Pregenerated sensors for MAMDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033207Ensembl transcript IDs: ENSMUST00000036069.8, ENSMUST00000236349.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCCTCCTGCAGCTGTATTCAACCAGTGCCCGCAGCCAGGAGATaGTCTGCTCTCCCCTTCTTCTCCACAACAGGGACTCCTCACTAT | + |
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Preference number: 1 (lower is better) Translates to: VSSCSCIQPVPAARR*SALPFFSTTGTPHY Trigger: ATAGTGAGGAGTCCCTGTTGTGGAGAAGAAGGGGAGAGCAGAGCATCTCCTGGCTGCGGGCACTGGTTGAATACAGCTGCAGGAGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 90 bp | CTCCTGCAGCTGTATTCAACCAGTGCCCGCAGCCAGGAGATGCTCTaGTCTCCCCTTCTTCTCCACAACAGGGACTCCTCACTATCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LLQLYSTSARSQEML*SPLLLHNRDSSLSS Trigger: AGAAGATAGTGAGGAGTCCCTGTTGTGGAGAAGAAGGGGAGAGCAGAGCATCTCCTGGCTGCGGGCACTGGTTGAATACAGCTGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 90 bp | GCAGTGTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTaGTTTCTGTCCATACACCATGTGGGAGGCTTCGATGTACATGTA | + |
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Preference number: 1 (lower is better) Translates to: AVFPRDASQRLGQKV*FLSIHHVGGFDVHV Trigger: TACATGTACATCGAAGCCTCCCACATGGTGTATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR TCA 90 bp | CAGCTGCTTCGGTTCCTTTTCTCCTGTGTAAACGCACATTCATCTTaGTCAAAAGTGCATTCTCCAGGTGGAGGTGGAAGTCTTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QLLRFLFSCVNAHSS*SKVHSPGGGGSLAG Trigger: TCCAGCAAGACTTCCACCTCCACCTGGAGAATGCACTTTTGATCAAGATGAATGTGCGTTTACACAGGAGAAAAGGAACCGAAGCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR CCA 90 bp | CCCGTAAGGCAGCATGAATTAGCGCAGACTTATCCTGGGGCTCCATaGGGCGACCTTATTTCCAGAATAATTGTTACCATAAAACACTGC | + |
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Preference number: 1 (lower is better) Translates to: PVRQHELAQTYPGAP*GDLISRIIVTIKHC Trigger: GCAGTGTTTTATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTCTGCGCTAATTCATGCTGCCTTACGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR GCA 90 bp | ACTATCTTCTTCCCTTTTCAAATAAACACTCAGCAGGCCAGTCCCTaGTCCGTACATGTGGTAGAAAAACGTCAAGCAGTGTTTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TIFFPFQINTQQASP*SVHVVEKRQAVFPR Trigger: CCTGGGAAACACTGCTTGACGTTTTTCTACCACATGTACGGAGCAGGGACTGGCCTGCTGAGTGTTTATTTGAAAAGGGAAGAAGATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR TCA 90 bp | ACTCAAAAGGAACACCACCAAGACCTAGTCTCCCAATACATTCACTaGATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: TQKEHHQDLVSQYIH*MQAYKHTRSDCALY Trigger: ATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGTATTGGGAGACTAGGTCTTGGTGGTGTTCCTTTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR CCA 90 bp | AGATATAAACGGCTAGGGTGTCACTCATTTTCAAAAACCCAAAGATaGCGTAATGAAAGCGCACACAGTACTGCATGTTTCCAGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RYKRLGCHSFSKTQR*RNESAHSTACFQGE Trigger: CTCTCCCTGGAAACATGCAGTACTGTGTGCGCTTTCATTACGCCATCTTTGGGTTTTTGAAAATGAGTGACACCCTAGCCGTTTATATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 90 bp | CCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATAAAACACTaGATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAG | + |
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Preference number: 1 (lower is better) Translates to: PWGDLISRIIVTIKH*IPLADITDLALLFK Trigger: CTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR TCA 90 bp | CTTATAAGCACACTCGCTCTGATTGTGCCCTTTATACGTGTACTCTaGAGTGACTGTAACACAGTACATTCTTATTTTAACTGGTACCAA | + |
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Preference number: 1 (lower is better) Translates to: LISTLALIVPFIRVL*SDCNTVHSYFNWYQ Trigger: TTGGTACCAGTTAAAATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR TCA 90 bp | GACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCATTCTTaGAACTCAAAAGGAACACCACCAAGACCTAGTCTCCCAATACAT | + |
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Preference number: 1 (lower is better) Translates to: DITDLALLFKKTSHS*NSKGTPPRPSLPIH Trigger: ATGTATTGGGAGACTAGGTCTTGGTGGTGTTCCTTTTGAGTTTCAAGAATGAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATACACCATCCTACCCCAGTAGTGTaGTCTCCCTTGGGTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RDASQRLGQKVCFLSIHHPTPVV*SPLGPV Trigger: CACAGGACCCAAGGGAGATCACACTACTGGGGTAGG...ATGGTGTATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATAAACTGATTTCCGCTTaGATCCAAACACCCCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: VSQGRLSEAGTKGVLSVHKLISA*IQTPLG Trigger: CCCGAGGGGTGTTTGGATGCAAGCGGAAATCAGTTT...ATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACCATAAAGTCTTCCGATGTAGCCAGGCTGGGATGTAAACTTAGTGTTGGCCCTGTTCCTGTCGTGTaGTCTCCGGCCCGATACATG | + |
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Preference number: 2 (lower is better) Translates to: GTIKSSDVARLGCKLSVGPVPVV*SPARYM Trigger: CATGTATCGGGCCGGAGACCACACGACAGGAACAGG...GCCAACACTAAGTTTACATCCCAGCCTGGCTACATCGGAAGACTTTATGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATGTTGAAAAGGTGCATTaGTATTCAGGTGCTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: VSQGRLSEAGTKGVLSVHVEKVH*YSGAPG Trigger: ACCAGGAGCACCTGAATAGCAATGCACCTTTTCAAC...ATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR CAA 90 bp | ATGGTAATGTCATCCAGGGCTACCAGGCCACAGTCCCAAAAGCTTTaGCACAGGCTCATAAAAACCACCTTTGTGGGCATAGGCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: MVMSSRATRPQSQKL*HRLIKTTFVGIGFL Trigger: CAAGAAGCCTATGCCCACAAAGGTGGTTTTTATGAGCCTGTGCAAAAGCTTTTGGGACTGTGGCCTGGTAGCCCTGGATGACATTACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR CAA 90 bp | CCAGCTGCTTCGGTTCCTTTTCTCCTGTGTAAACGCACATTCATCTaGATCAAAAGTGCATTCTCCAGGTGGAGGTGGAAGTCTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PAASVPFLLCKRTFI*IKSAFSRWRWKSCW Trigger: CCAGCAAGACTTCCACCTCCACCTGGAGAATGCACTTTTGATCAAGATGAATGTGCGTTTACACAGGAGAAAAGGAACCGAAGCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCATTCTCCAGGTGGAGGTGGAAGTCTTGCTGGAGACCGGCAGTTTCCTAGTCTTTTGTTTCCTCTTTaGCTGAAGAGAGGTACAACT | + |
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Preference number: 2 (lower is better) Translates to: VHSPGGGGSLAGDRQFPSLLFPL*LKRGTT Trigger: AGTTGTACCTCTCTTCAGTCAAAGAGGAAACAAAAG...ACTAGGAAACTGCCGGTCTCCAGCAAGACTTCCACCTCCACCTGGAGAATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATAACGCACATTCATCTTaGTCAAAAGTGCATTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSQGRLSEAGTKGVLSVHNAHSS*SKVHSP Trigger: TGGAGAATGCACTTTTGATCAAGATGAATGTGCGTT...ATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR GCA 90 bp | GTACATGTGGTAGAAAAACGTCAAGCAGTGTTTCCCAGGGACGCCTCTCAGAGGCATCTTGATCAAAAGTaGATTCTCCAGGTGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VHVVEKRQAVFPRDASQRHLDQK*ILQVEV Trigger: CACCTCCACCTGGAGAATGCACTTTTGATCAAGATG...CCTCTGAGAGGCGTCCCTGGGAAACACTGCTTGACGTTTTTCTACCACATGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAATTATCTGGTGTCTCCTCCTGCAGCTGTATTCAACCAGTGCCCGCAGCCATCCCAATACATTCACTaGATGCAGGCTTATAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KNYLVSPPAAVFNQCPQPSQYIH*MQAYKH Trigger: GTGCTTATAAGCCTGCATTCAGTGAATGTATTGGGA...TGGCTGCGGGCACTGGTTGAATACAGCTGCAGGAGGAGACACCAGATAATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATGGTAATGTCATCCAGGGCTACCAGGCCACAGTCCCAAAAGCTTTTGCACGGCCCGATACATGTTTaGTTTTACTCTTACTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CMVMSSRATRPQSQKLLHGPIHV*FYSYSG Trigger: ACCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCC...GTGCAAAAGCTTTTGGGACTGTGGCCTGGTAGCCCTGGATGACATTACCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATGGTAATGTCATCCAGGGCTACCAGGCCACAGTCCCAAAAGCTTTTGCACAGTCATTTCAACTTATaGAATAGTCAAGAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: CMVMSSRATRPQSQKLLHSHFNL*NSQEHP Trigger: TGGATGCTCTTGACTATTGCATAAGTTGAAATGACT...GTGCAAAAGCTTTTGGGACTGTGGCCTGGTAGCCCTGGATGACATTACCATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATATGTTTCCTCTTTGACTaGAGAGAGGTACAACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TYPGAPWGDLISRIIVTICFLFD*REVQLL Trigger: CAAAAGTTGTACCTCTCTTCAGTCAAAGAGGAAACA...TATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCCGAGAGCGGGTCTTCTaGAGTCATTTCAACTTATGC | + |
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Preference number: 2 (lower is better) Translates to: FKSNESGSSEVISTYAIVRERVF*SHFNLC Trigger: GCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCG...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | GACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATTTTATACGTGTACTCTaGAGTGACTGTAACACAGTA | + |
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Preference number: 2 (lower is better) Translates to: DLSWGSMGRPYFQNNCYHFIRVL*SDCNTV Trigger: TACTGTGTTACAGTCACTTCAGAGTACACGTATAAA...ATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCAACACTGCATCCCTTTaGCGGACATTACTGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: FKSNESGSSEVISTYAIVNTASL*RTLLTL Trigger: CAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTT...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATATTTATACGTGTACTCTaGAGTGACTGTAACACAGTA | + |
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Preference number: 2 (lower is better) Translates to: TYPGAPWGDLISRIIVTIFIRVL*SDCNTV Trigger: TACTGTGTTACAGTCACTTCAGAGTACACGTATAAA...TATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCTCCCAATACATTCACTaGATGCAGGCTTATAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLSQYIH*MQAYKH Trigger: GTGCTTATAAGCCTGCATTCAGTGAATGTATTGGGA...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCTGTTTCCTCTTTGACTaGAGAGAGGTACAACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLCFLFD*REVQLL Trigger: CAAAAGTTGTACCTCTCTTCAGTCAAAGAGGAAACA...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCGAAGTTTTAGACAGCTaGTTAGCCACACAATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FKSNESGSSEVISTYAIVEVLDS*LATQLH Trigger: GTGCAATTGTGTGGCTAATCAGCTGTCTAAAACTTC...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCCTTTTGTTTCCTCTTTaGCTGAAGAGAGGTACAACT | + |
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Preference number: 2 (lower is better) Translates to: FKSNESGSSEVISTYAIVLLFPL*LKRGTT Trigger: AGTTGTACCTCTCTTCAGTCAAAGAGGAAACAAAAG...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR CAA 90 bp | GACCTTATTTCCAGAATAATTGTTACCATAAAACACTGCATCCCTTaGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: DLISRIIVTIKHCIP*ADITDLALLFKKTS Trigger: AGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTATTCTGGAAATAAGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| 3UTR GCA 72 bp | CCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTaGTTTCTGTCCATACACCATGTGGGAGGCTTCGAT | + |
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Preference number: 3 (lower is better) Translates to: PRDASQRLGQKV*FLSIHHVGGFD Trigger: ATCGAAGCCTCCCACATGGTGTATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 72 bp | CTGTATTCAACCAGTGCCCGCAGCCAGGAGATGCTCTaGTCTCCCCTTCTTCTCCACAACAGGGACTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: LYSTSARSQEML*SPLLLHNRDSS Trigger: TGAGGAGTCCCTGTTGTGGAGAAGAAGGGGAGAGCAGAGCATCTCCTGGCTGCGGGCACTGGTTGAATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 72 bp | TGTTCCTGTCGTGTGGTCTCCGGCCCGATACATGTTTaGTTTTACTCTTACTCTGGTCCAACCCGGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: CSCRVVSGPIHV*FYSYSGPTRTL Trigger: GAGGGTCCGGGTTGGACCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCCGGAGACCACACGACAGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR CCA 72 bp | GTCAAGCAGTGTTTCCCAGGGACGCCTCTCAGAGGCTaGGACAAAAGGTGTGCTTTCTGTCCATACACCATG | + |
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Preference number: 3 (lower is better) Translates to: VKQCFPGTPLRG*DKRCAFCPYTM Trigger: CATGGTGTATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAACACTGCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATGTGGGCATAGGCTTCTaGAAACTGATTTCCGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: VSQGRLSEAGTKGVLSVHVGIGF*KLISAC Trigger: GCAAGCGGAAATCAGTTTCAAGAAGCCTATGCCCAC...ATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 72 bp | TTTGTGGGCATAGGCTTCTTGAAACTGATTTCCGCTTaGATCCAAACACCCCTCGGGGACTCGAGCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: FVGIGFLKLISA*IQTPLGDSSTD Trigger: GTCTGTGCTCGAGTCCCCGAGGGGTGTTTGGATGCAAGCGGAAATCAGTTTCAAGAAGCCTATGCCCACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATAAGCCCTGTCTGATTTaGGCAGTGAACAGGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: VSQGRLSEAGTKGVLSVHKPCLI*AVNRRE Trigger: TTCTCTCCTGTTCACTGCCAAAATCAGACAGGGCTT...ATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR TCA 72 bp | GGCCTATCTCAAAATCGCAGCTGGTTTCCACAGCACTaGAAGGAAGCCCTGTCTGATTTTGGCAGTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: GLSQNRSWFPQH*KEALSDFGSEQ Trigger: CTGTTCACTGCCAAAATCAGACAGGGCTTCCTTTCAGTGCTGTGGAAACCAGCTGCGATTTTGAGATAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR CAA 90 bp | TGTATGGTAATGTCATCCAGGGCTACCAGGCCACAGTCCCAAAAGCTTTTGCACCGGCCCGATACATGTTaGCTTTTACTCTTACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: CMVMSSRATRPQSQKLLHRPDTC*LLLLLW Trigger: CCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCCG...GTGCAAAAGCTTTTGGGACTGTGGCCTGGTAGCCCTGGATGACATTACCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 72 bp | TGGTCCAACCCGGACCCTCTTTGTCTTGATAAAAGTTaGAGAGGCCTATCTCAAAATCGCAGCTGGTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: WSNPDPLCLDKS*RGLSQNRSWFP Trigger: TGGAAACCAGCTGCGATTTTGAGATAGGCCTCTGCAACTTTTATCAAGACAAAGAGGGTCCGGGTTGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATAGAGAGGTACAACTTTaGTCTTCTTGCTCTAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: VSQGRLSEAGTKGVLSVHREVQL*SSCSKL Trigger: TAACTTAGAGCAAGAAGACAAAAGTTGTACCTCTCT...ATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR-3UTR CAA 90 bp | GACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATCGGACCCTCTTTGTCTaGATAAAAGTTGCAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: DLSWGSMGRPYFQNNCYHRTLFV*IKVAEA Trigger: GGCCTCTGCAACTTTTATCAAGACAAAGAGGGTCCG...ATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
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| 3UTR GCA 72 bp | TTCCCTTTTCAAATAAACACTCAGCAGGCCAGTCCCTaGTCCGTACATGTGGTAGAAAAACGTCAAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPFQINTQQASP*SVHVVEKRQAV Trigger: CACTGCTTGACGTTTTTCTACCACATGTACGGAGCAGGGACTGGCCTGCTGAGTGTTTATTTGAAAAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAAGGTGTGCTTTCTGTCCATACACCATGTGGGAGGCTTCGATGTACATGAGACCAGATCTTCTCTaGAACCACATGGTTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DKRCAFCPYTMWEASMYMRPDLL*NHMVFF Trigger: GAAGAAAACCATGTGGTTCAAGAGAAGATCTGGTCT...CATGTACATCGAAGCCTCCCACATGGTGTATGGACAGAAAGCACACCTTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAAATTATCTGGTGTCTCCTCCTGCAGCTGTATTCAACCAGTGCCCGCAGCAAACGCACATTCATCTaGATCAAAAGTGCATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SKIIWCLLLQLYSTSARSKRTFI*IKSAFS Trigger: GGAGAATGCACTTTTGATCAAGATGAATGTGCGTTT...GCTGCGGGCACTGGTTGAATACAGCTGCAGGAGGAGACACCAGATAATTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| 3UTR CCA 72 bp | CAGCATGAATTAGCGCAGACTTATCCTGGGGCTCCATaGGGCGACCTTATTTCCAGAATAATTGTTACCATA | + |
|
Preference number: 3 (lower is better) Translates to: QHELAQTYPGAP*GDLISRIIVTI Trigger: TATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTCTGCGCTAATTCATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| 3UTR CCA 72 bp | CGGCTAGGGTGTCACTCATTTTCAAAAACCCAAAGATaGCGTAATGAAAGCGCACACAGTACTGCATGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLGCHSFSKTQR*RNESAHSTACF Trigger: GAAACATGCAGTACTGTGTGCGCTTTCATTACGCCATCTTTGGGTTTTTGAAAATGAGTGACACCCTAGCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATATCTTTTGTTTCCTCTTaGACTGAAGAGAGGTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: TFTECRLISTLALIVPFISFVSS*TEERYN Trigger: GTTGTACCTCTCTTCAGTCAAAGAGGAAACAAAAGA...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCAGAGAGGTACAACTTTaGTCTTCTTGCTCTAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLREVQL*SSCSKL Trigger: TAACTTAGAGCAAGAAGACAAAAGTTGTACCTCTCT...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCTCTTTTGTTTCCTCTTaGACTGAAGAGAGGTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: FKSNESGSSEVISTYAIVSFVSS*TEERYN Trigger: GTTGTACCTCTCTTCAGTCAAAGAGGAAACAAAAGA...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCTTCAAGCTTGCCTTGTaGAAAAGGTGCATTGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: FKSNESGSSEVISTYAIVFKLAL*KRCIAI Trigger: AATAGCAATGCACCTTTTCAACAAGGCAAGCTTGAA...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| 3UTR TCA 72 bp | ACACTCGCTCTGATTGTGCCCTTTATACGTGTACTCTaGAGTGACTGTAACACAGTACATTCTTATTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLALIVPFIRVL*SDCNTVHSYFN Trigger: GTTAAAATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCACAATCAGAGCGAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| 3UTR TCA 72 bp | GACCTTGCATTACTATTTAAGAAAACTTCTCATTCTTaGAACTCAAAAGGAACACCACCAAGACCTAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLALLFKKTSHS*NSKGTPPRPSL Trigger: GAGACTAGGTCTTGGTGGTGTTCCTTTTGAGTTTCAAGAATGAGAAGTTTTCTTAAATAGTAATGCAAGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATAGATCCTGTGGGAGGATaGAGTGGGTGTTCTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPRDASQRLGQKVCFLSIDPVGG*SGCSSQ Trigger: CTGCGAAGAACACCCACTCCATCCTCCCACAGGATC...TATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAACACCCCTCGGGGACTCGAGCACAGACCAGATCTTCTCTTGAACCAGAAGGTGTGATCCTGTaGGAGGATGGAGTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKHPSGTRAQTRSSLEPEGVIL*EDGVGV Trigger: AACACCCACTCCATCCTCCCACAGGATCACACCTTC...TGGTTCAAGAGAAGATCTGGTCTGTGCTCGAGTCCCCGAGGGGTGTTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| 3UTR CAA 72 bp | CTGTTCCTGTCGTGTGGTCTCCGGCCCGATACATGTTaGCTTTTACTCTTACTCTGGTCCAACCCGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLSCGLRPDTC*LLLLLWSNPDP Trigger: AGGGTCCGGGTTGGACCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCCGGAGACCACACGACAGGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| 3UTR CAA 72 bp | CTTTGTGGGCATAGGCTTCTTGAAACTGATTTCCGCTaGCATCCAAACACCCCTCGGGGACTCGAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCGHRLLETDFR*HPNTPRGLEHR Trigger: TCTGTGCTCGAGTCCCCGAGGGGTGTTTGGATGCAAGCGGAAATCAGTTTCAAGAAGCCTATGCCCACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGCGCAAGGTTCCAGGCTaGATTGCCTGGGCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVKPVACTSSNSCQMCWGRKVPG*IAWAVH Trigger: GTGGACAGCCCAGGCAATGCAGCCTGGAACCTTGCG...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | GTGCATTCTCCAGGTGGAGGTGGAAGTCTTGCTGGAGACCGGCAGTTTCCTAGTCGAACCAGTTCACATTaGGATTCCAGCGGTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VHSPGGGGSLAGDRQFPSRTSSH*DSSGSQ Trigger: TTGTGAACCGCTGGAATCCCAATGTGAACTGGTTCG...ACTAGGAAACTGCCGGTCTCCAGCAAGACTTCCACCTCCACCTGGAGAATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | TGTCGTGTGGTCTCCGGCCCGATACATGTTTGCTTTTACTCTTACTCTGGTCCAACAGCTTTCTCCCCTTaGCTGGCAAAAGAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRVVSGPIHVCFYSYSGPTAFSP*LAKEVS Trigger: GGACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGT...TGGACCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCCGGAGACCACACGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGAGAGGTTCAGCTGGCTaGGGTCTGACACAGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVKPVACTSSNSCQMCWGRGSAG*GLTQIP Trigger: CGGGATCTGTGTCAGACCCCAGCCAGCTGAACCTCT...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | ACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATACCTGTTCCTGTCGTGTaGTCTCCGGCCCGATACATG | + |
|
Preference number: 4 (lower is better) Translates to: TYPGAPWGDLISRIIVTIPVPVV*SPARYM Trigger: CATGTATCGGGCCGGAGACCACACGACAGGAACAGG...TATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR TCA 90 bp | GACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATTATGAGCCAGCTGTCTaGAGGCTCCTTAGTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLSWGSMGRPYFQNNCYHYEPAV*RLLSGP Trigger: TGGTCCACTAAGGAGCCTTCAGACAGCTGGCTCATA...ATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGTTCCCCTGTGCCAGCTaGTTCGGTTCCTTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKPVACTSSNSCQMCWGFPCAS*FGSFSP Trigger: AGGAGAAAAGGAACCGAAGCAGCTGGCACAGGGGAA...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | ACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATAAGCCAGGAGATGCTCTaGTCTCCCCTTCTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TYPGAPWGDLISRIIVTISQEML*SPLLLH Trigger: GTGGAGAAGAAGGGGAGAGCAGAGCATCTCCTGGCT...TATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | GGGACCATAAAGTCTTCCGATGTAGCCAGGCTGGGATGTAAACTTAGTGTTGGCCTTTCTCCCCTTGCCTaGCAAAAGAGGTGTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GTIKSSDVARLGCKLSVGLSPLA*QKRCPY Trigger: ATATGGACACCTCTTTTGCCAGGCAAGGGGAGAAAG...GCCAACACTAAGTTTACATCCCAGCCTGGCTACATCGGAAGACTTTATGGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGAACACCACCAAGACCTAGTCTCCCAATACATTCACTGAATGCAGGCTTACAGATCCCGGAGGTGTaGTTATCTGGTAGACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTPPRPSLPIHSLNAGLQIPEV*LSGRPG Trigger: GCCTGGTCTACCAGATAACCACACCTCCGGGATCTG...TAAGCCTGCATTCAGTGAATGTATTGGGAGACTAGGTCTTGGTGGTGTTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATAAGAGACAGCCAGACATaGAGGCTGTGGTCACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFTECRLISTLALIVPFIRDSQT*RLWSLG Trigger: CCCCAGTGACCACAGCCTCCATGTCTGGCTGTCTCT...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR TCA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCCCTACCCCAGTAGTGTaGTCTCCCTTGGGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLPTPVV*SPLGPV Trigger: CACAGGACCCAAGGGAGATCACACTACTGGGGTAGG...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATACAGCAGGCCAGTCCCTaGTCCGTACATGTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFTECRLISTLALIVPFIQQASP*SVHVVE Trigger: TTCTACCACATGTACGGAGCAGGGACTGGCCTGCTG...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCCCCGCAGCCAGGAGATaGTCTGCTCTCCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKSNESGSSEVISTYAIVPAARR*SALPFF Trigger: GAAGAAGGGGAGAGCAGAGCATCTCCTGGCTGCGGG...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | GACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATTCTGGTGTCTCCTCCTaGAGCTGTATTCAACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLSWGSMGRPYFQNNCYHSGVSS*SCIQPV Trigger: CACTGGTTGAATACAGCTGCAGGAGGAGACACCAGA...ATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAACACCACCAAGACCTAGTCTCCCAATACATTCACTGAATGCAGGCTTAGAAGGTGTGATCCTGTaGGAGGATGGAGTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGTPPRPSLPIHSLNAGLEGVIL*EDGVGV Trigger: AACACCCACTCCATCCTCCCACAGGATCACACCTTC...TAAGCCTGCATTCAGTGAATGTATTGGGAGACTAGGTCTTGGTGGTGTTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATAACAGCTTTCTCCCCTTaGCTGGCAAAAGAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFTECRLISTLALIVPFITAFSP*LAKEVS Trigger: GGACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGT...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCGCTGTATTCAACCAGTaGCCGCAGCCAGGAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLAVFNQ*PQPGDA Trigger: AGCATCTCCTGGCTGCGGGCACTGGTTGAATACAGC...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTGTCCTGTGTAGGAGGTaGGCGTTTCTCCCCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCPLYVYSEVTVTQYILIVLCRR*AFLPFP Trigger: GGGGAAGGGGAGAAACGCCCACCTCCTACACAGGAC...AATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATATGGTCACTGGGGAGATaGGCTGGGCTACTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFKSNESGSSEVISTYAIWSLGR*AGLLPG Trigger: TCCAGGAAGTAGCCCAGCTCATCTCCCCAGTGACCA...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATATTCCACTCCTCAGCCTaGAAATCAGAACTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFTECRLISTLALIVPFIFHSSA*KSELSS Trigger: GCTGCTGAGTTCTGATTTGCAGGCTGAGGAGTGGAA...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGCATCTTGATCAAAAGTaGATTCTCCAGGTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKPVACTSSNSCQMCWGHLDQK*ILQVEV Trigger: CACCTCCACCTGGAGAATGCACTTTTGATCAAGATG...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGCTGGGACAAAAGGTGTaGTTTCTGTCCATACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVKPVACTSSNSCQMCWGLGQKV*FLSIHH Trigger: ATGGTGTATGGACAGAAAGCACACCTTTTGTCCCAG...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCCAGATCCCGGAGGTGTaGTTATCTGGTAGACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSNESGSSEVISTYAIVQIPEV*LSGRPG Trigger: GCCTGGTCTACCAGATAACCACACCTCCGGGATCTG...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTGGAGGCTGTGGTCACTaGGGAGATGAGCTGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YIEIIVFKSNESGSSEVIGGCGH*GDELGY Trigger: GTAGCCCAGCTCATCTCCCCAGTGACCACAGCCTCC...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | ACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATATGTCCATACACCATGTaGGAGGCTTCGATGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: TYPGAPWGDLISRIIVTICPYTM*EASMYM Trigger: CATGTACATCGAAGCCTCCCACATGGTGTATGGACA...TATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGGCTTCAAAAATTATCTaGTGTCTCCTCCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKPVACTSSNSCQMCWGASKII*CLLLQL Trigger: CAGCTGCAGGAGGAGACACCAGATAATTTTTGAAGC...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| 3UTR CAA 72 bp | TCGGTTCCTTTTCTCCTGTGTAAACGCACATTCATCTaGATCAAAAGTGCATTCTCCAGGTGGAGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVPFLLCKRTFI*IKSAFSRWRWK Trigger: CTTCCACCTCCACCTGGAGAATGCACTTTTGATCAAGATGAATGTGCGTTTACACAGGAGAAAAGGAACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCTTCCACTCCTCAGCCTaGAAATCAGAACTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLFHSSA*KSELSS Trigger: GCTGCTGAGTTCTGATTTGCAGGCTGAGGAGTGGAA...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR GCA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTGGTTCCAGGCTGCATTaGCTGGGCTGTCCACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIEIIVFKSNESGSSEVIGSRLH*LGCPLS Trigger: GGAAAGTGGACAGCCCAGGCAATGCAGCCTGGAACC...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTGTTACCATAAAACACTGCATCCCTTTGGCGGACATTACTGACCTTGCAAAGCGCACACAGTACTaGATGTTTCCAGGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIVTIKHCIPLADITDLAKRTQY*MFPGRE Trigger: CTCTCTCCCTGGAAACATGCAGTACTGTGTGCGCTT...TGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTGATCCTGTGGGAGGATaGAGTGGGTGTTCTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPLYVYSEVTVTQYILIDPVGG*SGCSSQ Trigger: CTGCGAAGAACACCCACTCCATCCTCCCACAGGATC...AATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATATATGAGCCAGCTGTCTaGAGGCTCCTTAGTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VFKSNESGSSEVISTYAIYEPAV*RLLSGP Trigger: TGGTCCACTAAGGAGCCTTCAGACAGCTGGCTCATA...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR TCA 90 bp | ATAATTGTTACCATAAAACACTGCATCCCTTTGGCGGACATTACTGACCTTGCATTCTTGGAGCTGTTTTaGAGATCCAGGCTGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: IIVTIKHCIPLADITDLAFLELF*RSRLAM Trigger: CATAGCCAGCCTGGATCTTCAAAACAGCTCCAAGAA...TGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCAGCCGGCTGTCATCTTaGTTTCAAAGAGGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSNESGSSEVISTYAIVSRLSS*FQRGQC Trigger: GCATTGCCCTCTTTGAAATCAAGATGACAGCCGGCT...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCCTTTGGCGGACATTACTGACCTTGCATTACTATTTAAGAAAACTTCTCCGAACCAGTTCACATTaGGATTCCAGCGGTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLWRTLLTLHYYLRKLLRTSSH*DSSGSQ Trigger: TTGTGAACCGCTGGAATCCCAATGTGAACTGGTTCG...GAGAAGTTTTCTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTACTGGGGAGATGAGCTaGGCTACTTCCTGGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YIEIIVFKSNESGSSEVITGEMS*ATSWKC Trigger: GCACTTCCAGGAAGTAGCCCAGCTCATCTCCCCAGT...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTCCAGGCTGCATTGCCTaGGCTGTCCACTTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIEIIVFKSNESGSSEVIPGCIA*AVHFPN Trigger: ATTTGGAAAGTGGACAGCCCAGGCAATGCAGCCTGG...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTTTAAGTGCATTCTCCAGGTaGAGGTGGAAGTCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLYVYSEVTVTQYILILSAFSR*RWKSCW Trigger: CCAGCAAGACTTCCACCTCCACCTGGAGAATGCACT...TAAAATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTTTCTTGGAGCTGTTTTaGAGATCCAGGCTGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LCPLYVYSEVTVTQYILIFLELF*RSRLAM Trigger: CATAGCCAGCCTGGATCTTCAAAACAGCTCCAAGAA...AATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATACTTCCTGGAAGTGCTTaGCATACACAGAGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VFKSNESGSSEVISTYAILPGSA*HTQSPH Trigger: ATGTGGACTCTGTGTATGTCAAGCACTTCCAGGAAG...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGCTACTTCCTGGAAGTaGTTGACATACACAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFKSNESGSSEVISTYAIATSWK*LTYTES Trigger: GGACTCTGTGTATGTCAAGCACTTCCAGGAAGTAGC...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTTTAAAACTGATTTCCGCTTaGATCCAAACACCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLYVYSEVTVTQYILILKLISA*IQTPLG Trigger: CCCGAGGGGTGTTTGGATGCAAGCGGAAATCAGTTT...TAAAATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTCTTTCTCCCCTTGCCTaGCAAAAGAGGTGTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPLYVYSEVTVTQYILILSPLA*QKRCPY Trigger: ATATGGACACCTCTTTTGCCAGGCAAGGGGAGAAAG...AATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTTTACGATATCACTTCTTATaGACACTCCTCGAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPLYVYSEVTVTQYILILRYHFL*TLLEWL Trigger: AAGCCACTCGAGGAGTGTCCATAAGAAGTGATATCG...TAAAATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAAACGCACATTCATCTTaGTCAAAAGTGCATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFKSNESGSSEVISTYAINAHSS*SKVHSP Trigger: TGGAGAATGCACTTTTGATCAAGATGAATGTGCGTT...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR GCA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTGGCCCGATACATGTTTaGTTTTACTCTTACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YIEIIVFKSNESGSSEVIGPIHV*FYSYSG Trigger: ACCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCC...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CCA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTGGACACTCCTCGAGTaGCTTCAAAAATTATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YIEIIVFKSNESGSSEVIWTLLE*LQKLSG Trigger: ACCAGATAATTTTTGAAGCCACTCGAGGAGTGTCCA...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| 3UTR CAA 72 bp | TCCAGAATAATTGTTACCATAAAACACTGCATCCCTTaGGCGGACATTACTGACCTTGCATTACTATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRIIVTIKHCIP*ADITDLALLFK Trigger: CTTAAATAGTAATGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTATTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS GCA 90 bp | CATGGGGTAAGGAGCACTAAATTCCACCTCCGCAAGGTTCCAGGCTaGATTGCCTGGGCTGTCCACTTTCCAAATCTCCTCGTACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGVRSTKFHLRKVPG*IAWAVHFPNLLVQA Trigger: GGCCTGTACGAGGAGATTTGGAAAGTGGACAGCCCAGGCAATGCAGCCTGGAACCTTGCGGAGGTGGAATTTAGTGCTCCTTACCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS CCA 90 bp | GAGAGACAGCCAGACATGGAGGCTGTGGTCACTGGGGAGATGAGCTaGGCTACTTCCTGGAAGTGCTTGACATACACAGAGTCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: ERQPDMEAVVTGEMS*ATSWKCLTYTESTY Trigger: GTATGTGGACTCTGTGTATGTCAAGCACTTCCAGGAAGTAGCCCAGCTCATCTCCCCAGTGACCACAGCCTCCATGTCTGGCTGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS CCA 90 bp | CTGGTAATAGAACGAGAGACAGCCAGACATGGAGGCTGTGGTCACTaGGGAGATGAGCTGGGCTACTTCCTGGAAGTGCTTGACATACAC | + |
|
Preference number: 5 (lower is better) Translates to: LVIERETARHGGCGH*GDELGYFLEVLDIH Trigger: GTGTATGTCAAGCACTTCCAGGAAGTAGCCCAGCTCATCTCCCCAGTGACCACAGCCTCCATGTCTGGCTGTCTCTCGTTCTATTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS TCA 90 bp | CTTGGAGCTGTTTTGAAGATCCAGGCTGGCTATGAGCCAGCTGTCTaGAGGCTCCTTAGTGGACCAAAGCAAGCGATCGAAGCTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LGAVLKIQAGYEPAV*RLLSGPKQAIEALI Trigger: GATGAGAGCTTCGATCGCTTGCTTTGGTCCACTAAGGAGCCTTCAGACAGCTGGCTCATAGCCAGCCTGGATCTTCAAAACAGCTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCATAAAGTCTTCCGATGTAGCCAGGCTGGGATGTAAACTTAGTGTTGGCCACAGCTTTCTCCCCTaGCCTGGCAAAAGAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTIKSSDVARLGCKLSVGHSFLP*PGKRGV Trigger: GACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGTG...GCCAACACTAAGTTTACATCCCAGCCTGGCTACATCGGAAGACTTTATGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGACGCCTCTCAGAGGCTGGGACAAAAGGTGTGCTTTCTGTCCATAACGAACCAGTTCACATaGGGATTCCAGCGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FPRDASQRLGQKVCFLSITNQFT*GFQRFT Trigger: TGTGAACCGCTGGAATCCCAATGTGAACTGGTTCGT...TATGGACAGAAAGCACACCTTTTGTCCCAGCCTCTGAGAGGCGTCCCTGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | GACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATAGGTTCCAGGCTGCATaGCCTGGGCTGTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLSWGSMGRPYFQNNCYHRFQAA*PGLSTF Trigger: GAAAGTGGACAGCCCAGGCAATGCAGCCTGGAACCT...ATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS CCA 90 bp | AGTGGGTGTTCTTCGCAGTTCCTCCTCCCACGAACCAGTTCACATTaGGATTCCAGCGGTTCACAAAGCCACAGAGATGGTTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SGCSSQFLLPRTSSH*DSSGSQSHRDGFLQ Trigger: TTGAAGAAAACCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAATGTGAACTGGTTCGTGGGAGGAGGAACTGCGAAGAACACCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | ATAATTGTTACCATAAAACACTGCATCCCTTTGGCGGACATTACTGACCTTGCAGGCAAGCTGCAAGGCTaGCACTACCAGCAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: IIVTIKHCIPLADITDLAGKLQG*HYQQDP Trigger: GGGGTCCTGCTGGTAGTGCAAGCCTTGCAGCTTGCC...TGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGGAAACTGATTTCCGCTaGCATCCAAACACCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVKPVACTSSNSCQMCWGETDFR*HPNTPR Trigger: CCGAGGGGTGTTTGGATGCAAGCGGAAATCAGTTTC...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS CCA 90 bp | CAGCCTGCAAATCAGAACTCAGCAGCACAGCTTTCTCCCCTTGCCTaGCAAAAGAGGTGTCCATATAGACATAATGGCCTTCCTCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: QPANQNSAAQLSPLA*QKRCPYRHNGLPHL Trigger: TAAATGAGGAAGGCCATTATGTCTATATGGACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGTGCTGCTGAGTTCTGATTTGCAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGGTGGGCATAGGCTTCTaGAAACTGATTTCCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVKPVACTSSNSCQMCWGVGIGF*KLISAC Trigger: GCAAGCGGAAATCAGTTTCAAGAAGCCTATGCCCAC...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS TCA 90 bp | CCCAGGACACCTTCTATCAAAATCTTGAATTTCTTGGAGCTGTTTTaGAGATCCAGGCTGGCTATGAGCCAGCTGTCTGAAGGCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRTPSIKILNFLELF*RSRLAMSQLSEGSL Trigger: TAAGGAGCCTTCAGACAGCTGGCTCATAGCCAGCCTGGATCTTCAAAACAGCTCCAAGAAATTCAAGATTTTGATAGAAGGTGTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAAACCAGTAGCCTGTACTTCTAGTAACAGTTGTCAGATGTGCTGGGGGACTTCCTGGAAGTGCTaGACATACACAGAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SVKPVACTSSNSCQMCWGTSWKC*TYTEST Trigger: TGTGGACTCTGTGTATGTCAAGCACTTCCAGGAAGT...CCCCCAGCACATCTGACAACTGTTACTAGAAGTACAGGCTACTGGTTTTACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | TACATAGAGATAATAGTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTCACAGCTTTCTCCCCTaGCCTGGCAAAAGAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YIEIIVFKSNESGSSEVIHSFLP*PGKRGV Trigger: GACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGTG...AATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAACTATTATCTCTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCCGGACCCTCTTTGTCTaGATAAAAGTTGCAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FKSNESGSSEVISTYAIVRTLFV*IKVAEA Trigger: GGCCTCTGCAACTTTTATCAAGACAAAGAGGGTCCG...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | GACTTATCCTGGGGCTCCATGGGGCGACCTTATTTCCAGAATAATTGTTACCATAAACGCACATTCATCTaGATCAAAAGTGCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLSWGSMGRPYFQNNCYHKRTFI*IKSAFS Trigger: GGAGAATGCACTTTTGATCAAGATGAATGTGCGTTT...ATGGTAACAATTATTCTGGAAATAAGGTCGCCCCATGGAGCCCCAGGATAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATACTGATGACTGTTCAGTaGTATCTTCCATTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TFTECRLISTLALIVPFILMTVQ*YLPFLH Trigger: GTGCAGGAATGGAAGATACAACTGAACAGTCATCAG...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | ATAATTGTTACCATAAAACACTGCATCCCTTTGGCGGACATTACTGACCTTGCATTTCTTGGAGCTGTTTaGAAGATCCAGGCTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: IIVTIKHCIPLADITDLAFLGAV*KIQAGY Trigger: ATAGCCAGCCTGGATCTTCAAAACAGCTCCAAGAAA...TGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATAGTCAAGCCCTGTCTGATTTaGGCAGTGAACAGGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FKSNESGSSEVISTYAIVKPCLI*AVNRRE Trigger: TTCTCTCCTGTTCACTGCCAAAATCAGACAGGGCTT...GACTATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCACTGAATGCAGGCTTATAAGCACACTCGCTCTGATTGTGCCCTTTATAAGACCAGATCTTCTCTaGAACCACATGGTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFTECRLISTLALIVPFIRPDLL*NHMVFF Trigger: GAAGAAAACCATGTGGTTCAAGAGAAGATCTGGTCT...TATAAAGGGCACAATCAGAGCGAGTGTGCTTATAAGCCTGCATTCAGTGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTTATACGTGTACTCTGAAGTGACTGTAACACAGTACATTCTTATTTTAACGAACCAGTTCACATaGGGATTCCAGCGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CPLYVYSEVTVTQYILILTNQFT*GFQRFT Trigger: TGTGAACCGCTGGAATCCCAATGTGAACTGGTTCGT...TAAAATAAGAATGTACTGTGTTACAGTCACTTCAGAGTACACGTATAAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATACGGCCCGATACATGTTaGCTTTTACTCTTACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFKSNESGSSEVISTYAIRPDTC*LLLLLW Trigger: CCAGAGTAAGAGTAAAAGCAAACATGTATCGGGCCG...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTCAAAAGTAACGAGAGCGGGTCTTCTGAAGTCATTTCAACTTATGCAATATTTCTTGGAGCTGTTTaGAAGATCCAGGCTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: VFKSNESGSSEVISTYAIFLGAV*KIQAGY Trigger: ATAGCCAGCCTGGATCTTCAAAACAGCTCCAAGAAA...TATTGCATAAGTTGAAATGACTTCAGAAGACCCGCTCTCGTTACTTTTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
||
| CDS-3UTR CAA 90 bp | ATAATTGTTACCATAAAACACTGCATCCCTTTGGCGGACATTACTGACCTTGCACCTCCTTTGGGACCATaGAAAGCAACTTCAAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: IIVTIKHCIPLADITDLAPPLGP*KATSKI Trigger: TATTTTTGAAGTTGCTTTCAATGGTCCCAAAGGAGG...TGCAAGGTCAGTAATGTCCGCCAAAGGGATGCAGTGTTTTATGGTAACAATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
||
| CDS GCA 72 bp | CAGGAGCCAGCGGGCAGGTCTAGGGCATTGGCAAGCTaGAAGGCTTGCACTACCAGCAGGACCCCTTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QEPAGRSRALAS*KACTTSRTPSS Trigger: ACTAGAAGGGGTCCTGCTGGTAGTGCAAGCCTTGCAGCTTGCCAATGCCCTAGACCTGCCCGCTGGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CCA 72 bp | TCAGCTGGCTGGGGTCTGACACAGATCCCGGAGGTGTaGTTATCTGGTAGACCAGGCGCAAACAGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SAGWGLTQIPEV*LSGRPGANSST Trigger: AGTGGAACTGTTTGCGCCTGGTCTACCAGATAACCACACCTCCGGGATCTGTGTCAGACCCCAGCCAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CCA 72 bp | GAACGAGAGACAGCCAGACATGGAGGCTGTGGTCACTaGGGAGATGAGCTGGGCTACTTCCTGGAAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ERETARHGGCGH*GDELGYFLEVL Trigger: AAGCACTTCCAGGAAGTAGCCCAGCTCATCTCCCCAGTGACCACAGCCTCCATGTCTGGCTGTCTCTCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
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| CDS CCA 72 bp | CCAGACATGGAGGCTGTGGTCACTGGGGAGATGAGCTaGGCTACTTCCTGGAAGTGCTTGACATACACAGAG | + |
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Preference number: 6 (lower is better) Translates to: PDMEAVVTGEMS*ATSWKCLTYTE Trigger: CTCTGTGTATGTCAAGCACTTCCAGGAAGTAGCCCAGCTCATCTCCCCAGTGACCACAGCCTCCATGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
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| CDS GCA 72 bp | AGGAGCACTAAATTCCACCTCCGCAAGGTTCCAGGCTaGATTGCCTGGGCTGTCCACTTTCCAAATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RSTKFHLRKVPG*IAWAVHFPNLL Trigger: GAGGAGATTTGGAAAGTGGACAGCCCAGGCAATGCAGCCTGGAACCTTGCGGAGGTGGAATTTAGTGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
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| CDS CAA 72 bp | GCACTAAATTCCACCTCCGCAAGGTTCCAGGCTGCATaGCCTGGGCTGTCCACTTTCCAAATCTCCTCGTAC | + |
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Preference number: 6 (lower is better) Translates to: ALNSTSARFQAA*PGLSTFQISSY Trigger: GTACGAGGAGATTTGGAAAGTGGACAGCCCAGGCAATGCAGCCTGGAACCTTGCGGAGGTGGAATTTAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036069.8 |
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| CDS CCA 72 bp | TCTTCGCAGTTCCTCCTCCCACGAACCAGTTCACATTaGGATTCCAGCGGTTCACAAAGCCACAGAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SSQFLLPRTSSH*DSSGSQSHRDG Trigger: ACCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAATGTGAACTGGTTCGTGGGAGGAGGAACTGCGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CAA 72 bp | TTCTTCGCAGTTCCTCCTCCCACGAACCAGTTCACATaGGGATTCCAGCGGTTCACAAAGCCACAGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: FFAVPPPTNQFT*GFQRFTKPQRW Trigger: CCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAATGTGAACTGGTTCGTGGGAGGAGGAACTGCGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CAA 90 bp | CTCCTCAGCCTGCAAATCAGAACTCAGCAGCACAGCTTTCTCCCCTaGCCTGGCAAAAGAGGTGTCCATATAGACATAATGGCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLSLQIRTQQHSFLP*PGKRGVHIDIMAFL Trigger: GAGGAAGGCCATTATGTCTATATGGACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGTGCTGCTGAGTTCTGATTTGCAGGCTGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CAA 90 bp | GAGTGGGTGTTCTTCGCAGTTCCTCCTCCCACGAACCAGTTCACATaGGGATTCCAGCGGTTCACAAAGCCACAGAGATGGTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: EWVFFAVPPPTNQFT*GFQRFTKPQRWFSS Trigger: TGAAGAAAACCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAATGTGAACTGGTTCGTGGGAGGAGGAACTGCGAAGAACACCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS TCA 72 bp | GTTTTGAAGATCCAGGCTGGCTATGAGCCAGCTGTCTaGAGGCTCCTTAGTGGACCAAAGCAAGCGATCGAA | + |
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Preference number: 6 (lower is better) Translates to: VLKIQAGYEPAV*RLLSGPKQAIE Trigger: TTCGATCGCTTGCTTTGGTCCACTAAGGAGCCTTCAGACAGCTGGCTCATAGCCAGCCTGGATCTTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CCA 72 bp | AATCAGAACTCAGCAGCACAGCTTTCTCCCCTTGCCTaGCAAAAGAGGTGTCCATATAGACATAATGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: NQNSAAQLSPLA*QKRCPYRHNGL Trigger: AAGGCCATTATGTCTATATGGACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGTGCTGCTGAGTTCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS CAA 72 bp | CTGCAAATCAGAACTCAGCAGCACAGCTTTCTCCCCTaGCCTGGCAAAAGAGGTGTCCATATAGACATAATG | + |
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Preference number: 6 (lower is better) Translates to: LQIRTQQHSFLP*PGKRGVHIDIM Trigger: CATTATGTCTATATGGACACCTCTTTTGCCAGGCAAGGGGAGAAAGCTGTGCTGCTGAGTTCTGATTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS TCA 72 bp | CCTTCTATCAAAATCTTGAATTTCTTGGAGCTGTTTTaGAGATCCAGGCTGGCTATGAGCCAGCTGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PSIKILNFLELF*RSRLAMSQLSE Trigger: TTCAGACAGCTGGCTCATAGCCAGCCTGGATCTTCAAAACAGCTCCAAGAAATTCAAGATTTTGATAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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| CDS TCA 72 bp | TGTTTCCTTGTCCCAGGACACCTTCTATCAAAATCTTaGATTTCTTGGAGCTGTTTTGAAGATCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CFLVPGHLLSKS*ISWSCFEDPGW Trigger: CCAGCCTGGATCTTCAAAACAGCTCCAAGAAATTCAAGATTTTGATAGAAGGTGTCCTGGGACAAGGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036069.8 ENSMUST00000236349.2 |
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