Pregenerated sensors for MAN1B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036646Ensembl transcript IDs: ENSMUST00000042390.5, ENSMUST00000136245.8
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTGGAGGGACCTACAACTGGGCAGGTACATCACACTTGACAGCTaGCCAAAACTATGTGGGCCTTGTGAAGGTCAGGGACCCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: NWRDLQLGRYITLDS*PKLCGPCEGQGPNR Trigger: CCTGTTGGGTCCCTGACCTTCACAAGGCCCACATAGTTTTGGGCAGCTGTCAAGTGTGATGTACCTGCCCAGTTGTAGGTCCCTCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CCA 90 bp | GTAAACACTAGAGCCACAAAGACCCTCAAGGTCACACTGGCCCAGTaGACCCATGGGTCAATCAGGAGTCAGGGCTATCACAGGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: VNTRATKTLKVTLAQ*THGSIRSQGYHRPL Trigger: CAATGGCCTGTGATAGCCCTGACTCCTGATTGACCCATGGGTCCACTGGGCCAGTGTGACCTTGAGGGTCTTTGTGGCTCTAGTGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 90 bp | CCTGCTAGTCTGACTCCTGCCCCTCCCACCACCTTCATGAAAAGTTaGAACTGGAGGGACCTACAACTGGGCAGGTACATCACACTTGAC | + |
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Preference number: 1 (lower is better) Translates to: PASLTPAPPTTFMKS*NWRDLQLGRYITLD Trigger: GTCAAGTGTGATGTACCTGCCCAGTTGTAGGTCCCTCCAGTTTCAACTTTTCATGAAGGTGGTGGGAGGGGCAGGAGTCAGACTAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 90 bp | CCCCAGCGTAGCTACTATACCTCAGAGGCACAAGGTGGCTGCCACTaGGCTGCAGATGAGTTAGTTAGCATGTCAAATCTCCAGATCTTG | + |
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Preference number: 1 (lower is better) Translates to: PQRSYYTSEAQGGCH*AADELVSMSNLQIL Trigger: CAAGATCTGGAGATTTGACATGCTAACTAACTCATCTGCAGCTCAGTGGCAGCCACCTTGTGCCTCTGAGGTATAGTAGCTACGCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 90 bp | GCTTTAATGAGGCTCCCAGCTTTGTGGACATCTACCCAGTTTCTCTaGTCCACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCA | + |
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Preference number: 1 (lower is better) Translates to: ALMRLPALWTSTQFL*STVPLQRATGQLLS Trigger: TGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGTGGATCAGAGAAACTGGGTAGATGTCCACAAAGCTGGGAGCCTCATTAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTTGACACCAGCGCCGGCAGCAGCATGTaGTCTTCACAGGCCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: TVPLQRATGQLLSSLDTSAGSSM*SSQALV Trigger: CACAAGGGCCTGTGAAGATCACATGCTGCTGCCGGC...GCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTGAATACACTTCTCAATaGTTAGGCCCTGGGCGCCGC | + |
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Preference number: 2 (lower is better) Translates to: CLYWAPASPSRPIPILYAEYTSQ*LGPGRR Trigger: GCGGCGCCCAGGGCCTAAGCATTGAGAAGTGTATTC...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTTGACACCAGCCACTGGGGTCCTGGGTaGTCCCAGGAGGTGATAAGA | + |
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Preference number: 2 (lower is better) Translates to: TVPLQRATGQLLSSLDTSHWGPG*SQEVIR Trigger: TCTTATCACCTCCTGGGACCACCCAGGACCCCAGTG...GCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | GAACACAGGCCCAGAGCCTTGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATGCCATACCTGCTAGTCTaGCTCCTGCCCCTCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: EHRPRALRSFLFCPVCPMPYLLV*LLPLPP Trigger: TGGTGGGAGGGGCAGGAGTCAGACTAGCAGGTATGG...CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCAGCCAGGAGGATCCCTaGGTCCAACCCGTAAACACT | + |
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Preference number: 2 (lower is better) Translates to: THQRQGLLHGLRHQGTTTSQEDP*VQPVNT Trigger: AGTGTTTACGGGTTGGACTCAGGGATCCTCCTGGCT...GGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGATGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCACAAGGTGGCTGCCACTaGGCTGCAGATGAGTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: PASPSRPIPILYALMRLPQGGCH*AADELV Trigger: AACTAACTCATCTGCAGCTCAGTGGCAGCCACCTTG...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CAA 90 bp | TTCACAGGCCCTTGTGAGACGGCACAACCAAGCATCCTAGCCTGTTaGTATAATGGCCCCAAAGCCTTCCTACCTGAAGTGGACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FTGPCETAQPSILAC*YNGPKAFLPEVDRS Trigger: GCTCCTGTCCACTTCAGGTAGGAAGGCTTTGGGGCCATTATACAAACAGGCTAGGATGCTTGGTTGTGCCGTCTCACAAGGGCCTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CAA 90 bp | CCACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTaGACACCAGCCATAGTTTGGCAGGAGATGGAGAATACACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PQYLFRGPQGSYCHP*TPAIVWQEMENTLL Trigger: GAGAAGTGTATTCTCCATCTCCTGCCAAACTATGGCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | GAACACAGGCCCAGAGCCTTGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATGCTCCCACCACCTTCATaGAAAGTTGAAACTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: EHRPRALRSFLFCPVCPMLPPPS*KVETGG Trigger: CCCTCCAGTTTCAACTTTTCATGAAGGTGGTGGGAG...CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CCA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTCTCAGAGGCACAAGGTaGCTGCCACTGAGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSLRGTR*LPLSCR Trigger: TCTGCAGCTCAGTGGCAGCCACCTTGTGCCTCTGAG...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | GAACACAGGCCCAGAGCCTTGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATGCAGGTACATCACACTTaGCAGCTGCCCAAAACTATG | + |
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Preference number: 2 (lower is better) Translates to: EHRPRALRSFLFCPVCPMQVHHT*QLPKTM Trigger: CATAGTTTTGGGCAGCTGTCAAGTGTGATGTACCTG...CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTCAATACAGGCACTGGGGTCCTGGGTGGTCCCAGGAGGTGATAAGAAGACCTTCATGAAAAGTTaGAACTGGAGGGACCTACAA | + |
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Preference number: 2 (lower is better) Translates to: LNSIQALGSWVVPGGDKKTFMKS*NWRDLQ Trigger: TTGTAGGTCCCTCCAGTTTCAACTTTTCATGAAGGT...CTTCTTATCACCTCCTGGGACCACCCAGGACCCCAGTGCCTGTATTGAGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAAATTTACTGTTCTAACCCCCGCCAGCCCAGTAGGGTAGCCAGGAGGATCAGGGTCATTCAGGTATaGGAATCAGGAGCCATGATA | + |
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Preference number: 2 (lower is better) Translates to: RQIYCSNPRQPSRVARRIRVIQV*ESGAMI Trigger: TATCATGGCTCCTGATTCCCATACCTGAATGACCCT...GATCCTCCTGGCTACCCTACTGGGCTGGCGGGGGTTAGAACAGTAAATTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAAAGCACCTCACTGGTTTaGGCTATCACTCTGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQSTSLV*AITLNS Trigger: TGAGTTCAGAGTGATAGCCCAAACCAGTGAGGTGCT...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCACTATGCTGTACTGCATaGAATTGGATAGGAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: PASPSRPIPILYALMRLPLCCTA*NWIGES Trigger: GGATTCTCCTATCCAATTCCATGCAGTACAGCATAG...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CAA 90 bp | CCAGCCAAGTCCTTCTTTGTAAACACCTTTGGTGTTAGAACTGGCTaGGGGTCCACGTGTTTAACAGGAAGTCCCCAGCGTAGCTACTAT | + |
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Preference number: 2 (lower is better) Translates to: PAKSFFVNTFGVRTG*GSTCLTGSPQRSYY Trigger: ATAGTAGCTACGCTGGGGACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTACAAAGAAGGACTTGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CCA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTGGAGGGACCTACAACTaGGCAGGTACATCACACTTG | + |
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Preference number: 2 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSGGTYN*AGTSHL Trigger: CAAGTGTGATGTACCTGCCCAGTTGTAGGTCCCTCC...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAACACTTTCTTCTCAGCTaGGAGATCACATTATACCAG | + |
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Preference number: 2 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQHFLLS*EITLYQ Trigger: CTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTG...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTTTAGAGGGTAGTTGCTaGGATGTTATCCAGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSLEGSC*DVIQRT Trigger: GGTTCTCTGGATAACATCTCAGCAACTACCCTCTAA...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CCA 72 bp | ACAGGCCATTGGGCCATGCCCAGCACCTCACTGGTTTaGGCTATCACTCTGAACTCAATACAGGCACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: TGHWAMPSTSLV*AITLNSIQALG Trigger: CCCCAGTGCCTGTATTGAGTTCAGAGTGATAGCCCAAACCAGTGAGGTGCTGGGCATGGCCCAATGGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CCA 72 bp | ATGGGTCAATCAGGAGTCAGGGCTATCACAGGCCATTaGGCCATGCCCAGCACCTCACTGGTTTGGGCTATC | + |
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Preference number: 3 (lower is better) Translates to: MGQSGVRAITGH*AMPSTSLVWAI Trigger: GATAGCCCAAACCAGTGAGGTGCTGGGCATGGCCCAATGGCCTGTGATAGCCCTGACTCCTGATTGACCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 72 bp | CAGCCGGCAGCAGCATGTGATCTTCACAGGCCCTTGTaGGACGGCACAACCAAGCATCCTAGCCTGTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: QPAAACDLHRPL*DGTTKHPSLFV Trigger: TACAAACAGGCTAGGATGCTTGGTTGTGCCGTCTCACAAGGGCCTGTGAAGATCACATGCTGCTGCCGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 72 bp | AGGCTCCCAGCTTTGTGGACATCTACCCAGTTTCTCTaGTCCACAGTACCTCTTCAGAGGGCCACAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RLPALWTSTQFL*STVPLQRATGQ Trigger: CTGCCCTGTGGCCCTCTGAAGAGGTACTGTGGATCAGAGAAACTGGGTAGATGTCCACAAAGCTGGGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTTGACACCAGCAGCATCCTAGCCTGTTaGTATAATGGCCCCAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: TVPLQRATGQLLSSLDTSSILAC*YNGPKA Trigger: GGCTTTGGGGCCATTATACAAACAGGCTAGGATGCT...GCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 72 bp | ACAACTACCACAAACCTATCAGCCGGCAGCAGCATGTaGTCTTCACAGGCCCTTGTGAGACGGCACAACCAA | + |
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Preference number: 3 (lower is better) Translates to: TTTTNLSAGSSM*SSQALVRRHNQ Trigger: TTGGTTGTGCCGTCTCACAAGGGCCTGTGAAGATCACATGCTGCTGCCGGCTGATAGGTTTGTGGTAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR GCA 72 bp | GACCTACAACTGGGCAGGTACATCACACTTGACAGCTaGCCAAAACTATGTGGGCCTTGTGAAGGTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: DLQLGRYITLDS*PKLCGPCEGQG Trigger: TCCCTGACCTTCACAAGGCCCACATAGTTTTGGGCAGCTGTCAAGTGTGATGTACCTGCCCAGTTGTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR GCA 72 bp | CATAGTTTGGCAGGAGATGGAGAATACACTTCTCAATaGTTAGGCCCTGGGCGCCGCCTGAACCTGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: HSLAGDGEYTSQ*LGPGRRLNLSI Trigger: AATGGACAGGTTCAGGCGGCGCCCAGGGCCTAAGCATTGAGAAGTGTATTCTCCATCTCCTGCCAAACTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR GCA 72 bp | ACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATaGTTTAATGAGGCTCCCAGCTTTGTGGACATCTAC | + |
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Preference number: 3 (lower is better) Translates to: TSLPFQAHSHLV*FNEAPSFVDIY Trigger: GTAGATGTCCACAAAGCTGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CAA 90 bp | CCACTTTCTTCTCAGCTGAGAGATCACATTATACCAGGGTATCCTGGGAATAAGCAGCACCTCACTGGTTaGGGCTATCACTCTGAACTC | + |
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Preference number: 3 (lower is better) Translates to: PLSSQLRDHIIPGYPGNKQHLTG*GYHSEL Trigger: GAGTTCAGAGTGATAGCCCAAACCAGTGAGGTGCTG...CTTATTCCCAGGATACCCTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR GCA 72 bp | TCCTTTCTATTCTGTCCAGTTTGCCCTATGCTGTACTaGATGGAATTGGATAGGAGAATCCTAGCCAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: SFLFCPVCPMLY*MELDRRILAKA Trigger: GGCCTTGGCTAGGATTCTCCTATCCAATTCCATGCAGTACAGCATAGGGCAAACTGGACAGAATAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTCACCTTCATGAAAAGTaGAAACTGGAGGGACCTACA | + |
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Preference number: 3 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSHLHEK*KLEGPT Trigger: TGTAGGTCCCTCCAGTTTCAACTTTTCATGAAGGTG...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR TCA 72 bp | AGGGTCATTCAGGTATGGGAATCAGGAGCCATGATATaGGGTTTCGAGGAAGTCAAAGGCTTGGTAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: RVIQVWESGAMI*GFEEVKGLVDF Trigger: AAAGTCTACCAAGCCTTTGACTTCCTCGAAACCTCATATCATGGCTCCTGATTCCCATACCTGAATGACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | GTCCATTCACAAGCCTATGGGGCTCCGGTAGAGGAGGACAGCATAGGGAGAAGCGAGATGAAGTCCCGGTaGGGCGCCGGCGGCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VHSQAYGAPVEEDSIGRSEMKSR*GAGGGA Trigger: GGCGCCGCCGCCGGCGCCTCACCGGGACTTCATCTC...GCTTCTCCCTATGCTGTCCTCCTCTACCGGAGCCCCATAGGCTTGTGAATGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGGCCGCCGCCGGCTCTTaGTGTTGTCGTAGCTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVAAAGS*CCRSSR Trigger: GCGAGAGCTACGACAACAGCAAGAGCCGGCGGCGGC...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | GTCCATTCACAAGCCTATGGGGCTCCGGTAGAGGAGGACAGCATAGGGAGAAGCCCATTTCCTCCAGCATaGGCGCCGCCGCCGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VHSQAYGAPVEEDSIGRSPFPPA*APPPAL Trigger: AAGAGCCGGCGGCGGCGCTCATGCTGGAGGAAATGG...GCTTCTCCCTATGCTGTCCTCCTCTACCGGAGCCCCATAGGCTTGTGAATGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTGTGAGCTTTCTGGGCTaGGACTGCCGGAGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: CLYWAPASPSRPIPILYAVSFLG*DCRSRW Trigger: CCATCTGCTCCGGCAGTCTCAGCCCAGAAAGCTCAC...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | TGCCCAAAACTATGTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGCTGGCAGGCCATGGTaGACACCCAAAGCCAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: CPKLCGPCEGQGPNRPTSAGRPW*TPKASV Trigger: GACGCTGGCTTTGGGTGTCCACCATGGCCTGCCAGC...TGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCACATAGTTTTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCAGGCCGCAGCAGGTTGTaGCTGTCAGCTGGCTTGACC | + |
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Preference number: 4 (lower is better) Translates to: PASPSRPIPILYALMRLPGRSRL*LSAGLT Trigger: GGTCAAGCCAGCTGACAGGCACAACCTGCTGCGGCC...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAATCAGCGTCACCGAGATaGAGTCCCGGTGAGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQSASPR*SPGEAP Trigger: CGGCGCCTCACCGGGACTTCATCTCGGTGACGCTGA...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCAGGTCCATCTTGGCACTaGAGCGGCCGTGGGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: PASPSRPIPILYALMRLPGPSWH*SGRGQV Trigger: AACTTGCCCACGGCCGCTTCAGTGCCAAGATGGACC...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGCCCGAGGGTACATGTTaGAATGTGCAATCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVPEGTC*NVQSQG Trigger: GCCCTGAGATTGCACATTTCAACATGTACCCTCGGG...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | ACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTTGACACCAGCGTGTTTTCTTCCTGCTaGGCCTTCCCCAGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TVPLQRATGQLLSSLDTSVFSSC*AFPRAA Trigger: AGCAGCCCTGGGGAAGGCTCAGCAGGAAGAAAACAC...GCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | CTGAACTCAATACAGGCACTGGGGTCCTGGGTGGTCCCAGGAGGTGATAAGAAGCACAGCTGTCCAGACTaGGCAGCTCCAGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSIQALGSWVVPGGDKKHSCPD*AAPGHQ Trigger: CTGATGACCTGGAGCTGCTCAGTCTGGACAGCTGTG...CTTCTTATCACCTCCTGGGACCACCCAGGACCCCAGTGCCTGTATTGAGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTGATGGGCTTCTGTGTTaGACACACAGCTGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLYWAPASPSRPIPILYADGLLC*THSCPD Trigger: GTCTGGACAGCTGTGTGTTCAACACAGAAGCCCATC...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | TGCCCAAAACTATGTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAAGCCTTCCCCAGGGCTaGTTCTCTCTCCTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPKLCGPCEGQGPNRPTSSLPQG*FSLLSI Trigger: GATGCTAAGGAGAGAGAAGCAGCCCTGGGGAAGGCT...TGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCACATAGTTTTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGTTCCCAGACAGGGAGTaGATGTGCTTTGTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVFPDRE*MCFVTS Trigger: GGAAGTGACAAAGCACATCCACTCCCTGTCTGGGAA...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAATACAGGCACTGGGGTCCTGGGTGGTCCCAGGAGGTGATAAGAAGGTGAACACTCCTGGGTaGGTGAAGAGGCCGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSIQALGSWVVPGGDKKVNTPG*VKRPLF Trigger: GAACAGCGGCCTCTTCACCCACCCAGGAGTGTTCAC...CTTCTTATCACCTCCTGGGACCACCCAGGACCCCAGTGCCTGTATTGAGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | GAACACAGGCCCAGAGCCTTGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATGACGCAGGAGCCCAGATaGGGAGGGGATGGGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EHRPRALRSFLFCPVCPMTQEPR*GGDGLL Trigger: CAGAAGCCCATCCCCTCCCCATCTGGGCTCCTGCGT...CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | GAACACAGGCCCAGAGCCTTGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATGAGGCATCGATCAGGGTaGGGCCCAGGCCAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: EHRPRALRSFLFCPVCPMRHRSG*GPGQTT Trigger: AGTGGTTTGGCCTGGGCCTCACCCTGATCGATGCCT...CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGTACTTATTGAAGCTCTaGAGGATTTCCCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVYLLKL*RISQPQ Trigger: CTGGGGCTGGGAAATCCTGCAGAGCTTCAATAAGTA...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | AGACAAATTTACTGTTCTAACCCCCGCCAGCCCAGTAGGGTAGCCAGGAGGATCGGTCTAATCTGCAGATaGGGAGGGCCCCGCCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQIYCSNPRQPSRVARRIGLICR*GGPRRK Trigger: TTTTCGGCGGGGCCCTCCCCATCTGCAGATTAGACC...GATCCTCCTGGCTACCCTACTGGGCTGGCGGGGGTTAGAACAGTAAATTTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | ACTCATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCCAAGGTGAACACTCCTaGGTGGGTGAAGAGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: THQRQGLLHGLRHQGTTTQGEHS*VGEEAA Trigger: AGCGGCCTCTTCACCCACCCAGGAGTGTTCACCTTG...GGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGATGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAAGCTTTCCACCGTCTCTaGCCGCAGCAGGTTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQAFHRL*PQQVVP Trigger: AGGCACAACCTGCTGCGGCCAGAGACGGTGGAAAGC...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CAA 72 bp | TGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTaGTATGCTTTAATGAGGCTCCCAGCTTTGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WAPASPSRPIPI*YALMRLPALWT Trigger: TGTCCACAAAGCTGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | GTCCATTCACAAGCCTATGGGGCTCCGGTAGAGGAGGACAGCATAGGGAGAAGCCACTGGTCAGCCGTATaGAGAGAGTACAGGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHSQAYGAPVEEDSIGRSHWSAV*REYRNP Trigger: TGGATTCCTGTACTCTCTTCATACGGCTGACCAGTG...GCTTCTCCCTATGCTGTCCTCCTCTACCGGAGCCCCATAGGCTTGTGAATGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGGTACATGTTGAAATGTaGAATCTCAGGGCTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVVHVEM*NLRAQT Trigger: GGTCTGAGCCCTGAGATTGCACATTTCAACATGTAC...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTCAAAATCTTCAGCTTTaGTCAGGAAGAGGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLYWAPASPSRPIPILYAQNLQL*SGRGCP Trigger: GGGACAGCCTCTTCCTGACCAAAGCTGAAGATTTTG...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGTCCTCCACGGCCTCCTaGAATTTCTTTATTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVSSTAS*NFFIPV Trigger: TACTGGAATAAAGAAATTCCAGGAGGCCGTGGAGGA...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAATACAGGCACTGGGGTCCTGGGTGGTCCCAGGAGGTGATAAGAAGCAGATGGGGAGGGGATaGGCTTCTGTGTTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LNSIQALGSWVVPGGDKKQMGRG*ASVLNT Trigger: TGTGTTCAACACAGAAGCCCATCCCCTCCCCATCTG...CTTCTTATCACCTCCTGGGACCACCCAGGACCCCAGTGCCTGTATTGAGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGGCTCTTTCCATATCTTaGATGCCAAAACCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVALSIS*MPKPEV Trigger: AACCTCTGGTTTTGGCATCCAAGATATGGAAAGAGC...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTTTGTGGACATCTACCCAGTTTCTCTGATCCACAGTACCTCTTCAGAGCACTGAAGCGGCCGTaGGCAAGTTCTCCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLCGHLPSFSDPQYLFRALKRP*ASSPTK Trigger: CTTCGTGGGAGAACTTGCCCACGGCCGCTTCAGTGC...TCTGAAGAGGTACTGTGGATCAGAGAAACTGGGTAGATGTCCACAAAGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAATACAGGCACTGGGGTCCTGGGTGGTCCCAGGAGGTGATAAGAAGGTTGTGCCTGTCAGCTaGCTTGACCTCCACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNSIQALGSWVVPGGDKKVVPVS*LDLHIF Trigger: AAAGATGTGGAGGTCAAGCCAGCTGACAGGCACAAC...CTTCTTATCACCTCCTGGGACCACCCAGGACCCCAGTGCCTGTATTGAGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCATGTAGCCTCGAAAGCTaGTTCCATTTCCTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PASPSRPIPILYALMRLPCSLES*FHFLQH Trigger: ATGCTGGAGGAAATGGAAGCAGCTTTCGAGGCTACA...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTACAGGCAGGACTTCTTaGTTCATCTTCTCTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLYWAPASPSRPIPILYATGRTS*FIFSTS Trigger: AGAAGTAGAGAAGATGAAGCAAGAAGTCCTGCCTGT...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCATCCTTAGCATCATCCTaGATCCCATCCTTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PASPSRPIPILYALMRLPSLASS*IPSLET Trigger: AGTCTCCAAGGATGGGATGCAGGATGATGCTAAGGA...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAAGACAGGGAGTGGATGTaGTTTGTCACTTCCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQDREWM*FVTSST Trigger: CGTGGAGGAAGTGACAAAGCACATCCACTCCCTGTC...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTTCCCAGCCCCAGTCCTaGTACTTGCGGTCCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSSQPQS*YLRSLV Trigger: CACAAGGGACCGCAAGTACCAGGACTGGGGCTGGGA...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTGGCTTGTGGGAATTCTaGACGTTGTTGATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLYWAPASPSRPIPILYAGLWEF*TLLIEE Trigger: TTCTTCTATCAACAACGTCCAGAATTCCCACAAGCC...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAATCTCCATCTTGTCCCTaGGCTCAGGCTTGTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQSPSCP*AQACGN Trigger: ATTCCCACAAGCCTGAGCCCAGGGACAAGATGGAGA...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | ACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTTGACACCAGCTGTAAGGAAGTTCAGTaGCCTGTTCAGGCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TVPLQRATGQLLSSLDTSCKEVQ*PVQAQS Trigger: TGATTGAGCCTGAACAGGCCACTGAACTTCCTTACA...GCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CCA 90 bp | AGACAAATTTACTGTTCTAACCCCCGCCAGCCCAGTAGGGTAGCCAGGAGGATCAGGAAGCACACTAAGTaGTCCATCTTGGCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQIYCSNPRQPSRVARRIRKHTK*SILALK Trigger: CTTCAGTGCCAAGATGGACCACTTAGTGTGCTTCCT...GATCCTCCTGGCTACCCTACTGGGCTGGCGGGGGTTAGAACAGTAAATTTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CAA 72 bp | CCTTGTGAGACGGCACAACCAAGCATCCTAGCCTGTTaGTATAATGGCCCCAAAGCCTTCCTACCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCETAQPSILAC*YNGPKAFLPEV Trigger: CACTTCAGGTAGGAAGGCTTTGGGGCCATTATACAAACAGGCTAGGATGCTTGGTTGTGCCGTCTCACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTGTTCTCCCACGAAGGTaGGCTTTCTGGGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSVLPRR*AFWAET Trigger: AGTCTCAGCCCAGAAAGCTCACCTTCGTGGGAGAAC...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | TGCCCAAAACTATGTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGCTTGCTTAAATTCTTaGTTCAGACCCAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPKLCGPCEGQGPNRPTSACLNS*FRPKIH Trigger: GTGGATTTTGGGTCTGAAGCAAGAATTTAAGCAAGC...TGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCACATAGTTTTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| 3UTR CAA 72 bp | GATCTTGGGATATACAGGGAACACAGGCCCAGAGCCTaGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: DLGIYREHRPRA*RSFLFCPVCPM Trigger: CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTCCCTGTATATCCCAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | AAAGTTGAAACTGGAGGGACCTACAACTGGGCAGGTACATCACACTTGACAGCTGGCCAAACCACTCACTaGAGGTTTTGGACACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVETGGTYNWAGTSHLTAGQTTH*RFWTQV Trigger: AACCTGTGTCCAAAACCTTCAGTGAGTGGTTTGGCC...AGCTGTCAAGTGTGATGTACCTGCCCAGTTGTAGGTCCCTCCAGTTTCAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | AGTCCACTTTCTTCTCAGCTGAGAGATCACATTATACCAGGGTATCCTGGGAATTCCCGGAACTCCAACTaGATGCTCGTCACTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSQLRDHIIPGYPGNSRNSN*MLVTSA Trigger: GGCAGAAGTGACGAGCATTCAGTTGGAGTTCCGGGA...ATTCCCAGGATACCCTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAAAGTGGGCAAATCCAGTaGCAATGTTCACATCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQSGQIQ*QCSHQS Trigger: ACTCTGATGTGAACATTGGCACTGGATTTGCCCACT...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | ACAGTACCTCTTCAGAGGGCCACAGGGCAGTTACTGTCATCCCTTGACACCAGCTTTCCATATCTTGGATaGCAAAACCAGAGGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVPLQRATGQLLSSLDTSFPYLG*QNQRFD Trigger: ATCAAACCTCTGGTTTTGGCATCCAAGATATGGAAA...GCTGGTGTCAAGGGATGACAGTAACTGCCCTGTGGCCCTCTGAAGAGGTACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | AGACAAATTTACTGTTCTAACCCCCGCCAGCCCAGTAGGGTAGCCAGGAGGATCACCCATTTCCTGGCTTaGTTAAATTCTTGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQIYCSNPRQPSRVARRITHFLA*LNSCFR Trigger: TCTGAAGCAAGAATTTAAGCAAGCCAGGAAATGGGT...GATCCTCCTGGCTACCCTACTGGGCTGGCGGGGGTTAGAACAGTAAATTTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR GCA 90 bp | CCACTTTCTTCTCAGCTGAGAGATCACATTATACCAGGGTATCCTGGGAATAAGACTGTGTCTCCTTCTTaGCACCCTGGATCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLSSQLRDHIIPGYPGNKTVSPS*HPGSTV Trigger: AACAGTGGATCCAGGGTGGCAAGAAGGAGACACAGT...CTTATTCCCAGGATACCCTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR TCA 90 bp | CCACTTTCTTCTCAGCTGAGAGATCACATTATACCAGGGTATCCTGGGAATAAGCCAAAACCAGAGGTTTaGTGGAGGCTTCAGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLSSQLRDHIIPGYPGNKPKPEV*WRLQLF Trigger: AAAGAGCTGAAGCCTCCATCAAACCTCTGGTTTTGG...CTTATTCCCAGGATACCCTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR GCA 90 bp | GTAAACACCTTTGGTGTTAGAACTGGCTTGGGGTCCACGTGTTTAACAGGAAGTCACATCTTTATGATCTaGCCGAGGGTACATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNTFGVRTGLGSTCLTGSHIFMI*PRVHVE Trigger: TTCAACATGTACCCTCGGGCAGATCATAAAGATGTG...ACTTCCTGTTAAACACGTGGACCCCAAGCCAGTTCTAACACCAAAGGTGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS CCA 90 bp | ATGAGGGCCCGAGCTAGATCCATGTGGTCAGCTGGCAGGCCATGGTaGACACCCAAAGCCAGCGTCCCCGGCAGGAAGCACACTAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MRARARSMWSAGRPW*TPKASVPGRKHTKW Trigger: CCACTTAGTGTGCTTCCTGCCGGGGACGCTGGCTTTGGGTGTCCACCATGGCCTGCCAGCTGACCACATGGATCTAGCTCGGGCCCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS CCA 90 bp | TCCATGAGGGCCCGAGCTAGATCCATGTGGTCAGCTGGCAGGCCATaGTGGACACCCAAAGCCAGCGTCCCCGGCAGGAAGCACACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMRARARSMWSAGRP*WTPKASVPGRKHTK Trigger: CTTAGTGTGCTTCCTGCCGGGGACGCTGGCTTTGGGTGTCCACCATGGCCTGCCAGCTGACCACATGGATCTAGCTCGGGCCCTCATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTGGGAGTGGATGTGCTTaGTCACTTCCTCCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLYWAPASPSRPIPILYAGSGCA*SLPPRP Trigger: AGGCCGTGGAGGAAGTGACAAAGCACATCCACTCCC...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS TCA 90 bp | GAATCACATTCCGCTGTAGCCTCGAAAGCTGCTTCCATTTGTCGCTaGATCGCGCGCATCCGCTCCATTGCAGGCGTCCTGCAGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESHSAVASKAASICR*IARIRSIAGVLQTP Trigger: GGGAGTCTGCAGGACGCCTGCAATGGAGCGGATGCGCGCGATTCAGCGACAAATGGAAGCAGCTTTCGAGGCTACAGCGGAATGTGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136245.8 |
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| CDS-3UTR CAA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTAGGCCGCTGTTCGTGTaGATGAACATAGGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLYWAPASPSRPIPILYARPLFV*MNIGTS Trigger: GCTGGTGCCTATGTTCATCAACACGAACAGCGGCCT...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | TGCCCAAAACTATGTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCATCCCTGGGCTCAGGCTaGTGGGAATTCTGGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPKLCGPCEGQGPNRPTSSLGSG*WEFWTL Trigger: CAACGTCCAGAATTCCCACAAGCCTGAGCCCAGGGA...TGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCACATAGTTTTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTAAGAAGCTCTCCATCTaGTCCCTGGGCTCAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLYWAPASPSRPIPILYAKKLSI*SLGSGL Trigger: CAAGCCTGAGCCCAGGGACAAGATGGAGAGCTTCTT...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 90 bp | AAGCGGCCGTGGGCAAGTTCTCCCACGAAGGTGAGCTTTCTGGGCTaGGACTGCCGGAGCAGATGGGCTTTTATCCCCTCAATGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KRPWASSPTKVSFLG*DCRSRWAFIPSMAL Trigger: TAAAGCCATTGAGGGGATAAAAGCCCATCTGCTCCGGCAGTCTCAGCCCAGAAAGCTCACCTTCGTGGGAGAACTTGCCCACGGCCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 90 bp | TCAGACCTGTCTCCATCTGTTGGTTCATCTGGTAGCAGGTCTCCATaGGGGCCCGAGCTAGATCCATGTGGTCAGCTGGCAGGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SDLSPSVGSSGSRSP*GPELDPCGQLAGHG Trigger: ACCATGGCCTGCCAGCTGACCACATGGATCTAGCTCGGGCCCTCATGGAGACCTGCTACCAGATGAACCAACAGATGGAGACAGGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS TCA 90 bp | TCTGCAGGATTTCCCAGCCCCAGTCCTGGTACTTGCGGTCCCTTGTaGCACGGTACAGATAGAATAGGCTTTCCACCGTCTCTGGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGFPSPSPGTCGPL*HGTDRIGFPPSLAA Trigger: TGCGGCCAGAGACGGTGGAAAGCCTATTCTATCTGTACCGTGTCACAAGGGACCGCAAGTACCAGGACTGGGGCTGGGAAATCCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 90 bp | AGAGCTCCCGGAACTCCAACTGAATGCTCGTCACTTCTGCCACCGTaGTGTCTGAAGTCCACTGGGGTGAGTGGGCAAATCCAGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAPGTPTECSSLLPP*CLKSTGVSGQIQCQ Trigger: TTGGCACTGGATTTGCCCACTCACCCCAGTGGACTTCAGACAGCACGGTGGCAGAAGTGACGAGCATTCAGTTGGAGTTCCGGGAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 90 bp | GTATTCGTAGTAGCTGTCAGCCCTGGCCCCCAAGGTGAACACTCCTaGGTGGGTGAAGAGGCCGCTGTTCGTGTTGATGAACATAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFVVAVSPGPQGEHS*VGEEAAVRVDEHRH Trigger: GTGCCTATGTTCATCAACACGAACAGCGGCCTCTTCACCCACCCAGGAGTGTTCACCTTGGGGGCCAGGGCTGACAGCTACTACGAATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCTTGTGAAGGTCAGGGACCCAACAGGCCCACCTCAGTCTCCATCAGTGACCTGTCTCCATCTGTaGGTTCATCTGGTAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGLVKVRDPTGPPQSPSVTCLHL*VHLVAG Trigger: ACCTGCTACCAGATGAACCAACAGATGGAGACAGGT...CACTGATGGAGACTGAGGTGGGCCTGTTGGGTCCCTGACCTTCACAAGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CAA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAATCTGGCCGCAGCAGGTaGTGCCTGTCAGCTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQSGRSR*CLSAGL Trigger: CAAGCCAGCTGACAGGCACAACCTGCTGCGGCCAGA...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | ATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACAACCCCAGTCCTGGTACTaGCGGTCCCTTGTGACACGG | + |
|
Preference number: 5 (lower is better) Translates to: IKDRAYSMGSDTKAQLPQPQSWY*RSLVTR Trigger: CCGTGTCACAAGGGACCGCAAGTACCAGGACTGGGG...TTGTGGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | ACTCATCAAAGACAGGGCCTACTCCATGGGCTCAGACACCAAGGCACAACTACCACTAAGTGGTCCATCTaGGCACTGAAGCGGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: THQRQGLLHGLRHQGTTTTKWSI*ALKRPW Trigger: CCACGGCCGCTTCAGTGCCAAGATGGACCACTTAGT...GGTAGTTGTGCCTTGGTGTCTGAGCCCATGGAGTAGGCCCTGTCTTTGATGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS GCA 90 bp | AAGCCCAAGACGAAGAGAATCACATTCCGCTGTAGCCTCGAAAGCTaGTTCCATTTGTCGCTGAATCGCGCGCATCCGCTCCATTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPKTKRITFRCSLES*FHLSLNRAHPLHCR Trigger: CCTGCAATGGAGCGGATGCGCGCGATTCAGCGACAAATGGAAGCAGCTTTCGAGGCTACAGCGGAATGTGATTCTCTTCGTCTTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136245.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTACTGGGCACCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTGTCTGCAAACCCTTCTaGTTCAGCACTTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLYWAPASPSRPIPILYAVCKPF*FSTFLL Trigger: CAGAAGGAAAGTGCTGAACAAGAAGGGTTTGCAGAC...AGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGGTGCCCAGTAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTCCCCTTCCAGGCCCATTCCCATCTTGTATGCTTTAATGAGGCTCCCAGGATGGGCTTCTGTGTaGAACACACAGCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PASPSRPIPILYALMRLPGWASV*NTQLSR Trigger: TCTGGACAGCTGTGTGTTCAACACAGAAGCCCATCC...TGGGAGCCTCATTAAAGCATACAAGATGGGAATGGGCCTGGAAGGGGAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 90 bp | CGCAGCAGGTTGTGCCTGTCAGCTGGCTTGACCTCCACATCTTTATaGTCTGCCCGAGGGTACATGTTGAAATGTGCAATCTCAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSRLCLSAGLTSTSL*SARGYMLKCAISGL Trigger: GAGCCCTGAGATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGATGTGGAGGTCAAGCCAGCTGACAGGCACAACCTGCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 90 bp | CTCGTCACTTCTGCCACCGTGCTGTCTGAAGTCCACTGGGGTGAGTaGGCAAATCCAGTGCCAATGTTCACATCAGAGTATGGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSATVLSEVHWGE*ANPVPMFTSEYGIL Trigger: CAAGATCCCATACTCTGATGTGAACATTGGCACTGGATTTGCCCACTCACCCCAGTGGACTTCAGACAGCACGGTGGCAGAAGTGACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CAA 90 bp | AGACAAATTTACTGTTCTAACCCCCGCCAGCCCAGTAGGGTAGCCAGGAGGATCTCAGAGTATGGGATCTaGGAGGGCGTAGTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQIYCSNPRQPSRVARRISEYGI*EGVVKA Trigger: TGCCTTCACTACGCCCTCCAAGATCCCATACTCTGA...GATCCTCCTGGCTACCCTACTGGGCTGGCGGGGGTTAGAACAGTAAATTTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 90 bp | CAGGTTGTGCCTGTCAGCTGGCTTGACCTCCACATCTTTATGATCTaGCCGAGGGTACATGTTGAAATGTGCAATCTCAGGGCTCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QVVPVSWLDLHIFMI*PRVHVEMCNLRAQT Trigger: GGTCTGAGCCCTGAGATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGATGTGGAGGTCAAGCCAGCTGACAGGCACAACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CAA 90 bp | GAACACAGGCCCAGAGCCTTGAGGTCCTTTCTATTCTGTCCAGTTTGCCCTATGAACTGTGTCTCCTTCTaGCCACCCTGGATCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: EHRPRALRSFLFCPVCPMNCVSF*PPWIHC Trigger: ACAGTGGATCCAGGGTGGCAAGAAGGAGACACAGTT...CATAGGGCAAACTGGACAGAATAGAAAGGACCTCAAGGCTCTGGGCCTGTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 90 bp | TTGATGAACATAGGCACCAGCCCGTCTTTCTTCCCAGACAGGGAGTaGATGTGCTTTGTCACTTCCTCCACGGCCTCCTGGAATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LMNIGTSPSFFPDRE*MCFVTSSTASWNFF Trigger: AAAGAAATTCCAGGAGGCCGTGGAGGAAGTGACAAAGCACATCCACTCCCTGTCTGGGAAGAAAGACGGGCTGGTGCCTATGTTCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 90 bp | AATTTCTTTATTCCAGTAAGACGAGAGAGCTCCCGGAACTCCAACTaGATGCTCGTCACTTCTGCCACCGTGCTGTCTGAAGTCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: NFFIPVRRESSRNSN*MLVTSATVLSEVHW Trigger: CCAGTGGACTTCAGACAGCACGGTGGCAGAAGTGACGAGCATTCAGTTGGAGTTCCGGGAGCTCTCTCGTCTTACTGGAATAAAGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 90 bp | AGACAGGCAGGACTTCTTGCTTCATCTTCTCTACTTCTGCAGGTCTaGCACTCAGAGCTTTCCACTGGTCAGCCGTATGAAGAGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: RQAGLLASSSLLLQV*HSELSTGQPYEEST Trigger: TGTACTCTCTTCATACGGCTGACCAGTGGAAAGCTCTGAGTGGCAGACCTGCAGAAGTAGAGAAGATGAAGCAAGAAGTCCTGCCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042390.5 ENSMUST00000136245.8 |
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| CDS TCA 90 bp | AGGCTTGTGGGAATTCTGGACGTTGTTGATAGAAGAATAGCCACCTaGGGGGACCCGTGTGTACTTATTGAAGCTCTGCAGGATTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLVGILDVVDRRIAT*GDPCVLIEALQDFP Trigger: TGGGAAATCCTGCAGAGCTTCAATAAGTACACACGGGTCCCCTCAGGTGGCTATTCTTCTATCAACAACGTCCAGAATTCCCACAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 90 bp | GACCTCCACATCTTTATGATCTGCCCGAGGGTACATGTTGAAATGTaGAATCTCAGGGCTCAGACCTGTCTCCATCTGTTGGTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLHIFMICPRVHVEM*NLRAQTCLHLLVHL Trigger: CAGATGAACCAACAGATGGAGACAGGTCTGAGCCCTGAGATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGATGTGGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CAA 90 bp | AGTCCACTTTCTTCTCAGCTGAGAGATCACATTATACCAGGGTATCCTGGGAATGCCAAAACCAGAGGTTaGATGGAGGCTTCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPLSSQLRDHIIPGYPGNAKTRG*MEASAL Trigger: AAGAGCTGAAGCCTCCATCAAACCTCTGGTTTTGGC...ATTCCCAGGATACCCTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CAA 90 bp | CCACTTTCTTCTCAGCTGAGAGATCACATTATACCAGGGTATCCTGGGAATAAGGACAGGCAGGACTTCTaGCTTCATCTTCTCTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSQLRDHIIPGYPGNKDRQDF*LHLLYF Trigger: GAAGTAGAGAAGATGAAGCAAGAAGTCCTGCCTGTC...CTTATTCCCAGGATACCCTGGTATAATGTGATCTCTCAGCTGAGAAGAAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS-3UTR CAA 90 bp | AAAGTTGAAACTGGAGGGACCTACAACTGGGCAGGTACATCACACTTGACAGCTGGCTTGCTTAAATTCTaGCTTCAGACCCAAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVETGGTYNWAGTSHLTAGLLKF*LQTQNP Trigger: TGGATTTTGGGTCTGAAGCAAGAATTTAAGCAAGCC...AGCTGTCAAGTGTGATGTACCTGCCCAGTTGTAGGTCCCTCCAGTTTCAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 90 bp | AAGTCTAAGTTCTCTGATACCCATTTCCTGGCTTGCTTAAATTCTTaGTTCAGACCCAAAATCCACATGGTATCCAAGGCATCGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSKFSDTHFLACLNS*FRPKIHMVSKASIR Trigger: CCTGATCGATGCCTTGGATACCATGTGGATTTTGGGTCTGAAGCAAGAATTTAAGCAAGCCAGGAAATGGGTATCAGAGAACTTAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | GCCCGAGCTAGATCCATGTGGTCAGCTGGCAGGCCATaGTGGACACCCAAAGCCAGCGTCCCCGGCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARARSMWSAGRP*WTPKASVPGRK Trigger: CTTCCTGCCGGGGACGCTGGCTTTGGGTGTCCACCATGGCCTGCCAGCTGACCACATGGATCTAGCTCGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | CGAGCTAGATCCATGTGGTCAGCTGGCAGGCCATGGTaGACACCCAAAGCCAGCGTCCCCGGCAGGAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RARSMWSAGRPW*TPKASVPGRKH Trigger: GTGCTTCCTGCCGGGGACGCTGGCTTTGGGTGTCCACCATGGCCTGCCAGCTGACCACATGGATCTAGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | GTAGCTGTCAGCCCTGGCCCCCAAGGTGAACACTCCTaGGTGGGTGAAGAGGCCGCTGTTCGTGTTGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: VAVSPGPQGEHS*VGEEAAVRVDE Trigger: TTCATCAACACGAACAGCGGCCTCTTCACCCACCCAGGAGTGTTCACCTTGGGGGCCAGGGCTGACAGCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 72 bp | ACGAAGAGAATCACATTCCGCTGTAGCCTCGAAAGCTaGTTCCATTTCCTCCAGCATGAGCGCCGCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TKRITFRCSLES*FHFLQHERRRR Trigger: CCGGCGGCGGCGCTCATGCTGGAGGAAATGGAAGCAGCTTTCGAGGCTACAGCGGAATGTGATTCTCTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 72 bp | CCACCTGAGGGGACCCGTGTGTACTTATTGAAGCTCTaGAGGATTTCCCAGCCCCAGTCCTGGTACTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPEGTRVYLLKL*RISQPQSWYLR Trigger: CCGCAAGTACCAGGACTGGGGCTGGGAAATCCTGCAGAGCTTCAATAAGTACACACGGGTCCCCTCAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | ATAGGCACCAGCCCGTCTTTCTTCCCAGACAGGGAGTaGATGTGCTTTGTCACTTCCTCCACGGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IGTSPSFFPDRE*MCFVTSSTASW Trigger: CCAGGAGGCCGTGGAGGAAGTGACAAAGCACATCCACTCCCTGTCTGGGAAGAAAGACGGGCTGGTGCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | CTGTCAGCCCTGGCCCCCAAGGTGAACACTCCTGGGTaGGTGAAGAGGCCGCTGTTCGTGTTGATGAACATA | + |
|
Preference number: 6 (lower is better) Translates to: LSALAPKVNTPG*VKRPLFVLMNI Trigger: TATGTTCATCAACACGAACAGCGGCCTCTTCACCCACCCAGGAGTGTTCACCTTGGGGGCCAGGGCTGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | CACACTAAGTGGTCCATCTTGGCACTGAAGCGGCCGTaGGCAAGTTCTCCCACGAAGGTGAGCTTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HTKWSILALKRP*ASSPTKVSFLG Trigger: GCCCAGAAAGCTCACCTTCGTGGGAGAACTTGCCCACGGCCGCTTCAGTGCCAAGATGGACCACTTAGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | TGGGCAAGTTCTCCCACGAAGGTGAGCTTTCTGGGCTaGGACTGCCGGAGCAGATGGGCTTTTATCCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WASSPTKVSFLG*DCRSRWAFIPS Trigger: TGAGGGGATAAAAGCCCATCTGCTCCGGCAGTCTCAGCCCAGAAAGCTCACCTTCGTGGGAGAACTTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | TCTCTGGCCGCAGCAGGTTGTGCCTGTCAGCTGGCTTaGCCTCCACATCTTTATGATCTGCCCGAGGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: SLAAAGCACQLA*PPHLYDLPEGT Trigger: TGTACCCTCGGGCAGATCATAAAGATGTGGAGGTCAAGCCAGCTGACAGGCACAACCTGCTGCGGCCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CAA 90 bp | ACGAAGAGAATCACATTCCGCTGTAGCCTCGAAAGCTGCTTCCATTaGTCGCTGAATCGCGCGCATCCGCTCCATTGCAGGCGTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TKRITFRCSLESCFH*SLNRAHPLHCRRPA Trigger: TGCAGGACGCCTGCAATGGAGCGGATGCGCGCGATTCAGCGACAAATGGAAGCAGCTTTCGAGGCTACAGCGGAATGTGATTCTCTTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136245.8 |
||
| CDS TCA 72 bp | TCTCCATCTGTTGGTTCATCTGGTAGCAGGTCTCCATaGGGGCCCGAGCTAGATCCATGTGGTCAGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSVGSSGSRSP*GPELDPCGQLA Trigger: TGCCAGCTGACCACATGGATCTAGCTCGGGCCCTCATGGAGACCTGCTACCAGATGAACCAACAGATGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS GCA 72 bp | ACCAGCCCGTCTTTCTTCCCAGACAGGGAGTGGATGTaGTTTGTCACTTCCTCCACGGCCTCCTGGAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSPSFFPDREWM*FVTSSTASWNF Trigger: GAAATTCCAGGAGGCCGTGGAGGAAGTGACAAAGCACATCCACTCCCTGTCTGGGAAGAAAGACGGGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS CCA 72 bp | CTCGTCACTTCTGCCACCGTGCTGTCTGAAGTCCACTaGGGTGAGTGGGCAAATCCAGTGCCAATGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: LVTSATVLSEVH*GEWANPVPMFT Trigger: TGTGAACATTGGCACTGGATTTGCCCACTCACCCCAGTGGACTTCAGACAGCACGGTGGCAGAAGTGACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS TCA 72 bp | TTTCCCAGCCCCAGTCCTGGTACTTGCGGTCCCTTGTaGCACGGTACAGATAGAATAGGCTTTCCACCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPSPSPGTCGPL*HGTDRIGFPPS Trigger: AGACGGTGGAAAGCCTATTCTATCTGTACCGTGTCACAAGGGACCGCAAGTACCAGGACTGGGGCTGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS GCA 72 bp | ACGAAGAGAATCACATTCCGCTGTAGCCTCGAAAGCTaGTTCCATTTGTCGCTGAATCGCGCGCATCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TKRITFRCSLES*FHLSLNRAHPL Trigger: GAGCGGATGCGCGCGATTCAGCGACAAATGGAAGCAGCTTTCGAGGCTACAGCGGAATGTGATTCTCTTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136245.8 |
||
| CDS CAA 72 bp | TACTTCAGGGTTTCCCCCACAAAGAAGCTCTCCATCTaGTCCCTGGGCTCAGGCTTGTGGGAATTCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: YFRVSPTKKLSI*SLGSGLWEFWT Trigger: CGTCCAGAATTCCCACAAGCCTGAGCCCAGGGACAAGATGGAGAGCTTCTTTGTGGGGGAAACCCTGAAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS TCA 72 bp | ATTCCAGTAAGACGAGAGAGCTCCCGGAACTCCAACTaGATGCTCGTCACTTCTGCCACCGTGCTGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: IPVRRESSRNSN*MLVTSATVLSE Trigger: TTCAGACAGCACGGTGGCAGAAGTGACGAGCATTCAGTTGGAGTTCCGGGAGCTCTCTCGTCTTACTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
||
| CDS GCA 72 bp | GACAGGCAGGACTTCTTGCTTCATCTTCTCTACTTCTaGAGGTCTGCCACTCAGAGCTTTCCACTGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DRQDFLLHLLYF*RSATQSFPLVS Trigger: GCTGACCAGTGGAAAGCTCTGAGTGGCAGACCTGCAGAAGTAGAGAAGATGAAGCAAGAAGTCCTGCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042390.5 ENSMUST00000136245.8 |
||
| CDS CCA 72 bp | GTGGGCAAATCCAGTGCCAATGTTCACATCAGAGTATaGGATCTTGGAGGGCGTAGTGAAGGCAGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: VGKSSANVHIRV*DLGGRSEGRHQ Trigger: CTGATGCCTGCCTTCACTACGCCCTCCAAGATCCCATACTCTGATGTGAACATTGGCACTGGATTTGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | TCTGCCACCGTGCTGTCTGAAGTCCACTGGGGTGAGTaGGCAAATCCAGTGCCAATGTTCACATCAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SATVLSEVHWGE*ANPVPMFTSEY Trigger: ATACTCTGATGTGAACATTGGCACTGGATTTGCCCACTCACCCCAGTGGACTTCAGACAGCACGGTGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CAA 72 bp | AGGGTGAGGCCCAGGCCAAACCACTCACTGAAGGTTTaGGACACAGGTTTTAGTTCATCATGGCCCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RVRPRPNHSLKV*DTGFSSSWPQA Trigger: TGCTTGGGGCCATGATGAACTAAAACCTGTGTCCAAAACCTTCAGTGAGTGGTTTGGCCTGGGCCTCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CAA 90 bp | GAGTGGGCAAATCCAGTGCCAATGTTCACATCAGAGTATGGGATCTaGGAGGGCGTAGTGAAGGCAGGCATCAGCCGTTTTCCAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: EWANPVPMFTSEYGI*EGVVKAGISRFPKS Trigger: AGATTTTGGAAAACGGCTGATGCCTGCCTTCACTACGCCCTCCAAGATCCCATACTCTGATGTGAACATTGGCACTGGATTTGCCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CAA 90 bp | AGGTACAAGTACTTCAGGGTTTCCCCCACAAAGAAGCTCTCCATCTaGTCCCTGGGCTCAGGCTTGTGGGAATTCTGGACGTTGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: RYKYFRVSPTKKLSI*SLGSGLWEFWTLLI Trigger: TATCAACAACGTCCAGAATTCCCACAAGCCTGAGCCCAGGGACAAGATGGAGAGCTTCTTTGTGGGGGAAACCCTGAAGTACTTGTACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | ATGTCTGCAAACCCTTCTTGTTCAGCACTTTCCTTCTaGGGCGCTGGTAAGACAGGCAGGACTTCTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MSANPSCSALSF*GAGKTGRTSCF Trigger: GAAGCAAGAAGTCCTGCCTGTCTTACCAGCGCCTCAGAAGGAAAGTGCTGAACAAGAAGGGTTTGCAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042390.5 ENSMUST00000136245.8 |
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| CDS TCA 72 bp | CCTCCACATCTTTATGATCTGCCCGAGGGTACATGTTaGAATGTGCAATCTCAGGGCTCAGACCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPHLYDLPEGTC*NVQSQGSDLSP Trigger: TGGAGACAGGTCTGAGCCCTGAGATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGATGTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 72 bp | GGACTTCTTGCTTCATCTTCTCTACTTCTGCAGGTCTaGCACTCAGAGCTTTCCACTGGTCAGCCGTATGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLASSSLLLQV*HSELSTGQPYE Trigger: TTCATACGGCTGACCAGTGGAAAGCTCTGAGTGGCAGACCTGCAGAAGTAGAGAAGATGAAGCAAGAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042390.5 ENSMUST00000136245.8 |
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| CDS GCA 72 bp | CCTGTCAGCTGGCTTGACCTCCACATCTTTATGATCTaGCCGAGGGTACATGTTGAAATGTGCAATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PVSWLDLHIFMI*PRVHVEMCNLR Trigger: CCTGAGATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGATGTGGAGGTCAAGCCAGCTGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CCA 72 bp | GAGTGGATGTGCTTTGTCACTTCCTCCACGGCCTCCTaGAATTTCTTTATTCCAGTAAGACGAGAGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EWMCFVTSSTAS*NFFIPVRRESS Trigger: GGAGCTCTCTCGTCTTACTGGAATAAAGAAATTCCAGGAGGCCGTGGAGGAAGTGACAAAGCACATCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS CAA 72 bp | AATCCAGTGCCAATGTTCACATCAGAGTATGGGATCTaGGAGGGCGTAGTGAAGGCAGGCATCAGCCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: NPVPMFTSEYGI*EGVVKAGISRF Trigger: AAAACGGCTGATGCCTGCCTTCACTACGCCCTCCAAGATCCCATACTCTGATGTGAACATTGGCACTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | TTGTGCCTGTCAGCTGGCTTGACCTCCACATCTTTATaGTCTGCCCGAGGGTACATGTTGAAATGTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: LCLSAGLTSTSL*SARGYMLKCAI Trigger: GATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGATGTGGAGGTCAAGCCAGCTGACAGGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | GGAATTCTGGACGTTGTTGATAGAAGAATAGCCACCTaGGGGGACCCGTGTGTACTTATTGAAGCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GILDVVDRRIAT*GDPCVLIEALQ Trigger: CTGCAGAGCTTCAATAAGTACACACGGGTCCCCTCAGGTGGCTATTCTTCTATCAACAACGTCCAGAATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS GCA 72 bp | CCGAAAATGCCTTTGCCGCTTCTGAGAGAGTATGTCTaGAAACCCTTCTTGTTCAGCACTTTCCTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PKMPLPLLREYV*KPFLFSTFLLR Trigger: CCTCAGAAGGAAAGTGCTGAACAAGAAGGGTTTGCAGACATACTCTCTCAGAAGCGGCAAAGGCATTTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042390.5 ENSMUST00000136245.8 |
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| CDS GCA 72 bp | ATCTTTATGATCTGCCCGAGGGTACATGTTGAAATGTaGAATCTCAGGGCTCAGACCTGTCTCCATCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IFMICPRVHVEM*NLRAQTCLHLL Trigger: CAACAGATGGAGACAGGTCTGAGCCCTGAGATTGCACATTTCAACATGTACCCTCGGGCAGATCATAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | GGCCCCCTAAGATGCGAATGGTGCTCTCAAACAGGTTaGCATCAACATTCTTCTGAAAGTCTAAGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPLRCEWCSQTG*HQHSSESLSSL Trigger: CAGAGAACTTAGACTTTCAGAAGAATGTTGATGTCAACCTGTTTGAGAGCACCATTCGCATCTTAGGGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042390.5 |
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| CDS TCA 72 bp | GCTCTTTCCATATCTTGGATGCCAAAACCAGAGGTTTaGTGGAGGCTTCAGCTCTTTTGTAAGGAAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALSISWMPKPEV*WRLQLFCKEVQ Trigger: CTGAACTTCCTTACAAAAGAGCTGAAGCCTCCATCAAACCTCTGGTTTTGGCATCCAAGATATGGAAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042390.5 ENSMUST00000136245.8 |
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