RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAML3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061143

Ensembl transcript IDs: ENSMUST00000118075.7, ENSMUST00000121440.4

Found 535 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAAAGGCAGGCTGGCATAGAGACCGGGAGGAGTGGAGGCAGGGGTaGGTGTGGATGGGGCCCGGCTTGGCAGACACTGAACTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: IKAGWHRDREEWRQG*VWMGPGLADTELSR
Trigger: CCTGCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCCACACTCACCCCTGCCTCCACTCCTCCCGGTCTCTATGCCAGCCTGCCTTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 90 bp GGAGAAACCAAGCGGAGGGGCAAGTGCGAGCCAAGCCCCAGCCTCTaGCTGATCCTGCCGCCAGCTTGGAGCATCATTCAAGCCCAGAGT +
Preference number: 1 (lower is better)
Translates to: GETKRRGKCEPSPSL*LILPPAWSIIQAQS
Trigger: ACTCTGGGCTTGAATGATGCTCCAAGCTGGCGGCAGGATCAGGCAGAGGCTGGGGCTTGGCTCGCACTTGCCCCTCCGCTTGGTTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 90 bp CCTCTGGGCTGGAACAGCTCCTTCTGGACCAGAAGATCCCAGGGGTaGTTAGCAGAGGAGCTCCCGTTGCCTCGATTTCCCCACCTGCTC +
Preference number: 1 (lower is better)
Translates to: PLGWNSSFWTRRSQG*LAEELPLPRFPHLL
Trigger: GAGCAGGTGGGGAAATCGAGGCAACGGGAGCTCCTCTGCTAAGCACCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCAGCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 90 bp AGGCAGGAAGGCCTAAGGGGACCTCATCTTGGGCCATGGTCCCTCTaGGCTGGAACAGCTCCTTCTGGACCAGAAGATCCCAGGGGTGCT +
Preference number: 1 (lower is better)
Translates to: RQEGLRGPHLGPWSL*AGTAPSGPEDPRGA
Trigger: AGCACCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCATGGCCCAAGATGAGGTCCCCTTAGGCCTTCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 90 bp TTGGCTATCCTGGTGAGGTGGCTGGCAGCAACACCTTACCATCCCTaGGGGTCGTCGCTGGGCAGGAGACAGACAGGCCTGGAGGATCTT +
Preference number: 1 (lower is better)
Translates to: LAILVRWLAATPYHP*GSSLGRRQTGLEDL
Trigger: AAGATCCTCCAGGCCTGTCTGTCTCCTGCCCAGCGACGACCCTCAGGGATGGTAAGGTGTTGCTGCCAGCCACCTCACCAGGATAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 90 bp AAACCAAGCGGAGGGGCAAGTGCGAGCCAAGCCCCAGCCTCTGCCTaGTCCTGCCGCCAGCTTGGAGCATCATTCAAGCCCAGAGTTTGT +
Preference number: 1 (lower is better)
Translates to: KPSGGASASQAPASA*SCRQLGASFKPRVC
Trigger: ACAAACTCTGGGCTTGAATGATGCTCCAAGCTGGCGGCAGGATCAGGCAGAGGCTGGGGCTTGGCTCGCACTTGCCCCTCCGCTTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 90 bp GGTCGTCGCTGGGCAGGAGACAGACAGGCCTGGAGGATCTTGGCTTaGTTCCTAGGGCCAGCTCAGGTGAGCTCACAGTTCTTTGTTCCT +
Preference number: 1 (lower is better)
Translates to: GRRWAGDRQAWRILA*FLGPAQVSSQFFVP
Trigger: AGGAACAAAGAACTGTGAGCTCACCTGAGCTGGCCCTAGGAACCAAGCCAAGATCCTCCAGGCCTGTCTGTCTCCTGCCCAGCGACGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 90 bp GGCACACAGCTCCTCACCCTGGTACCTCTGGCTTTACTTCCTGTCTaGGCAGGTCTGGAACTCTGGGGGATATGGAGGACAAACCAAGGG +
Preference number: 1 (lower is better)
Translates to: GTQLLTLVPLALLPV*AGLELWGIWRTNQG
Trigger: CCCTTGGTTTGTCCTCCATATCCCCCAGAGTTCCAGACCTGCTCAGACAGGAAGTAAAGCCAGAGGTACCAGGGTGAGGAGCTGTGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 90 bp GGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTaGCACCTCACCTCAGCTTTCTACTGCAGTGCACCCTGTCTGTCT +
Preference number: 1 (lower is better)
Translates to: GYGGQTKGYPLSPSP*HLTSAFYCSAPCLS
Trigger: AGACAGACAGGGTGCACTGCAGTAGAAAGCTGAGGTGAGGTGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 90 bp AAGTGCGAGCCAAGCCCCAGCCTCTGCCTGATCCTGCCGCCAGCTTaGAGCATCATTCAAGCCCAGAGTTTGTCCAGACAAGTTAACTGG +
Preference number: 1 (lower is better)
Translates to: KCEPSPSLCLILPPA*SIIQAQSLSRQVNW
Trigger: CCAGTTAACTTGTCTGGACAAACTCTGGGCTTGAATGATGCTCCAAGCTGGCGGCAGGATCAGGCAGAGGCTGGGGCTTGGCTCGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 90 bp CTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTCTaGCCTATGCACATGGCACGTGTGCATCTTCATGCCGGGATTTTT +
Preference number: 1 (lower is better)
Translates to: LPPNPGTCLEAHISF*PMHMARVHLHAGIF
Trigger: AAAAATCCCGGCATGAAGATGCACACGTGCCATGTGCATAGGTCAGAAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 90 bp GAAAACCAGCCAGATGTGTTAAACTGGATGAGAGCTCAACTAGAGTaGTGGCCACCATGGCCTCCAGCTGAAGCTGACCATCAGGGCTAC +
Preference number: 1 (lower is better)
Translates to: ENQPDVLNWMRAQLE*WPPWPPAEADHQGY
Trigger: GTAGCCCTGATGGTCAGCTTCAGCTGGAGGCCATGGTGGCCATCACTCTAGTTGAGCTCTCATCCAGTTTAACACATCTGGCTGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 90 bp CCAGTTTTGAATGGTTCTGGCTCTGGATCAATAAACAGACTACGATaGACCTTCTCCCTCCCTTTCACGGCATCCCTCAGGGTGCTCCAG +
Preference number: 1 (lower is better)
Translates to: PVLNGSGSGSINRLR*TFSLPFTASLRVLQ
Trigger: CTGGAGCACCCTGAGGGATGCCGTGAAAGGGAGGGAGAAGGTCCATCGTAGTCTGTTTATTGATCCAGAGCCAGAACCATTCAAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 90 bp CACTTAAGTCCCCACAGGCTCCGGTCTTCTGTAGTAAGATGTATGTaGAGACAGAGAAGGAAGCCAGTTTGTAGGATGTATGTGTGCTCT +
Preference number: 1 (lower is better)
Translates to: HLSPHRLRSSVVRCM*RQRRKPVCRMYVCS
Trigger: AGAGCACACATACATCCTACAAACTGGCTTCCTTCTCTGTCTTCACATACATCTTACTACAGAAGACCGGAGCCTGTGGGGACTTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 90 bp CCTCCCTTTCCTCTCTTCAGCATCCAGATAGTTAAGACGGAGTTATaGAGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCT +
Preference number: 1 (lower is better)
Translates to: PPFPLFSIQIVKTEL*SSAFPSLTFDICLP
Trigger: AGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACTGCATAACTCCGTCTTAACTATCTGGATGCTGAAGAGAGGAAAGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCACCTGAGGGTCGTCGCTaGGCAGGAGACAGACAGGCC +
Preference number: 2 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAPEGRR*AGDRQA
Trigger: GGCCTGTCTGTCTCCTGCCCAGCGACGACCCTCAGG...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CAA 90 bp GGGTCGTCGCTGGGCAGGAGACAGACAGGCCTGGAGGATCTTGGCTaGGTTCCTAGGGCCAGCTCAGGTGAGCTCACAGTTCTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: GSSLGRRQTGLEDLG*VPRASSGELTVLCS
Trigger: GGAACAAAGAACTGTGAGCTCACCTGAGCTGGCCCTAGGAACCAAGCCAAGATCCTCCAGGCCTGTCTGTCTCCTGCCCAGCGACGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAGGATGGGGCCCGGCTTaGCAGACACTGAACTCAGCA +
Preference number: 2 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAGWGPA*QTLNSA
Trigger: TGCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCC...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCACAGGCCATTCCTCCCTaGGGACAGCAGGAGTATGGG +
Preference number: 2 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAQAIPP*GQQEYG
Trigger: CCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTG...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CAA 90 bp TTCTGGACCAGAAGATCCCAGGGGTGCTTAGCAGAGGAGCTCCCGTaGCCTCGATTTCCCCACCTGCTCTCTACATCCCTTCTCTGCGGG +
Preference number: 2 (lower is better)
Translates to: FWTRRSQGCLAEELP*PRFPHLLSTSLLCG
Trigger: CCCGCAGAGAAGGGATGTAGAGAGCAGGTGGGGAAATCGAGGCAACGGGAGCTCCTCTGCTAAGCACCCCTGGGATCTTCTGGTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGCCACGGAGCTGGGGATaGACACCTGTGCCTTCTACT +
Preference number: 2 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLPRSWG*TPVPST
Trigger: AGTAGAAGGCACAGGTGTCCATCCCCAGCTCCGTGG...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGATGGTCCCTCTGGGCTaGAACAGCTCCTTCTGGACC +
Preference number: 2 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLMVPLG*NSSFWT
Trigger: GGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCAT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAGAGCTCAACTAGAGTaGTGGCCACCATGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLRAQLE*WPPWPP
Trigger: TGGAGGCCATGGTGGCCATCACTCTAGTTGAGCTCT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAAGTTGGCTATCCTGGTaGGGTGGCTGGCAGCAACAC +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQSWLSW*GGWQQH
Trigger: GTGTTGCTGCCAGCCACCTCACCAGGATAGCCAACT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGCTGTCTGAGCAGGTCTaGAACTCTGGGGGATATGGA +
Preference number: 2 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLLSEQV*NSGGYG
Trigger: TCCATATCCCCCAGAGTTCCAGACCTGCTCAGACAG...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTGCACCCTGTCTGTCTaGACTTTCTTAGGTATGGCC +
Preference number: 2 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLCTLSV*TFLGMA
Trigger: GGCCATACCTAAGAAAGTGCAGACAGACAGGGTGCA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGCACACATCTCCTTCTaGCCTATGCACATGGCACGT +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQAHISF*PMHMAR
Trigger: ACGTGCCATGTGCATAGGTCAGAAGGAGATGTGTGC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGCTTTACTTCCTGTCTaGGCAGGTCTGGAACTCTGG +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQALLPV*AGLELW
Trigger: CCAGAGTTCCAGACCTGCTCAGACAGGAAGTAAAGC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCAGAAGATCCCAGGGGTaGTTAGCAGAGGAGCTCCCG +
Preference number: 2 (lower is better)
Translates to: ETVDFPRGGRDSSITFARRRSQG*LAEELP
Trigger: CGGGAGCTCCTCTGCTAAGCACCCCTGGGATCTTCT...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACACAGCTCCTCACCCTaGTACCTCTGGCTTTACTTC +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQHSSSP*YLWLYF
Trigger: GAAGTAAAGCCAGAGGTACCAGGGTGAGGAGCTGTG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCACGTCCTCTCTACTTaGTTGCTCTGTGGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKHVLST*LLCGSQ
Trigger: CTGACTTCCACAGAGCAATCAAGTAGAGAGGACGTG...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCGGCTTGGCAGACACTaGACTCAGCAGGAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: ETVDFPRGGRDSSITFARRLGRH*TQQEVF
Trigger: GAAGACTTCCTGCTGAGTTCAGTGTCTGCCAAGCCG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAATCGATGACACCATCTaGAAGAACTGGGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAIDDTI*KNWASS
Trigger: TGAAGATGCCCAGTTCTTTCAGATGGTGTCATCGAT...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAAAGGGACAAGGCTTGTaGCCATGGAGACTGTTCACT +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQKGQGL*PWRLFT
Trigger: AGTGAACAGTCTCCATGGTCACAAGCCTTGTCCCTT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGGGGATGGACACCTGTaGCTTCTACTGTCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILGDGHL*LLLSAG
Trigger: TCCGGCTGACAGTAGAAGGCACAGGTGTCCATCCCC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCTCTACATCCCTTCTCTaGGGGCAGGTATCGGCACGT +
Preference number: 2 (lower is better)
Translates to: ETVDFPRGGRDSSITFARSTSLL*GQVSAR
Trigger: ACGTGCCGATACCTGCCCGCAGAGAAGGGATGTAGA...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAATGTGTGCTCTGATATaGGCACGCACGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQMCALI*ARTCVC
Trigger: ACACACACACGTGCGTGCGCATATCAGAGCACACAT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGAGCTTTCTACTGCAGTaGACCCTGTCTGTCTGCACT +
Preference number: 2 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKSFLLQ*TLSVCT
Trigger: AGTGCAGACAGACAGGGTGCACTGCAGTAGAAAGCT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACCATCTCTCTGGCCCTaGCATTTTCTGAACTCTCTG +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQPSLWP*HFLNSL
Trigger: CAGAGAGTTCAGAAAATGGCAGGGCCAGAGAGATGG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGATGAGCCATCTCTCTaGCCCTGCCATTTTCTGAAC +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQDEPSL*PCHFLN
Trigger: GTTCAGAAAATGGCAGGGCCAGAGAGATGGCTCATC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGAAGTGCCCACCTCCATaGCAAGACTGCTATGGTTTC +
Preference number: 2 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKKCPPP*QDCYGF
Trigger: GAAACCATAGCAGTCTTGCCATGGAGGTGGGCACTT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGCTATCCTGGTGAGGTaGCTGGCAGCAACACCTTAC +
Preference number: 2 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILAILVR*LAATPY
Trigger: GTAAGGTGTTGCTGCCAGCCACCTCACCAGGATAGC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGCCAGATGTGTTAAACTaGATGAGAGCTCAACTAGAG +
Preference number: 2 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLPDVLN*MRAQLE
Trigger: CTCTAGTTGAGCTCTCATCCAGTTTAACACATCTGG...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCACGTCCTCTCTACTTaGTTGCTCTGTGGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: ETVDFPRGGRDSSITFARHVLST*LLCGSQ
Trigger: CTGACTTCCACAGAGCAATCAAGTAGAGAGGACGTG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGATACATCTGCCTAAATaGCTGACACTGGGACACAGA +
Preference number: 2 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKIHLPK*LTLGHR
Trigger: TCTGTGTCCCAGTGTCAGTCATTTAGGCAGATGTAT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAATAAACAGACTACGATaGACCTTCTCCCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQINRLR*TFSLPF
Trigger: GAAAGGGAGGGAGAAGGTCCATCGTAGTCTGTTTAT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATAGCCCCTTTACCAGATaGGCCATCTCTCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHSPFTR*AISLAL
Trigger: CAGGGCCAGAGAGATGGCTCATCTGGTAAAGGGGCT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGGGGATGGACACCTGTaGCTTCTACTGTCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHGDGHL*LLLSAG
Trigger: TCCGGCTGACAGTAGAAGGCACAGGTGTCCATCCCC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCCACGGAGCTGGGGATaGACACCTGTGCCTTCTACT +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHPRSWG*TPVPST
Trigger: AGTAGAAGGCACAGGTGTCCATCCCCAGCTCCGTGG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCCTGAGGGTCGTCGCTaGGCAGGAGACAGACAGGCC +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMPEGRR*AGDRQA
Trigger: GGCCTGTCTGTCTCCTGCCCAGCGACGACCCTCAGG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGAATGGTTCTGGCTCTaGATCAATAAACAGACTACG +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQEWFWL*INKQTT
Trigger: CGTAGTCTGTTTATTGATCCAGAGCCAGAACCATTC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCGGCTTGGCAGACACTaGACTCAGCAGGAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHRLGRH*TQQEVF
Trigger: GAAGACTTCCTGCTGAGTTCAGTGTCTGCCAAGCCG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGCTATCCTGGTGAGGTaGCTGGCAGCAACACCTTAC +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHAILVR*LAATPY
Trigger: GTAAGGTGTTGCTGCCAGCCACCTCACCAGGATAGC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGGATGGGGCCCGGCTTaGCAGACACTGAACTCAGCA +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIGWGPA*QTLNSA
Trigger: TGCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGCTTTACTTCCTGTCTaGGCAGGTCTGGAACTCTGG +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHALLPV*AGLELW
Trigger: CCAGAGTTCCAGACCTGCTCAGACAGGAAGTAAAGC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAGCCCCTTTACCAGATaGGCCATCTCTCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCISPFTR*AISLAL
Trigger: CAGGGCCAGAGAGATGGCTCATCTGGTAAAGGGGCT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTACTTGATTGCTCTGTaGAAGTCAGGTGGAACGATG +
Preference number: 2 (lower is better)
Translates to: FFVPASESRNVSGSTHLLYLIAL*KSGGTM
Trigger: CATCGTTCCACCTGACTTCCACAGAGCAATCAAGTA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAATGGTCCCTCTGGGCTaGAACAGCTCCTTCTGGACC +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIMVPLG*NSSFWT
Trigger: GGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCAT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCCAGATGTGTTAAACTaGATGAGAGCTCAACTAGAG +
Preference number: 2 (lower is better)
Translates to: ETVDFPRGGRDSSITFARPDVLN*MRAQLE
Trigger: CTCTAGTTGAGCTCTCATCCAGTTTAACACATCTGG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCAGCCCACTCTGCTCTaGTGGAGACAGTTGACTTTC +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHQPTLL*WRQLTF
Trigger: GAAAGTCAACTGTCTCCACCAGAGCAGAGTGGGCTG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTCAGGCCATTCCTCCCTaGGGACAGCAGGAGTATGGG +
Preference number: 2 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVQAIPP*GQQEYG
Trigger: CCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTG...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCTCTCCCCCTCTCCCTaGCACCTCACCTCAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMLSPSP*HLTSAF
Trigger: GAAAGCTGAGGTGAGGTGCCAGGGAGAGGGGGAGAG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAAGTTTTGAATGGTTCTaGCTCTGGATCAATAAACAG +
Preference number: 2 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQSFEWF*LWINKQ
Trigger: CTGTTTATTGATCCAGAGCCAGAACCATTCAAAACT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGGTTGCAGGAAAAGCTaGGTCAGGCCCTGCTTTGAT +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHGCRKS*VRPCFD
Trigger: ATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATATCTGCCTAAATGACTaGCACTGGGACACAGAGAGG +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHICLND*HWDTER
Trigger: CCTCTCTGTGTCCCAGTGTCAGTCATTTAGGCAGAT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGGCCCTGCCATTTTCTaGACTCTCTGGCTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMGPAIF*TLWLSQ
Trigger: CTGGCTCAGCCAGAGAGTTCAGAAAATGGCAGGGCC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGATGAGCCATCTCTCTaGCCCTGCCATTTTCTGAAC +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHDEPSL*PCHFLN
Trigger: GTTCAGAAAATGGCAGGGCCAGAGAGATGGCTCATC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCTCCTTCCACCATGTTaGTTCCAGGGATTGAACTCG +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHLLPPC*FQGLNS
Trigger: CGAGTTCAATCCCTGGAACCAACATGGTGGAAGGAG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATAAGTGCCCACCTCCATaGCAAGACTGCTATGGTTTC +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHKCPPP*QDCYGF
Trigger: GAAACCATAGCAGTCTTGCCATGGAGGTGGGCACTT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGATGTATGTGTGCTCTaGTATGCGCACGCACGTGTG +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIDVCVL*YAHARV
Trigger: CACACGTGCGTGCGCATATCAGAGCACACATACATC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGTCTACATCCCTTCTCTaGGGGCAGGTATCGGCACGT +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMSTSLL*GQVSAR
Trigger: ACGTGCCGATACCTGCCCGCAGAGAAGGGATGTAGA...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAGGTCACAGTCTCCTTaGCACCACCTCTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIRSQSP*HHLFGE
Trigger: CTCTCCAAAGAGGTGGTGGCAAGGAGACTGTGACCT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTTGGAACAGCTCCTTCTaGACCAGAAGATCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVWNSSF*TRRSQG
Trigger: CCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCA...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATACTGTCTGAGCAGGTCTaGAACTCTGGGGGATATGGA +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCILSEQV*NSGGYG
Trigger: TCCATATCCCCCAGAGTTCCAGACCTGCTCAGACAG...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGAGCCGGGCAGCAGATaGAGAATGAGGAGAAACCAA +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIEPGSR*RMRRNQ
Trigger: TTGGTTTCTCCTCATTCTCCATCTGCTGCCCGGCTC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGCACACATCTCCTTCTaGCCTATGCACATGGCACGT +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMAHISF*PMHMAR
Trigger: ACGTGCCATGTGCATAGGTCAGAAGGAGATGTGTGC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGTCTGGTGGAGACAGTTaGCTTTCCACGTGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMSGGDS*LSTWWK
Trigger: CTTCCACCACGTGGAAAGTCAACTGTCTCCACCAGA...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTCTCTGTTGTGTGGTTaGATGAGAAAGGCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHSLLCG*MRKAES
Trigger: ACTCTCAGCCTTTCTCATTCAACCACACAACAGAGA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATGGCTGAGCCAGTTTTaGATGGTTCTGGCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIWLSQF*MVLALD
Trigger: ATCCAGAGCCAGAACCATTCAAAACTGGCTCAGCCA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAGCTTTCTACTGCAGTaGACCCTGTCTGTCTGCACT +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCISFLLQ*TLSVCT
Trigger: AGTGCAGACAGACAGGGTGCACTGCAGTAGAAAGCT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGCGGTATGTCAACATTaGTTCGCTTCTACAGATCAG +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHAVCQH*FASTDQ
Trigger: CTGATCTGTAGAAGCGAAGCAATGTTGACATACCGC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTCCCACTCTGCTCTGGTaGAGACAGTTGACTTTCCAC +
Preference number: 2 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVPTLLW*RQLTFH
Trigger: GTGGAAAGTCAACTGTCTCCACCAGAGCAGAGTGGG...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGCAGGTCTGGAACTCTaGGGGATATGGAGGACAAAC +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMAGLEL*GIWRTN
Trigger: GTTTGTCCTCCATATCCCCCAGAGTTCCAGACCTGC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CAA 90 bp CTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTaGACAAGCAAGGCTGATTCTGGAGTGTCATCGATGACACCATCT +
Preference number: 2 (lower is better)
Translates to: LFHLSHLIFVFLMLE*TSKADSGVSSMTPS
Trigger: AGATGGTGTCATCGATGACACTCCAGAATCAGCCTTGCTTGTCAACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAATCGATGACACCATCTaGAAGAACTGGGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIIDDTI*KNWASS
Trigger: TGAAGATGCCCAGTTCTTTCAGATGGTGTCATCGAT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATACTTGATTGCTCTGTaGAAGTCAGGTGGAACGATG +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIYLIAL*KSGGTM
Trigger: CATCGTTCCACCTGACTTCCACAGAGCAATCAAGTA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTATCCAGGAACGTGTCTaGAAGCACACATCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVIQERV*KHTSPS
Trigger: AGAAGGAGATGTGTGCTTCCAGACACGTTCCTGGAT...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATGTTGTGTGGTTGAATaGGAAAGGCTGAGAGTGATT +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCICCVVE*ERLRVI
Trigger: AATCACTCTCAGCCTTTCTCATTCAACCACACAACA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGTCTCTGTTGTGTGGTTaGATGAGAAAGGCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMSLLCG*MRKAES
Trigger: ACTCTCAGCCTTTCTCATTCAACCACACAACAGAGA...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTTGAAAGTGGAGAAATaGATTCCCATGTATGGGTTT +
Preference number: 2 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHLKVEK*IPMYGF
Trigger: AAACCCATACATGGGAATTCATTTCTCCACTTTCAA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAAGCGAACTGGGCTTTaGATTGATTCAGATAGTGAC +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIKRTGL*IDSDSD
Trigger: GTCACTATCTGAATCAATCCAAAGCCCAGTTCGCTT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGATAAACAGACTACGATaGACCTTCTCCCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMINRLR*TFSLPF
Trigger: GAAAGGGAGGGAGAAGGTCCATCGTAGTCTGTTTAT...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGAATGGTTCTGGCTCTaGATCAATAAACAGACTACG +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIEWFWL*INKQTT
Trigger: CGTAGTCTGTTTATTGATCCAGAGCCAGAACCATTC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCCAGCTTCTCATCATTaGTTGTACATTTCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMPASHH*LYISSL
Trigger: CAGGGAAGAAATGTACAAGCAATGATGAGAAGCTGG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGAAGCGAACTGGGCTTTaGATTGATTCAGATAGTGAC +
Preference number: 2 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMKRTGL*IDSDSD
Trigger: GTCACTATCTGAATCAATCCAAAGCCCAGTTCGCTT...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAATAAAACGGAGAAGTTaGCATACGTCATACAGTAGA +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIIKRRS*HTSYSR
Trigger: TCTACTGTATGACGTATGGCAACTTCTCCGTTTTAT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATTTCTTCCCTGTACCTaGCAGGAAAAAGTGATAAAT +
Preference number: 2 (lower is better)
Translates to: GLASSFTVKFILSLGLCIFLPCT*QEKVIN
Trigger: ATTTATCACTTTTTCCTGCCAGGTACAGGGAAGAAA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp GGAGGGGCAAGTGCGAGCCAAGCCCCAGCCTCTGCCTaGTCCTGCCGCCAGCTTGGAGCATCATTCAAGCCC +
Preference number: 3 (lower is better)
Translates to: GGASASQAPASA*SCRQLGASFKP
Trigger: GGGCTTGAATGATGCTCCAAGCTGGCGGCAGGATCAGGCAGAGGCTGGGGCTTGGCTCGCACTTGCCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp CTGGTGAGGTGGCTGGCAGCAACACCTTACCATCCCTaGGGGTCGTCGCTGGGCAGGAGACAGACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: LVRWLAATPYHP*GSSLGRRQTGL
Trigger: CAGGCCTGTCTGTCTCCTGCCCAGCGACGACCCTCAGGGATGGTAAGGTGTTGCTGCCAGCCACCTCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp CCTGAGGGTCGTCGCTGGGCAGGAGACAGACAGGCCTaGAGGATCTTGGCTTGGTTCCTAGGGCCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: PEGRRWAGDRQA*RILAWFLGPAQ
Trigger: CTGAGCTGGCCCTAGGAACCAAGCCAAGATCCTCCAGGCCTGTCTGTCTCCTGCCCAGCGACGACCCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp GGGGTGAGTGTGGATGGGGCCCGGCTTGGCAGACACTaGACTCAGCAGGAAGTCTTCCCACCCATGTGGCCA +
Preference number: 3 (lower is better)
Translates to: GVSVDGARLGRH*TQQEVFPPMWP
Trigger: TGGCCACATGGGTGGGAAGACTTCCTGCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCCACACTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTGGATGGGGCCCGGCTaGGCAGACACTGAACTCAGC +
Preference number: 3 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLWMGPG*ADTELS
Trigger: GCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCCA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGTGGATGGGGCCCGGCTaGGCAGACACTGAACTCAGC +
Preference number: 3 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWWMGPG*ADTELS
Trigger: GCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCCA...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp TGGGCCATGGTCCCTCTGGGCTGGAACAGCTCCTTCTaGACCAGAAGATCCCAGGGGTGCTTAGCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: WAMVPLGWNSSF*TRRSQGCLAEE
Trigger: CTCCTCTGCTAAGCACCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCATGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp AAGGGGACCTCATCTTGGGCCATGGTCCCTCTGGGCTaGAACAGCTCCTTCTGGACCAGAAGATCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: KGTSSWAMVPLG*NSSFWTRRSQG
Trigger: CCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCATGGCCCAAGATGAGGTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp GGCCTAAGGGGACCTCATCTTGGGCCATGGTCCCTCTaGGCTGGAACAGCTCCTTCTGGACCAGAAGATCCC +
Preference number: 3 (lower is better)
Translates to: GLRGPHLGPWSL*AGTAPSGPEDP
Trigger: GGGATCTTCTGGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCATGGCCCAAGATGAGGTCCCCTTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 72 bp GCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTaGCACCACCTCTTTGGAGAGGCACACAGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: AVPPHSGRSQSP*HHLFGEAHSSS
Trigger: TGAGGAGCTGTGTGCCTCTCCAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp GGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTaGCACCTCACCTCAGCTTTCTACTGCAGTGCACCC +
Preference number: 3 (lower is better)
Translates to: GQTKGYPLSPSP*HLTSAFYCSAP
Trigger: GGGTGCACTGCAGTAGAAAGCTGAGGTGAGGTGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp TTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTaGAGAGGCACACAGCTCCTCACCCTGGTACCTCTG +
Preference number: 3 (lower is better)
Translates to: FREVTVSLPPPL*RGTQLLTLVPL
Trigger: CAGAGGTACCAGGGTGAGGAGCTGTGTGCCTCTCCAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 72 bp TGGAACAGCTCCTTCTGGACCAGAAGATCCCAGGGGTaGTTAGCAGAGGAGCTCCCGTTGCCTCGATTTCCC +
Preference number: 3 (lower is better)
Translates to: WNSSFWTRRSQG*LAEELPLPRFP
Trigger: GGGAAATCGAGGCAACGGGAGCTCCTCTGCTAAGCACCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp GGCAGGTCCTATCAGTGCAGCCAGCCCACTCTGCTCTaGTGGAGACAGTTGACTTTCCACGTGGTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GRSYQCSQPTLL*WRQLTFHVVEE
Trigger: CTCTTCCACCACGTGGAAAGTCAACTGTCTCCACCAGAGCAGAGTGGGCTGGCTGCACTGATAGGACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp CCAAGCCCCAGCCTCTGCCTGATCCTGCCGCCAGCTTaGAGCATCATTCAAGCCCAGAGTTTGTCCAGACAA +
Preference number: 3 (lower is better)
Translates to: PSPSLCLILPPA*SIIQAQSLSRQ
Trigger: TTGTCTGGACAAACTCTGGGCTTGAATGATGCTCCAAGCTGGCGGCAGGATCAGGCAGAGGCTGGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp TGGCGGCAAGCCCCTTTACCAGATGAGCCATCTCTCTaGCCCTGCCATTTTCTGAACTCTCTGGCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: WRQAPLPDEPSL*PCHFLNSLAEP
Trigger: TGGCTCAGCCAGAGAGTTCAGAAAATGGCAGGGCCAGAGAGATGGCTCATCTGGTAAAGGGGCTTGCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp AGCTGGGCCCTTCTTAAGCATAGTTGGCTATCCTGGTaGGGTGGCTGGCAGCAACACCTTACCATCCCTGAG +
Preference number: 3 (lower is better)
Translates to: SWALLKHSWLSW*GGWQQHLTIPE
Trigger: CTCAGGGATGGTAAGGTGTTGCTGCCAGCCACCTCACCAGGATAGCCAACTATGCTTAAGAAGGGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp CTCCTCACCCTGGTACCTCTGGCTTTACTTCCTGTCTaGGCAGGTCTGGAACTCTGGGGGATATGGAGGACA +
Preference number: 3 (lower is better)
Translates to: LLTLVPLALLPV*AGLELWGIWRT
Trigger: TGTCCTCCATATCCCCCAGAGTTCCAGACCTGCTCAGACAGGAAGTAAAGCCAGAGGTACCAGGGTGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp GAGTTAGCAGGCTTGGCGGCAAGCCCCTTTACCAGATaGGCCATCTCTCTGGCCCTGCCATTTTCTGAACTC +
Preference number: 3 (lower is better)
Translates to: ELAGLAASPFTR*AISLALPFSEL
Trigger: GAGTTCAGAAAATGGCAGGGCCAGAGAGATGGCTCATCTGGTAAAGGGGCTTGCCGCCAAGCCTGCTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 72 bp CCTCGATTTCCCCACCTGCTCTCTACATCCCTTCTCTaGGGGCAGGTATCGGCACGTCCTCTCTACTTGATT +
Preference number: 3 (lower is better)
Translates to: PRFPHLLSTSLL*GQVSARPLYLI
Trigger: AATCAAGTAGAGAGGACGTGCCGATACCTGCCCGCAGAGAAGGGATGTAGAGAGCAGGTGGGGAAATCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 72 bp AGGGCCAGCTCAGGTGAGCTCACAGTTCTTTGTTCCTaGCTCCGAATCCAGGAACGTGTCTGGAAGCACACA +
Preference number: 3 (lower is better)
Translates to: RASSGELTVLCS*LRIQERVWKHT
Trigger: TGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAACTGTGAGCTCACCTGAGCTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 72 bp CTCTCCCTGGCACCTCACCTCAGCTTTCTACTGCAGTaGACCCTGTCTGTCTGCACTTTCTTAGGTATGGCC +
Preference number: 3 (lower is better)
Translates to: LSLAPHLSFLLQ*TLSVCTFLGMA
Trigger: GGCCATACCTAAGAAAGTGCAGACAGACAGGGTGCACTGCAGTAGAAAGCTGAGGTGAGGTGCCAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACTGGCTGAGCCAGTTTaGAATGGTTCTGGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQLAEPV*NGSGSG
Trigger: TCCAGAGCCAGAACCATTCAAAACTGGCTCAGCCAG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp AGGTCCTATCAGTGCAGCCAGCCCACTCTGCTCTGGTaGAGACAGTTGACTTTCCACGTGGTGGAAGAGATT +
Preference number: 3 (lower is better)
Translates to: RSYQCSQPTLLW*RQLTFHVVEEI
Trigger: AATCTCTTCCACCACGTGGAAAGTCAACTGTCTCCACCAGAGCAGAGTGGGCTGGCTGCACTGATAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp TTTGGAGAGGCACACAGCTCCTCACCCTGGTACCTCTaGCTTTACTTCCTGTCTGAGCAGGTCTGGAACTCT +
Preference number: 3 (lower is better)
Translates to: FGEAHSSSPWYL*LYFLSEQVWNS
Trigger: AGAGTTCCAGACCTGCTCAGACAGGAAGTAAAGCCAGAGGTACCAGGGTGAGGAGCTGTGTGCCTCTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTCTCCTTCCACCATGTaGGTTCCAGGGATTGAACTC +
Preference number: 3 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKSPSTM*VPGIEL
Trigger: GAGTTCAATCCCTGGAACCAACATGGTGGAAGGAGA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp TGGTACCTCTGGCTTTACTTCCTGTCTGAGCAGGTCTaGAACTCTGGGGGATATGGAGGACAAACCAAGGGT +
Preference number: 3 (lower is better)
Translates to: WYLWLYFLSEQV*NSGGYGGQTKG
Trigger: ACCCTTGGTTTGTCCTCCATATCCCCCAGAGTTCCAGACCTGCTCAGACAGGAAGTAAAGCCAGAGGTACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp AATCCAGGAACGTGTCTGGAAGCACACATCTCCTTCTaGCCTATGCACATGGCACGTGTGCATCTTCATGCC +
Preference number: 3 (lower is better)
Translates to: NPGTCLEAHISF*PMHMARVHLHA
Trigger: GGCATGAAGATGCACACGTGCCATGTGCATAGGTCAGAAGGAGATGTGTGCTTCCAGACACGTTCCTGGATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp CCAGATGTGTTAAACTGGATGAGAGCTCAACTAGAGTaGTGGCCACCATGGCCTCCAGCTGAAGCTGACCAT +
Preference number: 3 (lower is better)
Translates to: PDVLNWMRAQLE*WPPWPPAEADH
Trigger: ATGGTCAGCTTCAGCTGGAGGCCATGGTGGCCATCACTCTAGTTGAGCTCTCATCCAGTTTAACACATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp GTTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTaGAAGCACACATCTCCTTCTGACCTATGCACATGG +
Preference number: 3 (lower is better)
Translates to: VLCSCLRIQERV*KHTSPSDLCTW
Trigger: CCATGTGCATAGGTCAGAAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp AATGGTTCTGGCTCTGGATCAATAAACAGACTACGATaGACCTTCTCCCTCCCTTTCACGGCATCCCTCAGG +
Preference number: 3 (lower is better)
Translates to: NGSGSGSINRLR*TFSLPFTASLR
Trigger: CCTGAGGGATGCCGTGAAAGGGAGGGAGAAGGTCCATCGTAGTCTGTTTATTGATCCAGAGCCAGAACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp AGAAGCATTTTCAGCTCAGGTGGTTGCAGGAAAAGCTaGGTCAGGCCCTGCTTTGATGGAGAAGCAAGGAAC +
Preference number: 3 (lower is better)
Translates to: RSIFSSGGCRKS*VRPCFDGEARN
Trigger: GTTCCTTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGAAAATGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATTCCATCTCTCACATTaGATATTTGTCTTCCTGATG +
Preference number: 3 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAFHLSH*IFVFLM
Trigger: CATCAGGAAGACAAATATCAAATGTGAGAGATGGAA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCCTCAGACGGGGCACTaGCAGGAGGCTTTAGAAGAC +
Preference number: 3 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHPQTGH*QEALED
Trigger: GTCTTCTAAAGCCTCCTGCAAGTGCCCCGTCTGAGG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp ATGTTTACCATCCTGCTATCTGGTAAAGCTGGAGCTTaGGTAGAGGCTAGCCCACTGTCAGCCAACCTGGAA +
Preference number: 3 (lower is better)
Translates to: MFTILLSGKAGA*VEASPLSANLE
Trigger: TTCCAGGTTGGCTGACAGTGGGCTAGCCTCTACTCAAGCTCCAGCTTTACCAGATAGCAGGATGGTAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR GCA 72 bp AGACAGAGAAGGAAGCCAGTTTGTAGGATGTATGTGTaGTCTGATATGCGCACGCACGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: RQRRKPVCRMYV*SDMRTHVCVCV
Trigger: CACACACACACACACGTGCGTGCGCATATCAGAGCACACATACATCCTACAAACTGGCTTCCTTCTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp TGTTCACTTCTTAGTTTTCACTCCGGCAGGCATGTATaGGTTCCAACGAGAATGGCTGCCCAGCTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: CSLLSFHSGRHV*VPTRMAAQLWK
Trigger: CTTCCAAAGCTGGGCAGCCATTCTCGTTGGAACTCATACATGCCTGCCGGAGTGAAAACTAAGAAGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR TCA 72 bp ATCTCTCTGGCCCTGCCATTTTCTGAACTCTCTGGCTaGGCCAGTTTTGAATGGTTCTGGCTCTGGATCAAT +
Preference number: 3 (lower is better)
Translates to: ISLALPFSELSG*ASFEWFWLWIN
Trigger: ATTGATCCAGAGCCAGAACCATTCAAAACTGGCTCAGCCAGAGAGTTCAGAAAATGGCAGGGCCAGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGCGCACGTGAACCATaGGGCTCATATAAAGGTCAAAGGACAACTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCAREP*GSYKGQRTTSS
Trigger: TGAAGAAGTTGTCCTTTGACCTTTATATGAGCCCCATGGTTCACGTGCGCACACACACACACACACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATTCCATCTCTCACATTaGATATTTGTCTTCCTGATG +
Preference number: 3 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQFHLSH*IFVFLM
Trigger: CATCAGGAAGACAAATATCAAATGTGAGAGATGGAA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGAGGTCACAGTCTCCTaGCCACCACCTCTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: GLASSFTVKFILSLGLCIEVTVS*PPPLWR
Trigger: TCTCCAAAGAGGTGGTGGCAAGGAGACTGTGACCTC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTCTCCTTCCACCATGTaGGTTCCAGGGATTGAACTC +
Preference number: 3 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHSPSTM*VPGIEL
Trigger: GAGTTCAATCCCTGGAACCAACATGGTGGAAGGAGA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTTCCCTGTGTCACTCTaGAGTTTTGAAATGTGTTAT +
Preference number: 3 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHFPVSL*SFEMCY
Trigger: ATAACACATTTCAAAACTCAAGAGTGACACAGGGAA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGGAAATAAGCAATGCTaGACGTACAAAGTAAGAACA +
Preference number: 3 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMGNKQC*TYKVRT
Trigger: TGTTCTTACTTTGTACGTCAAGCATTGCTTATTTCC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATGCGCCCTGGGAGCCTaGAGCTGCGGGGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLACALGA*SCGGGG
Trigger: ACCGCCTCCCCCGCAGCTGCAGGCTCCCAGGGCGCA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATGCCGACCCCCTGGCTaGAGGCTGGCGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLACRPPG*RLAAWV
Trigger: GACCCAGGCCGCCAGCCTCCAGCCAGGGGGTCGGCA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGCGCTCAGGTGCGCCCTaGGAGCCTGCAGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWRSGAP*EPAAAG
Trigger: CCCCGCAGCTGCAGGCTCCCAGGGCGCACCTGAGCG...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGGCCGGCAGCCCTCGATaGGCTGGCGGAGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKAGSPR*AGGAAR
Trigger: TCGAGCGGCTCCGCCAGCGCATCGAGGGCTGCCGGC...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATCGCAGTTGACGTGGTaGCGCCGGCAGCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLASQLTW*RRQPSM
Trigger: CATCGAGGGCTGCCGGCGGCACCACGTCAACTGCGA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGGGGAGGACCAGAAGATaGGGGTCTGGCCTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWGRTRR*GSGLRR
Trigger: TCGCCTCAGGCCAGACCCTCATCTTCTGGTCCTCCC...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATGGGGGCTGGCTGAATaGTGGCATGCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAWGLAE*WHARDT
Trigger: GGTGTCCCTGGCATGCCAGCATTCAGCCAGCCCCCA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTGGGGGCTGGCTGAATaGTGGCATGCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLWGLAE*WHARDT
Trigger: GGTGTCCCTGGCATGCCAGCATTCAGCCAGCCCCCA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATCGGGTGCTGCTGCTTaGCGCTGCCGGCGCCCGATT +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQSGAAA*RCRRPI
Trigger: AATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTTACTCGGGTGCTGCTaGTTGCCGCTGCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKLLGCC*LPLPAP
Trigger: GGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGTGGAGGCTGGCGGCCTaGGTCCCTGGGATTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWWRLAA*VPGIGC
Trigger: ACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCA...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAGGTGGGGCTTGACCTaGGGTGTGGGCTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLRWGLT*GVGLGW
Trigger: CCAACCCAAGCCCACACCCCAGGTCAAGCCCCACCT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGAGCGTATGGTTCCTCTaGTCGGCTGAGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWSVWFL*SAEAAS
Trigger: GGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCT...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTGCCGACCCCCTGGCTaGAGGCTGGCGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLCRPPG*RLAAWV
Trigger: GACCCAGGCCGCCAGCCTCCAGCCAGGGGGTCGGCA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGATGCCAGGGACACCCTaGCTCAGACCAGGCATGACC +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLMPGTP*LRPGMT
Trigger: GGTCATGCCTGGTCTGAGCCAGGGTGTCCCTGGCAT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
3UTR CAA 72 bp CTGGGCAGGAGACAGACAGGCCTGGAGGATCTTGGCTaGGTTCCTAGGGCCAGCTCAGGTGAGCTCACAGTT +
Preference number: 4 (lower is better)
Translates to: LGRRQTGLEDLG*VPRASSGELTV
Trigger: AACTGTGAGCTCACCTGAGCTGGCCCTAGGAACCAAGCCAAGATCCTCCAGGCCTGTCTGTCTCCTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGTTCACCAGCATGCTCTaGCCGAAGCCGCTCACCATG +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWFTSML*PKPLTM
Trigger: CATGGTGAGCGGCTTCGGTCAGAGCATGCTGGTGAA...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAGCTGGACGGTTCCCATaGCACTCTGAAGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAAGRFP*HSEALE
Trigger: CTCCAAGGCTTCAGAGTGTCATGGGAACCGTCCAGC...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAGGCTGCTGTAACTGCTaGTCAGCCAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAGCCNC*SARICC
Trigger: GCAGCAGATCCTGGCTGAGCAGCAGTTACAGCAGCC...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGGGCACTCTGCTGTCCTaGCAGGGTTGGCATCATCTG +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLGTLLS*QGWHHL
Trigger: CAGATGATGCCAACCCTGGCAGGACAGCAGAGTGCC...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCCGGGGAATACCGACTaGGTGCTGCTCCTGACCGTG +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKPGNTD*VLLLTV
Trigger: CACGGTCAGGAGCAGCACGCAGTCGGTATTCCCCGG...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATGGAGGCTGGCGGCCTaGGTCCCTGGGATTGGTTGT +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQWRLAA*VPGIGC
Trigger: ACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGGCCTAGGCAAGGCCTaGCCCACAGACCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQGLGKA*PTDPFS
Trigger: GCTGAAAGGGTCTGTGGGCCAGGCCTTGCCTAGGCC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACGGCGCCCGATTTCTTaGCTCTCTGCTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQRRPIS*LSAPGS
Trigger: GGACCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTCCTGGGGTGAACCTTaGAACTGGTTGACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLSWGEP*NWLTCC
Trigger: GCAGCAGGTCAACCAGTTTCAAGGTTCACCCCAGGA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCACTGCGTGCTGCTCCTaGCCGTGGGCAGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARTACCS*PWAGSA
Trigger: TGCGCTTCCTGCCCACGGTCAGGAGCAGCACGCAGT...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTGCTGCTGCTGTTGCTaGTGCTGCCTCTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKCCCCC*CCLCSR
Trigger: TCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATGCTCAGCCAGGATCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQCSARI*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGATCCTGGCTGAGCA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAACTGGTTGACCTGCTaGACTGGGTATGGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLNWLTC*TGYGFR
Trigger: GCGGAACCCATACCCAGTGCAGCAGGTCAACCAGTT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTGGTCCTCGCTCAGGTaGGCCCTGGGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLWSSLR*ALGACS
Trigger: GCTGCAGGCTCCCAGGGCGCACCTGAGCGAGGACCA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAATGGCTGCCTGTGGCTaGCTGCCTAGAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAMAACG*LPRNPR
Trigger: CCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCAT...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTAGCCTTGGAGGGCCCTaGGGCCTAGGCAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLSLGGP*GLGKAW
Trigger: CCAGGCCTTGCCTAGGCCCCAGGGCCCTCCAAGGCT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGGTGGGAAGTGCTGTTTaGTCAGTCTTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWVGSAV*SVLADR
Trigger: CCGGTCAGCCAAGACTGACCAAACAGCACTTCCCAC...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGATGGCCTCACCTGGCTaGCACTCTGCTGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKMASPG*HSAVLP
Trigger: TGGCAGGACAGCAGAGTGCCAGCCAGGTGAGGCCAT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTCAGCCCTCGATGCGCTaGCGGAGCCGCTCGACTACC +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILQPSMR*RSRSTT
Trigger: GGTAGTCGAGCGGCTCCGCCAGCGCATCGAGGGCTG...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTTTGAGCTGCTCTGCTaGGGACATGTCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLFELLC*GHVRAG
Trigger: CCCAGCTCTGACATGTCCCCAGCAGAGCAGCTCAAA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGCTGGACGGTTCCCATaGCACTCTGAAGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQAGRFP*HSEALE
Trigger: CTCCAAGGCTTCAGAGTGTCATGGGAACCGTCCAGC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAGGGCAAAGAAGGCTTaGGGTCAAGTTGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLRAKKA*GQVGEG
Trigger: CCCTTCACCAACTTGACCTCAAGCCTTCTTTGCCCT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGGGCTGCTGTAACTGCTaGTCAGCCAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKGCCNC*SARICC
Trigger: GCAGCAGATCCTGGCTGAGCAGCAGTTACAGCAGCC...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACCGAGTTCACCAGCATaGTCTGACCGAAGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQPSSPA*SDRSRS
Trigger: TGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGCTGCTGCTTGCCGCTaGCGGCGCCCGATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILAAACR*RRPISW
Trigger: CCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGCAGCCTCCGCATCTTaGTGGGTTTTACTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQAASAS*WVLLGC
Trigger: GCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGCTGTTTGAGCTGCTCTaGTGGGGACATGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWLFELL*WGHVRA
Trigger: AGCTCTGACATGTCCCCAGCAGAGCAGCTCAAACAG...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGGCCATCTGTTTGAGCTaGTCTGCTGGGGACATGTCA +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLAICLS*SAGDMS
Trigger: TGACATGTCCCCAGCAGAGCAGCTCAAACAGATGGC...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAATCAGCTGGGCCCGTTaGTCCATTAGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAISWAR*SISICF
Trigger: GAAGCAGATGCTAATGGACCAACGGGCCCAGCTGAT...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGCATGTTGTACATTCCTaGTTGGCTGGTTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLHVVHS*LAGWRG
Trigger: GCCCCTCCAACCAGCCAACCAGGAATGTACAACATG...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGCATGTTGTACATTCCTaGTTGGCTGGTTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWHVVHS*LAGWRG
Trigger: GCCCCTCCAACCAGCCAACCAGGAATGTACAACATG...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCGACACTCTGAAGCCTTaGAGGGCCCTGGGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARDTLKP*RALGPR
Trigger: CCTAGGCCCCAGGGCCCTCCAAGGCTTCAGAGTGTC...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAGGCGCCATTGTTGAATaGTCCCAACTCCCCACTAGT +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAGAIVE*SQLPTS
Trigger: ACTAGTGGGGAGTTGGGACCATTCAACAATGGCGCC...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGCTGTTTGGTCAGTCTTaGCTGACCGGCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWLFGQS*LTGLQW
Trigger: CCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAG...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTTTCTCGCAGTTGACGTaGTGCCGCCGGCAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILFSQLT*CRRQPS
Trigger: CGAGGGCTGCCGGCGGCACCACGTCAACTGCGAGAA...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGCTCTCCTGGGAGAGTaGCGTCTCCATGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQALLGE*RLHGCL
Trigger: CAGACAACCATGGAGACGCCACTCTCCCAGGAGAGC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
3UTR CAA 72 bp AGAAGATCCCAGGGGTGCTTAGCAGAGGAGCTCCCGTaGCCTCGATTTCCCCACCTGCTCTCTACATCCCTT +
Preference number: 4 (lower is better)
Translates to: RRSQGCLAEELP*PRFPHLLSTSL
Trigger: AAGGGATGTAGAGAGCAGGTGGGGAAATCGAGGCAACGGGAGCTCCTCTGCTAAGCACCCCTGGGATCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAACCTTGAAACTGGTTaGCCTGCTGCACTGGGTATG +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLNLETG*PAALGM
Trigger: CATACCCAGTGCAGCAGGTCAACCAGTTTCAAGGTT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGTTCCTCTGCTCGGCTaGGGCAGCCTCCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILVPLLG*GSLRIL
Trigger: CAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAAC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTGTTGGGCAAATTGTTaGTGGCTTCCAGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKCWANC*WLPAPC
Trigger: GCACGGGGCTGGAAGCCATCAACAATTTGCCCAACA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTGTGCAAAAGGAGAGTaGGAGGCATCGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLCAKGE*EASLFT
Trigger: TGTGAAGAGCGATGCCTCTCACTCTCCTTTTGCACA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCTGCTCAGCCAGGATCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARCSARI*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGATCCTGGCTGAGCA...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGCAGTTTTGTGCTCCTTaGTGGACGGTTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWQFCAP*WTVPMT
Trigger: TGTCATGGGAACCGTCCAGCAAGGAGCACAAAACTG...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAAGCCCCTGTGGGAAGTaGTGTTTGGTCAGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQSPCGK*CLVSLG
Trigger: GCCAAGACTGACCAAACAGCACTTCCCACAGGGGCT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTACCTGGCTGGCACTCTaGTGTCCTGCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLTWLAL*CPARVG
Trigger: GCCAACCCTGGCAGGACAGCAGAGTGCCAGCCAGGT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTGGCGGCCTGGGTCCCTaGGATTGGTTGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLGGLGP*DWLCGM
Trigger: CATCCCACACAACCAATCCCAGGGACCCAGGCCGCC...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCATGCCAGGGACACCCTaGCTCAGACCAGGCATGACC +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARMPGTP*LRPGMT
Trigger: GGTCATGCCTGGTCTGAGCCAGGGTGTCCCTGGCAT...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTGGGCTGGCTGAATGCTaGCATGCCAGGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLGLAEC*HARDTL
Trigger: CAGGGTGTCCCTGGCATGCCAGCATTCAGCCAGCCC...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGGCCCTCTGTTGTTGCTaGGCAGCCATCTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKALCCC*AAICLS
Trigger: GCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGC...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGTTCCCATGACACTCTaGAGCCTTGGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILVPMTL*SLGGPW
Trigger: CCAGGGCCCTCCAAGGCTTCAGAGTGTCATGGGAAC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTGCTGCTGCTGTTGCTaGTGCTGCCTCTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLCCCCC*CCLCSR
Trigger: TCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCTGTTGCCAGTTTTGTaGTCCTTGCTGGACGGTTCC +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKLLPVL*SLLDGS
Trigger: GGAACCGTCCAGCAAGGAGCACAAAACTGGCAACAG...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGTGTAAGCTCCTCTGTTaGCAGTTTTGTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWCKLLC*QFCAPC
Trigger: GCAAGGAGCACAAAACTGGCAACAGAGGAGCTTACA...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAGTTCATCAAGCTCTTaGATCCATTCATCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLSSSSS*IHSSPG
Trigger: CCCAGGGGATGAATGGATGCAAGAGCTTGATGAACT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCTCCTGGTTGGCTGGTTaGAGGGGCACTGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARSWLAG*RGTVRG
Trigger: GCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGA...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATAGCCTTGGAGGGCCCTaGGGCCTAGGCAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHSLGGP*GLGKAW
Trigger: CCAGGCCTTGCCTAGGCCCCAGGGCCCTCCAAGGCT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGGCGCCATTGTTGAATaGTCCCAACTCCCCACTAGT +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQGAIVE*SQLPTS
Trigger: ACTAGTGGGGAGTTGGGACCATTCAACAATGGCGCC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAAGCATGATCAGCGTATaGTTCCTCTGCTCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQSMISV*FLCSAE
Trigger: CTCAGCCGAGCAGAGGAACCATACGCTGATCATGCT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGAAGATGAGGGTCTaGCCTGAGGCGATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARQKMRV*PEAIPE
Trigger: CTCTGGGATCGCCTCAGGCCAGACCCTCATCTTCTG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTATTGCCAGGCCTAGGTaGGGCTTGACCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLIARPR*GLTWGV
Trigger: CACACCCCAGGTCAAGCCCCACCTAGGCCTGGCAAT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGAACCTTGAAACTGGTTaGCCTGCTGCACTGGGTATG +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKNLETG*PAALGM
Trigger: CATACCCAGTGCAGCAGGTCAACCAGTTTCAAGGTT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATGCTATGTCCTGGGGTaGACCTTGAAACTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQCYVLG*TLKLVD
Trigger: GTCAACCAGTTTCAAGGTTCACCCCAGGACATAGCA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTTCACCAGCATGCTCTaGCCGAAGCCGCTCACCATG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLFTSML*PKPLTM
Trigger: CATGGTGAGCGGCTTCGGTCAGAGCATGCTGGTGAA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATACCTGTTCTCGCAGTTaGCGTGGTGCCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHTCSRS*RGAAGS
Trigger: GCTGCCGGCGGCACCACGTCAACTGCGAGAACAGGT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATCCTTTCCTAGTATGTaGAGACAGACAGACAGACAG +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLASFPSM*RQTDRQ
Trigger: CTGTCTGTCTGTCTGTCTGCACATACTAGGAAAGGA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCGTTGACCTGCTGCACTaGGTATGGGTTCCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARVDLLH*VWVPLL
Trigger: CAACAGCGGAACCCATACCCAGTGCAGCAGGTCAAC...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTATCGTCCCTGGGTTCTaGGAGGGTCCCATTCCCATC +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLIVPGF*EGPIPI
Trigger: GATGGGAATGGGACCCTCCCAGAACCCAGGGACGAT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTTCCTGGTTGGCTGGTTaGAGGGGCACTGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILSWLAG*RGTVRG
Trigger: GCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGA...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATTTTGTGCTCCTTGCTaGACGGTTCCCATGACACTC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQFCAPC*TVPMTL
Trigger: GAGTGTCATGGGAACCGTCCAGCAAGGAGCACAAAA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCTGACCGGCTTGCAATaGGTAGCTGGCGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARLTGLQ*VAGAIV
Trigger: AACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTACCAATGGCCTCACCTaGCTGGCACTCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILTNGLT*LALCCP
Trigger: AGGACAGCAGAGTGCCAGCCAGGTGAGGCCATTGGT...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATCATTGAACAGGTCCTaGATGTCGTCTTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQSLNRS*MSSSGT
Trigger: GGTTCCGGAAGACGACATCCAGGACCTGTTCAATGA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTACACTCACGCTCTCCTaGGAGAGTGGCGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLTLTLS*ESGVSM
Trigger: CATGGAGACGCCACTCTCCCAGGAGAGCGTGAGTGT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAGGAGGTAGTTGTTCATaGTCGTCTTCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQGGSCS*SSSAGC
Trigger: ACAGCCTGCAGAAGACGACCATGAACAACTACCTCC...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTAGAAGCATGCGTTTCTaGTCCTCGCTCAGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILRSMRF*SSLRCA
Trigger: GGCGCACCTGAGCGAGGACCAGAAACGCATGCTTCT...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCTTGAGGTCAAGTTGGTaGAGGGGAGATGCTGACGTC +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARLRSSW*RGDADV
Trigger: GACGTCAGCATCTCCCCTTCACCAACTTGACCTCAA...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGATGAGGGTCTGGCCTaGGGCGATCCCAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHDEGLA*GDPRET
Trigger: CGTCTCTCTGGGATCGCCTCAGGCCAGACCCTCATC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTAACTGTTGCTTCTGGTaGTCCATCAGCTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILNCCFW*SISWAR
Trigger: ACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTT...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTAACTGTTGCTTCTGGTaGTCCATCAGCTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLNCCFW*SISWAR
Trigger: ACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGATTGGTTGTGTGGGATaGCCATTCCACTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKIGCVG*PFHSDW
Trigger: CCAATCAGAGTGGAATGGGCATCCCACACAACCAAT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATACCTGGCTGGCACTCTaGTGTCCTGCCAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHTWLAL*CPARVG
Trigger: GCCAACCCTGGCAGGACAGCAGAGTGCCAGCCAGGT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGAGTTCATCAAGCTCTTaGATCCATTCATCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKSSSSS*IHSSPG
Trigger: CCCAGGGGATGAATGGATGCAAGAGCTTGATGAACT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCTCGGAGCAACCGGAGTaGTATTGGGAGTATTCACGC +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARSEQPE*YWEYSR
Trigger: GCGTGAATACTCCCAATAGCACTCCGGTTGCTCCGA...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTATGGCTGCCTGTGGCTaGCTGCCTAGAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLMAACG*LPRNPR
Trigger: CCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCAT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTAGGAACTGTTGCTTCTaGTGCTCCATCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLRNCCF*CSISWA
Trigger: GGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCT...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAGAATGCTGCAACATTTaGGTCATTCCTGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAECCNI*VIPVFM
Trigger: CATGAACACAGGAATGACCCAAATGTTGCAGCATTC...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGGCGGCCTGGGTCCCTaGGATTGGTTGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHGGLGP*DWLCGM
Trigger: CATCCCACACAACCAATCCCAGGGACCCAGGCCGCC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGGCCTAGGCAAGGCCTaGCCCACAGACCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHGLGKA*PTDPFS
Trigger: GCTGAAAGGGTCTGTGGGCCAGGCCTTGCCTAGGCC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTGTGGGAAGTGCTGTTTaGTCAGTCTTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLVGSAV*SVLADR
Trigger: CCGGTCAGCCAAGACTGACCAAACAGCACTTCCCAC...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGCGCAGCATAGGCCATaGGTGGGTTCATCACTCCTT +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILAQHRP*VGSSLL
Trigger: AAGGAGTGATGAACCCACCCATGGCCTATGCTGCGC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAAATGCCCATTCCACTCTaGTTGGAATGCTGCAACATT +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQMPIPL*LECCNI
Trigger: AATGTTGCAGCATTCCAATCAGAGTGGAATGGGCAT...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTCATGCCCGCATTCTGTaGAATCAACCTCGATGCTCG +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLHARIL*NQPRCS
Trigger: CGAGCATCGAGGTTGATTGCACAGAATGCGGGCATG...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTCATGCCCGCATTCTGTaGAATCAACCTCGATGCTCG +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILHARIL*NQPRCS
Trigger: CGAGCATCGAGGTTGATTGCACAGAATGCGGGCATG...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTCTGTTGCCAGTTTTGTaGTCCTTGCTGGACGGTTCC +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILLLPVL*SLLDGS
Trigger: GGAACCGTCCAGCAAGGAGCACAAAACTGGCAACAG...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACAGGCTGTTTGCCATTaGAGGCACTATAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQQAVCH*RHYSVL
Trigger: CAAAACACTATAGTGCCTGCAATGGCAAACAGCCTG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGGTCTTTACTTCTCACTaGCTGTCCAACTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKVFTSH*LSNSVL
Trigger: AAGGACAGAGTTGGACAGCCAGTGAGAAGTAAAGAC...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTATCAGCTGGGCCCGTTaGTCCATTAGCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILISWAR*SISICF
Trigger: GAAGCAGATGCTAATGGACCAACGGGCCCAGCTGAT...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCGTAGCCATCGTCCCTaGGTTCTGGGAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHRSHRP*VLGGSH
Trigger: ATGGGACCCTCCCAGAACCCAGGGACGATGGCTACG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTTTGTACATTCCTGGTTaGCTGGTTGGAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILLYIPG*LVGGAL
Trigger: CAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAA...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGAGGTCTGTACTGTCTaGGAGGCCAGGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHEVCTV*EAREGS
Trigger: GCTGCCTTCCCTGGCCTCCCAGACAGTACAGACCTC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGCTTGGGTTGGAGTCTaGGGGGACTGGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHAWVGV*GDWTAQ
Trigger: CTGTGCTGTCCAGTCCCCCCAGACTCCAACCCAAGC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTGGTTGTTAAAGGCTTaGGGGTACATCATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKWLLKA*GYIIGL
Trigger: TAGCCCAATGATGTACCCCCAAGCCTTTAACAACCA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
3UTR CAA 72 bp CTGCCGCCAGCTTGGAGCATCATTCAAGCCCAGAGTTaGTCCAGACAAGTTAACTGGCCTGTTATGATCCTG +
Preference number: 4 (lower is better)
Translates to: LPPAWSIIQAQS*SRQVNWPVMIL
Trigger: CAGGATCATAACAGGCCAGTTAACTTGTCTGGACAAACTCTGGGCTTGAATGATGCTCCAAGCTGGCGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTGCTGCTGCTGCCTCTaGTCCCGAAGGAACTGTTGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHCCCCL*SRRNCC
Trigger: GCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTGTCCCATTCCCATCATaGCCGCATTCTGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLVPFPS*PHSVQS
Trigger: TGATTGCACAGAATGCGGGCATGATGGGAATGGGAC...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCCGAGTTCACCAGCATaGTCTGACCGAAGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHPSSPA*SDRSRS
Trigger: TGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTGTTGAGGGTTCTCACTaGGCCAGTGTTAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLVEGSH*ASVSIH
Trigger: ATGGATGCTAACACTGGCGCAGTGAGAACCCTCAAC...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCTTCTGCAGGCTGTTTaGCATTGCAGGCACTATAGT +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARLLQAV*HCRHYS
Trigger: ACTATAGTGCCTGCAATGGCAAACAGCCTGCAGAAG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATATCGTCCCTGGGTTCTaGGAGGGTCCCATTCCCATC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHIVPGF*EGPIPI
Trigger: GATGGGAATGGGACCCTCCCAGAACCCAGGGACGAT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTTTTGTGCTCCTTGCTaGACGGTTCCCATGACACTC +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLFCAPC*TVPMTL
Trigger: GAGTGTCATGGGAACCGTCCAGCAAGGAGCACAAAA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AACTGGGCATCTTCAGGCCATTCCTCCCTGGGGACAGCAGGAGTATGGGTGTGGTGTACCCAAGTTATTTaGCTGCTGACTGATCATATT +
Preference number: 4 (lower is better)
Translates to: NWASSGHSSLGTAGVWVWCTQVI*LLTDHI
Trigger: AATATGATCAGTCAGCAGCCAAATAACTTGGGTACA...CCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGGCCTGAAGATGCCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGAAGTCCGCATTAAAATaGGTCAGAGGCTTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKKSALK*VRGLVL
Trigger: CAACACTAAGCCTCTGACCCATTTTAATGCGGACTT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTCCTGGGGTGAACCTTaGAACTGGTTGACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHSWGEP*NWLTCC
Trigger: GCAGCAGGTCAACCAGTTTCAAGGTTCACCCCAGGA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGATCCCCACAGCCATTaGCAGGGAGCCTGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIDPHSH*QGACRS
Trigger: AGAACGGCAGGCTCCCTGTCAATGGCTGTGGGGATC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTTGGTCCATTAGCATCTaGTTCATGATGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILWSISI*FMMAAC
Trigger: ACAGGCAGCCATCATGAAGCAGATGCTAATGGACCA...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATAACTGGTTGACCTGCTaGACTGGGTATGGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHNWLTC*TGYGFR
Trigger: GCGGAACCCATACCCAGTGCAGCAGGTCAACCAGTT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATAGCCCCTGTGGGAAGTaGTGTTTGGTCAGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHSPCGK*CLVSLG
Trigger: GCCAAGACTGACCAAACAGCACTTCCCACAGGGGCT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAGGCCTGGCCCTGGTTaGTCGCAGCAAAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIRPGPG*SQQSCH
Trigger: GTGGCAACTTTGCTGCGAGCAACCAGGGCCAGGCCT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATTCATCACTCCTTTCTaGTTAATGAGAAGCATGCGT +
Preference number: 4 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQFITPF*LMRSMR
Trigger: ACGCATGCTTCTCATTAAGCAGAAAGGAGTGATGAA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCCATTCCACTCTGATTaGAATGCTGCAACATTTGGG +
Preference number: 4 (lower is better)
Translates to: ETVDFPRGGRDSSITFARPFHSD*NAATFG
Trigger: CCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCTGACCGGCTTGCAATaGGTAGCTGGCGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHLTGLQ*VAGAIV
Trigger: AACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGCATCCATGACGGGCTaGCTCAGCCCCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMASMTG*LSPCGK
Trigger: CTTCCCACAGGGGCTGAGCCAGCCCGTCATGGATGC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTGGGCTGGCTGAATGCTaGCATGCCAGGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVGLAEC*HARDTL
Trigger: CAGGGTGTCCCTGGCATGCCAGCATTCAGCCAGCCC...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGAGTTCTTGCCACTCTTaGTCATTCAGGTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKSSCHS*SFRLMS
Trigger: TGACATTAACCTGAATGACCAAGAGTGGCAAGAACT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGTTCCCATGACACTCTaGAGCCTTGGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMVPMTL*SLGGPW
Trigger: CCAGGGCCCTCCAAGGCTTCAGAGTGTCATGGGAAC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTGGGCAGCCATCTGTTTaGGCTGCTCTGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVGQPSV*AALLGT
Trigger: TGTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCC...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGAGGCCTGGCCCTGGTTaGTCGCAGCAAAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMRPGPG*SQQSCH
Trigger: GTGGCAACTTTGCTGCGAGCAACCAGGGCCAGGCCT...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCGTAGCCATCGTCCCTaGGTTCTGGGAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMRSHRP*VLGGSH
Trigger: ATGGGACCCTCCCAGAACCCAGGGACGATGGCTACG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTTGTACATTCCTGGTTaGCTGGTTGGAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHLYIPG*LVGGAL
Trigger: CAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTATGGCCTCACCTGGCTaGCACTCTGCTGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVMASPG*HSAVLP
Trigger: TGGCAGGACAGCAGAGTGCCAGCCAGGTGAGGCCAT...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGAGGTCTGTACTGTCTaGGAGGCCAGGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMEVCTV*EAREGS
Trigger: GCTGCCTTCCCTGGCCTCCCAGACAGTACAGACCTC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGCCTCCGCATCTTGCTaGGTTTTACTCGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIASASC*VLLGCC
Trigger: GCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGGCACTCTGCTGTCCTaGCAGGGTTGGCATCATCTG +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMGTLLS*QGWHHL
Trigger: CAGATGATGCCAACCCTGGCAGGACAGCAGAGTGCC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAGGAACTGTTGCTTCTaGTGCTCCATCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIRNCCF*CSISWA
Trigger: GGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTACTGCCACAGAGACTaGATTAAGGAGATAGCCATT +
Preference number: 4 (lower is better)
Translates to: FFVPASESRNVSGSTHLLYCHRD*IKEIAI
Trigger: AATGGCTATCTCCTTAATCCAGTCTCTGTGGCAGTA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATCCCAGAGAGACGTGTaGAAAAGGAGAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCISQRDV*KRRVRG
Trigger: GCCTCTCACTCTCCTTTTGCACACGTCTCTCTGGGA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTTCATGGTCGTCTTCTaGAGGCTGTTTGCCATTGCA +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHFMVVF*RLFAIA
Trigger: TGCAATGGCAAACAGCCTGCAGAAGACGACCATGAA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTGTTGACCTGCTGCACTaGGTATGGGTTCCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVVDLLH*VWVPLL
Trigger: CAACAGCGGAACCCATACCCAGTGCAGCAGGTCAAC...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATACTGTTTGGTCAGTCTTaGCTGACCGGCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCILFGQS*LTGLQW
Trigger: CCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAG...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGACGTCCCATAGCTGCTaGGTTGAGGGTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMTSHSC*VEGSHC
Trigger: GCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGT...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTGACAGCACAGTTAGCTaGCGAGCTGGCAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVDSTVS*RAGRVL
Trigger: CAAAACCCTGCCAGCTCGCCAGCTAACTGTGCTGTC...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
3UTR CAA 72 bp ACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGTaGGTTCCAGGGATTGAACTCGAGTTAGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TTSSSKFSPSTM*VPGIELELAGL
Trigger: CAAGCCTGCTAACTCGAGTTCAATCCCTGGAACCAACATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATATGCCCATTCCACTCTaGTTGGAATGCTGCAACATT +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHMPIPL*LECCNI
Trigger: AATGTTGCAGCATTCCAATCAGAGTGGAATGGGCAT...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATCTTCAAAGTCTTCATTaGACAGGTCCTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHLQSLH*TGPGCR
Trigger: ACGACATCCAGGACCTGTTCAATGAAGACTTTGAAG...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGTCCCATTCCCATCATaGCCGCATTCTGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIVPFPS*PHSVQS
Trigger: TGATTGCACAGAATGCGGGCATGATGGGAATGGGAC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATTTGCCCTCTGTTGTTaGTGGGCAGCCATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIFALCC*WAAICL
Trigger: CAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGGCACTATAGTGTTTTaGTTGTTAAAGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHGTIVF*LLKAWG
Trigger: CCCCCAAGCCTTTAACAACCAAAACACTATAGTGCC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAAGCATAGGCCATGGGTaGGTTCATCACTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCISIGHG*VHHSFL
Trigger: CAGAAAGGAGTGATGAACCCACCCATGGCCTATGCT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
3UTR CAA 72 bp CTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTaGACAAGCAAGGCTGATTCTGGAGTGTCATCGATG +
Preference number: 4 (lower is better)
Translates to: LSHLIFVFLMLE*TSKADSGVSSM
Trigger: CATCGATGACACTCCAGAATCAGCCTTGCTTGTCAACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCAGTTTTGTGCTCCTTaGTGGACGGTTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMQFCAP*WTVPMT
Trigger: TGTCATGGGAACCGTCCAGCAAGGAGCACAAAACTG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATGTAAGCTCCTCTGTTaGCAGTTTTGTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCICKLLC*QFCAPC
Trigger: GCAAGGAGCACAAAACTGGCAACAGAGGAGCTTACA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGTTGAGGGTTCTCACTaGGCCAGTGTTAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMVEGSH*ASVSIH
Trigger: ATGGATGCTAACACTGGCGCAGTGAGAACCCTCAAC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTCAAGATCCTTTCGGATaGGCTTGCTTGTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVQDPFG*ACLWER
Trigger: TCTCTCCCACAAGCAAGCGCATCCGAAAGGATCTTG...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATACTTCCGGAACCGTGTTaGCCAGTTCGTCTATTAGTT +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCILPEPC*PVRLLV
Trigger: AACTAATAGACGAACTGGCCAACACGGTTCCGGAAG...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
3UTR CAA 72 bp CACAGAGAGGACCCTAAAAGCGAACTGGGCTTTGGATaGATTCAGATAGTGACATTTTATTGGTTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HREDPKSELGFG*IQIVTFYWLVA
Trigger: AGCAACCAACCAATAAAATGTCACTATCTGAATCAATCCAAAGCCCAGTTCGCTTTTAGGGTCCTCTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGTGCTCAGGCTGCTGTTaGTGCAGATACTACTACCAT +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMCSGCC*CRYYYH
Trigger: ATGGTAGTAGTATCTGCATCAACAGCAGCCTGAGCA...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGAGAACAGCTTGTTCTaGTTAGAAAGGGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMENSLF*LERDVS
Trigger: GGAGACGTCCCTTTCTAATCAGAACAAGCTGTTCTC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGTTGCTTCTGCTGCATaGGTTTTGCCCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMVASAA*VLPSVV
Trigger: AACAACAGAGGGCAAAACTCATGCAGCAGAAGCAAC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR GCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTATTGGTTGTGTGGGATaGCCATTCCACTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVIGCVG*PFHSDW
Trigger: CCAATCAGAGTGGAATGGGCATCCCACACAACCAAT...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATACCATTCCACTCTGATTaGAATGCTGCAACATTTGGG +
Preference number: 4 (lower is better)
Translates to: GLASSFTVKFILSLGLCIPFHSD*NAATFG
Trigger: CCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGG...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTGAATGCTGCAACATTTaGGTCATTCCTGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVECCNI*VIPVFM
Trigger: CATGAACACAGGAATGACCCAAATGTTGCAGCATTC...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR TCA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTGCTATTTGGTTTTTCTaGAGCAAAAGCTGTTCCATA +
Preference number: 4 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVAIWFF*SKSCSI
Trigger: TATGGAACAGCTTTTGCTTCAGAAAAACCAAATAGC...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp CGCAGCCGCCGGCAGCGGGGTGATTGCCACTCGGAGCAACCGGAGTaGTATTGGGAGTATTCACGCCGATCCCGGCCCCGCCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RSRRQRGDCHSEQPE*YWEYSRRSRPRRGC
Trigger: GCAGCCTCGGCGGGGCCGGGATCGGCGTGAATACTCCCAATAGCACTCCGGTTGCTCCGAGTGGCAATCACCCCGCTGCCGGCGGCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp GCTCCAGCTGCTCCACCTGAGCCTGCTGATACCTGTTCTCGCAGTTaGCGTGGTGCCGCCGGCAGCCCTCGATGCGCTGGCGGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: APAAPPEPADTCSRS*RGAAGSPRCAGGAA
Trigger: AGCGGCTCCGCCAGCGCATCGAGGGCTGCCGGCGGCACCACGTCAACTGCGAGAACAGGTATCAGCAGGCTCAGGTGGAGCAGCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp GCTCTGACCGAAGCCGCTCACCATGCCGACCCCCTGGCTGGAGGCTaGCGGCCTGGGTCCCTGGGATTGGTTGTGTGGGATGCCCATTCC +
Preference number: 5 (lower is better)
Translates to: ALTEAAHHADPLAGG*RPGSLGLVVWDAHS
Trigger: GGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCAGCCAGGGGGTCGGCATGGTGAGCGGCTTCGGTCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CGCCGGCAGCGGGGTGATTGCCACTCGGAGCAACCGGAGTGCTATTaGGAGTATTCACGCCGATCCCGGCCCCGCCGAGGCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RRQRGDCHSEQPECY*EYSRRSRPRRGCCS
Trigger: TGAGCAGCAGCCTCGGCGGGGCCGGGATCGGCGTGAATACTCCCAATAGCACTCCGGTTGCTCCGAGTGGCAATCACCCCGCTGCCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp AGCTGCTGGTGCTGCTGCGAGAGAGCCGAGTTCACCAGCATGCTCTaGCCGAAGCCGCTCACCATGCCGACCCCCTGGCTGGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SCWCCCERAEFTSML*PKPLTMPTPWLEAG
Trigger: GCCAGCCTCCAGCCAGGGGGTCGGCATGGTGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGGCTCTCTCGCAGCAGCACCAGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp CTGGCTCCGGAGACCATGCTGCCCGACCCCGAGGGCACAGAGTTCTaGATAGGGCCTGTGGTCCGGGGAATACCGACTGCGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LAPETMLPDPEGTEF*IGPVVRGIPTACCS
Trigger: GGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAACTCTGTGCCCTCGGGGTCGGGCAGCATGGTCTCCGGAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp TGGCTGCCTGTGGCTGGCTGCCTAGAAATCCAAGGCCCCCAGGACTaGCTCCGGAGACCATGCTGCCCGACCCCGAGGGCACAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: WLPVAGCLEIQGPQD*LRRPCCPTPRAQSS
Trigger: AGAACTCTGTGCCCTCGGGGTCGGGCAGCATGGTCTCCGGAGCCAGTCCTGGGGGCCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CGAAGCCGCTCACCATGCCGACCCCCTGGCTGGAGGCTGGCGGCCTaGGTCCCTGGGATTGGTTGTGTGGGATGCCCATTCCACTCTGAT +
Preference number: 5 (lower is better)
Translates to: RSRSPCRPPGWRLAA*VPGIGCVGCPFHSD
Trigger: ATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCAGCCAGGGGGTCGGCATGGTGAGCGGCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp CTTTCAGCTGCTGGTGCTGCTGCGAGAGAGCCGAGTTCACCAGCATaGTCTGACCGAAGCCGCTCACCATGCCGACCCCCTGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSAAGAAAREPSSPA*SDRSRSPCRPPGWR
Trigger: CCTCCAGCCAGGGGGTCGGCATGGTGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGGCTCTCTCGCAGCAGCACCAGCAGCTGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp AGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTGCTTaGCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGCTCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: RQPPHLAGFYSGAAA*RCRRPISWLSAPGS
Trigger: GGACCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp GCTGAGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTaGTTGCCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AEAASASCWVLLGCC*LPLPAPDFLALCSR
Trigger: CCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp TCGGCTGAGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTaGTGCTTGCCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SAEAASASCWVLLGC*CLPLPAPDFLALCS
Trigger: GGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp TGCTCGGCTGAGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTaGTGCTGCTTGCCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: CSAEAASASCWVLLG*CCLPLPAPDFLALC
Trigger: GCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp ATCAGCGTATGGTTCCTCTGCTCGGCTGAGGCAGCCTCCGCATCTTaGTGGGTTTTACTCGGGTGCTGCTGCTTGCCGCTGCCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ISVWFLCSAEAASAS*WVLLGCCCLPLPAP
Trigger: GGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp AGCGTATGGTTCCTCTGCTCGGCTGAGGCAGCCTCCGCATCTTGCTaGGTTTTACTCGGGTGCTGCTGCTTGCCGCTGCCGGCGCCCGAT +
Preference number: 5 (lower is better)
Translates to: SVWFLCSAEAASASC*VLLGCCCLPLPAPD
Trigger: ATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACTCGGGTGCTGCTGCTaGCCGCTGCCGGCGCCCGAT +
Preference number: 5 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQLGCCC*PLPAPD
Trigger: ATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp GAGGCCAGGGAAGGCAGCCCCGACACCTTCGCCGCTATAACTGTATaGCATGTCCTGAGCAGGGGTCCGCTCATAGGCCTGGCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: EAREGSPDTFAAITV*HVLSRGPLIGLALV
Trigger: AACCAGGGCCAGGCCTATGAGCGGACCCCTGCTCAGGACATGTCATACAGTTATAGCGGCGAAGGTGTCGGGGCTGCCTTCCCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp CCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTGCTTGCCGCTaGCGGCGCCCGATTTCTTGGCTCTCTGCTCCAGGGTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PPHLAGFYSGAAACR*RRPISWLSAPGSSD
Trigger: ATCAGAGGACCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp TTTTACTCGGGTGCTGCTGCTTGCCGCTGCCGGCGCCCGATTTCTTaGCTCTCTGCTCCAGGGTCCTCTGATAGAGGCTCACGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: FYSGAAACRCRRPIS*LSAPGSSDRGSRCP
Trigger: GGGACACCGTGAGCCTCTATCAGAGGACCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp TGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCCTCTaGTCCCGAAGGAACTGTTGCTTCTGGTGCTCCATCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCL*SRRNCCFWCSISWA
Trigger: GGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCLCSRRNCCFWCS
Trigger: GGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp GCCAGGATCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGTTGCTGCTGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: ARICCCCCCCCCCCC*CCCCCLCSRRNCCF
Trigger: GAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGATCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp GCCCGTTGGTCCATTAGCATCTGCTTCATGATGGCTGCCTGTGGCTaGCTGCCTAGAAATCCAAGGCCCCCAGGACTGGCTCCGGAGACC +
Preference number: 5 (lower is better)
Translates to: ARWSISICFMMAACG*LPRNPRPPGLAPET
Trigger: GGTCTCCGGAGCCAGTCCTGGGGGCCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCATCATGAAGCAGATGCTAATGGACCAACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp TGGCTTCCAGCCCCGTGCCAAGATCCTTTCGGATGCGCTTGCTTGTaGGAGAGAAGCTCCCGTCGCAAGCGCCATTCTGCTGGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: WLPAPCQDPFGCACL*ERSSRRKRHSAGPH
Trigger: ATGGGGACCAGCAGAATGGCGCTTGCGACGGGAGCTTCTCTCCCACAAGCAAGCGCATCCGAAAGGATCTTGGCACGGGGCTGGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp GGTGCTCCATCAGCTGGGCCCGTTGGTCCATTAGCATCTGCTTCATaGTGGCTGCCTGTGGCTGGCTGCCTAGAAATCCAAGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GAPSAGPVGPLASAS*WLPVAGCLEIQGPQ
Trigger: CTGGGGGCCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCATCATGAAGCAGATGCTAATGGACCAACGGGCCCAGCTGATGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTGCTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*LCSRRNCCFWCSIS
Trigger: GCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp ATCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTaGTGCTGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: ICCCCCCCCCCCCCC*CCCLCSRRNCCFWC
Trigger: GCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp TGGCATCATCTGACGTCCCATAGCTGCTGGGTTGAGGGTTCTCACTaGGCCAGTGTTAGCATCCATGACGGGCTGGCTCAGCCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: WHHLTSHSCWVEGSH*ASVSIHDGLAQPLW
Trigger: CCACAGGGGCTGAGCCAGCCCGTCATGGATGCTAACACTGGCGCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp ATGCGCTTGCTTGTGGGAGAGAAGCTCCCGTCGCAAGCGCCATTCTaGTGGTCCCCATTTAGTGGCGATCGGGCCCCTTCCAACTTCCTC +
Preference number: 5 (lower is better)
Translates to: MRLLVGEKLPSQAPF*WSPFSGDRAPSNFL
Trigger: GAGGAAGTTGGAAGGGGCCCGATCGCCACTAAATGGGGACCAGCAGAATGGCGCTTGCGACGGGAGCTTCTCTCCCACAAGCAAGCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp CCCCTGGCTGGAGGCTGGCGGCCTGGGTCCCTGGGATTGGTTGTGTaGGATGCCCATTCCACTCTGATTGGAATGCTGCAACATTTGGGT +
Preference number: 5 (lower is better)
Translates to: PLAGGWRPGSLGLVV*DAHSTLIGMLQHLG
Trigger: ACCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCAGCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp GACGGGCTGGCTCAGCCCCTGTGGGAAGTGCTGTTTGGTCAGTCTTaGCTGACCGGCTTGCAATGGGTAGCTGGCGCCATTGTTGAATGG +
Preference number: 5 (lower is better)
Translates to: DGLAQPLWEVLFGQS*LTGLQWVAGAIVEW
Trigger: CCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGCACTTCCCACAGGGGCTGAGCCAGCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CACTGCGCCAGTGTTAGCATCCATGACGGGCTGGCTCAGCCCCTGTaGGAAGTGCTGTTTGGTCAGTCTTGGCTGACCGGCTTGCAATGG +
Preference number: 5 (lower is better)
Translates to: HCASVSIHDGLAQPL*EVLFGQSWLTGLQW
Trigger: CCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGCACTTCCCACAGGGGCTGAGCCAGCCCGTCATGGATGCTAACACTGGCGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp GACCAATGGCCTCACCTGGCTGGCACTCTGCTGTCCTGCCAGGGTTaGCATCATCTGACGTCCCATAGCTGCTGGGTTGAGGGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: DQWPHLAGTLLSCQG*HHLTSHSCWVEGSH
Trigger: GTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCAGGACAGCAGAGTGCCAGCCAGGTGAGGCCATTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CGCTTGCTTGTGGGAGAGAAGCTCCCGTCGCAAGCGCCATTCTGCTaGTCCCCATTTAGTGGCGATCGGGCCCCTTCCAACTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RLLVGEKLPSQAPFC*SPFSGDRAPSNFLF
Trigger: GAAGAGGAAGTTGGAAGGGGCCCGATCGCCACTAAATGGGGACCAGCAGAATGGCGCTTGCGACGGGAGCTTCTCTCCCACAAGCAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp GGGCACAGAGTTCTGCATAGGGCCTGTGGTCCGGGGAATACCGACTaGGTGCTGCTCCACAAAGGCAGGGTCTTTACTTCTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GHRVLHRACGPGNTD*VLLHKGRVFTSHWL
Trigger: CAGCCAGTGAGAAGTAAAGACCCTGCCTTTGTGGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAACTCTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS GCA 90 bp CCCTGGGTTCTGGGAGGGTCCCATTCCCATCATGCCCGCATTCTGTaGAATCAACCTCGATGCTCGCATGCTCTGGAGAGCCACCTGGTT +
Preference number: 5 (lower is better)
Translates to: PWVLGGSHSHHARIL*NQPRCSHALESHLV
Trigger: AACCAGGTGGCTCTCCAGAGCATGCGAGCATCGAGGTTGATTGCACAGAATGCGGGCATGATGGGAATGGGACCCTCCCAGAACCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CCTATCTCTGACTGCGCTGCTGCCGTAGCCATCGTCCCTGGGTTCTaGGAGGGTCCCATTCCCATCATGCCCGCATTCTGTGCAATCAAC +
Preference number: 5 (lower is better)
Translates to: PISDCAAAVAIVPGF*EGPIPIMPAFCAIN
Trigger: GTTGATTGCACAGAATGCGGGCATGATGGGAATGGGACCCTCCCAGAACCCAGGGACGATGGCTACGGCAGCAGCGCAGTCAGAGATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CTGCTGTCCTGCCAGGGTTGGCATCATCTGACGTCCCATAGCTGCTaGGTTGAGGGTTCTCACTGCGCCAGTGTTAGCATCCATGACGGG +
Preference number: 5 (lower is better)
Translates to: LLSCQGWHHLTSHSC*VEGSHCASVSIHDG
Trigger: CCCGTCATGGATGCTAACACTGGCGCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCAGGACAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGGGCATCAAGGGGGTTTaGTTGGGGTTGGCCATAGGG +
Preference number: 5 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLGIKGV*LGLAIG
Trigger: CCCTATGGCCAACCCCAACAAAACCCCCTTGATGCC...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp CACAGTCTCTTGCAGCATGATCAGCGTATGGTTCCTCTGCTCGGCTaGGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSLLQHDQRMVPLLG*GSLRILLGFTRVLL
Trigger: CAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCTGATCATGCTGCAAGAGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp GGCTGGAGGCTGGCGGCCTGGGTCCCTGGGATTGGTTGTGTGGGATaGCCATTCCACTCTGATTGGAATGCTGCAACATTTGGGTCATTC +
Preference number: 5 (lower is better)
Translates to: GWRLAAWVPGIGCVG*PFHSDWNAATFGSF
Trigger: GAATGACCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGGCTGTTTGGTCAGTCTaGGCTGACCGGCTTGCAATG +
Preference number: 5 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLAVWSV*ADRLAM
Trigger: CATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGC...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCATTGCTCGCAGCAAAGTaGCCACCTGCTATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLALLAAK*PPAICC
Trigger: GCAGCAGATAGCAGGTGGCAACTTTGCTGCGAGCAA...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp GAGTTCTGCATAGGGCCTGTGGTCCGGGGAATACCGACTGCGTGCTaGTCCACAAAGGCAGGGTCTTTACTTCTCACTGGCTGTCCAACT +
Preference number: 5 (lower is better)
Translates to: EFCIGPVVRGIPTAC*STKAGSLLLTGCPT
Trigger: AGTTGGACAGCCAGTGAGAAGTAAAGACCCTGCCTTTGTGGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS GCA 90 bp ACAGAGTTCTGCATAGGGCCTGTGGTCCGGGGAATACCGACTGCGTaGTGCTCCACAAAGGCAGGGTCTTTACTTCTCACTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TEFCIGPVVRGIPTA*CSTKAGSLLLTGCP
Trigger: TGGACAGCCAGTGAGAAGTAAAGACCCTGCCTTTGTGGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS GCA 90 bp TGCTTCTGGTGCTCCATCAGCTGGGCCCGTTGGTCCATTAGCATCTaGTTCATGATGGCTGCCTGTGGCTGGCTGCCTAGAAATCCAAGG +
Preference number: 5 (lower is better)
Translates to: CFWCSISWARWSISI*FMMAACGWLPRNPR
Trigger: CCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCATCATGAAGCAGATGCTAATGGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp ACTCTGCTGTCCTGCCAGGGTTGGCATCATCTGACGTCCCATAGCTaGTGGGTTGAGGGTTCTCACTGCGCCAGTGTTAGCATCCATGAC +
Preference number: 5 (lower is better)
Translates to: TLLSCQGWHHLTSHS*WVEGSHCASVSIHD
Trigger: GTCATGGATGCTAACACTGGCGCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCAGGACAGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp TGCCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTGCTCCATCAGCTaGGCCCGTTGGTCCATTAGCATCTGCTTCATGATGGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: CLCSRRNCCFWCSIS*ARWSISICFMMAAC
Trigger: ACAGGCAGCCATCATGAAGCAGATGCTAATGGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTTCCTGGTTGGCTGGTaGGAGGGGCACTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKFLVGW*EGHCKR
Trigger: CCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTCCCCTGGGCCACTTTaGATGATGGAGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKSPGPL*MMESTR
Trigger: CCTCGTGGACTCCATCATCAAAAGTGGCCCAGGGGA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS TCA 90 bp GGTTTCTCACAGCTGCTATGTCCTGGGGTGAACCTTGAAACTGGTTaGCCTGCTGCACTGGGTATGGGTTCCGCTGTTGCTGGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: GFSQLLCPGVNLETG*PAALGMGSAVAGGA
Trigger: AGCACCTCCAGCAACAGCGGAACCCATACCCAGTGCAGCAGGTCAACCAGTTTCAAGGTTCACCCCAGGACATAGCAGCTGTGAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp TTCCCATCATGCCCGCATTCTGTGCAATCAACCTCGATGCTCGCATaGTCTGGAGAGCCACCTGGTTTCTCACAGCTGCTATGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FPSCPHSVQSTSMLA*SGEPPGFSQLLCPG
Trigger: CCCAGGACATAGCAGCTGTGAGAAACCAGGTGGCTCTCCAGAGCATGCGAGCATCGAGGTTGATTGCACAGAATGCGGGCATGATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 90 bp TTCCTCTTCACAGTCTCTTGCAGCATGATCAGCGTATGGTTCCTCTaGTCGGCTGAGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGG +
Preference number: 5 (lower is better)
Translates to: FLFTVSCSMISVWFL*SAEAASASCWVLLG
Trigger: CCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCTGATCATGCTGCAAGAGACTGTGAAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp CTGCTGCTGTTGCTGCTGCTGCTGTTGCTTCTGCTGCATGAGTTTTaGCCTCTGTTGTTGCTGGGCAGCCATCTGTTTGAGCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLLLHEF*PLLLLGSHLFELLC
Trigger: GCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAACAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTTCTGCTaGATGAGTTTTGCCCTCTGTTGTTGCTGGGCAGCCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCFC*MSFALCCCWAAICL
Trigger: CAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp TGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTTCTaGTGCATGAGTTTTGCCCTCTGTTGTTGCTGGGCAGCCATCTGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCF*CMSFALCCCWAAIC
Trigger: ACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp CTGTGGGAAGTGCTGTTTGGTCAGTCTTGGCTGACCGGCTTGCAATaGGTAGCTGGCGCCATTGTTGAATGGTCCCAACTCCCCACTAGT +
Preference number: 5 (lower is better)
Translates to: LWEVLFGQSWLTGLQ*VAGAIVEWSQLPTS
Trigger: ACTAGTGGGGAGTTGGGACCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGCACTTCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp GTGCTGCTCCTGACCGTGGGCAGGAAGCGCAGCATAGGCCATGGGTaGGTTCATCACTCCTTTCTGCTTAATGAGAAGCATGCGTTTCTG +
Preference number: 5 (lower is better)
Translates to: VLLLTVGRKRSIGHG*VHHSFLLNEKHAFL
Trigger: CAGAAACGCATGCTTCTCATTAAGCAGAAAGGAGTGATGAACCCACCCATGGCCTATGCTGCGCTTCCTGCCCACGGTCAGGAGCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACCAGTTTTGTGCTCCTaGCTGGACGGTTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQPVLCS*LDGSHD
Trigger: GTCATGGGAACCGTCCAGCAAGGAGCACAAAACTGG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGCCTCTTCACAGTCTCTaGCAGCATGATCAGCGTATG +
Preference number: 5 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLPLHSL*QHDQRM
Trigger: CATACGCTGATCATGCTGCAAGAGACTGTGAAGAGG...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAATGTTGTTGGGCAAATaGTTGATGGCTTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAMLLGK*LMASSP
Trigger: GGGGCTGGAAGCCATCAACAATTTGCCCAACAACAT...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGGTGGCGTCTCCATGGTaGTCTGTGAGAACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKVASPW*SVRTPA
Trigger: AGCAGGAGTTCTCACAGACAACCATGGAGACGCCAC...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp TGCTGCTGCTGTTGCTTCTGCTGCATGAGTTTTGCCCTCTGTTGTTaGTGGGCAGCCATCTGTTTGAGCTGCTCTGCTGGGGACATGTCA +
Preference number: 5 (lower is better)
Translates to: CCCCCFCCMSFALCC*WAAICLSCSAGDMS
Trigger: TGACATGTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp ATCATGCCCGCATTCTGTGCAATCAACCTCGATGCTCGCATGCTCTaGAGAGCCACCTGGTTTCTCACAGCTGCTATGTCCTGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: IMPAFCAINLDARML*RATWFLTAAMSWGE
Trigger: TTCACCCCAGGACATAGCAGCTGTGAGAAACCAGGTGGCTCTCCAGAGCATGCGAGCATCGAGGTTGATTGCACAGAATGCGGGCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp TGCTGCTGTTGCTTCTGCTGCATGAGTTTTGCCCTCTGTTGTTGCTaGGCAGCCATCTGTTTGAGCTGCTCTGCTGGGGACATGTCAGAG +
Preference number: 5 (lower is better)
Translates to: CCCCFCCMSFALCCC*AAICLSCSAGDMSE
Trigger: CTCTGACATGTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGGCAGCCTCCGCATCTaGCTGGGTTTTACTCGGGTG +
Preference number: 5 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILGSLRI*LGFTRV
Trigger: CACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTCAAGAGGCTCCTGTTaGAGGTCCTTGTTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLSRGSC*RSLFCK
Trigger: CTTACAGAACAAGGACCTCAAACAGGAGCCTCTTGA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGTTGGTTGTTAAAGGCTaGGGGGTACATCATTGGGCT +
Preference number: 5 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLLVVKG*GVHHWA
Trigger: AGCCCAATGATGTACCCCCAAGCCTTTAACAACCAA...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCTCCCGAAGGAACTGTaGCTTCTGGTGCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: ETVDFPRGGRDSSITFARLPKEL*LLVLHQ
Trigger: CTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTCCCCTGGGCCACTTTaGATGATGGAGTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: FFVPASESRNVSGSTHLLSPGPL*MMESTR
Trigger: CCTCGTGGACTCCATCATCAAAAGTGGCCCAGGGGA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAACAGTTCATCAAGCTCTaGCATCCATTCATCCCCTGG +
Preference number: 5 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQQFIKL*HPFIPW
Trigger: CCAGGGGATGAATGGATGCAAGAGCTTGATGAACTG...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGCAATTTTGCCCTCTGTTGTaGCTGGGCAGCCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: AQVVAGKAGSGPALMEKQFCPLL*LGSHLF
Trigger: AAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAA...TTGCTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGTTGCTGCTGCTGCTGTaGCTTCTGCTGCATGAGTTT +
Preference number: 5 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKLLLLL*LLLHEF
Trigger: AAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAA...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp GGCCTGGGTCCCTGGGATTGGTTGTGTGGGATGCCCATTCCACTCTaGTTGGAATGCTGCAACATTTGGGTCATTCCTGTGTTCATGTTG +
Preference number: 5 (lower is better)
Translates to: GLGPWDWLCGMPIPL*LECCNIWVIPVFML
Trigger: CAACATGAACACAGGAATGACCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 90 bp CATCGCTCTTCACACTCACGCTCTCCTGGGAGAGTGGCGTCTCCATaGTTGTCTGTGAGAACTCCTGCTCCTTCTTCTCTTCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: HRSSHSRSPGRVASP*LSVRTPAPSSLQSL
Trigger: AAGACTTTGAAGAGAAGAAGGAGCAGGAGTTCTCACAGACAACCATGGAGACGCCACTCTCCCAGGAGAGCGTGAGTGTGAAGAGCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTTGCTCGCAGCAAAGTaGCCACCTGCTATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FFVPASESRNVSGSTHLLLLAAK*PPAICC
Trigger: GCAGCAGATAGCAGGTGGCAACTTTGCTGCGAGCAA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGGCACTGTGTATATCCTTGAGTTTTGCCCTCTGTaGTTGCTGGGCAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: WWKRFQYHLRTPGTVYILEFCPL*LLGSHL
Trigger: CAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTC...AAGGATATACACAGTGCCTGGCGTGCGAAGGTGATACTGGAATCTCTTCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp ACATTTGGGTCATTCCTGTGTTCATGTTGTACATTCCTGGTTGGCTaGTTGGAGGGGCACTGTAAGAGGCCAGACCTATCTCTGACTGCG +
Preference number: 5 (lower is better)
Translates to: TFGSFLCSCCTFLVG*LEGHCKRPDLSLTA
Trigger: CGCAGTCAGAGATAGGTCTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGACCCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCAGCTCAGGTGGTTGCAGGAAAAGCTGGGTCAGGCCCTGCTTTGATGGAGAAGATTCCTGTGTTCATGTaGTACATTCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SAQVVAGKAGSGPALMEKIPVFM*YIPGWL
Trigger: CAGCCAACCAGGAATGTACAACATGAACACAGGAAT...CTTCTCCATCAAAGCAGGGCCTGACCCAGCTTTTCCTGCAACCACCTGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCCAGTTCATCAAGCTCTaGCATCCATTCATCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ETVDFPRGGRDSSITFARQFIKL*HPFIPW
Trigger: CCAGGGGATGAATGGATGCAAGAGCTTGATGAACTG...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TTCTTTGTTCCTGCCTCCGAATCCAGGAACGTGTCTGGAAGCACACATCTCCTTTTGTTGGGCAAATTGTaGATGGCTTCCAGCCCCGTG +
Preference number: 5 (lower is better)
Translates to: FFVPASESRNVSGSTHLLLLGKL*MASSPV
Trigger: CACGGGGCTGGAAGCCATCAACAATTTGCCCAACAA...AAGGAGATGTGTGCTTCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGCAGTTCCTCCCCATTCCGGGAGGTCACAGTCTCCTTGCCACCACCTCTTTGAACTTGAAGTCTGATTaGAGTGCTGCTGTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: WQFLPIPGGHSLLATTSLNLKSD*SAAVVV
Trigger: AACAACAACAGCAGCACTCAAATCAGACTTCAAGTT...CAAAGAGGTGGTGGCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp ATGCTGCAACATTTGGGTCATTCCTGTGTTCATGTTGTACATTCCTaGTTGGCTGGTTGGAGGGGCACTGTAAGAGGCCAGACCTATCTC +
Preference number: 5 (lower is better)
Translates to: MLQHLGHSCVHVVHS*LAGWRGTVRGQTYL
Trigger: GAGATAGGTCTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGACCCAAATGTTGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATTTCGGATGCGCTTGCTaGTGGGAGAGAAGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHFGCAC*WERSSR
Trigger: ACGGGAGCTTCTCTCCCACAAGCAAGCGCATCCGAA...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TGGGGGATATGGAGGACAAACCAAGGGTTACCCTCTCTCCCCCTCTCCCTGGCAGTTTGTTTAAGGAGTTaGTACCCAAGTTATTTGGCT +
Preference number: 5 (lower is better)
Translates to: WGIWRTNQGLPSLPLSLAVCLRS*YPSYLA
Trigger: AGCCAAATAACTTGGGTACAAACTCCTTAAACAAAC...TGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 90 bp TGCCACTCTTGGTCATTCAGGTTAATGTCAGAGAACAGCTTGTTCTaGTTAGAAAGGGACGTCTCCGATGTGTCTATGCAGGCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: CHSWSFRLMSENSLF*LERDVSDVSMQAGS
Trigger: CGACCCTGCCTGCATAGACACATCGGAGACGTCCCTTTCTAATCAGAACAAGCTGTTCTCTGACATTAACCTGAATGACCAAGAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 90 bp TGGGTCCCTGGGATTGGTTGTGTGGGATGCCCATTCCACTCTGATTaGAATGCTGCAACATTTGGGTCATTCCTGTGTTCATGTTGTACA +
Preference number: 5 (lower is better)
Translates to: WVPGIGCVGCPFHSD*NAATFGSFLCSCCT
Trigger: TGTACAACATGAACACAGGAATGACCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGTTGTACATTCCTGGTaGGCTGGTTGGAGGGGCACT +
Preference number: 5 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHVVHSW*AGWRGT
Trigger: AGTGCCCCTCCAACCAGCCAACCAGGAATGTACAAC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCGGAATGCTGCAACATTaGGGTCATTCCTGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: ETVDFPRGGRDSSITFARGMLQH*GHSCVH
Trigger: ATGAACACAGGAATGACCCAAATGTTGCAGCATTCC...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTTACCTGTTCTCGCAGTaGACGTGGTGCCGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVYLFSQ*TWCRRQ
Trigger: CTGCCGGCGGCACCACGTCAACTGCGAGAACAGGTA...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GAGACAGTTGACTTTCCACGTGGTGGAAGAGATTCCAGTATCACCTTCGCACGCAGGCACTATAGTGTTTaGGTTGTTAAAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: ETVDFPRGGRDSSITFARRHYSV*VVKGLG
Trigger: CCCCAAGCCTTTAACAACCAAAACACTATAGTGCCT...GCGTGCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp AGGGAGGTAGTTGTTCATGGTCGTCTTCTGCAGGCTGTTTGCCATTaGAGGCACTATAGTGTTTTGGTTGTTAAAGGCTTGGGGGTACAT +
Preference number: 5 (lower is better)
Translates to: REVVVHGRLLQAVCH*RHYSVLVVKGLGVH
Trigger: ATGTACCCCCAAGCCTTTAACAACCAAAACACTATAGTGCCTGCAATGGCAAACAGCCTGCAGAAGACGACCATGAACAACTACCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp ATTGGAAGGGAGGTAGTTGTTCATGGTCGTCTTCTGCAGGCTGTTTaGCATTGCAGGCACTATAGTGTTTTGGTTGTTAAAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: IGREVVVHGRLLQAV*HCRHYSVLVVKGLG
Trigger: CCCCAAGCCTTTAACAACCAAAACACTATAGTGCCTGCAATGGCAAACAGCCTGCAGAAGACGACCATGAACAACTACCTCCCTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGTGGGCAGCCATCTGTTaGAGCTGCTCTGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMWAAIC*SCSAGD
Trigger: GTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCCA...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 90 bp ATGTCGTCTTCCGGAACCGTGTTGGCCAGTTCGTCTATTAGTTCTTaGCACTCTTGGTCATTCAGGTTAATGTCAGAGAACAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: MSSSGTVLASSSISS*HSWSFRLMSENSLF
Trigger: GAACAAGCTGTTCTCTGACATTAACCTGAATGACCAAGAGTGGCAAGAACTAATAGACGAACTGGCCAACACGGTTCCGGAAGACGACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTTTCCTGGTTGGCTGGTaGGAGGGGCACTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVFLVGW*EGHCKR
Trigger: CCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAA...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAGCTGTTTGGTCAGTCTaGGCTGACCGGCTTGCAATG +
Preference number: 5 (lower is better)
Translates to: GLASSFTVKFILSLGLCIAVWSV*ADRLAM
Trigger: CATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGC...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATATCCTTTCGGATGCGCTaGCTTGTGGGAGAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GLASSFTVKFILSLGLCISFRMR*LVGEKL
Trigger: GAGCTTCTCTCCCACAAGCAAGCGCATCCGAAAGGA...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTACTTCTCTCTCTCATTCTCCCTCGGACCAAAACGGACTCATGTTTACCATGACGTCAGGGGCATGTaGTTGGGCAAATTGTTGATG +
Preference number: 5 (lower is better)
Translates to: SYFSLSFSLGPKRTHVYHDVRGM*LGKLLM
Trigger: CATCAACAATTTGCCCAACAACATGCCCCTGACGTC...ATGGTAAACATGAGTCCGTTTTGGTCCGAGGGAGAATGAGAGAGAGAAGTAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATACTGTTCCATATGGACTaGACGGAGGCCCTAAGGGAG +
Preference number: 5 (lower is better)
Translates to: GLASSFTVKFILSLGLCILFHMD*TEALRE
Trigger: CTCCCTTAGGGCCTCCGTCAAGTCCATATGGAACAG...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCTCCCGAAGGAACTGTaGCTTCTGGTGCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMLPKEL*LLVLHQ
Trigger: CTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCCAGTTTTGTGCTCCTaGCTGGACGGTTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMPVLCS*LDGSHD
Trigger: GTCATGGGAACCGTCCAGCAAGGAGCACAAAACTGG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGGTCAGGGGCATGTTGTaGGGCAAATTGTTGATGGCT +
Preference number: 5 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMVRGML*GKLLMA
Trigger: AGCCATCAACAATTTGCCCAACAACATGCCCCTGAC...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTATTCCTGTGTTCATGTaGTACATTCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVIPVFM*YIPGWL
Trigger: CAGCCAACCAGGAATGTACAACATGAACACAGGAAT...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp AGTTCAGCTTTTCCATCTCTCACATTTGATATTTGTCTTCCTGATGCTGGAGTTTCTTCAAAGTCTTCATaGAACAGGTCCTGGATGTCG +
Preference number: 5 (lower is better)
Translates to: SSAFPSLTFDICLPDAGVSSKSS*NRSWMS
Trigger: CGACATCCAGGACCTGTTCAATGAAGACTTTGAAGA...AACTCCAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGCTAAGGGAGACCAACTaGAAGTCTGATTTGAGTGCT +
Preference number: 5 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMLRETN*KSDLSA
Trigger: AGCACTCAAATCAGACTTCAAGTTGGTCTCCCTTAG...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp GGGCTAGCCTCTTCTTTCACGGTCAAATTCATTCTTTCTCTTGGCTTATGTATAACTATAGTGTTTTGGTaGTTAAAGGCTTGGGGGTAC +
Preference number: 5 (lower is better)
Translates to: GLASSFTVKFILSLGLCITIVFW*LKAWGY
Trigger: GTACCCCCAAGCCTTTAACAACCAAAACACTATAGT...TATACATAAGCCAAGAGAAAGAATGAATTTGACCGTGAAAGAAGAGGCTAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS-3UTR CAA 90 bp TCATATAAAGGTCAAAGGACAACTTCTTCAAGTAAGTTCTCTCCTTCCACCATGAGAATATTGTGCTGTTaGTTTAAGGAGTTTGTACCC +
Preference number: 5 (lower is better)
Translates to: SYKGQRTTSSSKFSPSTMRILCC*FKEFVP
Trigger: GGGTACAAACTCCTTAAACAAACAGCACAATATTCT...CATGGTGGAAGGAGAGAACTTACTTGAAGAAGTTGTCCTTTGACCTTTATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TGCGCTGGCGGAGCCGCTCGACTACCGTGCTGTGCTTaGGGACGGCCGCCGAGCTGCCGCCGGGGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: CAGGAARLPCCA*GRPPSCRRGPR
Trigger: CCGGGGGCCCCGGCGGCAGCTCGGCGGCCGTCCCCAAGCACAGCACGGTAGTCGAGCGGCTCCGCCAGCGCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp TCGATGCGCTGGCGGAGCCGCTCGACTACCGTGCTGTaGTTGGGGACGGCCGCCGAGCTGCCGCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SMRWRSRSTTVL*LGTAAELPPGP
Trigger: GGGCCCCGGCGGCAGCTCGGCGGCCGTCCCCAAGCACAGCACGGTAGTCGAGCGGCTCCGCCAGCGCATCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp AGCCCTCGATGCGCTGGCGGAGCCGCTCGACTACCGTaGTGTGCTTGGGGACGGCCGCCGAGCTGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: SPRCAGGAARLP*CAWGRPPSCRR
Trigger: CCGGCGGCAGCTCGGCGGCCGTCCCCAAGCACAGCACGGTAGTCGAGCGGCTCCGCCAGCGCATCGAGGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp GGGCCCCCGGAGCCGCCGCAGCCGCCGGCAGCGGGGTaGTTGCCACTCGGAGCAACCGGAGTGCTATTGGGA +
Preference number: 6 (lower is better)
Translates to: GPPEPPQPPAAG*LPLGATGVLLG
Trigger: TCCCAATAGCACTCCGGTTGCTCCGAGTGGCAATCACCCCGCTGCCGGCGGCTGCGGCGGCTCCGGGGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp CAGTTGACGTGGTGCCGCCGGCAGCCCTCGATGCGCTaGCGGAGCCGCTCGACTACCGTGCTGTGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: QLTWCRRQPSMR*RSRSTTVLCLG
Trigger: CCCCAAGCACAGCACGGTAGTCGAGCGGCTCCGCCAGCGCATCGAGGGCTGCCGGCGGCACCACGTCAACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp CCCCGGAGCCGCCGCAGCCGCCGGCAGCGGGGTGATTaGCACTCGGAGCAACCGGAGTGCTATTGGGAGTAT +
Preference number: 6 (lower is better)
Translates to: PRSRRSRRQRGD*HSEQPECYWEY
Trigger: ATACTCCCAATAGCACTCCGGTTGCTCCGAGTGGCAATCACCCCGCTGCCGGCGGCTGCGGCGGCTCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp TTCACGCCGATCCCGGCCCCGCCGAGGCTGCTGCTCAGGCTGCTGTaGATGCAGATACTACTACCATTCGCGGCGGCAGCGGGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: FTPIPAPPRLLLRLL*MQILLPFAAAAGAA
Trigger: CGCAGCCCCCGCTGCCGCCGCGAATGGTAGTAGTATCTGCATCAACAGCAGCCTGAGCAGCAGCCTCGGCGGGGCCGGGATCGGCGTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp GTGGCTGGCTGCCTAGAAATCCAAGGCCCCCAGGACTaGCTCCGGAGACCATGCTGCCCGACCCCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: VAGCLEIQGPQD*LRRPCCPTPRA
Trigger: TGCCCTCGGGGTCGGGCAGCATGGTCTCCGGAGCCAGTCCTGGGGGCCTTGGATTTCTAGGCAGCCAGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS TCA 72 bp GCTCCACCTGAGCCTGCTGATACCTGTTCTCGCAGTTaGCGTGGTGCCGCCGGCAGCCCTCGATGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: APPEPADTCSRS*RGAAGSPRCAG
Trigger: GCCAGCGCATCGAGGGCTGCCGGCGGCACCACGTCAACTGCGAGAACAGGTATCAGCAGGCTCAGGTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp CGGCAGCGGGGTGATTGCCACTCGGAGCAACCGGAGTaGTATTGGGAGTATTCACGCCGATCCCGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: RQRGDCHSEQPE*YWEYSRRSRPR
Trigger: GCGGGGCCGGGATCGGCGTGAATACTCCCAATAGCACTCCGGTTGCTCCGAGTGGCAATCACCCCGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TCACCATGCCGACCCCCTGGCTGGAGGCTGGCGGCCTaGGTCCCTGGGATTGGTTGTGTGGGATGCCCATTC +
Preference number: 6 (lower is better)
Translates to: SPCRPPGWRLAA*VPGIGCVGCPF
Trigger: GAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCAGCCAGGGGGTCGGCATGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp CGGGGTGATTGCCACTCGGAGCAACCGGAGTGCTATTaGGAGTATTCACGCCGATCCCGGCCCCGCCGAGGC +
Preference number: 6 (lower is better)
Translates to: RGDCHSEQPECY*EYSRRSRPRRG
Trigger: GCCTCGGCGGGGCCGGGATCGGCGTGAATACTCCCAATAGCACTCCGGTTGCTCCGAGTGGCAATCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp TGCTGCTGCGAGAGAGCCGAGTTCACCAGCATGCTCTaGCCGAAGCCGCTCACCATGCCGACCCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CCCERAEFTSML*PKPLTMPTPWL
Trigger: CAGCCAGGGGGTCGGCATGGTGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGGCTCTCTCGCAGCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp GAGACCATGCTGCCCGACCCCGAGGGCACAGAGTTCTaGATAGGGCCTGTGGTCCGGGGAATACCGACTGCG +
Preference number: 6 (lower is better)
Translates to: ETMLPDPEGTEF*IGPVVRGIPTA
Trigger: CGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAACTCTGTGCCCTCGGGGTCGGGCAGCATGGTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp GCTGGTGCTGCTGCGAGAGAGCCGAGTTCACCAGCATaGTCTGACCGAAGCCGCTCACCATGCCGACCCCCT +
Preference number: 6 (lower is better)
Translates to: AGAAAREPSSPA*SDRSRSPCRPP
Trigger: AGGGGGTCGGCATGGTGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGGCTCTCTCGCAGCAGCACCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp GTTCTGCATAGGGCCTGTGGTCCGGGGAATACCGACTaGGTGCTGCTCCTGACCGTGGGCAGGAAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: VLHRACGPGNTD*VLLLTVGRKRS
Trigger: GCTGCGCTTCCTGCCCACGGTCAGGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp GAGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTGCTaGCCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGCTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: EAASASCWVLLGCCC*PLPAPDFLALCSRV
Trigger: GACCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp CTGGCATGCCAGGGACACCCTGGCTCAGACCAGGCATaGCCAATGGCCTCACCTGGCTGGCACTCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: LACQGHPGSDQA*PMASPGWHSAV
Trigger: GACAGCAGAGTGCCAGCCAGGTGAGGCCATTGGTCATGCCTGGTCTGAGCCAGGGTGTCCCTGGCATGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp GCTCATAGGCCTGGCCCTGGTTGCTCGCAGCAAAGTTaGCACCTGCTATCTGCTGCTGTGCTGGGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: AHRPGPGCSQQS*HLLSAAVLGAG
Trigger: GCCAGCCCCCAGCACAGCAGCAGATAGCAGGTGGCAACTTTGCTGCGAGCAACCAGGGCCAGGCCTATGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp CTTGCTGGGTTTTACTCGGGTGCTGCTGCTTGCCGCTaGCGGCGCCCGATTTCTTGGCTCTCTGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LAGFYSGAAACR*RRPISWLSAPG
Trigger: CCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp GCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTaGTTGCCGCTGCCGGCGCCCGATTTCTTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: ASASCWVLLGCC*LPLPAPDFLAL
Trigger: GAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp GCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTGCTaGTGCTTGCCGCTGCCGGCGCCCGATTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: AASASCWVLLGC*CLPLPAPDFLA
Trigger: AGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp GAGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGGGTaGTGCTGCTTGCCGCTGCCGGCGCCCGATTTCTTG +
Preference number: 6 (lower is better)
Translates to: EAASASCWVLLG*CCLPLPAPDFL
Trigger: CAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp GGTGCTGCTGCTTGCCGCTGCCGGCGCCCGATTTCTTaGCTCTCTGCTCCAGGGTCCTCTGATAGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: GAAACRCRRPIS*LSAPGSSDRGS
Trigger: TGAGCCTCTATCAGAGGACCCTGGAGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TTCCTCTGCTCGGCTGAGGCAGCCTCCGCATCTTGCTaGGTTTTACTCGGGTGCTGCTGCTTGCCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: FLCSAEAASASC*VLLGCCCLPLP
Trigger: CGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp CCTGAGCAGGGGTCCGCTCATAGGCCTGGCCCTGGTTaGTCGCAGCAAAGTTGCCACCTGCTATCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PEQGSAHRPGPG*SQQSCHLLSAA
Trigger: AGCAGCAGATAGCAGGTGGCAACTTTGCTGCGAGCAACCAGGGCCAGGCCTATGAGCGGACCCCTGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp CCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTGCTTaGCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PHLAGFYSGAAA*RCRRPISWLSA
Trigger: AGCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp TGGTTCCTCTGCTCGGCTGAGGCAGCCTCCGCATCTTaGTGGGTTTTACTCGGGTGCTGCTGCTTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: WFLCSAEAASAS*WVLLGCCCLPL
Trigger: CAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp GACTGCGCTGCTGCCGTAGCCATCGTCCCTGGGTTCTaGGAGGGTCCCATTCCCATCATGCCCGCATTCTGT +
Preference number: 6 (lower is better)
Translates to: DCAAAVAIVPGF*EGPIPIMPAFC
Trigger: ACAGAATGCGGGCATGATGGGAATGGGACCCTCCCAGAACCCAGGGACGATGGCTACGGCAGCAGCGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp TCCGCATCTTGCTGGGTTTTACTCGGGTGCTGCTGCTaGCCGCTGCCGGCGCCCGATTTCTTGGCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SASCWVLLGCCC*PLPAPDFLALC
Trigger: GCAGAGAGCCAAGAAATCGGGCGCCGGCAGCGGCAAGCAGCAGCACCCGAGTAAAACCCAGCAAGATGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp GCTTCCAGCCCCGTGCCAAGATCCTTTCGGATGCGCTaGCTTGTGGGAGAGAAGCTCCCGTCGCAAGCGCCA +
Preference number: 6 (lower is better)
Translates to: ASSPVPRSFRMR*LVGEKLPSQAP
Trigger: TGGCGCTTGCGACGGGAGCTTCTCTCCCACAAGCAAGCGCATCCGAAAGGATCTTGGCACGGGGCTGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp TTTTGTGCTCCTTGCTGGACGGTTCCCATGACACTCTaGAGCCTTGGAGGGCCCTGGGGCCTAGGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: FCAPCWTVPMTL*SLGGPWGLGKA
Trigger: GGCCTTGCCTAGGCCCCAGGGCCCTCCAAGGCTTCAGAGTGTCATGGGAACCGTCCAGCAAGGAGCACAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGTTGCTGCTGCTGCCTCTGCTCCCGAAGGAACTGTTaGTTCTGGTGCTCCATCAGCTGGGCCCGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: CCCCCLCSRRNC*FWCSISWARWS
Trigger: GGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp ACCGGCTTGCAATGGGTAGCTGGCGCCATTGTTGAATaGTCCCAACTCCCCACTAGTCCTCCCAGGCACCCC +
Preference number: 6 (lower is better)
Translates to: TGLQWVAGAIVE*SQLPTSPPRHP
Trigger: GGGGTGCCTGGGAGGACTAGTGGGGAGTTGGGACCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp CTGTTGCTGCTGCTGCCTCTGCTCCCGAAGGAACTGTaGCTTCTGGTGCTCCATCAGCTGGGCCCGTTGGTC +
Preference number: 6 (lower is better)
Translates to: LLLLLPLLPKEL*LLVLHQLGPLV
Trigger: GACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp CCAGCCCCGTGCCAAGATCCTTTCGGATGCGCTTGCTaGTGGGAGAGAAGCTCCCGTCGCAAGCGCCATTCT +
Preference number: 6 (lower is better)
Translates to: PAPCQDPFGCAC*WERSSRRKRHS
Trigger: AGAATGGCGCTTGCGACGGGAGCTTCTCTCCCACAAGCAAGCGCATCCGAAAGGATCTTGGCACGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp GATCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGTaGCTGCTGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: DLLLLLLLLLLLLLL*LLLPLLPKELLLLV
Trigger: CACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS TCA 72 bp GAAGGCAGCCCCGACACCTTCGCCGCTATAACTGTATaGCATGTCCTGAGCAGGGGTCCGCTCATAGGCCTG +
Preference number: 6 (lower is better)
Translates to: EGSPDTFAAITV*HVLSRGPLIGL
Trigger: CAGGCCTATGAGCGGACCCCTGCTCAGGACATGTCATACAGTTATAGCGGCGAAGGTGTCGGGGCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*LCSRRNCCFWC
Trigger: GCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCLCSRRNCCF
Trigger: GAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp CTGACGTCCCATAGCTGCTGGGTTGAGGGTTCTCACTaGGCCAGTGTTAGCATCCATGACGGGCTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LTSHSCWVEGSH*ASVSIHDGLAQ
Trigger: CTGAGCCAGCCCGTCATGGATGCTAACACTGGCGCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp TGCTGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTCTaGTGCTCCATCAGCTGGGCCCGTTGGTCCATTAGC +
Preference number: 6 (lower is better)
Translates to: CCCLCSRRNCCF*CSISWARWSIS
Trigger: GCTAATGGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp GGAGGCTGGCGGCCTGGGTCCCTGGGATTGGTTGTGTaGGATGCCCATTCCACTCTGATTGGAATGCTGCAA +
Preference number: 6 (lower is better)
Translates to: GGWRPGSLGLVV*DAHSTLIGMLQ
Trigger: TTGCAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp AGTGTTAGCATCCATGACGGGCTGGCTCAGCCCCTGTaGGAAGTGCTGTTTGGTCAGTCTTGGCTGACCGGC +
Preference number: 6 (lower is better)
Translates to: SVSIHDGLAQPL*EVLFGQSWLTG
Trigger: GCCGGTCAGCCAAGACTGACCAAACAGCACTTCCCACAGGGGCTGAGCCAGCCCGTCATGGATGCTAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 90 bp CAGCCCCTGTGGGAAGTGCTGTTTGGTCAGTCTTGGCTGACCGGCTaGCAATGGGTAGCTGGCGCCATTGTTGAATGGTCCCAACTCCCC +
Preference number: 6 (lower is better)
Translates to: QPLWEVLFGQSWLTG*QWVAGAIVEWSQLP
Trigger: GGGGAGTTGGGACCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGCACTTCCCACAGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 90 bp TTGTTGATGGCTTCCAGCCCCGTGCCAAGATCCTTTCGGATGCGCTaGCTTGTGGGAGAGAAGCTCCCGTCGCAAGCGCCATTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLMASSPVPRSFRMR*LVGEKLPSQAPFCW
Trigger: CCAGCAGAATGGCGCTTGCGACGGGAGCTTCTCTCCCACAAGCAAGCGCATCCGAAAGGATCTTGGCACGGGGCTGGAAGCCATCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp CTGGCACTCTGCTGTCCTGCCAGGGTTGGCATCATCTaGCGTCCCATAGCTGCTGGGTTGAGGGTTCTCACT +
Preference number: 6 (lower is better)
Translates to: LALCCPARVGII*RPIAAGLRVLT
Trigger: AGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCAGGACAGCAGAGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGCTCCATCAGCTGGGCCCGTTGGTCCATTAGCATCTaGTTCATGATGGCTGCCTGTGGCTGGCTGCCTAGA +
Preference number: 6 (lower is better)
Translates to: CSISWARWSISI*FMMAACGWLPR
Trigger: TCTAGGCAGCCAGCCACAGGCAGCCATCATGAAGCAGATGCTAATGGACCAACGGGCCCAGCTGATGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGCTGCCTCTGCTCCCGAAGGAACTGTTGCTTCTGGTaGTCCATCAGCTGGGCCCGTTGGTCCATTAGCATC +
Preference number: 6 (lower is better)
Translates to: CCLCSRRNCCFW*SISWARWSISI
Trigger: GATGCTAATGGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCCTCTaGTCCCGAAGGAACTGTTGCTTCTGGTGCTCCATC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCL*SRRNCCFWCSI
Trigger: GATGGAGCACCAGAAGCAACAGTTCCTTCGGGAGCAGAGGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp CTGGGAGGGTCCCATTCCCATCATGCCCGCATTCTGTaGAATCAACCTCGATGCTCGCATGCTCTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: LGGSHSHHARIL*NQPRCSHALES
Trigger: GCTCTCCAGAGCATGCGAGCATCGAGGTTGATTGCACAGAATGCGGGCATGATGGGAATGGGACCCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TCGTCCCTGGGTTCTGGGAGGGTCCCATTCCCATCATaGCCGCATTCTGTGCAATCAACCTCGATGCTCGCA +
Preference number: 6 (lower is better)
Translates to: SSLGSGRVPFPS*PHSVQSTSMLA
Trigger: TGCGAGCATCGAGGTTGATTGCACAGAATGCGGGCATGATGGGAATGGGACCCTCCCAGAACCCAGGGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TCCTGCCAGGGTTGGCATCATCTGACGTCCCATAGCTaGTGGGTTGAGGGTTCTCACTGCGCCAGTGTTAGC +
Preference number: 6 (lower is better)
Translates to: SCQGWHHLTSHS*WVEGSHCASVS
Trigger: GCTAACACTGGCGCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS TCA 72 bp TTGCAGCATGATCAGCGTATGGTTCCTCTGCTCGGCTaGGGCAGCCTCCGCATCTTGCTGGGTTTTACTCGG +
Preference number: 6 (lower is better)
Translates to: LQHDQRMVPLLG*GSLRILLGFTR
Trigger: CCGAGTAAAACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCTGATCATGCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp TGCATAGGGCCTGTGGTCCGGGGAATACCGACTGCGTaGTGCTCCACAAAGGCAGGGTCTTTACTTCTCACT +
Preference number: 6 (lower is better)
Translates to: CIGPVVRGIPTA*CSTKAGSLLLT
Trigger: AGTGAGAAGTAAAGACCCTGCCTTTGTGGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS GCA 72 bp GTTCTGCATAGGGCCTGTGGTCCGGGGAATACCGACTaGGTGCTGCTCCACAAAGGCAGGGTCTTTACTTCT +
Preference number: 6 (lower is better)
Translates to: VLHRACGPGNTD*VLLHKGRVFTS
Trigger: AGAAGTAAAGACCCTGCCTTTGTGGAGCAGCACGCAGTCGGTATTCCCCGGACCACAGGCCCTATGCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118075.7
CDS GCA 72 bp ACAGTCTCTTGCAGCATGATCAGCGTATGGTTCCTCTaGTCGGCTGAGGCAGCCTCCGCATCTTGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: TVSCSMISVWFL*SAEAASASCWV
Trigger: AACCCAGCAAGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCTGATCATGCTGCAAGAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TCCATTAGCATCTGCTTCATGATGGCTGCCTGTGGCTaGCTGCCTAGAAATCCAAGGCCCCCAGGACTGGCT +
Preference number: 6 (lower is better)
Translates to: SISICFMMAACG*LPRNPRPPGLA
Trigger: AGCCAGTCCTGGGGGCCTTGGATTTCTAGGCAGCCAGCCACAGGCAGCCATCATGAAGCAGATGCTAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp TGCCAGGGTTGGCATCATCTGACGTCCCATAGCTGCTaGGTTGAGGGTTCTCACTGCGCCAGTGTTAGCATC +
Preference number: 6 (lower is better)
Translates to: CQGWHHLTSHSC*VEGSHCASVSI
Trigger: GATGCTAACACTGGCGCAGTGAGAACCCTCAACCCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 90 bp CTGCTGCTGCTGTTGCTTCTGCTGCATGAGTTTTGCCCTCTGTTGTaGCTGGGCAGCCATCTGTTTGAGCTGCTCTGCTGGGGACATGTC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLHEFCPLL*LGSHLFELLCWGHV
Trigger: GACATGTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp CAGCTGCTATGTCCTGGGGTGAACCTTGAAACTGGTTaGCCTGCTGCACTGGGTATGGGTTCCGCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: QLLCPGVNLETG*PAALGMGSAVA
Trigger: AGCAACAGCGGAACCCATACCCAGTGCAGCAGGTCAACCAGTTTCAAGGTTCACCCCAGGACATAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGCCCGCATTCTGTGCAATCAACCTCGATGCTCGCATaGTCTGGAGAGCCACCTGGTTTCTCACAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: CPHSVQSTSMLA*SGEPPGFSQLL
Trigger: TAGCAGCTGTGAGAAACCAGGTGGCTCTCCAGAGCATGCGAGCATCGAGGTTGATTGCACAGAATGCGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTTCTaGTGCATGAGTTTTGCCCTCTGTTGTTGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCF*CMSFALCCCWA
Trigger: TGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTaGTTCTGCTGCATGAGTTTTGCCCTCTGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*FCCMSFALCCC
Trigger: GCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp GTGCTGTTTGGTCAGTCTTGGCTGACCGGCTTGCAATaGGTAGCTGGCGCCATTGTTGAATGGTCCCAACTC +
Preference number: 6 (lower is better)
Translates to: VLFGQSWLTGLQ*VAGAIVEWSQL
Trigger: GAGTTGGGACCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp TTCCTCTTCACAGTCTCTTGCAGCATGATCAGCGTATaGTTCCTCTGCTCGGCTGAGGCAGCCTCCGCATCT +
Preference number: 6 (lower is better)
Translates to: FLFTVSCSMISV*FLCSAEAASAS
Trigger: AGATGCGGAGGCTGCCTCAGCCGAGCAGAGGAACCATACGCTGATCATGCTGCAAGAGACTGTGAAGAGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TGCTTCTGCTGCATGAGTTTTGCCCTCTGTTGTTGCTaGGCAGCCATCTGTTTGAGCTGCTCTGCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: CFCCMSFALCCC*AAICLSCSAGD
Trigger: GTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp TGGGAAGTGCTGTTTGGTCAGTCTTGGCTGACCGGCTaGCAATGGGTAGCTGGCGCCATTGTTGAATGGTCC +
Preference number: 6 (lower is better)
Translates to: WEVLFGQSWLTG*QWVAGAIVEWS
Trigger: GGACCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAGCCAAGACTGACCAAACAGCACTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp GATGCTGACGTCAGGGGCATGTTGTTGGGCAAATTGTaGATGGCTTCCAGCCCCGTGCCAAGATCCTTTCGG +
Preference number: 6 (lower is better)
Translates to: DADVRGMLLGKL*MASSPVPRSFR
Trigger: CCGAAAGGATCTTGGCACGGGGCTGGAAGCCATCAACAATTTGCCCAACAACATGCCCCTGACGTCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp TTGCTGCTGCTGCTGTTGCTTCTGCTGCATGAGTTTTGCCCTCTGTaGTTGCTGGGCAGCCATCTGTTTGAGCTGCTCTGCTGGGGACAT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLHEFCPL*LLGSHLFELLCWGH
Trigger: ATGTCCCCAGCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp ATGCTGACGTCAGGGGCATGTTGTTGGGCAAATTGTTaGTGGCTTCCAGCCCCGTGCCAAGATCCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: MLTSGACCWANC*WLPAPCQDPFG
Trigger: TCCGAAAGGATCTTGGCACGGGGCTGGAAGCCATCAACAATTTGCCCAACAACATGCCCCTGACGTCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp AACTGTTGCTTCTGGTGCTCCATCAGCTGGGCCCGTTaGTCCATTAGCATCTGCTTCATGATGGCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: NCCFWCSISWAR*SISICFMMAAC
Trigger: ACAGGCAGCCATCATGAAGCAGATGCTAATGGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp TCCCGAAGGAACTGTTGCTTCTGGTGCTCCATCAGCTaGGCCCGTTGGTCCATTAGCATCTGCTTCATGATG +
Preference number: 6 (lower is better)
Translates to: SRRNCCFWCSIS*ARWSISICFMM
Trigger: CATCATGAAGCAGATGCTAATGGACCAACGGGCCCAGCTGATGGAGCACCAGAAGCAACAGTTCCTTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp GCATTCTGTGCAATCAACCTCGATGCTCGCATGCTCTaGAGAGCCACCTGGTTTCTCACAGCTGCTATGTCC +
Preference number: 6 (lower is better)
Translates to: AFCAINLDARML*RATWFLTAAMS
Trigger: GGACATAGCAGCTGTGAGAAACCAGGTGGCTCTCCAGAGCATGCGAGCATCGAGGTTGATTGCACAGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp TCACACTCACGCTCTCCTGGGAGAGTGGCGTCTCCATaGTTGTCTGTGAGAACTCCTGCTCCTTCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SHSRSPGRVASP*LSVRTPAPSSL
Trigger: AAGAGAAGAAGGAGCAGGAGTTCTCACAGACAACCATGGAGACGCCACTCTCCCAGGAGAGCGTGAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp CTGACCGTGGGCAGGAAGCGCAGCATAGGCCATGGGTaGGTTCATCACTCCTTTCTGCTTAATGAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: LTVGRKRSIGHG*VHHSFLLNEKH
Trigger: ATGCTTCTCATTAAGCAGAAAGGAGTGATGAACCCACCCATGGCCTATGCTGCGCTTCCTGCCCACGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp GGAGATGCTGACGTCAGGGGCATGTTGTTGGGCAAATaGTTGATGGCTTCCAGCCCCGTGCCAAGATCCTTT +
Preference number: 6 (lower is better)
Translates to: GDADVRGMLLGK*LMASSPVPRSF
Trigger: AAAGGATCTTGGCACGGGGCTGGAAGCCATCAACAATTTGCCCAACAACATGCCCCTGACGTCAGCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp CTGTTGCTTCTGCTGCATGAGTTTTGCCCTCTGTTGTaGCTGGGCAGCCATCTGTTTGAGCTGCTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLLLLHEFCPLL*LGSHLFELLCW
Trigger: CCAGCAGAGCAGCTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp AACAGTTCATCAAGCTCTTGCATCCATTCATCCCCTGGGCCACTTTaGATGATGGAGTCCACGAGGTCTGTACTGTCTGGGAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: NSSSSSCIHSSPGPL*MMESTRSVLSGRPG
Trigger: CCCTGGCCTCCCAGACAGTACAGACCTCGTGGACTCCATCATCAAAAGTGGCCCAGGGGATGAATGGATGCAAGAGCTTGATGAACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS GCA 72 bp TTGCTGCTGCTGCTGTTGCTTCTGCTGCATGAGTTTTaGCCTCTGTTGTTGCTGGGCAGCCATCTGTTTGAG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLHEF*PLLLLGSHLFE
Trigger: CTCAAACAGATGGCTGCCCAGCAACAACAGAGGGCAAAACTCATGCAGCAGAAGCAACAGCAGCAGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp TTGGGTCATTCCTGTGTTCATGTTGTACATTCCTGGTaGGCTGGTTGGAGGGGCACTGTAAGAGGCCAGACC +
Preference number: 6 (lower is better)
Translates to: LGHSCVHVVHSW*AGWRGTVRGQT
Trigger: GGTCTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp TCAAGCTCTTGCATCCATTCATCCCCTGGGCCACTTTaGATGATGGAGTCCACGAGGTCTGTACTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: SSSCIHSSPGPL*MMESTRSVLSG
Trigger: CCCAGACAGTACAGACCTCGTGGACTCCATCATCAAAAGTGGCCCAGGGGATGAATGGATGCAAGAGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 90 bp TTTGGGTCATTCCTGTGTTCATGTTGTACATTCCTGGTTGGCTGGTaGGAGGGGCACTGTAAGAGGCCAGACCTATCTCTGACTGCGCTG +
Preference number: 6 (lower is better)
Translates to: FGSFLCSCCTFLVGW*EGHCKRPDLSLTAL
Trigger: CAGCGCAGTCAGAGATAGGTCTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGACCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 90 bp GTGTCTATGCAGGCAGGGTCGTCAAGAGGCTCCTGTTTGAGGTCCTaGTTCTGTAAGATAGCAAAGCTATCCTCCAGATCCCCACAGCCA +
Preference number: 6 (lower is better)
Translates to: VSMQAGSSRGSCLRS*FCKIAKLSSRSPQP
Trigger: TGGCTGTGGGGATCTGGAGGATAGCTTTGCTATCTTACAGAACAAGGACCTCAAACAGGAGCCTCTTGACGACCCTGCCTGCATAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp CGCTCTTCACACTCACGCTCTCCTGGGAGAGTGGCGTCTCCATGGTaGTCTGTGAGAACTCCTGCTCCTTCTTCTCTTCAAAGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: RSSHSRSPGRVASPW*SVRTPAPSSLQSLH
Trigger: ATGAAGACTTTGAAGAGAAGAAGGAGCAGGAGTTCTCACAGACAACCATGGAGACGCCACTCTCCCAGGAGAGCGTGAGTGTGAAGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp GTCTCCGATGTGTCTATGCAGGCAGGGTCGTCAAGAGGCTCCTGTTaGAGGTCCTTGTTCTGTAAGATAGCAAAGCTATCCTCCAGATCC +
Preference number: 6 (lower is better)
Translates to: VSDVSMQAGSSRGSC*RSLFCKIAKLSSRS
Trigger: GGATCTGGAGGATAGCTTTGCTATCTTACAGAACAAGGACCTCAAACAGGAGCCTCTTGACGACCCTGCCTGCATAGACACATCGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp ATGGACTTGACGGAGGCCCTAAGGGAGACCAACTTGAAGTCTGATTaGAGTGCTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: MDLTEALRETNLKSD*SAAVVVVVAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCACTCAAATCAGACTTCAAGTTGGTCTCCCTTAGGGCCTCCGTCAAGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp CCCTGGGATTGGTTGTGTGGGATGCCCATTCCACTCTaGTTGGAATGCTGCAACATTTGGGTCATTCCTGTG +
Preference number: 6 (lower is better)
Translates to: PWDWLCGMPIPL*LECCNIWVIPV
Trigger: CACAGGAATGACCCAAATGTTGCAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CCA 72 bp CATTTGGGTCATTCCTGTGTTCATGTTGTACATTCCTaGTTGGCTGGTTGGAGGGGCACTGTAAGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: HLGHSCVHVVHS*LAGWRGTVRGQ
Trigger: CTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGACCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp TTCCTGTGTTCATGTTGTACATTCCTGGTTGGCTGGTaGGAGGGGCACTGTAAGAGGCCAGACCTATCTCTG +
Preference number: 6 (lower is better)
Translates to: FLCSCCTFLVGW*EGHCKRPDLSL
Trigger: CAGAGATAGGTCTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp CAGGCAGGGTCGTCAAGAGGCTCCTGTTTGAGGTCCTaGTTCTGTAAGATAGCAAAGCTATCCTCCAGATCC +
Preference number: 6 (lower is better)
Translates to: QAGSSRGSCLRS*FCKIAKLSSRS
Trigger: GGATCTGGAGGATAGCTTTGCTATCTTACAGAACAAGGACCTCAAACAGGAGCCTCTTGACGACCCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp TTGAACAGGTCCTGGATGTCGTCTTCCGGAACCGTGTaGGCCAGTTCGTCTATTAGTTCTTGCCACTCTTGG +
Preference number: 6 (lower is better)
Translates to: LNRSWMSSSGTV*ASSSISSCHSW
Trigger: CCAAGAGTGGCAAGAACTAATAGACGAACTGGCCAACACGGTTCCGGAAGACGACATCCAGGACCTGTTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS TCA 72 bp CTTGACGGAGGCCCTAAGGGAGACCAACTTGAAGTCTaGTTTGAGTGCTGCTGTTGTTGTTGTTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: LDGGPKGDQLEV*FECCCCCCCCC
Trigger: GCAGCAACAACAACAACAACAGCAGCACTCAAATCAGACTTCAAGTTGGTCTCCCTTAGGGCCTCCGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TCATTCCTGTGTTCATGTTGTACATTCCTGGTTGGCTaGTTGGAGGGGCACTGTAAGAGGCCAGACCTATCT +
Preference number: 6 (lower is better)
Translates to: SFLCSCCTFLVG*LEGHCKRPDLS
Trigger: AGATAGGTCTGGCCTCTTACAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp GAATGCTGCAACATTTGGGTCATTCCTGTGTTCATGTaGTACATTCCTGGTTGGCTGGTTGGAGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: ECCNIWVIPVFM*YIPGWLVGGAL
Trigger: CAGTGCCCCTCCAACCAGCCAACCAGGAATGTACAACATGAACACAGGAATGACCCAAATGTTGCAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp ACGGAGGCCCTAAGGGAGACCAACTTGAAGTCTGATTaGAGTGCTGCTGTTGTTGTTGTTGTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: TEALRETNLKSD*SAAVVVVVAAA
Trigger: AGCAGCAGCAACAACAACAACAACAGCAGCACTCAAATCAGACTTCAAGTTGGTCTCCCTTAGGGCCTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp AAGTCTTCATTGAACAGGTCCTGGATGTCGTCTTCCGGAACCGTGTaGGCCAGTTCGTCTATTAGTTCTTGCCACTCTTGGTCATTCAGG +
Preference number: 6 (lower is better)
Translates to: KSSLNRSWMSSSGTV*ASSSISSCHSWSFR
Trigger: CCTGAATGACCAAGAGTGGCAAGAACTAATAGACGAACTGGCCAACACGGTTCCGGAAGACGACATCCAGGACCTGTTCAATGAAGACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp AAACAGTTCATCAAGCTCTTGCATCCATTCATCCCCTaGGCCACTTTTGATGATGGAGTCCACGAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: KQFIKLLHPFIP*ATFDDGVHEVC
Trigger: ACAGACCTCGTGGACTCCATCATCAAAAGTGGCCCAGGGGATGAATGGATGCAAGAGCTTGATGAACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118075.7
ENSMUST00000121440.4
CDS CAA 72 bp CTGCAGGCTGTTTGCCATTGCAGGCACTATAGTGTTTaGGTTGTTAAAGGCTTGGGGGTACATCATTGGGCT +
Preference number: 6 (lower is better)
Translates to: LQAVCHCRHYSV*VVKGLGVHHWA
Trigger: AGCCCAATGATGTACCCCCAAGCCTTTAACAACCAAAACACTATAGTGCCTGCAATGGCAAACAGCCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp AAGCTGTTCCATATGGACTTGACGGAGGCCCTAAGGGAGACCAACTaGAAGTCTGATTTGAGTGCTGCTGTTGTTGTTGTTGTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: KLFHMDLTEALRETN*KSDLSAAVVVVVAA
Trigger: AGCAGCAACAACAACAACAACAGCAGCACTCAAATCAGACTTCAAGTTGGTCTCCCTTAGGGCCTCCGTCAAGTCCATATGGAACAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp TCCGGAACCGTGTTGGCCAGTTCGTCTATTAGTTCTTaGCACTCTTGGTCATTCAGGTTAATGTCAGAGAAC +
Preference number: 6 (lower is better)
Translates to: SGTVLASSSISS*HSWSFRLMSEN
Trigger: GTTCTCTGACATTAACCTGAATGACCAAGAGTGGCAAGAACTAATAGACGAACTGGCCAACACGGTTCCGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TGCAGGCTGTTTGCCATTGCAGGCACTATAGTGTTTTaGTTGTTAAAGGCTTGGGGGTACATCATTGGGCTA +
Preference number: 6 (lower is better)
Translates to: CRLFAIAGTIVF*LLKAWGYIIGL
Trigger: TAGCCCAATGATGTACCCCCAAGCCTTTAACAACCAAAACACTATAGTGCCTGCAATGGCAAACAGCCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp TCATATTCATGTGATTGGAAGGGAGGTAGTTGTTCATaGTCGTCTTCTGCAGGCTGTTTGCCATTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: SYSCDWKGGSCS*SSSAGCLPLQA
Trigger: TGCCTGCAATGGCAAACAGCCTGCAGAAGACGACCATGAACAACTACCTCCCTTCCAATCACATGAATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS GCA 72 bp GTTGTTCATGGTCGTCTTCTGCAGGCTGTTTGCCATTaGAGGCACTATAGTGTTTTGGTTGTTAAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: VVHGRLLQAVCH*RHYSVLVVKGL
Trigger: CAAGCCTTTAACAACCAAAACACTATAGTGCCTGCAATGGCAAACAGCCTGCAGAAGACGACCATGAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp TTGGTTTTTCTGAAGCAAAAGCTGTTCCATATGGACTaGACGGAGGCCCTAAGGGAGACCAACTTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: LVFLKQKLFHMD*TEALRETNLKS
Trigger: AGACTTCAAGTTGGTCTCCCTTAGGGCCTCCGTCAAGTCCATATGGAACAGCTTTTGCTTCAGAAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 90 bp TTGGGCTATTTGGTTTTTCTGAAGCAAAAGCTGTTCCATATGGACTaGACGGAGGCCCTAAGGGAGACCAACTTGAAGTCTGATTTGAGT +
Preference number: 6 (lower is better)
Translates to: LGYLVFLKQKLFHMD*TEALRETNLKSDLS
Trigger: ACTCAAATCAGACTTCAAGTTGGTCTCCCTTAGGGCCTCCGTCAAGTCCATATGGAACAGCTTTTGCTTCAGAAAAACCAAATAGCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CCA 72 bp GTGTTGGCCAGTTCGTCTATTAGTTCTTGCCACTCTTaGTCATTCAGGTTAATGTCAGAGAACAGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: VLASSSISSCHS*SFRLMSENSLF
Trigger: GAACAAGCTGTTCTCTGACATTAACCTGAATGACCAAGAGTGGCAAGAACTAATAGACGAACTGGCCAACAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4
CDS CAA 72 bp AGGCTGTTTGCCATTGCAGGCACTATAGTGTTTTGGTaGTTAAAGGCTTGGGGGTACATCATTGGGCTATTT +
Preference number: 6 (lower is better)
Translates to: RLFAIAGTIVFW*LKAWGYIIGLF
Trigger: AAATAGCCCAATGATGTACCCCCAAGCCTTTAACAACCAAAACACTATAGTGCCTGCAATGGCAAACAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121440.4