCACACTGCCCAGGCTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp GTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTTGCAGGTGATCTaGTTGTCTTTGAGCCCTTGGCCTAGTCCCCGGTTGTCATCCTGC +
Preference number: 2 (lower is better)
Translates to: VVRRSNRRRKRLQVI*LSLSPWPSPRLSSC
Trigger: GCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp TCTGGGCTCATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTaGCAGGTGATCTTGTTGTCTTTGAGCCCTTGGCCTAGTCCCCGG +
Preference number: 2 (lower is better)
Translates to: SGLIVVRRSNRRRKR*QVILLSLSPWPSPR
Trigger: CCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp CAGTTGAAGCCCAGGTTCTTGGCTTCAAGGCCACAGTCAAACCCCTaGCGGTGTAAGATGAGCGCAGAGTCAGTTGCGGGCAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: QLKPRFLASRPQSNP*RCKMSAESVAGKVS
Trigger: GGACACCTTGCCCGCAACTGACTCTGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp TGCTGTTGGAAGGTGAGGCCAGAGGGTATAGCAAAGTCAAGGAGGTaGGCTGCAGGAAGGTCACATCCAGGCCATGGAAGAGGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: CCWKVRPEGIAKSRR*AAGRSHPGHGRGSP
Trigger: TGGGGAGCCTCTTCCATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR GCA 90 bp AAGGCCGGAGAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCACAGGGAATGCTGACTaGCTGCTGACGGACAGTTTC +
Preference number: 2 (lower is better)
Translates to: KAGEPDLHVAIADGEVAGTGNAD*LLTDSF
Trigger: GAAACTGTCCGTCAGCAGGCAGTCAGCATTCCCTGT...GCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CCA 90 bp AGCCAGGCTCTGGGCTCATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTAGGAGGCAGTCTCTGTaGATGAACCCTGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SQALGSLWSDVLTGGGNGRRQSL*MNPVFR
Trigger: CCTGAAGACAGGGTTCATCCACAGAGACTGCCTCCT...ACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR GCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTCTCCCTGACCTCTTCTaGTTGTCCCCACTCTTCCTA +
Preference number: 2 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCLPDLF*LSPLFL
Trigger: TAGGAAGAGTGGGGACAAGCAGAAGAGGTCAGGGAG...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGGAAGGCAGAGGCAGGTaGATTTCTGAGTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: AVWPEPGNINHGDPARTQEGRGR*ISEFKA
Trigger: GGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTTC...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGATGTCAGTGCTGTTaGAAGGTGAGGCCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRRCQCC*KVRPEG
Trigger: ACCCTCTGGCCTCACCTTCCAACAGCACTGACATCT...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp TTGCAGGTGATCTTGTTGTCTTTGAGCCCTTGGCCTAGTCCCCGGTaGTCATCCTGCATTAGCCTTCGGTCCAAGATCACCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LQVILLSLSPWPSPR*SSCISLRSKITSSW
Trigger: CCAGCTGGAGGTGATCTTGGACCGAAGGCTAATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp GTCCGACGTTCTAACAGGAGGCGGAAACGGTTGCAGGTGATCTTGTaGTCTTTGAGCCCTTGGCCTAGTCCCCGGTTGTCATCCTGCATT +
Preference number: 2 (lower is better)
Translates to: VRRSNRRRKRLQVIL*SLSPWPSPRLSSCI
Trigger: AATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACGTCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 90 bp AGGGCTAGCTTGCCTTGGCTTGTGGTACAGTTGAAGCCCAGGTTCTaGGCTTCAAGGCCACAGTCAAACCCCTTGCGGTGTAAGATGAGC +
Preference number: 2 (lower is better)
Translates to: RASLPWLVVQLKPRF*ASRPQSNPLRCKMS
Trigger: GCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCCAAGGCAAGCTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR TCA 90 bp AAGGTCACATCCAGGCCATGGAAGAGGCTCCCCAGGGCTAGCTTGCCTTGGCTTATTTTGGGAAAAGGATaGAGCCTGAGTTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: KVTSRPWKRLPRASLPWLILGKG*SLSCAQ
Trigger: CTGGGCACAACTCAGGCTTCATCCTTTTCCCAAAAT...AAGCCAAGGCAAGCTAGCCCTGGGGAGCCTCTTCCATGGCCTGGATGTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR GCA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCGAAGCAAGCCCTTCCTaGACCCAGCAGCCCCTAGCC +
Preference number: 2 (lower is better)
Translates to: AEESKSFENSVKTATACCEASPS*TQQPLA
Trigger: GGCTAGGGGCTGCTGGGTGCAGGAAGGGCTTGCTTC...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR GCA 90 bp TTGCCTTGGCTTGTGGTACAGTTGAAGCCCAGGTTCTTGGCTTCAAGGCCACAGCCCCGGTTGTCATCCTaGATTAGCCTTCGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: LPWLVVQLKPRFLASRPQPRLSS*ISLRSK
Trigger: CTTGGACCGAAGGCTAATGCAGGATGACAACCGGGG...CTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCCAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR TCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAAACAGTCTGTCACTTCTaGGGCAGAGCGGAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKTVCHF*GRAEGR
Trigger: TCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGT...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR TCA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCTCTGGCCTGGAGTCTaGAGCAAGCCCTTCCTGCAC +
Preference number: 2 (lower is better)
Translates to: AEESKSFENSVKTATACCLWPGV*SKPFLH
Trigger: GTGCAGGAAGGGCTTGCTTCAGACTCCAGGCCAGAG...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR TCA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGACTTTTCTCCAGCAGTaGCAGAACTCACTGCAGACT +
Preference number: 2 (lower is better)
Translates to: AVWPEPGNINHGDPARTQTFLQQ*QNSLQT
Trigger: AGTCTGCAGTGAGTTCTGTCACTGCTGGAGAAAAGT...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR TCA 90 bp TTGGAAGGTGAGGCCAGAGGGTATAGCAAAGTCAAGGAGGTTGGCTGCAGGAAGGGCTTGTGGTACAGTTaGAGCCCAGGTTCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: LEGEARGYSKVKEVGCRKGLWYS*SPGSWL
Trigger: AAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCC...CTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCAGCGGAGGGGAGACTTaGTGTGGCTTGTCCAGCTTA +
Preference number: 2 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGSGGET*CGLSSL
Trigger: TAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCT...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GAGATGTCAGTGCTGTTGGAAGGTGAGGCCAGAGGGTATAGCAAAGTCAAGGAGCTGTCAATGTCTGTGTaGATGCGCAGGGCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: EMSVLLEGEARGYSKVKELSMSV*MRRASS
Trigger: GGAACTGGCCCTGCGCATCCACACAGACATTGACAG...CTCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAACAGCACTGACATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp TTGCCTTGGCTTGTGGTACAGTTGAAGCCCAGGTTCTTGGCTTCAAGGCCACAGTTGTCTTTGAGCCCTTaGCCTAGTCCCCGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: LPWLVVQLKPRFLASRPQLSLSP*PSPRLS
Trigger: TGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAA...CTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCCAAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp GGCTGGTCTCAAATTTACAGAGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGAAGACAGGAGGGCACATaGGAGCAGGAACAGCTATCC +
Preference number: 2 (lower is better)
Translates to: GWSQIYRDPPVSVSPVQGRQEGT*EQEQLS
Trigger: GGATAGCTGTTCCTGCTCCCATGTGCCCTCCTGTCT...TCCCTGCACTGGAGAGACTGAGACAGGTGGATCTCTGTAAATTTGAGACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR CAA 90 bp ACCATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTaGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TMETLQELSLVTTES*GAAGQTLVTFSEKS
Trigger: TGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR TCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTGGGGAGCCTGGTGTGTaGGATAAGAAAGCAGATCAG +
Preference number: 2 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAGEPGV*DKKADQ
Trigger: CTGATCTGCTTTCTTATCTCACACACCAGGCTCCCC...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR GCA 90 bp GAGATGTCAGTGCTGTTGGAAGGTGAGGCCAGAGGGTATAGCAAAGTCAAGGAGCTCCCTGACCTCTTCTaGTTGTCCCCACTCTTCCTA +
Preference number: 2 (lower is better)
Translates to: EMSVLLEGEARGYSKVKELPDLF*LSPLFL
Trigger: TAGGAAGAGTGGGGACAAGCAGAAGAGGTCAGGGAG...CTCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAACAGCACTGACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR TCA 90 bp GAGGGTATAGCAAAGTCAAGGAGGTTGGCTGCAGGAAGGTCACATCCAGGCCATGCACCTTTGAGCTCCTaGTTGTGTTGCTGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: EGIAKSRRLAAGRSHPGHAPLSS*LCCWKR
Trigger: TCTTTTCCAGCAACACAATCAGGAGCTCAAAGGTGC...ATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CCA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCTCATACCAGCACTGTaGGGTCCATATGACCCCGCA +
Preference number: 2 (lower is better)
Translates to: AEESKSFENSVKTATACCLIPAL*GPYDPA
Trigger: TGCGGGGTCATATGGACCCCACAGTGCTGGTATGAG...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GAGGGTATAGCAAAGTCAAGGAGGTTGGCTGCAGGAAGGTCACATCCAGGCCATCGCAGATTGAGCAAATaGAAGTCACAGGGCAATGGA +
Preference number: 2 (lower is better)
Translates to: EGIAKSRRLAAGRSHPGHRRLSK*KSQGNG
Trigger: TCCATTGCCCTGTGACTTCCATTTGCTCAATCTGCG...ATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR GCA 90 bp AATTGTAATTCTTGTTTCCATCTGAAGTGTGGGTTAGTGACACCAACACACTGTTCTCCCCTGTCTCTCTaGCCCCGCCGCCTGCTGATG +
Preference number: 2 (lower is better)
Translates to: NCNSCFHLKCGLVTPTHCSPLSL*PRRLLM
Trigger: CATCAGCAGGCGGCGGGGGCAGAGAGACAGGGGAGA...ACAGTGTGTTGGTGTCACTAACCCACACTTCAGATGGAAACAAGAATTACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCAGGAGGCAGTCTCTGTaGATGAACCCTGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: AEESKSFENSVKTATACCRRQSL*MNPVFR
Trigger: CCTGAAGACAGGGTTCATCCACAGAGACTGCCTCCT...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CCA 90 bp GCTAGCTTGCCTTGGCTTGTGGTACAGTTGAAGCCCAGGTTCTTGGCTTCAAGGTCCCTGATATCTACCTaGAATGACATGTCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: ASLPWLVVQLKPRFLASRSLIST*NDMSRD
Trigger: GTCTCTGGACATGTCATTCCAGGTAGATATCAGGGA...CCTTGAAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCCAAGGCAAGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR TCA 90 bp AGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGATTAAAGGTATGTGCCAACAATACCCCCTCCACTGTTaGAATCACAGGTGTACCACA +
Preference number: 2 (lower is better)
Translates to: RSTCLSLSSAGIKGMCQQYPLHC*NHRCTT
Trigger: TGTGGTACACCTGTGATTTCAACAGTGGAGGGGGTA...TTGTTGGCACATACCTTTAATCCCTGCACTGGAGAGACTGAGACAGGTGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR-3UTR CCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCTGGCAACATAAACCATaGAGACCCTGCAAGAACTCA +
Preference number: 2 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGWQHKP*RPCKNS
Trigger: TGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCA...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 90 bp TCCACTGTTGAAATCACAGGTGTACCACAACAACCAACCCCTCTCTaGCATTCTGGCTGTGAAGTCATTTCCTCTGCTGTGGTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: STVEITGVPQQPTPL*HSGCEVISSAVVCS
Trigger: AGAACACACCACAGCAGAGGAAATGACTTCACAGCCAGAATGCAAGAGAGGGGTTGGTTGTTGTGGTACACCTGTGATTTCAACAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR-3UTR CCA 90 bp ACCATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTTGGGTGCTCAAGCACAGCCCTCTTaGAAACTCTGTTTCCATTTT +
Preference number: 2 (lower is better)
Translates to: TMETLQELSLVTTESLGAQAQPS*KLCFHF
Trigger: AAAATGGAAACAGAGTTTCCAAGAGGGCTGTGCTTG...AGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR GCA 90 bp AGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGATTAAAGGTATGTGCCAACAAATGTTGCCTCAAACTTaGCATGTAGCCAGAGATGAC +
Preference number: 2 (lower is better)
Translates to: RSTCLSLSSAGIKGMCQQMLPQT*HVARDD
Trigger: GTCATCTCTGGCTACATGGCAAGTTTGAGGCAACAT...TTGTTGGCACATACCTTTAATCCCTGCACTGGAGAGACTGAGACAGGTGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR-3UTR TCA 90 bp AGTCTTGGCTTACTAAGTTTTCGTAAGGATGGAACTTTGCTTTTACCAACTCTTACTGTGGGGTCCATATaGCCCCGCAGAGCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: SLGLLSFRKDGTLLLPTLTVGSI*PRRASS
Trigger: TGAGCTTGCTCTGCGGGGTCATATGGACCCCACAGT...AAGAGTTGGTAAAAGCAAAGTTCCATCCTTACGAAAACTTAGTAAGCCAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR TCA 90 bp AATTGTAATTCTTGTTTCCATCTGAAGTGTGGGTTAGTGACACCAACACACTGTATTTTGGGAAAAGGATaGAGCCTGAGTTGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: NCNSCFHLKCGLVTPTHCILGKG*SLSCAQ
Trigger: CTGGGCACAACTCAGGCTTCATCCTTTTCCCAAAAT...ACAGTGTGTTGGTGTCACTAACCCACACTTCAGATGGAAACAAGAATTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR GCA 72 bp GTGGCCTCTGGCCTGGAGTCTGAAGCAAGCCCTTCCTaGACCCAGCAGCCCCTAGCCAGGGCATGCAGGCCC +
Preference number: 3 (lower is better)
Translates to: VASGLESEASPS*TQQPLARACRP
Trigger: GGGCCTGCATGCCCTGGCTAGGGGCTGCTGGGTGCAGGAAGGGCTTGCTTCAGACTCCAGGCCAGAGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CCA 72 bp GAGCTCCAGTGCACACTGATCTGCACAGACAGGGGCTaGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAG +
Preference number: 3 (lower is better)
Translates to: ELQCTLICTDRG*PSSERTRTRGE
Trigger: CTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CAA 90 bp CATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGCACAGACAGGGGCTGGCCCGCACCCGGGGCGAGTaGACCAGCAGGGACACCACA +
Preference number: 3 (lower is better)
Translates to: HVRSRAPVHTDLHRQGLARTRGE*TSRDTT
Trigger: TGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCG...GGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR TCA 72 bp CACACCCAGGCCCAGGCCTGGCAGGCGGACGGGTACTaGCACCTGGTAGACATCAGGGACCATGTCCGTAGC +
Preference number: 3 (lower is better)
Translates to: HTQAQAWQADGY*HLVDIRDHVRS
Trigger: GCTACGGACATGGTCCCTGATGTCTACCAGGTGTCAGTACCCGTCCGCCTGCCAGGCCTGGGCCTGGGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR TCA 72 bp GTGCCTGAAGTGTTCCGTGGCCTCTGGCCTGGAGTCTaGAGCAAGCCCTTCCTGCACCCAGCAGCCCCTAGC +
Preference number: 3 (lower is better)
Translates to: VPEVFRGLWPGV*SKPFLHPAAPS
Trigger: GCTAGGGGCTGCTGGGTGCAGGAAGGGCTTGCTTCAGACTCCAGGCCAGAGGCCACGGAACACTTCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CCA 72 bp AGCTGGCCATTACCGAGGCTGGAGACACCCAGAGCCTaGGCAGTGTGCAGCGTGAGGCGCCTCTGGGAATCT +
Preference number: 3 (lower is better)
Translates to: SWPLPRLETPRA*AVCSVRRLWES
Trigger: AGATTCCCAGAGGCGCCTCACGCTGCACACTGCCCAGGCTCTGGGTGTCTCCAGCCTCGGTAATGGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 72 bp AGCGGGCAGGTAATACTTCTGCAGGTGGGATACGAGTaGACCTCCTCAGCCCACCAGGGGCCCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: SGQVILLQVGYE*TSSAHQGPQHR
Trigger: CCTGTGCTGGGGCCCCTGGTGGGCTGAGGAGGTTCACTCGTATCCCACCTGCAGAAGTATTACCTGCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp GCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTaGCTGCCTGCTGACGGACAGTTTCACGCCGTTCAG +
Preference number: 3 (lower is better)
Translates to: AGAGVHNTDREC*LPADGQFHAVQ
Trigger: CTGAACGGCGTGAAACTGTCCGTCAGCAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR GCA 72 bp GCCGCCGGGCAGTTTCTGACTGAGGGGATCAGAGCCTaGTCTGTCCGATGCTTTGGGCGCCTTCGCTTACTG +
Preference number: 3 (lower is better)
Translates to: AAGQFLTEGIRA*SVRCFGRLRLL
Trigger: CAGTAAGCGAAGGCGCCCAAAGCATCGGACAGAGCAGGCTCTGATCCCCTCAGTCAGAAACTGCCCGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp CCCGCAGAGCAAGCTCATACCTGCAGTCTCCTAGCGTaGGGTTGTCCCCCAGCCTCCCTGACCTCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PAEQAHTCSLLA*GCPPASLTSSA
Trigger: AGCAGAAGAGGTCAGGGAGGCTGGGGGACAACCTCACGCTAGGAGACTGCAGGTATGAGCTTGCTCTGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR TCA 72 bp AAGCCCTGGCCTAGCCCAAGCGCAGGCGGAAGGTGCTaGTCTCCATGGGCTCCAGAGAGATGTCAGTGCTGT +
Preference number: 3 (lower is better)
Translates to: KPWPSPSAGGRC*SPWAPERCQCC
Trigger: ACAGCACTGACATCTCTCTGGAGCCCATGGAGATCAGCACCTTCCGCCTGCGCTTGGGCTAGGCCAGGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR GCA 72 bp AGAGGGTGGAAAGAGCGCAGAGCAGGGCTAGTGCCCTaGCTCTTGGCCACGGGTAAGACAAGAGGAGGTGTG +
Preference number: 3 (lower is better)
Translates to: RGWKERRAGLVP*LLATGKTRGGV
Trigger: CACACCTCCTCTTGTCTTACCCGTGGCCAAGAGGCAGGGCACTAGCCCTGCTCTGCGCTCTTTCCACCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 72 bp GGCATGCAGGCCCAGTGGCACTCAGAGCAGGCCCAGTaGCACTCAGAACAGAGCCAGAGCAGAAAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: GMQAQWHSEQAQ*HSEQSQSRKQQ
Trigger: TTGCTGCTTTCTGCTCTGGCTCTGTTCTGAGTGCCACTGGGCCTGCTCTGAGTGCCACTGGGCCTGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CCA 72 bp TCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATaGCTTACACGGCTGTCATCCATTTGGAGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SSRITVRSGRAS*LTRLSSIWRKG
Trigger: ACCCTTCCTCCAAATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CAA 90 bp AATCTCTGTGAGTCAGGTGACAGACAGGAGGGCACATGGGAGCAGGAACAGCTACGCACCCGGGGCGAGTaGACCAGCAGGGACACCACA +
Preference number: 3 (lower is better)
Translates to: NLCESGDRQEGTWEQEQLRTRGE*TSRDTT
Trigger: TGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCG...TAGCTGTTCCTGCTCCCATGTGCCCTCCTGTCTGTCACCTGACTCACAGAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR CCA 72 bp TCCTGCATTAGCCTTCGGTCCAAGATCACCTCCAGCTaGCCATTACCGAGGCTGGAGACACCCAGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: SCISLRSKITSS*PLPRLETPRAW
Trigger: CCAGGCTCTGGGTGTCTCCAGCCTCGGTAATGGCCAGCTGGAGGTGATCTTGGACCGAAGGCTAATGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 72 bp AAGGAGGTTGGCTGCAGGAAGGTCACATCCAGGCCATaGAAGAGGCTCCCCAGGGCTAGCTTGCCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: KEVGCRKVTSRP*KRLPRASLPWL
Trigger: AAGCCAAGGCAAGCTAGCCCTGGGGAGCCTCTTCCATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CAA 90 bp CGAGTTGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAAACGGCTGTCATCCATTaGGAGGAAGGGTGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: RVDQQGHHTEPLLFQRVKTAVIH*EEGCPR
Trigger: CCTGGGACACCCTTCCTCCAAATGGATGACAGCCGT...TTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR-3UTR CAA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGGCGCCTCTGGGAATCTaGGATATAGGCCATGACTGG +
Preference number: 3 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLAPLGI*DIGHDW
Trigger: CCAGTCATGGCCTATATCCAAGATTCCCAGAGGCGC...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 72 bp CGGGCAAGGTGTCCTCGGCTGGGAGCATGCGCAGATTaGGCAAATGGAAGTCACAGGGCAATGGAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: RARCPRLGACAD*ANGSHRAMEKP
Trigger: TGGCTTCTCCATTGCCCTGTGACTTCCATTTGCTCAATCTGCGCATGCTCCCAGCCGAGGACACCTTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 72 bp CTTCAAGGCCACAGTCAAACCCCTTGCGGTGTAAGATaGGCGCAGAGTCAGTTGCGGGCAAGGTGTCCTCGG +
Preference number: 3 (lower is better)
Translates to: LQGHSQTPCGVR*AQSQLRARCPR
Trigger: CCGAGGACACCTTGCCCGCAACTGACTCTGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 72 bp GAGCGCAGAGTCAGTTGCGGGCAAGGTGTCCTCGGCTaGGAGCATGCGCAGATTGAGCAAATGGAAGTCACA +
Preference number: 3 (lower is better)
Translates to: ERRVSCGQGVLG*EHAQIEQMEVT
Trigger: TGTGACTTCCATTTGCTCAATCTGCGCATGCTCCCAGCCGAGGACACCTTGCCCGCAACTGACTCTGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CAA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGTGGCCTAGTCCCCGGTaGTCATCCTGCATTAGCCTT +
Preference number: 3 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRWPSPR*SSCISL
Trigger: AAGGCTAATGCAGGATGACAACCGGGGACTAGGCCA...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR GCA 72 bp GAGGCCAGAGGGTATAGCAAAGTCAAGGAGGTTGGCTaGAGGAAGGTCACATCCAGGCCATGGAAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: EARGYSKVKEVG*RKVTSRPWKRL
Trigger: GAGCCTCTTCCATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTCTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CAA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGCGGTTGCAGGTGATCTaGTTGTCTTTGAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRRLQVI*LSLSPW
Trigger: CCAAGGGCTCAAAGACAACAAGATCACCTGCAACCG...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR GCA 72 bp TTTCCTCTGCTGTGGTGTGTTCTCTGCCACACGTGCTaGCTAACCACAGGCCCAAAAGCAATCGGTCTGCCT +
Preference number: 3 (lower is better)
Translates to: FPLLWCVLCHTC*LTTGPKAIGLP
Trigger: AGGCAGACCGATTGCTTTTGGGCCTGTGGTTAGGCAGCACGTGTGGCAGAGAACACACCACAGCAGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR CCA 72 bp CCAGTTTGGAGAAAAAGCCAGGCTCTGGGCTCATTGTaGTCCGACGTTCTAACAGGAGGCGGAAACGGTTGC +
Preference number: 3 (lower is better)
Translates to: PVWRKSQALGSL*SDVLTGGGNGC
Trigger: GCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGCCTGGCTTTTTCTCCAAACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 72 bp AATCTCTGTGAGTCAGGTGACAGACAGGAGGGCACATaGGAGCAGGAACAGCTATCCACAAGCCCCCTGACA +
Preference number: 3 (lower is better)
Translates to: NLCESGDRQEGT*EQEQLSTSPLT
Trigger: TGTCAGGGGGCTTGTGGATAGCTGTTCCTGCTCCCATGTGCCCTCCTGTCTGTCACCTGACTCACAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR-3UTR CAA 90 bp CGGAAACGGTTGCAGGTGATCTTGTTGTCTTTGAGCCCTTGGCCTAGTCCCCGGTTGTCCAGCTTAGTCTaGGTGTTAGGAGGCAGTCTC +
Preference number: 3 (lower is better)
Translates to: RKRLQVILLSLSPWPSPRLSSLV*VLGGSL
Trigger: GAGACTGCCTCCTAACACCAAGACTAAGCTGGACAA...CCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 72 bp CATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTaGGTCTTTGGGTGCTGCTGGACAGACCCTAGTGAC +
Preference number: 3 (lower is better)
Translates to: HGDPARTQPCHY*VFGCCWTDPSD
Trigger: GTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR GCA 72 bp TCATTTCCTCTGCTGTGGTGTGTTCTCTGCCACACGTaGTGCCTAACCACAGGCCCAAAAGCAATCGGTCTG +
Preference number: 3 (lower is better)
Translates to: SFPLLWCVLCHT*CLTTGPKAIGL
Trigger: CAGACCGATTGCTTTTGGGCCTGTGGTTAGGCAGCACGTGTGGCAGAGAACACACCACAGCAGAGGAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR CCA 72 bp GTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTCTGTaGATGAACCCTGTCTTCAGGCCACAAGAAGCCCTG +
Preference number: 3 (lower is better)
Translates to: VQLSLGVRRQSL*MNPVFRPQEAL
Trigger: CAGGGCTTCTTGTGGCCTGAAGACAGGGTTCATCCACAGAGACTGCCTCCTAACACCAAGACTAAGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR CCA 72 bp AGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTaGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGA +
Preference number: 3 (lower is better)
Translates to: SLSLLRQSGGET*CGLSSLVLVLG
Trigger: TCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR CCA 72 bp GAGGCGCCTCTGGGAATCTTGGATATAGGCCATGACTaGCATAGGGTAGAAATTAGCCTGCAGGGGCAGCTT +
Preference number: 3 (lower is better)
Translates to: EAPLGILDIGHD*HRVEISLQGQL
Trigger: AAGCTGCCCCTGCAGGCTAATTTCTACCCTATGCCAGTCATGGCCTATATCCAAGATTCCCAGAGGCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CAA 90 bp GAGGGTATAGCAAAGTCAAGGAGGTTGGCTGCAGGAAGGTCACATCCAGGCCATAGGAGGCGGAAACGGTaGCAGGTGATCTTGTTGTCT +
Preference number: 3 (lower is better)
Translates to: EGIAKSRRLAAGRSHPGHRRRKR*QVILLS
Trigger: AGACAACAAGATCACCTGCAACCGTTTCCGCCTCCT...ATGGCCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGCTATACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 72 bp GGATGCGCAGGGCCAGTTCCTTGTTCACATAGTCCCTaGTATCTACCTGGAATGACATGTCCAGAGACAGCC +
Preference number: 3 (lower is better)
Translates to: GCAGPVPCSHSP*YLPGMTCPETA
Trigger: GGCTGTCTCTGGACATGTCATTCCAGGTAGATATCAGGGACTATGTGAACAAGGAACTGGCCCTGCGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR-3UTR CAA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGACTGATGTTTATGGGTaGATTTGGGGAGAACCAGTC +
Preference number: 3 (lower is better)
Translates to: AVWPEPGNINHGDPARTQTDVYG*IWGEPV
Trigger: GACTGGTTCTCCCCAAATCAACCCATAAACATCAGT...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CAA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTTGTCCAGCTTAGTCTaGGTGTTAGGAGGCAGTCTC +
Preference number: 3 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRALSSLV*VLGGSL
Trigger: GAGACTGCCTCCTAACACCAAGACTAAGCTGGACAA...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR-3UTR CAA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTCATGACCTCCTAATTTaGTCTCTGCCTTCCTCGTCC +
Preference number: 3 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSHDLLI*SLPSSS
Trigger: GGACGAGGAAGGCAGAGACAAAATTAGGAGGTCATG...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp CCTACCCCTGTCACAGATCAACACCAAATGATCAGCTaGGAACTAGTGCTAGTGCCTGAAGTGTTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: PTPVTDQHQMIS*ELVLVPEVFRG
Trigger: GCCACGGAACACTTCAGGCACTAGCACTAGTTCTCAGCTGATCATTTGGTGTTGATCTGTGACAGGGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp TTCCTTGTTCACATAGTCCCTGATATCTACCTGGAATaGCATGTCCAGAGACAGCCCCTCTACCCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: FLVHIVPDIYLE*HVQRQPLYPWQ
Trigger: CTGCCAGGGGTAGAGGGGCTGTCTCTGGACATGTCATTCCAGGTAGATATCAGGGACTATGTGAACAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CCA 72 bp AAACGGTTGCAGGTGATCTTGTTGTCTTTGAGCCCTTaGCCTAGTCCCCGGTTGTCATCCTGCATTAGCCTT +
Preference number: 3 (lower is better)
Translates to: KRLQVILLSLSP*PSPRLSSCISL
Trigger: AAGGCTAATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR TCA 72 bp TCTTCCTACATCCCATTTTGGGAAAAGGATGAAGCCTaGGTTGTGCCCAGCTGGGTACCTACTCACAGCCTA +
Preference number: 3 (lower is better)
Translates to: SSYIPFWEKDEA*VVPSWVPTHSL
Trigger: TAGGCTGTGAGTAGGTACCCAGCTGGGCACAACTCAGGCTTCATCCTTTTCCCAAAATGGGATGTAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR GCA 72 bp AAATCACAGGTGTACCACAACAACCAACCCCTCTCTTaGATTCTGGCTGTGAAGTCATTTCCTCTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: KSQVYHNNQPLS*ILAVKSFPLLW
Trigger: CCACAGCAGAGGAAATGACTTCACAGCCAGAATGCAAGAGAGGGGTTGGTTGTTGTGGTACACCTGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR TCA 72 bp TCCAACCTCGTGGGAATTACACTGATGTTTATGGGTTaGTTTGGGGAGAACCAGTCGTTACAGGGCAACTCA +
Preference number: 3 (lower is better)
Translates to: SNLVGITLMFMG*FGENQSLQGNS
Trigger: TGAGTTGCCCTGTAACGACTGGTTCTCCCCAAATCAACCCATAAACATCAGTGTAATTCCCACGAGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CCA 72 bp AGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTaGAAACTCTGTTTCCATTTTAGAGAAAGGAATCCT +
Preference number: 3 (lower is better)
Translates to: RMPSQDTQAQPS*KLCFHFRERNP
Trigger: AGGATTCCTTTCTCTAAAATGGAAACAGAGTTTCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CCA 72 bp CCTCGTGGGAATTACACTGATGTTTATGGGTTGATTTaGGGAGAACCAGTCGTTACAGGGCAACTCACAGAA +
Preference number: 3 (lower is better)
Translates to: PRGNYTDVYGLI*GEPVVTGQLTE
Trigger: TTCTGTGAGTTGCCCTGTAACGACTGGTTCTCCCCAAATCAACCCATAAACATCAGTGTAATTCCCACGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp AGTTCCAGAAAGTGTCCAACCTCGTGGGAATTACACTaGTGTTTATGGGTTGATTTGGGGAGAACCAGTCGT +
Preference number: 3 (lower is better)
Translates to: SSRKCPTSWELH*CLWVDLGRTSR
Trigger: ACGACTGGTTCTCCCCAAATCAACCCATAAACATCAGTGTAATTCCCACGAGGTTGGACACTTTCTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR GCA 72 bp CAAAACACACTTTTCTCCAGCAGTGACAGAACTCACTaGAGACTCGTTTCCACCCACACAGCTGTATTGATT +
Preference number: 3 (lower is better)
Translates to: QNTLFSSSDRTH*RLVSTHTAVLI
Trigger: AATCAATACAGCTGTGTGGGTGGAAACGAGTCTGCAGTGAGTTCTGTCACTGCTGGAGAAAAGTGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp TTGATTGAAGCAAAAACGAAGGTTCATCCAAGCACATaGCCTCCTAATTTTGTCTCTGCCTTCCTCGTCCAC +
Preference number: 3 (lower is better)
Translates to: LIEAKTKVHPST*PPNFVSAFLVH
Trigger: GTGGACGAGGAAGGCAGAGACAAAATTAGGAGGTCATGTGCTTGGATGAACCTTCGTTTTTGCTTCAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp CTCACTGCAGACTCGTTTCCACCCACACAGCTGTATTaGTTTAACCTGTTTCCTATAGCATGCTTTCAAGCT +
Preference number: 3 (lower is better)
Translates to: LTADSFPPTQLY*FNLFPIACFQA
Trigger: AGCTTGAAAGCATGCTATAGGAAACAGGTTAAATCAATACAGCTGTGTGGGTGGAAACGAGTCTGCAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR TCA 72 bp CAACTCTTATCATTTATAGACAGATTCTCTATTGATTaGAGCAAAAACGAAGGTTCATCCAAGCACATGACC +
Preference number: 3 (lower is better)
Translates to: QLLSFIDRFSID*SKNEGSSKHMT
Trigger: GGTCATGTGCTTGGATGAACCTTCGTTTTTGCTTCAATCAATAGAGAATCTGTCTATAAATGATAAGAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GGAACAGCTATCCACAAGCCCCCTGACACCCATGCCTTCCTCTGGCCCCTCCCCGTAGGGCAGCAGGGCTaGCGGGCCCTCCGCATTGGC +
Preference number: 4 (lower is better)
Translates to: GTAIHKPPDTHAFLWPLPVGQQG*RALRIG
Trigger: GCCAATGCGGAGGGCCCGCCAGCCCTGCTGCCCTAC...GGGGAGGGGCCAGAGGAAGGCATGGGTGTCAGGGGGCTTGTGGATAGCTGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
3UTR CAA 72 bp TGGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAGTaGACCAGCAGGGACACCACACTGAGCCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WPSSERTRTRGE*TSRDTTLSRSC
Trigger: ACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp CTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGCTGACGGACCAGCACAGGAAACCCTaGAGGCCGGGCACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LAPESTTRTGNADCLLTDQHRKP*RPGTRL
Trigger: GAGCCTGGTGCCCGGCCTCCAGGGTTTCCTGTGCTG...GTCCGTCAGCAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GACGCGCACCCGGGGCGAGTTGACCAGCAGGGACACCACACTGAGCCGCTCCTGATGGCATCGTGGTGCTaGAAGAGGCCCAGTGTACGC +
Preference number: 4 (lower is better)
Translates to: DAHPGRVDQQGHHTEPLLMASWC*KRPSVR
Trigger: GCGTACACTGGGCCTCTTCCAGCACCACGATGCCAT...CAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp GGTACCTACTCACAGCCTAGGGCAAGGGCCTCCTCTCCCCTGTCTCTCTGCCCCCGCCGGGGGTCTTCCTaGAGCTTGGACACCATGCTG +
Preference number: 4 (lower is better)
Translates to: GTYSQPRARASSPLSLCPRRGSS*SLDTML
Trigger: CAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCG...GGGGCAGAGAGACAGGGGAGAGGAGGCCCTTGCCCTAGGCTGTGAGTAGGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ATCTGCACAGACAGGGGCTGGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAGACTGGCAGCAGATCTTaGGATCGGGGCCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: ICTDRGWPSSERTRTRGETGSRS*DRGHRC
Trigger: ACACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGT...CTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCAGCCCCTGTCTGTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp AGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCCCCGTGATGGCATCGTaGTGCTGGAAGAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RSPAGSPCARAGHHGLHGPVMAS*CWKRPS
Trigger: ACTGGGCCTCTTCCAGCACCACGATGCCATCACGGG...GCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp GGTACCTACTCACAGCCTAGGGCAAGGGCCTCCTCTCCCCTGTCTCTCTGCCCCACGGACAGGGAATGCTaGCTGCCTGCTGACGGACAG +
Preference number: 4 (lower is better)
Translates to: GTYSQPRARASSPLSLCPTDREC*LPADGQ
Trigger: CTGTCCGTCAGCAGGCAGTCAGCATTCCCTGTCCGT...GGGGCAGAGAGACAGGGGAGAGGAGGCCCTTGCCCTAGGCTGTGAGTAGGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp TCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCTGTCACTCTCCAGCCACTGGTaGCCCTCGATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSRITVRSGRASWLTRLSLSSHW*PSMSWS
Trigger: TGACCAGCTCATCGAGGGGCACCAGTGGCTGGAGAG...TGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAAAGGGGTCCACTaGCCAGCCCGAGCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLSKGVH*PARARG
Trigger: ACCCCGCGCTCGGGCTGGGCAGTGGACCCCTTTGGA...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCTGTCATCCATTAGACGGAGAAGAAGCTaGGCCGGGGCTCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RITVRSGRASWLTRLSSIRRRRS*AGAPGA
Trigger: TGCTCCCGGAGCCCCGGCCCAGCTTCTTCTCCGTCT...AATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GGTACCTACTCACAGCCTAGGGCAAGGGCCTCCTCTCCCCTGTCTCTCTGCCCCCCCGTGATGGCATCGTaGTGCTGGAAGAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GTYSQPRARASSPLSLCPPVMAS*CWKRPS
Trigger: ACTGGGCCTCTTCCAGCACCACGATGCCATCACGGG...GGGGCAGAGAGACAGGGGAGAGGAGGCCCTTGCCCTAGGCTGTGAGTAGGTACC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGAGGGCCCATCGAGATCTaGCTGCAGCTGCAGCACACC +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGGPIEI*LQLQHT
Trigger: GGTGTGCTGCAGCTGCAGCCAGATCTCGATGGGCCC...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp CTGGTAGACATCAGGGACCATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGTCCAAAGGGGTCCACTaGCCAGCCCGAGCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LVDIRDHVRSRAPVHTDLSKGVH*PARARG
Trigger: ACCCCGCGCTCGGGCTGGGCAGTGGACCCCTTTGGA...CAGATCAGTGTGCACTGGAGCTCGGCTACGGACATGGTCCCTGATGTCTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp AGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCGTGATGGCATCGTGGTaGTGGAAGAGGCCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: RSPAGSPCARAGHHGLHGVMASW*WKRPSV
Trigger: TACACTGGGCCTCTTCCAGCACCACGATGCCATCAC...GCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGAGCATGCTGGTCAGGTTaGCACGGCGCAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGACWSG*HGAAGK
Trigger: CTTACCTGCTGCGCCGTGCCAACCTGACCAGCATGC...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCTGGGCATCCCATTCCTaGGGCTTGTCATACCGGAAG +
Preference number: 4 (lower is better)
Translates to: RSPAGSPCARAGHHGLHGWASHS*GLSYRK
Trigger: CTTCCGGTATGACAAGCCCCAGGAATGGGATGCCCA...GCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGGCAGCAGGTAAGGCATaGTGGAGCTGTGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AKSLAPESTTRTGNADCLAAGKA*WSCVQR
Trigger: CCTTTGGACACAGCTCCACCATGCCTTACCTGCTGC...CAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GGTACCTACTCACAGCCTAGGGCAAGGGCCTCCTCTCCCCTGTCTCTCTGCCCCTGGGCATCCCATTCCTaGGGCTTGTCATACCGGAAG +
Preference number: 4 (lower is better)
Translates to: GTYSQPRARASSPLSLCPWASHS*GLSYRK
Trigger: CTTCCGGTATGACAAGCCCCAGGAATGGGATGCCCA...GGGGCAGAGAGACAGGGGAGAGGAGGCCCTTGCCCTAGGCTGTGAGTAGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTGGGCAGTGTGCAGCGTaGGGCGCCTCTGGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCGQCAA*GASGNL
Trigger: AAGATTCCCAGAGGCGCCTCACGCTGCACACTGCCC...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp GAGTTGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATCGCCGGGGGTCTTCCTaGAGCTTGGACACCATGCTG +
Preference number: 4 (lower is better)
Translates to: ELTSRDTTLSRSCSSGLNRRGSS*SLDTML
Trigger: CAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCG...ATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp AAGGCCGGAGAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCGCACGAGGAGGACGTTaGTTCGGAACAGCCGGGACT +
Preference number: 4 (lower is better)
Translates to: KAGEPDLHVAIADGEVAGARGGR*FGTAGT
Trigger: AGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGC...GCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGAGTCAAGGAGGTTGGCTaGAGGAAGGTCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGVKEVG*RKVTSR
Trigger: CCTGGATGTGACCTTCCTGCAGCCAACCTCCTTGAC...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCTGTCATCCATTTGCATGCTGGTCAGGTTaGCACGGCGCAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GSPCARAGHHGLHGCHPFACWSG*HGAAGK
Trigger: CTTACCTGCTGCGCCGTGCCAACCTGACCAGCATGC...AAATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp ACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCGACTTCTTCCGGTACTaGTCCAGGAGCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSRDTTLSRSCSSGLNTTDFFRY*SRSRAA
Trigger: GGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTC...GGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGAGAGAGGGTCCCAAACTaGGCCTGCACATGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGERVPN*ACTWNS
Trigger: TGAGTTCCATGTGCAGGCCCAGTTTGGGACCCTCTC...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCTGTCATCCATTATGGCATCGTGGTGCTaGAAGAGGCCCAGTGTACGC +
Preference number: 4 (lower is better)
Translates to: RITVRSGRASWLTRLSSIMASWC*KRPSVR
Trigger: GCGTACACTGGGCCTCTTCCAGCACCACGATGCCAT...AATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTGAGACACCCAGAGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCTCTGGGTGTCTC...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGGGAGAAGCCAGAGGGTaGAAAGAGCGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLGEARG*KERRAG
Trigger: CCCTGCTCTGCGCTCTTTCCACCCTCTGGCTTCTCC...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp GCGGGCAAGGTGTCCTCGGCTGGGAGCATGCGCAGATaGAGCAAATGGAAGTCACAGGGCAATGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AGKVSSAGSMRR*SKWKSQGNGEA
Trigger: GGCTTCTCCATTGCCCTGTGACTTCCATTTGCTCAATCTGCGCATGCTCCCAGCCGAGGACACCTTGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
CDS-3UTR TCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGATGGACACCATGCTGTTaGGGATGTGCTGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGWTPCC*GCAGSV
Trigger: AACAGACCCAGCACATCCTCAACAGCATGGTGTCCA...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp CATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGCACAGACAGGGGCTGGCCTGTCTGGCAGGATCATaGTGCACTCGGTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: HVRSRAPVHTDLHRQGLACLAGS*CTRSSI
Trigger: TATGCTGGACCGAGTGCAGCATGATCCTGCCAGACA...GGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp CATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGCACAGACAGGGGCTGGCCCAGCCTTCGAACTGCTaGCCTCTTTTGGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: HVRSRAPVHTDLHRQGLAQPSNC*PLLGTD
Trigger: ATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCTG...GGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GGAAGACTGCAGCGTGTAGGGCCCATCGAGATCTGGCTGCAGCTGCAGCACACCACTGCTGCCCTCTTTTaGGCACTGATGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GRLQRVGPIEIWLQLQHTTAALF*ALMLSH
Trigger: GTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGT...GGTGTGCTGCAGCTGCAGCCAGATCTCGATGGGCCCTACACGCTGCAGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp CCAGGCTCTGGGCTCATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTTGCGCCACTCTTGTCCTTaGAGGTACGGGTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: PGSGLIVVRRSNRRRKRLRHSCP*RYGCRR
Trigger: TCTACGGCACCCGTACCTCCAAGGACAAGAGTGGCG...CAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
CDS-3UTR CCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGAAGATGTCAGTGCTGTTaGAAGGTGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGRCQCC*KVRPEG
Trigger: ACCCTCTGGCCTCACCTTCCAACAGCACTGACATCT...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp CTGGCCTGGCCCTTTACCTTGAGAAGCCCAGTAAGGCCGGAGAACCAGACCTGCACATCTGCCTCCACATaGACTCCAGGCTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: LAWPFTLRSPVRPENQTCTSAST*TPGYEW
Trigger: CCACTCATAGCCTGGAGTTCATGTGGAGGCAGATGT...GCAGGTCTGGTTCTCCGGCCTTACTGGGCTTCTCAAGGTAAAGGGCCAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp CTGGCCTGGCCCTTTACCTTGAGAAGCCCAGTAAGGCCGGAGAACCAGACCTGCCACCCGGCAGACGTTTaGAATCAAACTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LAWPFTLRSPVRPENQTCHPADV*NQTGSR
Trigger: TCTGCTGCCAGTTTGATTTCAAACGTCTGCCGGGTG...GCAGGTCTGGTTCTCCGGCCTTACTGGGCTTCTCAAGGTAAAGGGCCAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGCCTTCCAAGGGCAATTaGTTCTCCCACCCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AVWPEPGNINHGDPARTQPSKGN*FSHPAD
Trigger: GTCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGG...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp TTGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCCCTTCCAAGGGCAATTaGTTCTCCCACCCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LTSRDTTLSRSCSSGLNTPSKGN*FSHPAD
Trigger: GTCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGG...GGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAAGCACCCGGGGCGAGTTaGCCAGCAGGGACACCACAC +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKAPGAS*PAGTPH
Trigger: GTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGC...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTCCCTCTGAATCAGCATaGTGGTCAGGTTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCPSESA*WSGWHG
Trigger: GCCGTGCCAACCTGACCAGCATGCTGATTCAGAGGG...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTAGAGCCTGGGCAGTGTaGAGCGTGAGGCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRARAWAV*SVRRLW
Trigger: CCAGAGGCGCCTCACGCTGCACACTGCCCAGGCTCT...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CATGTAGCGATTGCTGATGGCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACCACCATTCTGGTGTCTaGCAGGATCATGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: HVAIADGEVAGAGVHNTDHHSGV*QDHAAL
Trigger: GAGTGCAGCATGATCCTGCCAGACACCAGAATGGTG...GTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCCATCAGCAATCGCTACATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp AGGGGCCCCAGCACAGGATGCCTTCCCAAGACACCCAAGCACAGCCCTCTTGGACAGAGATTTGGCTCCTaGGGAAGTTCCCACCATTCT +
Preference number: 4 (lower is better)
Translates to: RGPSTGCLPKTPKHSPLGQRFGS*GSSHHS
Trigger: AGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTG...TCCAAGAGGGCTGTGCTTGGGTGTCTTGGGAAGGCATCCTGTGCTGGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTACTGGCAGCAGATCTTaGGATCGGGGCCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCTGSRS*DRGHRC
Trigger: ACACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGT...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CATGTAGCGATTGCTGATGGCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACTGTAATAGCCCGGGGTaGCACCTTCCAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: HVAIADGEVAGAGVHNTDCNSPG*HLPRAI
Trigger: AATTGCCCTTGGAAGGTGCCACCCCGGGCTATTACA...GTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCCATCAGCAATCGCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp ACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCGAGAGGGTCCCAAACTaGGCCTGCACATGGAACTCA +
Preference number: 4 (lower is better)
Translates to: TSRDTTLSRSCSSGLNTTERVPN*ACTWNS
Trigger: TGAGTTCCATGTGCAGGCCCAGTTTGGGACCCTCTC...GGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCCAGCACAGGAAACCCTaGAGGCCGGGCACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFQHRKP*RPGTRL
Trigger: GAGCCTGGTGCCCGGCCTCCAGGGTTTCCTGTGCTG...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCACAAACCTGGGTCCCGTGATGGCATCGTaGTGCTGGAAGAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TTLSRSCSSGLNTTTNLGPVMAS*CWKRPS
Trigger: ACTGGGCCTCTTCCAGCACCACGATGCCATCACGGG...ACCCAGGTTTGTGGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
3UTR CAA 72 bp AGAGCAAGCTCATACCTGCAGTCTCCTAGCGTGAGGTaGTCCCCCAGCCTCCCTGACCTCTTCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RASSYLQSPSVR*SPSLPDLFCLS
Trigger: GGACAAGCAGAAGAGGTCAGGGAGGCTGGGGGACAACCTCACGCTAGGAGACTGCAGGTATGAGCTTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
3UTR CAA 72 bp CCCAGGTTCTTGGCTTCAAGGCCACAGTCAAACCCCTaGCGGTGTAAGATGAGCGCAGAGTCAGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PRFLASRPQSNP*RCKMSAESVAG
Trigger: GCCCGCAACTGACTCTGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
CDS-3UTR TCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAAGCAGGGACACCACACTaGGCCGCTCCTGTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKAGTPH*AAPVPA
Trigger: CGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGC...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGGTACACAGCCACCTCTaGGAAGAAAGGGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRVHSHL*EERAFG
Trigger: ACCGAAGGCCCTTTCTTCTCAGAGGTGGCTGTGTAC...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
CDS-3UTR GCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTGTCGCAATCTCCAGCTaGCCATTTCCCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCVAISS*PFPTSL
Trigger: AAGGCTGGTGGGAAATGGGCAGCTGGAGATTGCGAC...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp ACCATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGCACAGACAGGGGCTGGTCTGAATCCCACATCTaGCTCCACATGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: TMSVAELQCTLICTDRGWSESHI*LHMNSR
Trigger: CCTGGAGTTCATGTGGAGGCAGATGTGGGATTCAGA...CCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp AAGGCCGGAGAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCCAGGGCTGCCCTGTCTaGCACATTGGCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KAGEPDLHVAIADGEVAGQGCPV*HIGFCN
Trigger: ATTACAGAAGCCAATGTGGCAGACAGGGCAGCCCTG...GCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp ACCATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTTGGGTGCTGTCCAGGAGCAGGGCTaGCCTGTCTGCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: TMETLQELSLVTTESLGAVQEQG*PVCHIG
Trigger: GCCAATGTGGCAGACAGGGCAGCCCTGCTCCTGGAC...AGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCACAAACCTGGGTTTTCTCTCCAGCCACTaGTGCCCCTCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTLSRSCSSGLNTTTNLGFLSSH*CPSMSW
Trigger: CCAGCTCATCGAGGGGCACCAGTGGCTGGAGAGAAA...ACCCAGGTTTGTGGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp CTGGTAGACATCAGGGACCATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGTCTGAATCAGCATGCTaGTCAGGTTGGCACGGCGCA +
Preference number: 4 (lower is better)
Translates to: LVDIRDHVRSRAPVHTDLSESAC*SGWHGA
Trigger: TGCGCCGTGCCAACCTGACCAGCATGCTGATTCAGA...CAGATCAGTGTGCACTGGAGCTCGGCTACGGACATGGTCCCTGATGTCTACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGGGGGCCACAGGTGTGTaGAACGTCGTAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AVWPEPGNINHGDPARTQGATGV*NVVAVE
Trigger: TTCTACAGCTACGACGTTCCACACACCTGTGGCCCC...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp TTGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCGGGGCCACAGGTGTGTaGAACGTCGTAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LTSRDTTLSRSCSSGLNTGATGV*NVVAVE
Trigger: TTCTACAGCTACGACGTTCCACACACCTGTGGCCCC...GGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp TGGCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCCGTTTGAAATCAAACTaGCAGCAGATCTTGGGATCG +
Preference number: 4 (lower is better)
Translates to: WRSRWRRSPQHGQGMLTARLKSN*QQILGS
Trigger: CGATCCCAAGATCTGCTGCCAGTTTGATTTCAAACG...GGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTGGCCATTACCGAGGCTaGAGACACCCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAGHYRG*RHPEPG
Trigger: CCCAGGCTCTGGGTGTCTCCAGCCTCGGTAATGGCC...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp CTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTaGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LLRQSGGETWCG*SSLVLVLGGSL
Trigger: GAGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
CDS-3UTR TCA 90 bp AAGGCCGGAGAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCATGAACTCCAGGCTATaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KAGEPDLHVAIADGEVAGMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACTCATAGCCTGGAGTTCAT...GCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGCACCCGGCAGACGTTTaGAATCAAACTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRHPADV*NQTGSR
Trigger: TCTGCTGCCAGTTTGATTTCAAACGTCTGCCGGGTG...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGAGCCGCTGGTAGTTaGAGAACTGGGCATCCCATT +
Preference number: 4 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRRAAGS*RTGHPI
Trigger: AATGGGATGCCCAGTTCTTCAACTACCAGCGGCTCT...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp ACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTCTGTGGAGCATGTAGCGATTGCTaGTGGCGAAGTCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TWCGLSSLVLVLGGSLCGACSDC*WRSRWR
Trigger: GCGCCAGCGACTTCGCCATCAGCAATCGCTACATGC...TCCACAGAGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGCAGCCTTCGAACTGCTaGCCTCTTTTGGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRQPSNC*PLLGTD
Trigger: ATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCTG...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGCACGAGGAGGACGTTaGTTCGGAACAGCCGGGACT +
Preference number: 4 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSARGGR*FGTAGT
Trigger: AGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGC...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp ACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCACAAACCTGGGTGTCCCAAACTGGGCCTaGACATGGAACTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TTLSRSCSSGLNTTTNLGVPNWA*TWNSGL
Trigger: CAAGCCTGAGTTCCATGTGCAGGCCCAGTTTGGGAC...ACCCAGGTTTGTGGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp ACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCACAAACCTGGGTGTGATGGCATCGTGGTaGTGGAAGAGGCCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: TTLSRSCSSGLNTTTNLGVMASW*WKRPSV
Trigger: TACACTGGGCCTCTTCCAGCACCACGATGCCATCAC...ACCCAGGTTTGTGGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTCAGTGCACACTGATCTaGACAGACAGGGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAQCTLI*TDRGWP
Trigger: GGGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTG...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATACCACCTGTAGCACAGAGATTTaGCTCCTGGGGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TSRDTTLSRSCSSGLNTTCSTEI*LLGKFP
Trigger: TGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACA...GGTGGTATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCGACTTCTTCCGGTACTaGTCCAGGAGCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFDFFRY*SRSRAA
Trigger: GGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTC...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGCAGCCCCTCTACCCCTaGCAGGTTATAAAGTCGAAT +
Preference number: 4 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLQPLYP*QVIKSN
Trigger: ATTCGACTTTATAACCTGCCAGGGGTAGAGGGGCTG...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCGTCACATCCAGGCCATaGAAGAGGCTCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFVTSRP*KRLPRA
Trigger: AGCCCTGGGGAGCCTCTTCCATGGCCTGGATGTGAC...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp CGTTCTAACAGGAGGCGGAAACGGTTGCAGGTGATCTaGTTGTCTTTGAGCCCTTGGCCTAGTCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RSNRRRKRLQVI*LSLSPWPSPRL
Trigger: CAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
CDS-3UTR TCA 90 bp ACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGCAGTCTCTGTGGAGAACGCTCCTGCTCCTaGTGCACCTCTGGGCTCATT +
Preference number: 4 (lower is better)
Translates to: TWCGLSSLVLVLGGSLCGERSCS*CTSGLI
Trigger: AATGAGCCCAGAGGTGCATCAGGAGCAGGAGCGTTC...TCCACAGAGACTGCCTCCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTGAAGAAGGAGACTTCTaGCCAGAGAAAGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAEEGDF*PEKAPP
Trigger: CGGCGGCGCTTTCTCTGGGCAGAAGTCTCCTTCTTC...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp AATCTCTGTGAGTCAGGTGACAGACAGGAGGGCACATGGGAGCAGGAACAGCTAGTCGCAATCTCCAGCTaGCCATTTCCCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: NLCESGDRQEGTWEQEQLVAISS*PFPTSL
Trigger: AAGGCTGGTGGGAAATGGGCAGCTGGAGATTGCGAC...TAGCTGTTCCTGCTCCCATGTGCCCTCCTGTCTGTCACCTGACTCACAGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp GGCTGGTCTCAAATTTACAGAGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGACCCTCTGAATCAGCATaGTGGTCAGGTTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GWSQIYRDPPVSVSPVQGPSESA*WSGWHG
Trigger: GCCGTGCCAACCTGACCAGCATGCTGATTCAGAGGG...TCCCTGCACTGGAGAGACTGAGACAGGTGGATCTCTGTAAATTTGAGACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp AGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGATTAAAGGTATGTGCCAACAAGTCCAGGAGCAGGGCTaGCCTGTCTGCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: RSTCLSLSSAGIKGMCQQVQEQG*PVCHIG
Trigger: GCCAATGTGGCAGACAGGGCAGCCCTGCTCCTGGAC...TTGTTGGCACATACCTTTAATCCCTGCACTGGAGAGACTGAGACAGGTGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAATCCATCTGCTGCTCCTaGTCCTCATCCACCCGTCGG +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKSICCS*SSSTRR
Trigger: CCGACGGGTGGATGAGGAGCAGGAGCAGCAGATGGA...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTAAGTTCCCACCATTCTaGTGTCTGGCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCKFPPF*CLAGSC
Trigger: GCATGATCCTGCCAGACACCAGAATGGTGGGAACTT...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GAGTTGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAATAAGTTCCCACCATTCTaGTGTCTGGCAGGATCATGC +
Preference number: 4 (lower is better)
Translates to: ELTSRDTTLSRSCSSGLNKFPPF*CLAGSC
Trigger: GCATGATCCTGCCAGACACCAGAATGGTGGGAACTT...ATTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCATGGCATCGTGGTGCTaGAAGAGGCCCAGTGTACGC +
Preference number: 4 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGMASWC*KRPSVR
Trigger: GCGTACACTGGGCCTCTTCCAGCACCACGATGCCAT...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ACCATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTTGGGTGCTCGGCTGTCATCCATTTaGAGGAAGGGTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TMETLQELSLVTTESLGARLSSI*RKGVPG
Trigger: CCCTGGGACACCCTTCCTCCAAATGGATGACAGCCG...AGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCCGCCACTCTTGTCCTTaGAGGTACGGGTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFRHSCP*RYGCRR
Trigger: TCTACGGCACCCGTACCTCCAAGGACAAGAGTGGCG...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp CTGGGCAGTGTGCAGCGTGAGGCGCCTCTGGGAATCTaGGATATAGGCCATGACTGGCATAGGGTAGAAATT +
Preference number: 4 (lower is better)
Translates to: LGSVQREAPLGI*DIGHDWHRVEI
Trigger: AATTTCTACCCTATGCCAGTCATGGCCTATATCCAAGATTCCCAGAGGCGCCTCACGCTGCACACTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 72 bp TTGCCTTGGCTTGTGGTACAGTTGAAGCCCAGGTTCTaGGCTTCAAGGCCACAGTCAAACCCCTTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LPWLVVQLKPRF*ASRPQSNPLRC
Trigger: ACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCCAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
CDS-3UTR TCA 90 bp AATCTCTGTGAGTCAGGTGACAGACAGGAGGGCACATGGGAGCAGGAACAGCTATGGACACCATGCTGTTaGGGATGTGCTGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NLCESGDRQEGTWEQEQLWTPCC*GCAGSV
Trigger: AACAGACCCAGCACATCCTCAACAGCATGGTGTCCA...TAGCTGTTCCTGCTCCCATGTGCCCTCCTGTCTGTCACCTGACTCACAGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCCCCTCTTTTGGGCACTaGTGTTGTCCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGPSFGH*CCPTTW
Trigger: CCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGG...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp CTGGTAGACATCAGGGACCATGTCCGTAGCCGAGCTCCAGTGCACACTGATCTGCAGCAAAGTGCTTCTTaGTGGCATAATGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LVDIRDHVRSRAPVHTDLQQSAS*WHNAPS
Trigger: AGAGGGTGCATTATGCCATCAAGAAGCACTTTGCTG...CAGATCAGTGTGCACTGGAGCTCGGCTACGGACATGGTCCCTGATGTCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR TCA 90 bp AATCTCTGTGAGTCAGGTGACAGACAGGAGGGCACATGGGAGCAGGAACAGCTAAGAGCCGCTGGTAGTTaGAGAACTGGGCATCCCATT +
Preference number: 4 (lower is better)
Translates to: NLCESGDRQEGTWEQEQLRAAGS*RTGHPI
Trigger: AATGGGATGCCCAGTTCTTCAACTACCAGCGGCTCT...TAGCTGTTCCTGCTCCCATGTGCCCTCCTGTCTGTCACCTGACTCACAGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGTGATGGCATCGTGGTaGTGGAAGAGGCCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSVMASW*WKRPSV
Trigger: TACACTGGGCCTCTTCCAGCACCACGATGCCATCAC...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTCCCCGGTTGTCATCCTaGATTAGCCTTCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAPRLSS*ISLRSK
Trigger: CTTGGACCGAAGGCTAATGCAGGATGACAACCGGGG...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCGCAGCAGGTAAGGCATaGTGGAGCTGTGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFAAGKA*WSCVQR
Trigger: CCTTTGGACACAGCTCCACCATGCCTTACCTGCTGC...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGCGTTTGAAATCAAACTaGCAGCAGATCTTGGGATCG +
Preference number: 4 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLRLKSN*QQILGS
Trigger: CGATCCCAAGATCTGCTGCCAGTTTGATTTCAAACG...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTCTGTCAATGTCTGTGTaGATGCGCAGGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSLSMSV*MRRASS
Trigger: GGAACTGGCCCTGCGCATCCACACAGACATTGACAG...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTACGCAGATTGAGCAAATaGAAGTCACAGGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: LSLLRQSGGETWCGLSSLRRLSK*KSQGNG
Trigger: TCCATTGCCCTGTGACTTCCATTTGCTCAATCTGCG...TAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp ACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTaGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLQELSLVTTES*GAAGQTLVTFS
Trigger: AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp ATCTTGTTGTCTTTGAGCCCTTGGCCTAGTCCCCGGTaGTCATCCTGCATTAGCCTTCGGTCCAAGATCACC +
Preference number: 4 (lower is better)
Translates to: ILLSLSPWPSPR*SSCISLRSKIT
Trigger: GGTGATCTTGGACCGAAGGCTAATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
3UTR CAA 72 bp ATTGTGGTCCGACGTTCTAACAGGAGGCGGAAACGGTaGCAGGTGATCTTGTTGTCTTTGAGCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IVVRRSNRRRKR*QVILLSLSPWP
Trigger: AGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206807.2
CDS-3UTR TCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCACATCTGCCTCCACATaGACTCCAGGCTATGAGTGG +
Preference number: 4 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGTSAST*TPGYEW
Trigger: CCACTCATAGCCTGGAGTTCATGTGGAGGCAGATGT...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAAGTACACAGCCACCTCTaGGAAGAAAGGGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKVHSHL*EERAFG
Trigger: ACCGAAGGCCCTTTCTTCTCAGAGGTGGCTGTGTAC...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp AAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCCGCGTCCCAAACTGGGCCTaGACATGGAACTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KSPSRLRTLLRQLLPVARVPNWA*TWNSGL
Trigger: CAAGCCTGAGTTCCATGTGCAGGCCCAGTTTGGGAC...GCGGGCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCACAGGGAATGCTGACTaGCTGCTGACGGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGTGNAD*LLTDSF
Trigger: GAAACTGTCCGTCAGCAGGCAGTCAGCATTCCCTGT...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTCCAGAGAGATGTCAGTaGTGTTGGAAGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAPERCQ*CWKVRP
Trigger: TGGCCTCACCTTCCAACAGCACTGACATCTCTCTGG...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ACCATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTTGGGTGCTACTGCTGCCCTCTTTTaGGCACTGATGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TMETLQELSLVTTESLGATAALF*ALMLSH
Trigger: GTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGT...AGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCCGCTCTGAATCAGCATGCTaGTCAGGTTGGCACGGCGCA +
Preference number: 4 (lower is better)
Translates to: KSPSRLRTLLRQLLPVARSESAC*SGWHGA
Trigger: TGCGCCGTGCCAACCTGACCAGCATGCTGATTCAGA...GCGGGCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCTGTAATAGCCCGGGGTaGCACCTTCCAAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGCNSPG*HLPRAI
Trigger: AATTGCCCTTGGAAGGTGCCACCCCGGGCTATTACA...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCCGCATACCACCACAAACCTaGGTGAGGAGTCCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: KSPSRLRTLLRQLLPVARIPPQT*VRSPAG
Trigger: TCCGGCTGGACTCCTCACCCAGGTTTGTGGTGGTAT...GCGGGCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTATCCCTGATATCTACCTaGAATGACATGTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LSLLRQSGGETWCGLSSLSLIST*NDMSRD
Trigger: GTCTCTGGACATGTCATTCCAGGTAGATATCAGGGA...TAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp ACCATGGAGACCCTGCAAGAACTCAGCCTTGTCACTACTGAGTCTTTGGGTGCTTTGTCTTTGAGCCCTTaGCCTAGTCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TMETLQELSLVTTESLGALSLSP*PSPRLS
Trigger: TGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAA...AGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTATGAACTCCAGGCTATaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACTCATAGCCTGGAGTTCAT...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAAGGCTTGTGGTACAGTTaGAGCCCAGGTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKGLWYS*SPGSWL
Trigger: AAGCCAAGAACCTGGGCTTCAACTGTACCACAAGCC...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAATGTCTGGCAGGATCATaGTGCACTCGGTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKCLAGS*CTRSSI
Trigger: TATGCTGGACCGAGTGCAGCATGATCCTGCCAGACA...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAACAGGGCTGCCCTGTCTaGCACATTGGCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKQGCPV*HIGFCN
Trigger: ATTACAGAAGCCAATGTGGCAGACAGGGCAGCCCTG...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCCGCCACCATTCTGGTGTCTaGCAGGATCATGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KSPSRLRTLLRQLLPVARHHSGV*QDHAAL
Trigger: GAGTGCAGCATGATCCTGCCAGACACCAGAATGGTG...GCGGGCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCTGTAGCACAGAGATTTaGCTCCTGGGGAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFCSTEI*LLGKFP
Trigger: TGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACA...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AGTCTTGGCTTACTAAGTTTTCGTAAGGATGGAACTTTGCTTTTACCAACTCTTGTAGGGCAGCAGGGCTaGCGGGCCCTCCGCATTGGC +
Preference number: 4 (lower is better)
Translates to: SLGLLSFRKDGTLLLPTLVGQQG*RALRIG
Trigger: GCCAATGCGGAGGGCCCGCCAGCCCTGCTGCCCTAC...AAGAGTTGGTAAAAGCAAAGTTCCATCCTTACGAAAACTTAGTAAGCCAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCTGTTGTCCCACCACTTaGCGAAGAAGGAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGCCPTT*RRRRLL
Trigger: CAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACA...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTCAAAGTCAAGGAGGTTaGCTGCAGGAAGGTCACATC +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAQSQGG*LQEGHI
Trigger: GATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTG...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp AGGCAGGTGGGGAATCTCTGTGATTTCCAGGCCAGCTaGGTTTACATAATGAGTTCCAGCACAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RQVGNLCDFQAS*VYIMSSSTARG
Trigger: ACCTCTGGCTGTGCTGGAACTCATTATGTAAACCAAGCTGGCCTGGAAATCACAGAGATTCCCCACCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCCAGCAAAGTGCTTCTTaGTGGCATAATGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFQQSAS*WHNAPS
Trigger: AGAGGGTGCATTATGCCATCAAGAAGCACTTTGCTG...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp AAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCCGCTCTGAATCCCACATCTaGCTCCACATGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSPSRLRTLLRQLLPVARSESHI*LHMNSR
Trigger: CCTGGAGTTCATGTGGAGGCAGATGTGGGATTCAGA...GCGGGCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR GCA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCAATGTCTGTGTGGATaGGCAGGGCCAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: AEESKSFENSVKTATACCQCLCG*AGPVPC
Trigger: ACAAGGAACTGGCCCTGCGCATCCACACAGACATTG...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AATTGTAATTCTTGTTTCCATCTGAAGTGTGGGTTAGTGACACCAACACACTGTAGACGGAGAAGAAGCTaGGCCGGGGCTCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NCNSCFHLKCGLVTPTHCRRRRS*AGAPGA
Trigger: TGCTCCCGGAGCCCCGGCCCAGCTTCTTCTCCGTCT...ACAGTGTGTTGGTGTCACTAACCCACACTTCAGATGGAAACAAGAATTACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp CAACATAAACCATGGAGACCCTGCAAGAACTCAGCCTaGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: QHKPWRPCKNSA*SLLSLWVLLDR
Trigger: TCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAGGCTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTACTTGTCAAAAGTCTTaGTCCAGCCTGGATCGTTGT +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRATCQKS*SSLDRC
Trigger: ACAACGATCCAGGCTGGATCAAGACTTTTGACAAGT...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTCGGCTTATGATGTCATaGTTTTCCTCCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRARLMMS*FSSSSC
Trigger: ACAACTGCTGGAGGAAAACCATGACATCATAAGCCG...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
3UTR CAA 72 bp GTCCAACCTCGTGGGAATTACACTGATGTTTATGGGTaGATTTGGGGAGAACCAGTCGTTACAGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: VQPRGNYTDVYG*IWGEPVVTGQL
Trigger: GAGTTGCCCTGTAACGACTGGTTCTCCCCAAATCAACCCATAAACATCAGTGTAATTCCCACGAGGTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp AATTGTAATTCTTGTTTCCATCTGAAGTGTGGGTTAGTGACACCAACACACTGTTGGATGTCAGGTGGCTaGGGAGGGACGGGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: NCNSCFHLKCGLVTPTHCWMSGG*GGTGSL
Trigger: CAAGCTACCCGTCCCTCCTCAGCCACCTGACATCCA...ACAGTGTGTTGGTGTCACTAACCCACACTTCAGATGGAAACAAGAATTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp TGGCTGACCTGGAATTCACCATGTAGACCAGGCTGGTCTCAAATTTACAGAGATTGTTGTCCCACCACTTaGCGAAGAAGGAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: WLTWNSPCRPGWSQIYRDCCPTT*RRRRLL
Trigger: CAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACA...ATCTCTGTAAATTTGAGACCAGCCTGGTCTACATGGTGAATTCCAGGTCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR GCA 90 bp AGTCTTGGCTTACTAAGTTTTCGTAAGGATGGAACTTTGCTTTTACCAACTCTTCTCTCCAGCCACTGGTaGCCCTCGATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLGLLSFRKDGTLLLPTLLSSHW*PSMSWS
Trigger: TGACCAGCTCATCGAGGGGCACCAGTGGCTGGAGAG...AAGAGTTGGTAAAAGCAAAGTTCCATCCTTACGAAAACTTAGTAAGCCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AATTGTAATTCTTGTTTCCATCTGAAGTGTGGGTTAGTGACACCAACACACTGTTTTCTCTCCAGCCACTaGTGCCCCTCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NCNSCFHLKCGLVTPTHCFLSSH*CPSMSW
Trigger: CCAGCTCATCGAGGGGCACCAGTGGCTGGAGAGAAA...ACAGTGTGTTGGTGTCACTAACCCACACTTCAGATGGAAACAAGAATTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AGTCTTGGCTTACTAAGTTTTCGTAAGGATGGAACTTTGCTTTTACCAACTCTTCCAGAACGGCGGGCATaGGCCAAAGCCAGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SLGLLSFRKDGTLLLPTLPERRA*AKARLY
Trigger: ATACAGCCTGGCTTTGGCCCATGCCCGCCGTTCTGG...AAGAGTTGGTAAAAGCAAAGTTCCATCCTTACGAAAACTTAGTAAGCCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CCA 90 bp AGTCTTGGCTTACTAAGTTTTCGTAAGGATGGAACTTTGCTTTTACCAACTCTTTGCACAGACAGGGGCTaGCCCTCCTCTGAAAGGACG +
Preference number: 4 (lower is better)
Translates to: SLGLLSFRKDGTLLLPTLCTDRG*PSSERT
Trigger: CGTCCTTTCAGAGGAGGGCCAGCCCCTGTCTGTGCA...AAGAGTTGGTAAAAGCAAAGTTCCATCCTTACGAAAACTTAGTAAGCCAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR TCA 90 bp TGGCTGACCTGGAATTCACCATGTAGACCAGGCTGGTCTCAAATTTACAGAGATACTTGTCAAAAGTCTTaGTCCAGCCTGGATCGTTGT +
Preference number: 4 (lower is better)
Translates to: WLTWNSPCRPGWSQIYRDTCQKS*SSLDRC
Trigger: ACAACGATCCAGGCTGGATCAAGACTTTTGACAAGT...ATCTCTGTAAATTTGAGACCAGCCTGGTCTACATGGTGAATTCCAGGTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CCA 90 bp TGGAATTCACCATGTAGACCAGGCTGGTCTCAAATTTACAGAGATCCACCTGTCCGGCTTATGATGTCATaGTTTTCCTCCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: WNSPCRPGWSQIYRDPPVRLMMS*FSSSSC
Trigger: ACAACTGCTGGAGGAAAACCATGACATCATAAGCCG...GACAGGTGGATCTCTGTAAATTTGAGACCAGCCTGGTCTACATGGTGAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp TGGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAGTTGACCAGCAGGGACACCGGCGGGCCCTCCGCATaGGCTGTCAGTTCCAGTACA +
Preference number: 5 (lower is better)
Translates to: WPSSERTRTRGELTSRDTGGPSA*AVSSST
Trigger: TGTACTGGAACTGACAGCCAATGCGGAGGGCCCGCC...GGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp AGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCGGCACGAGGAGGACGTaGCTTCGGAACAGCCGGGAC +
Preference number: 5 (lower is better)
Translates to: RSPAGSPCARAGHHGLHGGTRRT*LRNSRD
Trigger: GTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCC...GCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS CCA 90 bp GAATCAGCATGCTGGTCAGGTTGGCACGGCGCAGCAGGTAAGGCATaGTGGAGCTGTGTCCAAAGGGGTCCACTGCCCAGCCCGAGCGCG +
Preference number: 5 (lower is better)
Translates to: ESACWSGWHGAAGKA*WSCVQRGPLPSPSA
Trigger: CGCGCTCGGGCTGGGCAGTGGACCCCTTTGGACACAGCTCCACCATGCCTTACCTGCTGCGCCGTGCCAACCTGACCAGCATGCTGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CCACAAACCTGGGTGAGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATAACTGGCAGCAGATCTaGGGATCGGGGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: PQTWVRSPAGSPCARAGHNWQQI*GSGPQV
Trigger: CACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGTT...ATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCTCACCCAGGTTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp GACGCGCACCCGGGGCGAGTTGACCAGCAGGGACACCACACTGAGCCGCTCCTGCCACCCGGCAGACGTTaGAAATCAAACTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DAHPGRVDQQGHHTEPLLPPGRR*KSNWQQ
Trigger: CTGCTGCCAGTTTGATTTCAAACGTCTGCCGGGTGG...CAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS CCA 90 bp GTACGCCGAGCTTCCGTCAGAAGAGCAAAATCAGACAGCGGGTACTaGCCGGCCAGTCCAGAACGGCGGGCATGGGCCAAAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VRRASVRRAKSDSGY*PASPERRAWAKARL
Trigger: CAGCCTGGCTTTGGCCCATGCCCGCCGTTCTGGACTGGCCGGCCAGTACCCGCTGTCTGATTTTGCTCTTCTGACGGAAGCTCGGCGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CCACAAACCTGGGTGAGGAGTCCAGCCGGATCACCGTGCGCTCGGGCAGGGCATGCCCTGTCTGCCACATaGGCTTCTGTAATAGCCCGG +
Preference number: 5 (lower is better)
Translates to: PQTWVRSPAGSPCARAGHALSAT*ASVIAR
Trigger: CCGGGCTATTACAGAAGCCAATGTGGCAGACAGGGC...ATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCTCACCCAGGTTTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS CCA 90 bp AAATCAGACAGCGGGTACTGGCCGGCCAGTCCAGAACGGCGGGCATaGGCCAAAGCCAGGCTGTATAGAATCTCTGCCCCACGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: KSDSGYWPASPERRA*AKARLYRISAPRRW
Trigger: CCACCTGCGTGGGGCAGAGATTCTATACAGCCTGGCTTTGGCCCATGCCCGCCGTTCTGGACTGGCCGGCCAGTACCCGCTGTCTGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp ATCTGCACAGACAGGGGCTGGCCCTCCTCTGAAAGGACGCGCACCCGGGGCGAGAACTGCTGCCCTCTTTaGGGCACTGATGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: ICTDRGWPSSERTRTRGENCCPL*GTDVVP
Trigger: TGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTT...CTCGCCCCGGGTGCGCGTCCTTTCAGAGGAGGGCCAGCCCCTGTCTGTGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS GCA 90 bp GCTGACCAGGGAACGCAGCAACCTGACCCCGTAGTCTACCACTACTaGCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ADQGTQQPDPVVYHY*LLGGSRDGIVVLEE
Trigger: CTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGTAGACTACGGGGTCAGGTTGCTGCGTTCCCTGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098346.5
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS CCA 90 bp CCGGTCAGCGTAGGAGAAGAAGTCCCCACTCAGCACAGGAAACCCTaGAGGCCGGGCACCAGGCTCTACTCCTGTCCTCTTATACAGGGC +
Preference number: 5 (lower is better)
Translates to: PVSVGEEVPTQHRKP*RPGTRLYSCPLIQG
Trigger: GCCCTGTATAAGAGGACAGGAGTAGAGCCTGGTGCCCGGCCTCCAGGGTTTCCTGTGCTGAGTGGGGACTTCTTCTCCTACGCTGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 90 bp TTGGGCACTGATGTTGTCCCACCACTTGGCGAAGAAGGAGACTTCTaGCCAGAGAAAGCGCCGCCGGGGGTCTTCCTGCAGCTTGGACAC +
Preference number: 5 (lower is better)
Translates to: LGTDVVPPLGEEGDF*PEKAPPGVFLQLGH
Trigger: GTGTCCAAGCTGCAGGAAGACCCCCGGCGGCGCTTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 90 bp TCTACCACTACTGCCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTaGTGGAAGAGGCCCAGTGTACGCCGAGCTTCCGTCAGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: STTTASLAVPVMASW*WKRPSVRRASVRRA
Trigger: TGCTCTTCTGACGGAAGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CCA 90 bp ACGAGGAGGACGTTGCTTCGGAACAGCCGGGACTTCTTCCGGTACTaGTCCAGGAGCAGGGCTGCCCTGTCTGCCACATTGGCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: TRRTLLRNSRDFFRY*SRSRAALSATLASV
Trigger: TACAGAAGCCAATGTGGCAGACAGGGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGGCGGGCCCTCCGCATaGGCTGTCAGTTCCAGTACA +
Preference number: 5 (lower is better)
Translates to: LSLLRQSGGETWCGLSSLGGPSA*AVSSST
Trigger: TGTACTGGAACTGACAGCCAATGCGGAGGGCCCGCC...TAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGTTGGACACCATGCTGTaGAGGATGTGCTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: AKSLAPESTTRTGNADCLLDTML*RMCWVC
Trigger: ACAGACCCAGCACATCCTCAACAGCATGGTGTCCAA...CAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp GCGAAGTCGCTGGCGCCGGAGTCCACAACACGGACAGGGAATGCTGACTGCCTGTTTTGGGCACTGATGTaGTCCCACCACTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: AKSLAPESTTRTGNADCLFWALM*SHHLAK
Trigger: CTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAA...CAGGCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS GCA 90 bp AAGAAGGAGACTTCTGCCCAGAGAAAGCGCCGCCGGGGGTCTTCCTaGAGCTTGGACACCATGCTGTTGAGGATGTGCTGGGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: KKETSAQRKRRRGSS*SLDTMLLRMCWVCS
Trigger: GGAACAGACCCAGCACATCCTCAACAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCGGCGCTTTCTCTGGGCAGAAGTCTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 90 bp CAGGGCTGCCCTGTCTGCCACATTGGCTTCTGTAATAGCCCGGGGTaGCACCTTCCAAGGGCAATTGATTCTCCCACCCGGCAGACGTTT +
Preference number: 5 (lower is better)
Translates to: QGCPVCHIGFCNSPG*HLPRAIDSPTRQTF
Trigger: AAACGTCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGGTGCCACCCCGGGCTATTACAGAAGCCAATGTGGCAGACAGGGCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 90 bp GGCATCCCATTCCTGGGGCTTGTCATACCGGAAGTCATCACCAAGTaGCACGAGGAGGACGTTGCTTCGGAACAGCCGGGACTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: GIPFLGLVIPEVITK*HEEDVASEQPGLLP
Trigger: CGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCCACTTGGTGATGACTTCCGGTATGACAAGCCCCAGGAATGGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 90 bp ACCACTACTGCCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTGCTaGAAGAGGCCCAGTGTACGCCGAGCTTCCGTCAGAAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: TTTASLAVPVMASWC*KRPSVRRASVRRAK
Trigger: TTTTGCTCTTCTGACGGAAGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGAAGACTGCAGCGTGTAGGGCCCATCGAGATCTGGCTGCAGCTGCAGCACACCTTGATGATAACCTGCTaGAGGCTGACCAGGGAACGC +
Preference number: 5 (lower is better)
Translates to: GRLQRVGPIEIWLQLQHTLMITC*RLTRER
Trigger: GCGTTCCCTGGTCAGCCTCAAGCAGGTTATCATCAA...GGTGTGCTGCAGCTGCAGCCAGATCTCGATGGGCCCTACACGCTGCAGTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS GCA 90 bp GCTTGTCATACCGGAAGTCATCACCAAGTGGCACGAGGAGGACGTTaGTTCGGAACAGCCGGGACTTCTTCCGGTACTGGTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: ACHTGSHHQVARGGR*FGTAGTSSGTGPGA
Trigger: TGCTCCTGGACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCCACTTGGTGATGACTTCCGGTATGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGCCACCCGGCAGACGTTaGAAATCAAACTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLPPGRR*KSNWQQ
Trigger: CTGCTGCCAGTTTGATTTCAAACGTCTGCCGGGTGG...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CGGATCACCGTGCGCTCGGGCAGGGCATCATGGCTTACACGGCTGTCATCCATTTCCCATTCCTGGGGCTaGTCATACCGGAAGTCATCA +
Preference number: 5 (lower is better)
Translates to: RITVRSGRASWLTRLSSISHSWG*SYRKSS
Trigger: TGATGACTTCCGGTATGACAAGCCCCAGGAATGGGA...AATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCCGAGCGCACGGTGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAACGCACCCGGGGCGAGTaGACCAGCAGGGACACCACA +
Preference number: 5 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKRTRGE*TSRDTT
Trigger: TGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCG...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGCCACAGTCAAACCCCTaGCGGTGTAAGATGAGCGCA +
Preference number: 5 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLPQSNP*RCKMSA
Trigger: TGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGG...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS TCA 90 bp GCCCATTTCCCACCAGCCTTCGAACTGCTGCCCTCTTTTGGGCACTaGTGTTGTCCCACCACTTGGCGAAGAAGGAGACTTCTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: AHFPPAFELLPSFGH*CCPTTWRRRRLLPR
Trigger: TCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCTGGTGGGAAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CCTGCTGACGGACAGTTTCACGCCGTTCAGGTAGACCCGCACGGAAGACTGCAGGTTTTCCTCCAGCAGTaGTTCCAGCTGTTCTATCCG +
Preference number: 5 (lower is better)
Translates to: PADGQFHAVQVDPHGRLQVFLQQ*FQLFYP
Trigger: CGGATAGAACAGCTGGAACAACTGCTGGAGGAAAAC...CTGCAGTCTTCCGTGCGGGTCTACCTGAACGGCGTGAAACTGTCCGTCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAAGGCACGAGGAGGACGTaGCTTCGGAACAGCCGGGAC +
Preference number: 5 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKGTRRT*LRNSRD
Trigger: GTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCC...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp AAGGCCGGAGAACCAGACCTGCATGTAGCGATTGCTGATGGCGAAGTCGCTGGCTTGATGATAACCTGCTaGAGGCTGACCAGGGAACGC +
Preference number: 5 (lower is better)
Translates to: KAGEPDLHVAIADGEVAGLMITC*RLTRER
Trigger: GCGTTCCCTGGTCAGCCTCAAGCAGGTTATCATCAA...GCCAGCGACTTCGCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGCGCCTCTGGGAATCTaGGATATAGGCCATGACTGG +
Preference number: 5 (lower is better)
Translates to: LSLLRQSGGETWCGLSSLAPLGI*DIGHDW
Trigger: CCAGTCATGGCCTATATCCAAGATTCCCAGAGGCGC...TAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGTGGCCTAGTCCCCGGTaGTCATCCTGCATTAGCCTT +
Preference number: 5 (lower is better)
Translates to: AVWPEPGNINHGDPARTQWPSPR*SSCISL
Trigger: AAGGCTAATGCAGGATGACAACCGGGGACTAGGCCA...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS GCA 90 bp CTCCTGGGGAAGTTCCCACCATTCTGGTGTCTGGCAGGATCATGCTaGACTCGGTCCAGCATAAGGTACAGAGAAAAGACGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: LLGKFPPFWCLAGSC*TRSSIRYREKTATQ
Trigger: CTGTGTGGCCGTCTTTTCTCTGTACCTTATGCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 90 bp TGGCTCCTGGGGAAGTTCCCACCATTCTGGTGTCTGGCAGGATCATaGTGCACTCGGTCCAGCATAAGGTACAGAGAAAAGACGGCCACA +
Preference number: 5 (lower is better)
Translates to: WLLGKFPPFWCLAGS*CTRSSIRYREKTAT
Trigger: TGTGGCCGTCTTTTCTCTGTACCTTATGCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 90 bp CAAGGGCAATTGATTCTCCCACCCGGCAGACGTTTGAAATCAAACTaGCAGCAGATCTTGGGATCGGGGCCACAGGTGTGTGGAACGTCG +
Preference number: 5 (lower is better)
Translates to: QGQLILPPGRRLKSN*QQILGSGPQVCGTS
Trigger: CGACGTTCCACACACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGTTTGATTTCAAACGTCTGCCGGGTGGGAGAATCAATTGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGATGTTGTCCCACCACTaGGCGAAGAAGGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLMLSHH*AKKETS
Trigger: AGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACAT...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTTTTTGGGCACTGATGTaGTCCCACCACTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCFWALM*SHHLAK
Trigger: CTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAA...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAACTGCTGCCCTCTTTaGGGCACTGATGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRNCCPL*GTDVVP
Trigger: TGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTT...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTAACTGGCAGCAGATCTaGGGATCGGGGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRANWQQI*GSGPQV
Trigger: CACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGTT...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCAGAGCGGAGGGGAGACTTGGTGTGGCTTGTCCAGCTTAGTCTTGGTGTTAGGAGGAGGCGGAAACGGTaGCAGGTGATCTTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: AERRGDLVWLVQLSLGVRRRRKR*QVILLS
Trigger: AGACAACAAGATCACCTGCAACCGTTTCCGCCTCCT...CCTAACACCAAGACTAAGCTGGACAAGCCACACCAAGTCTCCCCTCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTCAGTGTCCCAGTCATTaGGGCTGTAGGAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCQCPSH*GCRRCQ
Trigger: TTGACATCTCCTACAGCCCAAATGACTGGGACACTG...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp ACCTCCCCTGGCCTGGCCCTTTACCTTGAGAAGCCCAGTAAGGCCGGAGAACCATACTTGTCAAAAGTCTaGATCCAGCCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: TSPGLALYLEKPSKAGEPYLSKV*IQPGSL
Trigger: CAACGATCCAGGCTGGATCAAGACTTTTGACAAGTA...TGGTTCTCCGGCCTTACTGGGCTTCTCAAGGTAAAGGGCCAGGCCAGGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTGCCCTGTCTGCCACATaGGCTTCTGTAATAGCCCGG +
Preference number: 5 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRAALSAT*ASVIAR
Trigger: CCGGGCTATTACAGAAGCCAATGTGGCAGACAGGGC...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CGAGTTGACCAGCAGGGACACCACACTGAGCCGCTCCTGTTCCAGCGGGTTAAAACATGGAACTCAGGCTaGCTGTTGAGGAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: RVDQQGHHTEPLLFQRVKTWNSG*LLRKSK
Trigger: CTTTGACTTCCTCAACAGCAAGCCTGAGTTCCATGT...TTTAACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTACGGCTGTCATCCATTaGGAGGAAGGGTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSTAVIH*EEGCPR
Trigger: CCTGGGACACCCTTCCTCCAAATGGATGACAGCCGT...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAACTCCCCAGGGCTAGCTaGCCTTGGCTTGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKLPRAS*PWLVVQ
Trigger: CTGTACCACAAGCCAAGGCAAGCTAGCCCTGGGGAG...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCGAGATGTCAGTGCTGTaGGAAGGTGAGGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFEMSVL*EGEARG
Trigger: CCCTCTGGCCTCACCTTCCAACAGCACTGACATCTC...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CCA 90 bp TTCTGTAGCACAGAGATTTGGCTCCTGGGGAAGTTCCCACCATTCTaGTGTCTGGCAGGATCATGCTGCACTCGGTCCAGCATAAGGTAC +
Preference number: 5 (lower is better)
Translates to: FCSTEIWLLGKFPPF*CLAGSCCTRSSIRY
Trigger: GTACCTTATGCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 90 bp GTTCCAGCTGTTCTATCCGGTTCTGTAGCACAGAGATTTGGCTCCTaGGGAAGTTCCCACCATTCTGGTGTCTGGCAGGATCATGCTGCA +
Preference number: 5 (lower is better)
Translates to: VPAVLSGSVAQRFGS*GSSHHSGVWQDHAA
Trigger: TGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACAGAACCGGATAGAACAGCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp TGCTTTGGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTACCTTCCAAGGGCAATaGATTCTCCCACCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: CFGRLRLLVTRSLSRLRATFQGQ*ILPPGR
Trigger: TCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGGT...AGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGCTGGTCTCAAATTTACAGAGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGAACCTTCCAAGGGCAATaGATTCTCCCACCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: GWSQIYRDPPVSVSPVQGTFQGQ*ILPPGR
Trigger: TCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGGT...TCCCTGCACTGGAGAGACTGAGACAGGTGGATCTCTGTAAATTTGAGACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CTACCCCTCTCCTCCCAGAATCACCCTGCTCCTGTACCCTCATACCAGCACTGTACATGGAACTCAGGCTaGCTGTTGAGGAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LPLSSQNHPAPVPSYQHCTWNSG*LLRKSK
Trigger: CTTTGACTTCCTCAACAGCAAGCCTGAGTTCCATGT...ACAGTGCTGGTATGAGGGTACAGGAGCAGGGTGATTCTGGGAGGAGAGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CCA 90 bp AGCAGTTGTTCCAGCTGTTCTATCCGGTTCTGTAGCACAGAGATTTaGCTCCTGGGGAAGTTCCCACCATTCTGGTGTCTGGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: SSCSSCSIRFCSTEI*LLGKFPPFWCLAGS
Trigger: TGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACAGAACCGGATAGAACAGCTGGAACAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp CTTGTCACTACTGAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTACGCCACCCTCCACATaGTCAAACGGCAAATCCTCA +
Preference number: 5 (lower is better)
Translates to: LVTTESLGAAGQTLVTFSTPPST*SNGKSS
Trigger: TGAGGATTTGCCGTTTGACAATGTGGAGGGTGGCGT...AGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTCAGTAGTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCCGTGTGGCCTGAGCCTGGCAACATAAACCATGGAGACCCTGCAAGAACTCAGTACTTGTCAAAAGTCTaGATCCAGCCTGGATCGTTG +
Preference number: 5 (lower is better)
Translates to: AVWPEPGNINHGDPARTQYLSKV*IQPGSL
Trigger: CAACGATCCAGGCTGGATCAAGACTTTTGACAAGTA...CTGAGTTCTTGCAGGGTCTCCATGGTTTATGTTGCCAGGCTCAGGCCACACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCCGGTTGCAGGTGATCTaGTTGTCTTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFRLQVI*LSLSPW
Trigger: CCAAGGGCTCAAAGACAACAAGATCACCTGCAACCG...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CCCCACTCTTCATCTCATTCCTGTCACCAAGACATGAATAGGAAGCCGTGTGGCTGGCTTGTGGTACAGTaGAAGCCCAGGTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PHSSSHSCHQDMNRKPCGWLVVQ*KPRFLA
Trigger: AGCCAAGAACCTGGGCTTCAACTGTACCACAAGCCA...GCCACACGGCTTCCTATTCATGTCTTGGTGACAGGAATGAGATGAAGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCGCAAAGTCAAGGAGGTaGGCTGCAGGAAGGTCACAT +
Preference number: 5 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFAKSRR*AAGRSH
Trigger: ATGTGACCTTCCTGCAGCCAACCTCCTTGACTTTGC...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GAGTCTTTGGGTGCTGCTGGACAGACCCTAGTGACGTTCTCTGAGAAGTCAAAATTGGACACCATGCTGTaGAGGATGTGCTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: ESLGAAGQTLVTFSEKSKLDTML*RMCWVC
Trigger: ACAGACCCAGCACATCCTCAACAGCATGGTGTCCAA...TTTTGACTTCTCAGAGAACGTCACTAGGGTCTGTCCAGCAGCACCCAAAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGCTGGTCTCAAATTTACAGAGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGAATGTTGTCCCACCACTaGGCGAAGAAGGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: GWSQIYRDPPVSVSPVQGMLSHH*AKKETS
Trigger: AGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACAT...TCCCTGCACTGGAGAGACTGAGACAGGTGGATCTCTGTAAATTTGAGACCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp AAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCCCGCTCCCATTCCTGGGGCTaGTCATACCGGAAGTCATCA +
Preference number: 5 (lower is better)
Translates to: KSPSRLRTLLRQLLPVARSHSWG*SYRKSS
Trigger: TGATGACTTCCGGTATGACAAGCCCCAGGAATGGGA...GCGGGCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GGGCGCCTTCGCTTACTGGTGACGAGATCTTTATCCAGATTACGGGCTTCTTTCTTGCAGGTGATCTTGTaGTCTTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GRLRLLVTRSLSRLRASFLQVIL*SLSPWP
Trigger: AGGCCAAGGGCTCAAAGACAACAAGATCACCTGCAA...GAAAGAAGCCCGTAATCTGGATAAAGATCTCGTCACCAGTAAGCGAAGGCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCTTGATGATAACCTGCTaGAGGCTGACCAGGGAACGC +
Preference number: 5 (lower is better)
Translates to: AEESKSFENSVKTATACCLMITC*RLTRER
Trigger: GCGTTCCCTGGTCAGCCTCAAGCAGGTTATCATCAA...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp CAGCACAGTCTGTCACTTCTGAGGCAGAGCGGAGGGGAGACTTGGTGTGGCTTGATAAAGTCGAATCACTaGGTGAAAGTGCTCATAGTA +
Preference number: 5 (lower is better)
Translates to: QHSLSLLRQSGGETWCGLIKSNH*VKVLIV
Trigger: TACTATGAGCACTTTCACCAAGTGATTCGACTTTAT...CAAGCCACACCAAGTCTCCCCTCCGCTCTGCCTCAGAAGTGACAGACTGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCTTGAAGCCCAGGTTCTaGGCTTCAAGGCCACAGTCA +
Preference number: 5 (lower is better)
Translates to: AEESKSFENSVKTATACCLKPRF*ASRPQS
Trigger: TGACTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAA...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp GCAGAAGAGTCCAAGTCGTTTGAGAACTCTGTTAAGACAGCTACTGCCTGTTGCGTTTTCCTCCAGCAGTaGTTCCAGCTGTTCTATCCG +
Preference number: 5 (lower is better)
Translates to: AEESKSFENSVKTATACCVFLQQ*FQLFYP
Trigger: CGGATAGAACAGCTGGAACAACTGCTGGAGGAAAAC...GCAACAGGCAGTAGCTGTCTTAACAGAGTTCTCAAACGACTTGGACTCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS-3UTR CAA 90 bp AGATCCACCTGTCTCAGTCTCTCCAGTGCAGGGATTAAAGGTATGTGCCAACAACAGTGTCCCAGTCATTaGGGCTGTAGGAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: RSTCLSLSSAGIKGMCQQQCPSH*GCRRCQ
Trigger: TTGACATCTCCTACAGCCCAAATGACTGGGACACTG...TTGTTGGCACATACCTTTAATCCCTGCACTGGAGAGACTGAGACAGGTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206301.2
CDS CCA 90 bp GCTGTCAGTTCCAGTACAGAGTCCTTGATACGGCTTATGATGTCATaGTTTTCCTCCAGCAGTTGTTCCAGCTGTTCTATCCGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: AVSSSTESLIRLMMS*FSSSSCSSCSIRFC
Trigger: ACAGAACCGGATAGAACAGCTGGAACAACTGCTGGAGGAAAACCATGACATCATAAGCCGTATCAAGGACTCTGTACTGGAACTGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS-3UTR CAA 90 bp AGTCTTGGCTTACTAAGTTTTCGTAAGGATGGAACTTTGCTTTTACCAACTCTTGTGATCTTGTTGTCTTaGAGCCCTTGGCCTAGTCCC +
Preference number: 5 (lower is better)
Translates to: SLGLLSFRKDGTLLLPTLVILLS*SPWPSP
Trigger: GGGACTAGGCCAAGGGCTCAAAGACAACAAGATCAC...AAGAGTTGGTAAAAGCAAAGTTCCATCCTTACGAAAACTTAGTAAGCCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CCA 72 bp GCCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTGCTaGAAGAGGCCCAGTGTACGCCGAGCGCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: ASLAVPVMASWC*KRPSVRRAQVG
Trigger: GCCCACCTGCGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS GCA 72 bp ACTGCCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTaGTGGAAGAGGCCCAGTGTACGCCGAGCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: TASLAVPVMASW*WKRPSVRRAQV
Trigger: CACCTGCGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS GCA 72 bp GTAAGGCATGGTGGAGCTGTGTCCAAAGGGGTCCACTaGCCAGCCCGAGCGCGGGGTTGCACCCAGGTTTCT +
Preference number: 6 (lower is better)
Translates to: VRHGGAVSKGVH*PARARGCTQVS
Trigger: AGAAACCTGGGTGCAACCCCGCGCTCGGGCTGGGCAGTGGACCCCTTTGGACACAGCTCCACCATGCCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp ACTGCCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTaGTGGAAGAGGCCCAGTGTACGCCGAGCTTCCGTC +
Preference number: 6 (lower is better)
Translates to: TASLAVPVMASW*WKRPSVRRASV
Trigger: GACGGAAGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CCA 72 bp GCCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTGCTaGAAGAGGCCCAGTGTACGCCGAGCTTCCGTCAGA +
Preference number: 6 (lower is better)
Translates to: ASLAVPVMASWC*KRPSVRRASVR
Trigger: TCTGACGGAAGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CCA 72 bp ACTACTGCCTCCTTGGCGGTTCCCGTGATGGCATCGTaGTGCTGGAAGAGGCCCAGTGTACGCCGAGCGCAG +
Preference number: 6 (lower is better)
Translates to: TTASLAVPVMAS*CWKRPSVRRAQ
Trigger: CTGCGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS CCA 72 bp GAGCGCGGGGTTGCACCCAGGTTTCTCTCCAGCCACTaGTGCCCCTCGATGAGCTGGTCAACCAAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: ERGVAPRFLSSH*CPSMSWSTKAK
Trigger: CTTTGCCTTGGTTGACCAGCTCATCGAGGGGCACCAGTGGCTGGAGAGAAACCTGGGTGCAACCCCGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp ACTACTGCCTCCTTGGCGGTTCCCGTGATGGCATCGTaGTGCTGGAAGAGGCCCAGTGTACGCCGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: TTASLAVPVMAS*CWKRPSVRRAS
Trigger: GGAAGCTCGGCGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CAA 72 bp GCCCAGAGAAAGCGCCGCCGGGGGTCTTCCTGCAGCTaGGACACCATGCTGTTGAGGATGTGCTGGGTCTGT +
Preference number: 6 (lower is better)
Translates to: AQRKRRRGSSCS*DTMLLRMCWVC
Trigger: ACAGACCCAGCACATCCTCAACAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCGGCGCTTTCTCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp ACTTCTGCCCAGAGAAAGCGCCGCCGGGGGTCTTCCTaGAGCTTGGACACCATGCTGTTGAGGATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: TSAQRKRRRGSS*SLDTMLLRMCW
Trigger: CCAGCACATCCTCAACAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCGGCGCTTTCTCTGGGCAGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp GATGTTGTCCCACCACTTGGCGAAGAAGGAGACTTCTaGCCAGAGAAAGCGCCGCCGGGGGTCTTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: DVVPPLGEEGDF*PEKAPPGVFLQ
Trigger: CTGCAGGAAGACCCCCGGCGGCGCTTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp CCGGGACTTCTTCCGGTACTGGTCCAGGAGCAGGGCTaGCCTGTCTGCCACATTGGCTTCTGTAATAGCCCG +
Preference number: 6 (lower is better)
Translates to: PGLLPVLVQEQG*PVCHIGFCNSP
Trigger: CGGGCTATTACAGAAGCCAATGTGGCAGACAGGGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp GGAACGCAGCAACCTGACCCCGTAGTCTACCACTACTaGCTCCTTGGCGGTTCCCGTGATGGCATCGTGGTG +
Preference number: 6 (lower is better)
Translates to: GTQQPDPVVYHY*LLGGSRDGIVV
Trigger: CACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGTAGACTACGGGGTCAGGTTGCTGCGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098346.5
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS CCA 72 bp ACGTTGCTTCGGAACAGCCGGGACTTCTTCCGGTACTaGTCCAGGAGCAGGGCTGCCCTGTCTGCCACATTG +
Preference number: 6 (lower is better)
Translates to: TLLRNSRDFFRY*SRSRAALSATL
Trigger: CAATGTGGCAGACAGGGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp GCTTCCGTCAGAAGAGCAAAATCAGACAGCGGGTACTaGCCGGCCAGTCCAGAACGGCGGGCATGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: ASVRRAKSDSGY*PASPERRAWAK
Trigger: TTTGGCCCATGCCCGCCGTTCTGGACTGGCCGGCCAGTACCCGCTGTCTGATTTTGCTCTTCTGACGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CAA 90 bp CTTCGAACTGCTGCCCTCTTTTGGGCACTGATGTTGTCCCACCACTaGGCGAAGAAGGAGACTTCTGCCCAGAGAAAGCGCCGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: LRTAALFWALMLSHH*AKKETSAQRKRRRG
Trigger: CCCCCGGCGGCGCTTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS TCA 72 bp CGTAGTCTACCACTACTGCCTCCTTGGCGGTTCCCGTaGTGGCATCGTGGTGCTGGAAGAGGCCCAGTGTAC +
Preference number: 6 (lower is better)
Translates to: RSLPLLPPWRFP*WHRGAGRGPVY
Trigger: GTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGTAGACTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098346.5
ENSMUST00000205853.2
ENSMUST00000206301.2
CDS CCA 72 bp GTAGGAGAAGAAGTCCCCACTCAGCACAGGAAACCCTaGAGGCCGGGCACCAGGCTCTACTCCTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: VGEEVPTQHRKP*RPGTRLYSCPL
Trigger: AAGAGGACAGGAGTAGAGCCTGGTGCCCGGCCTCCAGGGTTTCCTGTGCTGAGTGGGGACTTCTTCTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 90 bp GGCTTGTCATACCGGAAGTCATCACCAAGTGGCACGAGGAGGACGTaGCTTCGGAACAGCCGGGACTTCTTCCGGTACTGGTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GLSYRKSSPSGTRRT*LRNSRDFFRYWSRS
Trigger: GCTCCTGGACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCCACTTGGTGATGACTTCCGGTATGACAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp ACCGGAAGTCATCACCAAGTGGCACGAGGAGGACGTTaGTTCGGAACAGCCGGGACTTCTTCCGGTACTGGT +
Preference number: 6 (lower is better)
Translates to: TGSHHQVARGGR*FGTAGTSSGTG
Trigger: ACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCCACTTGGTGATGACTTCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp AGAGGTAGGCGCCACTCTTGTCCTTGGAGGTACGGGTaGCGTAGACGAGGAACTCCAGTTCCATCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RGRRHSCPWRYG*RRRGTPVPSAA
Trigger: AGCAGCAGATGGAACTGGAGTTCCTCGTCTACGGCACCCGTACCTCCAAGGACAAGAGTGGCGCCTACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
CDS CCA 72 bp CCTGTCTGCCACATTGGCTTCTGTAATAGCCCGGGGTaGCACCTTCCAAGGGCAATTGATTCTCCCACCCGG +
Preference number: 6 (lower is better)
Translates to: PVCHIGFCNSPG*HLPRAIDSPTR
Trigger: CCGGGTGGGAGAATCAATTGCCCTTGGAAGGTGCCACCCCGGGCTATTACAGAAGCCAATGTGGCAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp AACGCTCCTGCTCCTGATGCACCTCTGGGCTCATTGTaGTCCGACGTTCTAACAGGAGGCGGAAACGGTTGC +
Preference number: 6 (lower is better)
Translates to: NAPAPDAPLGSL*SDVLTGGGNGC
Trigger: GCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGGTGCATCAGGAGCAGGAGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS CAA 72 bp TACCGGAAGTCATCACCAAGTGGCACGAGGAGGACGTaGCTTCGGAACAGCCGGGACTTCTTCCGGTACTGG +
Preference number: 6 (lower is better)
Translates to: YRKSSPSGTRRT*LRNSRDFFRYW
Trigger: CCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTCGTGCCACTTGGTGATGACTTCCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp ACAGAGATTTGGCTCCTGGGGAAGTTCCCACCATTCTaGTGTCTGGCAGGATCATGCTGCACTCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TEIWLLGKFPPF*CLAGSCCTRSS
Trigger: GCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp CATAATGCACCCTCTGAATCAGCATGCTGGTCAGGTTaGCACGGCGCAGCAGGTAAGGCATGGTGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: HNAPSESACWSG*HGAAGKAWWSC
Trigger: ACAGCTCCACCATGCCTTACCTGCTGCGCCGTGCCAACCTGACCAGCATGCTGATTCAGAGGGTGCATTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 72 bp GCTGCCCTCTTTTGGGCACTGATGTTGTCCCACCACTaGGCGAAGAAGGAGACTTCTGCCCAGAGAAAGCGC +
Preference number: 6 (lower is better)
Translates to: AALFWALMLSHH*AKKETSAQRKR
Trigger: GCGCTTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 72 bp GGGCAGGGCATCATGGCTTACACGGCTGTCATCCATTaGGAGGAAGGGTGTCCCAGGGTCAAAGCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: GQGIMAYTAVIH*EEGCPRVKAVG
Trigger: ACCTACAGCTTTGACCCTGGGACACCCTTCCTCCAAATGGATGACAGCCGTGTAAGCCATGATGCCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098346.5
CDS TCA 72 bp CCACCAGCCTTCGAACTGCTGCCCTCTTTTGGGCACTaGTGTTGTCCCACCACTTGGCGAAGAAGGAGACTT +
Preference number: 6 (lower is better)
Translates to: PPAFELLPSFGH*CCPTTWRRRRL
Trigger: AAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp CCATTTCCCACCAGCCTTCGAACTGCTGCCCTCTTTTaGGCACTGATGTTGTCCCACCACTTGGCGAAGAAG +
Preference number: 6 (lower is better)
Translates to: PFPTSLRTAALF*ALMLSHHLAKK
Trigger: CTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCTGGTGGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 72 bp GTCCCAGTCATTTGGGCTGTAGGAGATGTCAAAGCCTaGCCTCCACACGCCACCCTCCACATTGTCAAACGG +
Preference number: 6 (lower is better)
Translates to: VPVIWAVGDVKA*PPHATLHIVKR
Trigger: CCGTTTGACAATGTGGAGGGTGGCGTGTGGAGGCAAGGCTTTGACATCTCCTACAGCCCAAATGACTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 72 bp AGCCTTCGAACTGCTGCCCTCTTTTGGGCACTGATGTaGTCCCACCACTTGGCGAAGAAGGAGACTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SLRTAALFWALM*SHHLAKKETSA
Trigger: GGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 90 bp TTTCCCACCAGCCTTCGAACTGCTGCCCTCTTTTGGGCACTGATGTaGTCCCACCACTTGGCGAAGAAGGAGACTTCTGCCCAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: FPTSLRTAALFWALM*SHHLAKKETSAQRK
Trigger: CTTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAGTTCGAAGGCTGGTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS TCA 72 bp CACTTGGTGAAAGTGCTCATAGTACACAGCCACCTCTaGGAAGAAAGGGCCTTCGGTGACACGCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: HLVKVLIVHSHL*EERAFGDTQHR
Trigger: CCTGTGCTGCGTGTCACCGAAGGCCCTTTCTTCTCAGAGGTGGCTGTGTACTATGAGCACTTTCACCAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206807.2
CDS CCA 72 bp TTGATTCTCCCACCCGGCAGACGTTTGAAATCAAACTaGCAGCAGATCTTGGGATCGGGGCCACAGGTGTGT +
Preference number: 6 (lower is better)
Translates to: LILPPGRRLKSN*QQILGSGPQVC
Trigger: ACACACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGTTTGATTTCAAACGTCTGCCGGGTGGGAGAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS TCA 72 bp GCTGGGTCTGTTCCGTGTAGTACTTGTCAAAAGTCTTaGTCCAGCCTGGATCGTTGTGGGAGTGAGGCACCA +
Preference number: 6 (lower is better)
Translates to: AGSVPCSTCQKS*SSLDRCGSEAP
Trigger: TGGTGCCTCACTCCCACAACGATCCAGGCTGGATCAAGACTTTTGACAAGTACTACACGGAACAGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS TCA 72 bp CTGTGCTGGAGTCTGAATCCCACATCTGCCTCCACATaGACTCCAGGCTATGAGTGGCAGCAAAGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LCWSLNPTSAST*TPGYEWQQSAS
Trigger: AGAAGCACTTTGCTGCCACTCATAGCCTGGAGTTCATGTGGAGGCAGATGTGGGATTCAGACTCCAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp GCATCGAAATACTCAGAGAGGGTCCCAAACTGGGCCTaGACATGGAACTCAGGCTTGCTGTTGAGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: ASKYSERVPNWA*TWNSGLLLRKS
Trigger: TGACTTCCTCAACAGCAAGCCTGAGTTCCATGTGCAGGCCCAGTTTGGGACCCTCTCTGAGTATTTCGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp GTTCTATCCGGTTCTGTAGCACAGAGATTTGGCTCCTaGGGAAGTTCCCACCATTCTGGTGTCTGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: VLSGSVAQRFGS*GSSHHSGVWQD
Trigger: ATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACAGAACCGGATAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CCA 72 bp TCCAGCTGTTCTATCCGGTTCTGTAGCACAGAGATTTaGCTCCTGGGGAAGTTCCCACCATTCTGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: SSCSIRFCSTEI*LLGKFPPFWCL
Trigger: CAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAATCTCTGTGCTACAGAACCGGATAGAACAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS GCA 72 bp AAGTTCCCACCATTCTGGTGTCTGGCAGGATCATGCTaGACTCGGTCCAGCATAAGGTACAGAGAAAAGACG +
Preference number: 6 (lower is better)
Translates to: KFPPFWCLAGSC*TRSSIRYREKT
Trigger: CGTCTTTTCTCTGTACCTTATGCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2
CDS CAA 72 bp ATGTCAAAGCCTTGCCTCCACACGCCACCCTCCACATaGTCAAACGGCAAATCCTCAGACACGGTTAACATC +
Preference number: 6 (lower is better)
Translates to: MSKPCLHTPPST*SNGKSSDTVNI
Trigger: GATGTTAACCGTGTCTGAGGATTTGCCGTTTGACAATGTGGAGGGTGGCGTGTGGAGGCAAGGCTTTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098346.5
ENSMUST00000206301.2