Pregenerated sensors for MAJIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024786Ensembl transcript IDs: ENSMUST00000025699.9, ENSMUST00000113528.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCAGAAAGCGCCAGGCCATCCTGATAGAGCTGGAGTTGCAGGTTaGTTGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTGCACTA | + |
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Preference number: 1 (lower is better) Translates to: GQKAPGHPDRAGVAG*LPWVLRTKLRPSAL Trigger: TAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATGGCCTGGCGCTTTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CCA 90 bp | GCGCCAGGCCATCCTGATAGAGCTGGAGTTGCAGGTTGCTTGCCATaGGTACTGAGAACCAAACTCAGGCCCTCTGCACTATCAGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: APGHPDRAGVAGCLP*VLRTKLRPSALSVC Trigger: GCACACTGATAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATGGCCTGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR TCA 90 bp | GCCATCCTGATAGAGCTGGAGTTGCAGGTTGCTTGCCATGGGTACTaGGAACCAAACTCAGGCCCTCTGCACTATCAGTGTGCACTCAAC | + |
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Preference number: 1 (lower is better) Translates to: AILIELELQVACHGY*EPNSGPLHYQCALN Trigger: GTTGAGTGCACACTGATAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR GCA 90 bp | TGCAGGTTGCTTGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTaGACTATCAGTGTGCACTCAACTACCATCTCTCTAGCCTCGTTC | + |
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Preference number: 1 (lower is better) Translates to: CRLLAMGTENQTQAL*TISVHSTTISLASF Trigger: GAACGAGGCTAGAGAGATGGTAGTTGAGTGCACACTGATAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCACAGACTACATCTCTTCTATGCTaGCCCCTGCCCCACGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: GQEKRMARGSAPGAEAQTTSLLC*PLPHAC Trigger: GCACGCGTGGGGCAGGGGTCAGCATAGAAGAGATGT...AGTCTGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGTCAGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCCCTTCTGATGGCACGTGGGAGTaGACCGGGAGCAGAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: RLSGLAADALSSRLSGPSDGTWE*TGSRGT Trigger: TGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATC...AGAAGGGCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTCAGGCTGTCAGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCACATCTCTTCTATGCTaGCCCCTGCCCCACGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: ELRLSGLAADALSSRLSGTSLLC*PLPHAC Trigger: GCACGCGTGGGGCAGGGGTCAGCATAGAAGAGATGT...GCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCTGAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CAA 90 bp | CAGAAAGCGCCAGGCCATCCTGATAGAGCTGGAGTTGCAGGTTGCTaGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTGCACTATCA | + |
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Preference number: 2 (lower is better) Translates to: QKAPGHPDRAGVAGC*PWVLRTKLRPSALS Trigger: TGATAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATGGCCTGGCGCTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACTCAGGCCCTCTGCACTATCAGTGTGCACTCAACTACCATCTCTCTAGCCAGCAGAGGCACAGACTaGAGCCAGCCTGGGCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: QTQALCTISVHSTTISLASRGTD*SQPGLY Trigger: ATACAGCCCAGGCTGGCTTCAGTCTGTGCCTCTGCT...GGCTAGAGAGATGGTAGTTGAGTGCACACTGATAGTGCAGAGGGCCTGAGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTGCAGGGTTCTATGCTGACCCCTaGCCCACGCGTGCTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LALLSIVLSCSSDYEGAGFYADP*PTRAVV Trigger: GACCACAGCACGCGTGGGGCAGGGGTCAGCATAGAA...CCCTGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCCCTTCTTAGTATTGTTTTGTTGTGAGGACCCGGCCTaGTGCCCTTGTCCCCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GCRCFIKPPFWPFLVLFCCEDPA*CPCPRD Trigger: GTCACGGGGACAAGGGCACCAGGCCGGGTCCTCACA...ACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTTTATTCTGTGTGGGGCACATGCCATGGTGCACATACATGGAGGCTGAAGCTTGCCATGGGTACTaGGAACCAAACTCAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: YILFCVGHMPWCTYMEAEACHGY*EPNSGP Trigger: AGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGC...TTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACACAGAATAAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTGCTGGAGTTGCAGGTTaGTTGCCATGGGTACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: AFLALLSIVLSCSSDYEGAGVAG*LPWVLR Trigger: TCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGC...ACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTATCAAGCCGCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTTCGTTCTTACTGGTTTaGATAGGAAACACCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: CFIKPPFWPFLVLFCLALSFLLV*IGNTKG Trigger: GCCTTTGGTGTTTCCTATCCAAACCAGTAAGAACGA...AAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTTGATAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR GCA 72 bp | ATTACGAGGGTGCAGGGCGTGCGGGGCGTAAGTTTCTaGAGAGGCCAGAAAGCGCCAGGCCATCCTGATAGA | + |
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Preference number: 3 (lower is better) Translates to: ITRVQGVRGVSF*RGQKAPGHPDR Trigger: TCTATCAGGATGGCCTGGCGCTTTCTGGCCTCTGCAGAAACTTACGCCCCGCACGCCCTGCACCCTCGTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR GCA 72 bp | GCGCCAGGCCATCCTGATAGAGCTGGAGTTGCAGGTTaGTTGCCATGGGTACTGAGAACCAAACTCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: APGHPDRAGVAG*LPWVLRTKLRP Trigger: GGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATGGCCTGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR GCA 72 bp | GCCGCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTaGTCTTCCGATTACGAGGGTGCAGGGCGTGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: AAFLALLSIVLS*SSDYEGAGRAG Trigger: CCCCGCACGCCCTGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR TCA 72 bp | TGTGGGGCACATGCCATGGTGCACATACATGGAGGCTaGACTCAGGCTGTCAGGTCTGGCTGCAGATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: CGAHAMVHIHGG*TQAVRSGCRCF Trigger: AAAGCATCTGCAGCCAGACCTGACAGCCTGAGTTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CCA 72 bp | GCACATACATGGAGGCTGAACTCAGGCTGTCAGGTCTaGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: AHTWRLNSGCQV*LQMLYQAAFLA Trigger: GGCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCTGAGTTCAGCCTCCATGTATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CCA 72 bp | CATCCTGATAGAGCTGGAGTTGCAGGTTGCTTGCCATaGGTACTGAGAACCAAACTCAGGCCCTCTGCACTA | + |
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Preference number: 3 (lower is better) Translates to: HPDRAGVAGCLP*VLRTKLRPSAL Trigger: TAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR TCA 72 bp | ATAGAGCTGGAGTTGCAGGTTGCTTGCCATGGGTACTaGGAACCAAACTCAGGCCCTCTGCACTATCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: IELELQVACHGY*EPNSGPLHYQC Trigger: ACACTGATAGTGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR CAA 90 bp | TACATTTTATTCTGTGTGGGGCACATGCCATGGTGCACATACATGGAGGCTGAACTGATAGAGCTGGAGTaGCAGGTTGCTTGCCATGGG | + |
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Preference number: 3 (lower is better) Translates to: YILFCVGHMPWCTYMEAELIELE*QVACHG Trigger: CCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAG...TTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACACAGAATAAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR GCA 72 bp | AAGTACATTTTATTCTGTGTGGGGCACATGCCATGGTaGACATACATGGAGGCTGAACTCAGGCTGTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: KYILFCVGHMPW*TYMEAELRLSG Trigger: ACCTGACAGCCTGAGTTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACACAGAATAAAATGTACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CCA 72 bp | AGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTTCTaGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: RSGCRCFIKPPF*PFLVLFCLALP Trigger: CGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR-3UTR CAA 90 bp | TACATTTTATTCTGTGTGGGGCACATGCCATGGTGCACATACATGGAGGCTGAATGGCCCTTCTTAGTATaGTTTTGTCTTGCTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: YILFCVGHMPWCTYMEAEWPFLV*FCLALP Trigger: CGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCA...TTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACACAGAATAAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CCA 72 bp | TCAACTACCATCTCTCTAGCCTCGTTCTTACTGGTTTaGATAGGAAACACCAAAGGCAAACAAGAGGATAAA | + |
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Preference number: 3 (lower is better) Translates to: STTISLASFLLV*IGNTKGKQEDK Trigger: TTTATCCTCTTGTTTGCCTTTGGTGTTTCCTATCCAAACCAGTAAGAACGAGGCTAGAGAGATGGTAGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | GAACTCAGGCTGTCAGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCGCCCTGTGTGGCCCCTaGCTGCTAGGGGAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ELRLSGLAADALSSRLSGALCGP*LLGELG Trigger: GCCCAGCTCCCCTAGCAGGCAGGGGCCACACAGGGC...GCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCTGAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | AGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCACAGACTGAAGTGGCTCTTTCGGGGGTaGTGGACTGCTATGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RRKGWHVGVHREQRHRLKWLFRG*WTAMLQ Trigger: CTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCA...CTTCAGTCTGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR TCA 90 bp | GGTCAGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCACAGACTACATTGGGTCCTGCATaGAGGAACCTTGTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GQEKRMARGSAPGAEAQTTLGPA*RNLVSG Trigger: TCCAGAGACAAGGTTCCTTCATGCAGGACCCAATGT...AGTCTGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCAGGTTGCTTGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTGCAGAAGCTGGGGTGTCCTaGTATTCCTGCTGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GVAGCLPWVLRTKLRPSAEAGVS*YSCWAS Trigger: AGAAGCCCAGCAGGAATATCAGGACACCCCAGCTTC...TGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | GGGTCAGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCACAGACAATGGCATTAGAAGCTaGGGTGTCCTGATATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GSGEKDGTWECTGSRGTDNGIRS*GVLIFL Trigger: CAGGAATATCAGGACACCCCAGCTTCTAATGCCATT...GTCTGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CAA 72 bp | CCAGGCCATCCTGATAGAGCTGGAGTTGCAGGTTGCTaGCCATGGGTACTGAGAACCAAACTCAGGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGHPDRAGVAGC*PWVLRTKLRPS Trigger: AGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCCAGCTCTATCAGGATGGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | GGAGTTGCAGGTTGCTTGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTGCAGTGCTCTCCAGCTCCTaGACGATGACTTCCTTATCC | + |
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Preference number: 4 (lower is better) Translates to: GVAGCLPWVLRTKLRPSAVLSSS*TMTSLS Trigger: GGATAAGGAAGTCATCGTCCAGGAGCTGGAGAGCAC...TGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025699.9 |
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| CDS-3UTR CCA 90 bp | AGAACCAAACTCAGGCCCTCTGCACTATCAGTGTGCACTCAACTACCATCTCTCACCCCAAGAAGCCTCTaGCTCCTGGCTCTTTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RTKLRPSALSVCTQLPSLTPRSL*LLALSG Trigger: CCCCGAAAGAGCCAGGAGCCAGAGGCTTCTTGGGGT...GAGAGATGGTAGTTGAGTGCACACTGATAGTGCAGAGGGCCTGAGTTTGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR TCA 90 bp | GGAGTTGCAGGTTGCTTGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTGCAACATTGGGTCCTGCATaGAGGAACCTTGTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GVAGCLPWVLRTKLRPSATLGPA*RNLVSG Trigger: TCCAGAGACAAGGTTCCTTCATGCAGGACCCAATGT...TGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGTCAGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCCCTTCTCCAGCTCCTGGACGATaGCTTCCTTATCCTCTATTT | + |
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Preference number: 4 (lower is better) Translates to: RLSGLAADALSSRLSGPSPAPGR*LPYPLF Trigger: AAATAGAGGATAAGGAAGTCATCGTCCAGGAGCTGG...AGAAGGGCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | CTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTGCAGGGGGGCTTCTTCGTCCGTaGTCCTCTTGCTCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LALLSIVLSCSSDYEGAGGLLRP*SSCSPS Trigger: TGAAGGAGAGCAAGAGGAGCACGGACGAAGAAGCCC...CCCTGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | GGAGTTGCAGGTTGCTTGCCATGGGTACTGAGAACCAAACTCAGGCCCTCTGCAATACACATTGGGTCCTaGATGAAGGAACCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GVAGCLPWVLRTKLRPSAIHIGS*MKEPCL Trigger: GAGACAAGGTTCCTTCATGCAGGACCCAATGTGTAT...TGCAGAGGGCCTGAGTTTGGTTCTCAGTACCCATGGCAAGCAACCTGCAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGAGAGGTGTGGTAGCTCCGGGGAGTTACTGCAGGAGGACATCTCTTCTAATACACATTGGGTCCTaGATGAAGGAACCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SKRGVVAPGSYCRRTSLLIHIGS*MKEPCL Trigger: GAGACAAGGTTCCTTCATGCAGGACCCAATGTGTAT...TAGAAGAGATGTCCTCCTGCAGTAACTCCCCGGAGCTACCACACCTCTCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | ATGCTTTATCAAGCCGCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTACCCCAAGAAGCCTCTaGCTCCTGGCTCTTTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: MLYQAAFLALLSIVLSCSTPRSL*LLALSG Trigger: CCCCGAAAGAGCCAGGAGCCAGAGGCTTCTTGGGGT...AGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTTGATAAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| 3UTR CAA 72 bp | TATCAAGCCGCCTTTCTGGCCCTTCTTAGTATTGTTTaGTCTTGCTCTTCCGATTACGAGGGTGCAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: YQAAFLALLSIV*SCSSDYEGAGR Trigger: ACGCCCTGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | GCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTGGTGGACTGCTATGTTaGAGTGGAGGGACAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: AFLALLSIVLSCSSDYEGGGLLC*SGGTTN Trigger: GTTGGTTGTCCCTCCACTGCAACATAGCAGTCCACC...ACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTGCATGGCTCTTTCGGGGGTaGTGGACTGCTATGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FLALLSIVLSCSSDYEGAWLFRG*WTAMLQ Trigger: CTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCA...TGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTGCAGGTGGACTGCTATGTTaGAGTGGAGGGACAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: FLALLSIVLSCSSDYEGAGGLLC*SGGTTN Trigger: GTTGGTTGTCCCTCCACTGCAACATAGCAGTCCACC...TGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR TCA 90 bp | TACATTTTATTCTGTGTGGGGCACATGCCATGGTGCACATACATGGAGGCTGAACCAGCTCCTGGACGATaGCTTCCTTATCCTCTATTT | + |
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Preference number: 4 (lower is better) Translates to: YILFCVGHMPWCTYMEAEPAPGR*LPYPLF Trigger: AAATAGAGGATAAGGAAGTCATCGTCCAGGAGCTGG...TTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACACAGAATAAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | TATCAGTGTGCACTCAACTACCATCTCTCTAGCCTCGTTCTTACTGGTTTGGATGAATCCTCCAGCTCCTaGACGATGACTTCCTTATCC | + |
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Preference number: 4 (lower is better) Translates to: YQCALNYHLSSLVLTGLDESSSS*TMTSLS Trigger: GGATAAGGAAGTCATCGTCCAGGAGCTGGAGGATTC...ATCCAAACCAGTAAGAACGAGGCTAGAGAGATGGTAGTTGAGTGCACACTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| 3UTR CAA 72 bp | TGCTTTATCAAGCCGCCTTTCTGGCCCTTCTTAGTATaGTTTTGTCTTGCTCTTCCGATTACGAGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CFIKPPFWPFLV*FCLALPITRVQ Trigger: CTGCACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTTGATAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGAGGGTAATGGCATTAGAAGCTaGGGTGTCCTGATATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AFLALLSIVLSCSSDYEGNGIRS*GVLIFL Trigger: CAGGAATATCAGGACACCCCAGCTTCTAATGCCATT...ACCCTCGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS-3UTR GCA 90 bp | TATCAGTGTGCACTCAACTACCATCTCTCTAGCCTCGTTCTTACTGGTTTGGATAAACTCTCTCCCACTTaGTTTTATAGGGAAATACAA | + |
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Preference number: 4 (lower is better) Translates to: YQCALNYHLSSLVLTGLDKLSPT*FYREIQ Trigger: TTGTATTTCCCTATAAAAGCAAGTGGGAGAGAGTTT...ATCCAAACCAGTAAGAACGAGGCTAGAGAGATGGTAGTTGAGTGCACACTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | GACCGGGGTCAGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCATCGTCCGTGCTCCTCTaGCTCTCCTTCAGAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: DRGQEKRMARGSAPGAEASSVLL*LSFRGF Trigger: GAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGACGA...TGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCTGACCCCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CCA 90 bp | TCTGGCTCCTGGCTCTTTCGGGGGTGGTGGACTGCTATGTTGCAGTaGAGGGACAACCAACCCTTGCAGGCCATGCCCCAACGCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: SGSWLFRGWWTAMLQ*RDNQPLQAMPQRSI Trigger: GATGCTGCGTTGGGGCATGGCCTGCAAGGGTTGGTTGTCCCTCCACTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCAGGAGCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CCA 90 bp | AGTACCGGAACGGGAAGAGAGCACTTAGAAACCCCAAGAAGCCTCTaGCTCCTGGCTCTTTCGGGGGTGGTGGACTGCTATGTTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: STGTGREHLETPRSL*LLALSGVVDCYVAV Trigger: CACTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCAGGAGCCAGAGGCTTCTTGGGGTTTCTAAGTGCTCTCTTCCCGTTCCGGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CCA 90 bp | CCCCAACGCAGCATCCTGTTCCTTGACAGCAATGGCATTAGAAGCTaGGGTGTCCTGATATTCCTGCTGGGCTTCTTCGTCCGTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PQRSILFLDSNGIRS*GVLIFLLGFFVRAL Trigger: GAGAGCACGGACGAAGAAGCCCAGCAGGAATATCAGGACACCCCAGCTTCTAATGCCATTGCTGTCAAGGAACAGGATGCTGCGTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025699.9 |
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| CDS CCA 90 bp | CCCCAACGCAGCATCCTGTTCCTTGACAGCAATGGCATTAGAAGCTaGGGTGTCCTGATATTCCTGCTGGGCTTCTTCGTCCGTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PQRSILFLDSNGIRS*GVLIFLLGFFVRAP Trigger: AGGAGCACGGACGAAGAAGCCCAGCAGGAATATCAGGACACCCCAGCTTCTAATGCCATTGCTGTCAAGGAACAGGATGCTGCGTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCACAGACTTTCTGTAACAAAGGGTaGCAGGCTGTCCATGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: GQEKRMARGSAPGAEAQTFCNKG*QAVHVC Trigger: GCAAACATGGACAGCCTGCAACCCTTTGTTACAGAA...AGTCTGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGGAGAAAAGGATGGCACGTGGGAGTGCACCGGGAGCAGAGGCACAGACTTCCTTCAGAGGCTTCTaGTTGCTGGAAGCTTCACTA | + |
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Preference number: 5 (lower is better) Translates to: GQEKRMARGSAPGAEAQTSFRGF*LLEASL Trigger: TAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAAGGA...AGTCTGTGCCTCTGCTCCCGGTGCACTCCCACGTGCCATCCTTTTCTCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | GAGGCTGAACTCAGGCTGTCAGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTGTTTCCATTTCCTCATaGTGGCTTCTTCTGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EAELRLSGLAADALSSRLVSISS*WLLLLP Trigger: CGGAAGCAGAAGAAGCCACAATGAGGAAATGGAAAC...AAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCTGAGTTCAGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | TACATTTTATTCTGTGTGGGGCACATGCCATGGTGCACATACATGGAGGCTGAACTAGAAGTCTCCATCTaGGCCCTGTGTGGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YILFCVGHMPWCTYMEAELEVSI*ALCGPC Trigger: GCAGGGGCCACACAGGGCCAAGATGGAGACTTCTAG...TTCAGCCTCCATGTATGTGCACCATGGCATGTGCCCCACACAGAATAAAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | CAAACTCAGGCCCTCTGCACTATCAGTGTGCACTCAACTACCATCTCTCTAGCCCTGCATGAAGGAACCTaGTCTCTGGAAATGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTQALCTISVHSTTISLALHEGT*SLEMGR Trigger: CCTACCCATTTCCAGAGACAAGGTTCCTTCATGCAG...GGCTAGAGAGATGGTAGTTGAGTGCACACTGATAGTGCAGAGGGCCTGAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS GCA 90 bp | GTGTTCTGTAACAAAGGGTTGCAGGCTGTCCATGTTTGCCAAGACTaGACGGATAGAATCCTCCAGCTCCTGGACGATGACTTCCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: VFCNKGLQAVHVCQD*TDRILQLLDDDFLI Trigger: GATAAGGAAGTCATCGTCCAGGAGCTGGAGGATTCTATCCGTGCAGTCTTGGCAAACATGGACAGCCTGCAACCCTTTGTTACAGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | AGAACCAAACTCAGGCCCTCTGCACTATCAGTGTGCACTCAACTACCATCTCTCCTGCATGAAGGAACCTaGTCTCTGGAAATGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTKLRPSALSVCTQLPSLLHEGT*SLEMGR Trigger: CCTACCCATTTCCAGAGACAAGGTTCCTTCATGCAG...GAGAGATGGTAGTTGAGTGCACACTGATAGTGCAGAGGGCCTGAGTTTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS GCA 90 bp | TACAATGAAGTGTTCTGTAACAAAGGGTTGCAGGCTGTCCATGTTTaGCAAGACTGCACGGATAGAATCCTCCAGCTCCTGGACGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: YNEVFCNKGLQAVHV*QDCTDRILQLLDDD Trigger: GTCATCGTCCAGGAGCTGGAGGATTCTATCCGTGCAGTCTTGGCAAACATGGACAGCCTGCAACCCTTTGTTACAGAACACTTCATTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | GAACTCAGGCTGTCAGGTCTGGCTGCAGATGCTTTATCAAGCCGCCTTTCTGGCTCTCCTCTGATACTGTaGCCATATCTGATTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ELRLSGLAADALSSRLSGSPLIL*PYLILN Trigger: GTTCAAAATCAGATATGGCAACAGTATCAGAGGAGA...GCCAGAAAGGCGGCTTGATAAAGCATCTGCAGCCAGACCTGACAGCCTGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CCA 90 bp | CTGTCCATGTTTGCCAAGACTGCACGGATAGAATCCTCCAGCTCCTaGACGATGACTTCCTTATCCTCTATTTCTTCTCCTCTGATACTG | + |
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Preference number: 5 (lower is better) Translates to: LSMFAKTARIESSSS*TMTSLSSISSPLIL Trigger: CAGTATCAGAGGAGAAGAAATAGAGGATAAGGAAGTCATCGTCCAGGAGCTGGAGGATTCTATCCGTGCAGTCTTGGCAAACATGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS-3UTR CAA 90 bp | AAGCCGCCTTTCTGGCCCTTCTTAGTATTGTTTTGTCTTGCTCTTCCGATTACGTTCAGAGGCTTCTTGTaGCTGGAAGCTTCACTAGAA | + |
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Preference number: 5 (lower is better) Translates to: KPPFWPFLVLFCLALPITFRGFL*LEASLE Trigger: TTCTAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAA...CGTAATCGGAAGAGCAAGACAAAACAATACTAAGAAGGGCCAGAAAGGCGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS GCA 90 bp | GATACTGTTGCCATATCTGATTTTGAACTTATACACATTGGGTCCTaGATGAAGGAACCTTGTCTCTGGAAATGGGTAGGTGAATGGTTT | + |
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Preference number: 5 (lower is better) Translates to: DTVAISDFELIHIGS*MKEPCLWKWVGEWF Trigger: AAACCATTCACCTACCCATTTCCAGAGACAAGGTTCCTTCATGCAGGACCCAATGTGTATAAGTTCAAAATCAGATATGGCAACAGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS GCA 72 bp | GCTCCTGGCTCTTTCGGGGGTGGTGGACTGCTATGTTaGAGTGGAGGGACAACCAACCCTTGCAGGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: APGSFGGGGLLC*SGGTTNPCRPC Trigger: GCATGGCCTGCAAGGGTTGGTTGTCCCTCCACTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCAGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CAA 72 bp | GGCTCCTGGCTCTTTCGGGGGTGGTGGACTGCTATGTaGCAGTGGAGGGACAACCAACCCTTGCAGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: GSWLFRGWWTAM*QWRDNQPLQAM Trigger: CATGGCCTGCAAGGGTTGGTTGTCCCTCCACTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCAGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CCA 72 bp | TGGCTCTTTCGGGGGTGGTGGACTGCTATGTTGCAGTaGAGGGACAACCAACCCTTGCAGGCCATGCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: WLFRGWWTAMLQ*RDNQPLQAMPQ Trigger: TTGGGGCATGGCCTGCAAGGGTTGGTTGTCCCTCCACTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CCA 72 bp | CCCCAAGAAGCCTCTGGCTCCTGGCTCTTTCGGGGGTaGTGGACTGCTATGTTGCAGTGGAGGGACAACCAA | + |
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Preference number: 6 (lower is better) Translates to: PQEASGSWLFRG*WTAMLQWRDNQ Trigger: TTGGTTGTCCCTCCACTGCAACATAGCAGTCCACCACCCCCGAAAGAGCCAGGAGCCAGAGGCTTCTTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CAA 90 bp | TTCAGAGGCTTCTTGTTGCTGGAAGCTTCACTAGAAGTCTCCATCTaGGCCCTGTGTGGCCCCTGCCTGCTAGGGGAGCTGGGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FRGFLLLEASLEVSI*ALCGPCLLGELGSS Trigger: GGAGGAGCCCAGCTCCCCTAGCAGGCAGGGGCCACACAGGGCCAAGATGGAGACTTCTAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS GCA 72 bp | TGTTGCAGTGGAGGGACAACCAACCCTTGCAGGCCATaGCCCAACGCAGCATCCTGTTCCTTGACAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: CCSGGTTNPCRP*PNAASCSLTAM Trigger: CATTGCTGTCAAGGAACAGGATGCTGCGTTGGGGCATGGCCTGCAAGGGTTGGTTGTCCCTCCACTGCAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CCA 72 bp | ACGGGAAGAGAGCACTTAGAAACCCCAAGAAGCCTCTaGCTCCTGGCTCTTTCGGGGGTGGTGGACTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TGREHLETPRSL*LLALSGVVDCY Trigger: ATAGCAGTCCACCACCCCCGAAAGAGCCAGGAGCCAGAGGCTTCTTGGGGTTTCTAAGTGCTCTCTTCCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CAA 72 bp | TTCTTGTTGCTGGAAGCTTCACTAGAAGTCTCCATCTaGGCCCTGTGTGGCCCCTGCCTGCTAGGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLLLEASLEVSI*ALCGPCLLGEL Trigger: CAGCTCCCCTAGCAGGCAGGGGCCACACAGGGCCAAGATGGAGACTTCTAGTGAAGCTTCCAGCAACAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS GCA 72 bp | GGGTGTCCTGATATTCCTGCTGGGCTTCTTCGTCCGTaGTCCTCTTGCTCTCCTTCAGAGGCTTCTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCPDIPAGLLRP*SSCSPSEASCC Trigger: GCAACAAGAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGACGAAGAAGCCCAGCAGGAATATCAGGACACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CAA 90 bp | GCTTCTTCGTCCGTGCTCCTCTTGCTCTCCTTCAGAGGCTTCTTGTaGCTGGAAGCTTCACTAGAAGTCTCCATCTTGGCCCTGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSVLLLLSFRGFL*LEASLEVSILALCG Trigger: GCCACACAGGGCCAAGATGGAGACTTCTAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGACGAAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS TCA 72 bp | TCCTTGACAGCAATGGCATTAGAAGCTGGGGTGTCCTaGTATTCCTGCTGGGCTTCTTCGTCCGTGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLTAMALEAGVS*YSCWASSSVLS Trigger: GGAGAGCACGGACGAAGAAGCCCAGCAGGAATATCAGGACACCCCAGCTTCTAATGCCATTGCTGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025699.9 |
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| CDS TCA 72 bp | TCCTTGACAGCAATGGCATTAGAAGCTGGGGTGTCCTaGTATTCCTGCTGGGCTTCTTCGTCCGTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLTAMALEAGVS*YSCWASSSVLL Trigger: GAGGAGCACGGACGAAGAAGCCCAGCAGGAATATCAGGACACCCCAGCTTCTAATGCCATTGCTGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CAA 90 bp | TGGGCTTCTTCGTCCGTGCTCCTCTTGCTCTCCTTCAGAGGCTTCTaGTTGCTGGAAGCTTCACTAGAAGTCTCCATCTTGGCCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: WASSSVLLLLSFRGF*LLEASLEVSILALC Trigger: ACACAGGGCCAAGATGGAGACTTCTAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGACGAAGAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS GCA 72 bp | GATATTCCTGCTGGGCTTCTTCGTCCGTGCTCCTCTTaGTCTCCTTCAGAGGCTTCTTGTTGCTGGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DIPAGLLRPCSS*SPSEASCCWKL Trigger: AAGCTTCCAGCAACAAGAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGACGAAGAAGCCCAGCAGGAATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CAA 72 bp | TCCGTGCTCCTCTTGCTCTCCTTCAGAGGCTTCTTGTaGCTGGAAGCTTCACTAGAAGTCTCCATCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVLLLLSFRGFL*LEASLEVSILA Trigger: GGCCAAGATGGAGACTTCTAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CCA 72 bp | AGCATCCTGTTCCTTGACAGCAATGGCATTAGAAGCTaGGGTGTCCTGATATTCCTGCTGGGCTTCTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SILFLDSNGIRS*GVLIFLLGFFV Trigger: GACGAAGAAGCCCAGCAGGAATATCAGGACACCCCAGCTTCTAATGCCATTGCTGTCAAGGAACAGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025699.9 ENSMUST00000113528.2 |
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| CDS CAA 72 bp | TCGTCCGTGCTCCTCTTGCTCTCCTTCAGAGGCTTCTaGTTGCTGGAAGCTTCACTAGAAGTCTCCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSVLLLLSFRGF*LLEASLEVSIL Trigger: CAAGATGGAGACTTCTAGTGAAGCTTCCAGCAACAAGAAGCCTCTGAAGGAGAGCAAGAGGAGCACGGACGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CCA 72 bp | TTTGCCAAGACTGCACGGATAGAATCCTCCAGCTCCTaGACGATGACTTCCTTATCCTCTATTTCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FAKTARIESSSS*TMTSLSSISSP Trigger: AGGAGAAGAAATAGAGGATAAGGAAGTCATCGTCCAGGAGCTGGAGGATTCTATCCGTGCAGTCTTGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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| CDS CAA 90 bp | CTTGCTTTTATAGGGAAATACAATGAAGTGTTCTGTAACAAAGGGTaGCAGGCTGTCCATGTTTGCCAAGACTGCACGGATAGAATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAFIGKYNEVFCNKG*QAVHVCQDCTDRIL Trigger: GAGGATTCTATCCGTGCAGTCTTGGCAAACATGGACAGCCTGCAACCCTTTGTTACAGAACACTTCATTGTATTTCCCTATAAAAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113528.2 |
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