Pregenerated sensors for MAIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025971Ensembl transcript IDs: ENSMUST00000027114.6
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAAGAAGGCCATCACCAGATGCAGCCACTTGTACCTGAAGAACTaGCCCAAAAATAAAGCCAGAGGACACACACACCCAGTGTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: SKKAITRCSHLYLKN*PKNKARGHTHPVWL Trigger: TAACCACACTGGGTGTGTGTGTCCTCTGGCTTTATTTTTGGGTCAGTTCTTCAGGTACAAGTGGCTGCATCTGGTGATGGCCTTCTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CCA 90 bp | CTAGGCTGGCTCCATTTCATCACTACTGTGAACAGTAAACAAACATaGATGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LGWLHFITTVNSKQT*MSYRGQAAMVLPSP Trigger: AGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTTGTTTACTGTTCACAGTAGTGATGAAATGGAGCCAGCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CCA 90 bp | TGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCTaGATCACTATCCAGATAATCAAACATACTAGGCTCAGTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: CPTEVKLLWFYPVLI*ITIQIIKHTRLSGL Trigger: CAAGCCACTGAGCCTAGTATGTTTGATTATCTGGATAGTGATCCAGATAAGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 90 bp | ACAGAAGGCAGCCAGAGCAGAAAGCTGAGAGATCATTTTCAAACATaGAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TEGSQSRKLRDHFQT*KRESQKWNDVRNSQ Trigger: CTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATGTTTGAAAATGATCTCTCAGCTTTCTGCTCTGGCTGCCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 90 bp | ACTGTGTTTATGTGCCACATTTTCTTCATGTATTCTAGTGCTTGCTaGTGGACATCTAGGCTGGCTCCATTTCATCACTACTGTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: TVFMCHIFFMYSSAC*WTSRLAPFHHYCEQ Trigger: CTGTTCACAGTAGTGATGAAATGGAGCCAGCCTAGATGTCCATCAGCAAGCACTAGAATACATGAAGAAAATGTGGCACATAAACACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR GCA 90 bp | CACTATTCAGCTGTAAGGGTTACTTATGCATTCTGGTTATGCCTTTaGAAGATACACACATTTCCTCACAACCTGTCTTTCAGAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: HYSAVRVTYAFWLCL*KIHTFPHNLSFREQ Trigger: TTGCTCTCTGAAAGACAGGTTGTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAATGCATAAGTAACCCTTACAGCTGAATAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR GCA 90 bp | GCATGTCACTATTCAGCTGTAAGGGTTACTTATGCATTCTGGTTATaGCTTTGCAAGATACACACATTTCCTCACAACCTGTCTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: ACHYSAVRVTYAFWL*LCKIHTFPHNLSFR Trigger: TCTGAAAGACAGGTTGTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAATGCATAAGTAACCCTTACAGCTGAATAGTGACATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CCA 90 bp | ACATTTTCTTCATGTATTCTAGTGCTTGCTGATGGACATCTAGGCTaGCTCCATTTCATCACTACTGTGAACAGTAAACAAACATGGATG | + |
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Preference number: 1 (lower is better) Translates to: TFSSCILVLADGHLG*LHFITTVNSKQTWM Trigger: CATCCATGTTTGTTTACTGTTCACAGTAGTGATGAAATGGAGCCAGCCTAGATGTCCATCAGCAAGCACTAGAATACATGAAGAAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 90 bp | AAGTTTAGACTCCACAATATAAGCTATGCAATCACTGTCTACGTCTaGCTCATTTCACTTAACAGATTTATCTCCAGCTCATTCACTTTC | + |
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Preference number: 1 (lower is better) Translates to: KFRLHNISYAITVYV*LISLNRFISSSFTF Trigger: GAAAGTGAATGAGCTGGAGATAAATCTGTTAAGTGAAATGAGTCAGACGTAGACAGTGATTGCATAGCTTATATTGTGGAGTCTAAACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR TCA 90 bp | GACCCAAAAATAAAGCCAGAGGACACACACACCCAGTGTGGTTATGCAATTGACAGAGCAATTTCACCTTaGTTGAGACTTTCCTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: DPKIKPEDTHTQCGYAIDRAISP*LRLSCL Trigger: TAAGCAGGAAAGTCTCAATCAAGGTGAAATTGCTCT...GTCAATTGCATAACCACACTGGGTGTGTGTGTCCTCTGGCTTTATTTTTGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | AAACATGGATGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCAGGACACCAATGTGGTaGTGTAGTTTTGTGTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: KHGCPTEVKLLWFYPVLIRTPMW*CSFVFY Trigger: GTAAAACACAAAACTACAGCACCACATTGGTGTCCT...GATAAGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | TTCAAACATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGACTTATGATTACTGTCTaGACCCCTCCCCTCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FKHERERARSGMMLETLRLMITV*TPPLLL Trigger: GAGAAGGAGGGGAGGGGTGCAGACAGTAATCATAAG...TCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGTTATGCCTTTGCAAGATACACACATTTCCTCACAACCTGTCTTTCAGAGAGGTCAAGCTGCTATaGTTCTACCCAGTCCTTATC | + |
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Preference number: 2 (lower is better) Translates to: FWLCLCKIHTFPHNLSFREVKLL*FYPVLI Trigger: GATAAGGACTGGGTAGAACCATAGCAGCTTGACCTC...TCTGAAAGACAGGTTGTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | AATTTCACCTTGATTGAGACTTTCCTGCTTATGATTACTGTCTGCACCCCTCCCCCACAATATAAGCTATaGAATCACTGTCTACGTCTG | + |
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Preference number: 2 (lower is better) Translates to: NFTLIETFLLMITVCTPPPQYKL*NHCLRL Trigger: CAGACGTAGACAGTGATTGCATAGCTTATATTGTGG...GGGAGGGGTGCAGACAGTAATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGTCTTCACAAGGCCATCACCAGATaGAGCCACTTGTACCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: FLPSYEQYTQTPVTLSLHKAITR*SHLYLK Trigger: CTTCAGGTACAAGTGGCTGCATCTGGTGATGGCCTT...GTGAAGACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CCA 90 bp | AATTTCACCTTGATTGAGACTTTCCTGCTTATGATTACTGTCTGCACCCCTCCCAACAGTAAACAAACATaGATGTCCTACAGAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: NFTLIETFLLMITVCTPPNSKQT*MSYRGQ Trigger: TTGACCTCTGTAGGACATCCATGTTTGTTTACTGTT...GGGAGGGGTGCAGACAGTAATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CCA 90 bp | CATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGAGCCGGTGTTACTTATGCATTCTaGTTATGCCTTTGCAAGATA | + |
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Preference number: 2 (lower is better) Translates to: HERERARSGMMLETLRAGVTYAF*LCLCKI Trigger: TATCTTGCAAAGGCATAACCAGAATGCATAAGTAAC...ACCGGCTCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CAA 90 bp | TCTAAGGTTCGGCATCTCCCTTTGTTCATACCTTTCCAAATGTCATaGACTGGGGATAAGTGTTTAGTACATGAACCTATACAGGATATT | + |
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Preference number: 2 (lower is better) Translates to: SKVRHLPLFIPFQMS*TGDKCLVHEPIQDI Trigger: AATATCCTGTATAGGTTCATGTACTAAACACTTATCCCCAGTCAATGACATTTGGAAAGGTATGAACAAAGGGAGATGCCGAACCTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR TCA 90 bp | TTCAAACATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGATTGTACCTGAAGAACTaGCCCAAAAATAAAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: FKHERERARSGMMLETLRLYLKN*PKNKAR Trigger: TCTGGCTTTATTTTTGGGTCAGTTCTTCAGGTACAA...TCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATGTTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CAA 90 bp | AAGAAGAAGCTACCAAACTCTTTTCCAAAGTGCCTGCACTATTTTTaGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: KKKLPNSFPKCLHYF*PSYEQYTQTPVTLS Trigger: ACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAAATAGTGCAGGCACTTTGGAAAAGAGTTTGGTAGCTTCTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGTCTTCACTATAAAACATTTGAATaGCACTCAGCAGGACACCAA | + |
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Preference number: 2 (lower is better) Translates to: FLPSYEQYTQTPVTLSLHYKTFE*HSAGHQ Trigger: TTGGTGTCCTGCTGAGTGTCATTCAAATGTTTTATA...GTGAAGACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAGATGACTGGGGTACAGCTATATTAATTAGTGTTATGAAGCAATTGACTCAATTTCACCTTGATTaGGACTTTCCTGCTTATGAT | + |
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Preference number: 2 (lower is better) Translates to: IPDDWGTAILISVMKQLTQFHLD*DFPAYD Trigger: ATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATTG...AGTCAATTGCTTCATAACACTAATTAATATAGCTGTACCCCAGTCATCTGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | ATTCCAGATGACTGGGGTACAGCTATATTAATTAGTGTTATGAAGCAATTGACTCCCACTGTGTTTATGTaGCACATTTTCTTCATGTAT | + |
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Preference number: 2 (lower is better) Translates to: IPDDWGTAILISVMKQLTPTVFM*HIFFMY Trigger: ATACATGAAGAAAATGTGGCACATAAACACAGTGGG...AGTCAATTGCTTCATAACACTAATTAATATAGCTGTACCCCAGTCATCTGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGTCTTCACTATGCATTCTGGTTATaGCTTTGCAAGATACACACA | + |
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Preference number: 2 (lower is better) Translates to: FLPSYEQYTQTPVTLSLHYAFWL*LCKIHT Trigger: TGTGTGTATCTTGCAAAGGCATAACCAGAATGCATA...GTGAAGACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGTCTTCACTGTAAGGGTTACTTATaGATTCTGGTTATGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: FLPSYEQYTQTPVTLSLHCKGYL*ILVMPL Trigger: CAAAGGCATAACCAGAATGCATAAGTAACCCTTACA...GTGAAGACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 72 bp | TGGAATGATGTTAGAAACTCTCAGAGCCGGTCCAGGTaGTGGCCTTCCTCTAAGGTTCGGCATCTCCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: WNDVRNSQSRSR*WPSSKVRHLPL Trigger: CAAAGGGAGATGCCGAACCTTAGAGGAAGGCCATCACCTGGACCGGCTCTGAGAGTTTCTAACATCATTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 72 bp | GCCATCACCAGATGCAGCCACTTGTACCTGAAGAACTaGCCCAAAAATAAAGCCAGAGGACACACACACCCA | + |
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Preference number: 3 (lower is better) Translates to: AITRCSHLYLKN*PKNKARGHTHP Trigger: TGGGTGTGTGTGTCCTCTGGCTTTATTTTTGGGTCAGTTCTTCAGGTACAAGTGGCTGCATCTGGTGATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 72 bp | CTAAGAAGGCCATCACCAGATGCAGCCACTTGTACCTaGAGAACTGACCCAAAAATAAAGCCAGAGGACACA | + |
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Preference number: 3 (lower is better) Translates to: LRRPSPDAATCT*RTDPKIKPEDT Trigger: TGTGTCCTCTGGCTTTATTTTTGGGTCAGTTCTTCAGGTACAAGTGGCTGCATCTGGTGATGGCCTTCTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CCA 72 bp | GAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCTaGATCACTATCCAGATAATCAAACATACTAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: EVKLLWFYPVLI*ITIQIIKHTRL Trigger: GAGCCTAGTATGTTTGATTATCTGGATAGTGATCCAGATAAGGACTGGGTAGAACCATAGCAGCTTGACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CAA 90 bp | TGGCTTACAGTTTCAGAGGGAGTCCATAATGGTATGTGTGTTGGGAGAGGGAAGCTAGAATCTCTACTTTaGGCTTTTAAGTCCATTGTC | + |
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Preference number: 3 (lower is better) Translates to: WLTVSEGVHNGMCVGRGKLESLL*AFKSIV Trigger: GACAATGGACTTAAAAGCCAAAAGTAGAGATTCTAG...CTTCCCTCTCCCAACACACATACCATTATGGACTCCCTCTGAAACTGTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 72 bp | ATGTGCCACATTTTCTTCATGTATTCTAGTGCTTGCTaGTGGACATCTAGGCTGGCTCCATTTCATCACTAC | + |
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Preference number: 3 (lower is better) Translates to: MCHIFFMYSSAC*WTSRLAPFHHY Trigger: GTAGTGATGAAATGGAGCCAGCCTAGATGTCCATCAGCAAGCACTAGAATACATGAAGAAAATGTGGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CAA 90 bp | GACCCAAAAATAAAGCCAGAGGACACACACACCCAGTGTGGTTATGCAATTGACTGGCTTGTAGAAATCTaGCAGAAACTTGGATCATTA | + |
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Preference number: 3 (lower is better) Translates to: DPKIKPEDTHTQCGYAIDWLVEI*QKLGSL Trigger: TAATGATCCAAGTTTCTGCAAGATTTCTACAAGCCA...GTCAATTGCATAACCACACTGGGTGTGTGTGTCCTCTGGCTTTATTTTTGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CAA 90 bp | CATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGAGCCGGTACCTATACAGGATATTaGTCATTCAAACTACCAGAG | + |
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Preference number: 3 (lower is better) Translates to: HERERARSGMMLETLRAGTYTGY*SFKLPE Trigger: CTCTGGTAGTTTGAATGACAAATATCCTGTATAGGT...ACCGGCTCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR TCA 72 bp | CTAGTCTGTGACACATGTTCATATAAAACATTTGAATaGCACTCAGCAGGACACCAATGTGGTGCTGTCGTT | + |
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Preference number: 3 (lower is better) Translates to: LVCDTCSYKTFE*HSAGHQCGAVV Trigger: AACGACAGCACCACATTGGTGTCCTGCTGAGTGTCATTCAAATGTTTTATATGAACATGTGTCACAGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR GCA 72 bp | GCTGTAAGGGTTACTTATGCATTCTGGTTATGCCTTTaGAAGATACACACATTTCCTCACAACCTGTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: AVRVTYAFWLCL*KIHTFPHNLSF Trigger: GAAAGACAGGTTGTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAATGCATAAGTAACCCTTACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CCA 72 bp | CTCCATTTCATCACTACTGTGAACAGTAAACAAACATaGATGTCCTACAGAGGTCAAGCTGCTATGGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LHFITTVNSKQT*MSYRGQAAMVL Trigger: TAGAACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTTGTTTACTGTTCACAGTAGTGATGAAATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CAA 90 bp | TTCAAACATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGATTGGTATCAGTTTTGTaGGTTGGCACGTGGTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: FKHERERARSGMMLETLRLVSVL*VGTWSE Trigger: TTCAGACCACGTGCCAACCAACAAAACTGATACCAA...TCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CCA 72 bp | TGTCACTATTCAGCTGTAAGGGTTACTTATGCATTCTaGTTATGCCTTTGCAAGATACACACATTTCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: CHYSAVRVTYAF*LCLCKIHTFPH Trigger: GTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAATGCATAAGTAACCCTTACAGCTGAATAGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CAA 90 bp | TTCAAACATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGAGTTCATATAAAACATTaGAATGACACTCAGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: FKHERERARSGMMLETLRVHIKH*NDTQQD Trigger: GTCCTGCTGAGTGTCATTCAAATGTTTTATATGAAC...TCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATGTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR GCA 72 bp | TTTAGCATGTCACTATTCAGCTGTAAGGGTTACTTATaGATTCTGGTTATGCCTTTGCAAGATACACACATT | + |
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Preference number: 3 (lower is better) Translates to: FSMSLFSCKGYL*ILVMPLQDTHI Trigger: AATGTGTGTATCTTGCAAAGGCATAACCAGAATGCATAAGTAACCCTTACAGCTGAATAGTGACATGCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR-3UTR CAA 90 bp | CCTATACAGGATATTTGTCATTCAAACTACCAGAGATCCTATGGTAAGTCTTTAAATTACTCTGATACCTaGGTAAAGATTACTTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PIQDICHSNYQRSYGKSLNYSDT*VKITCP Trigger: GGGACAAGTAATCTTTACCAAGGTATCAGAGTAATT...TAAAGACTTACCATAGGATCTCTGGTAGTTTGAATGACAAATATCCTGTATAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CCA 90 bp | AATTTCACCTTGATTGAGACTTTCCTGCTTATGATTACTGTCTGCACCCCTCCCGTTCTCTGGCGTTGCTaGGGCTGCTCCTCGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NFTLIETFLLMITVCTPPVLWRC*GCSSVL Trigger: CAGCACCGAGGAGCAGCCCCAGCAACGCCAGAGAAC...GGGAGGGGTGCAGACAGTAATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR TCA 90 bp | AAACATGGATGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCGAGTCCGGACCCAGTTaGTGGGATTGGAAAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: KHGCPTEVKLLWFYPVLIESGPS*WDWKIP Trigger: TGGGATTTTCCAATCCCATCAACTGGGTCCGGACTC...GATAAGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR GCA 90 bp | CCTATACAGGATATTTGTCATTCAAACTACCAGAGATCCTATGGTAAGTCTTTAGGGGCTGCTCCTCGGTaGTGTAGCTGCGGCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PIQDICHSNYQRSYGKSLGAAPR*CSCGWD Trigger: GTCCCAGCCGCAGCTACAGCACCGAGGAGCAGCCCC...TAAAGACTTACCATAGGATCTCTGGTAGTTTGAATGACAAATATCCTGTATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CCA 90 bp | CATGAAAGAGAGAGAGCCAGAAGTGGAATGATGTTAGAAACTCTCAGAGCCGGTTCCCCCAGCTTCACCTaGAACACATTGGCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: HERERARSGMMLETLRAGSPSFT*NTLAPL Trigger: AAGTGGAGCCAATGTGTTCCAGGTGAAGCTGGGGGA...ACCGGCTCTGAGAGTTTCTAACATCATTCCACTTCTGGCTCTCTCTCTTTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CCA 90 bp | GATGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCTGGATCATCACCTGGAACACATTaGCTCCACTTAAAGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: DVLQRSSCYGSTQSLSGSSPGTH*LHLKTH Trigger: GTGAGTCTTTAAGTGGAGCCAATGTGTTCCAGGTGA...TGATCCAGATAAGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR GCA 90 bp | AAACATGGATGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCCTGAAATTCATAGCTTaGACTGAGCAGCTGTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: KHGCPTEVKLLWFYPVLILKFIA*TEQLFS Trigger: ACTAAACAGCTGCTCAGTGCAAGCTATGAATTTCAG...GATAAGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR TCA 90 bp | AATTTCACCTTGATTGAGACTTTCCTGCTTATGATTACTGTCTGCACCCCTCCCGCTTTACTCCTTGTGTaGATTCCCTCTGAAATTCAT | + |
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Preference number: 4 (lower is better) Translates to: NFTLIETFLLMITVCTPPALLLV*IPSEIH Trigger: ATGAATTTCAGAGGGAATTCACACAAGGAGTAAAGC...GGGAGGGGTGCAGACAGTAATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CCA 90 bp | TTCTGGTTATGCCTTTGCAAGATACACACATTTCCTCACAACCTGTCTTTCAGAACTGTGACAGCAACTTaGATACATAAGCAAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FWLCLCKIHTFPHNLSFRTVTAT*IHKQKP Trigger: AGGCTTTTGCTTATGTATCCAAGTTGCTGTCACAGT...TCTGAAAGACAGGTTGTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR TCA 90 bp | ATTCCAGATGACTGGGGTACAGCTATATTAATTAGTGTTATGAAGCAATTGACTTGGAAAATCCCAGAATaGTCATTCTGGTTCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IPDDWGTAILISVMKQLTWKIPE*SFWFSG Trigger: GCCAGAGAACCAGAATGATCATTCTGGGATTTTCCA...AGTCAATTGCTTCATAACACTAATTAATATAGCTGTACCCCAGTCATCTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR TCA 90 bp | TTTTTGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGTCTTCACAGAACTCAGCGATACTaGACTCTTTGTCGAAATAGG | + |
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Preference number: 4 (lower is better) Translates to: FLPSYEQYTQTPVTLSLHRTQRY*TLCRNR Trigger: CCTATTTCGACAAAGAGTTCAGTATCGCTGAGTTCT...GTGAAGACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| 3UTR CAA 72 bp | CTACCAAACTCTTTTCCAAAGTGCCTGCACTATTTTTaGCCATCATATGAGCAATATACACAAACTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LPNSFPKCLHYF*PSYEQYTQTPV Trigger: AACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAAATAGTGCAGGCACTTTGGAAAAGAGTTTGGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCATCATATGAGCAATATACACAAACTCCAGTTACTCTAAGTCTTCACTCTGTAGCACCTCTTTaGCTACAAGTTCTTCCAATA | + |
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Preference number: 4 (lower is better) Translates to: FLPSYEQYTQTPVTLSLHSVAPL*LQVLPI Trigger: TATTGGAAGAACTTGTAGCCAAAGAGGTGCTACAGA...GTGAAGACTTAGAGTAACTGGAGTTTGTGTATATTGCTCATATGATGGCAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR GCA 90 bp | ATTCCAGATGACTGGGGTACAGCTATATTAATTAGTGTTATGAAGCAATTGACTAATGTCATCTATGTCTaGAGCAAGTGCATTCTTATG | + |
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Preference number: 4 (lower is better) Translates to: IPDDWGTAILISVMKQLTNVIYV*SKCILM Trigger: CATAAGAATGCACTTGCTGCAGACATAGATGACATT...AGTCAATTGCTTCATAACACTAATTAATATAGCTGTACCCCAGTCATCTGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CCA 90 bp | CCTATACAGGATATTTGTCATTCAAACTACCAGAGATCCTATGGTAAGTCTTTATCTCATCATAGTAAATaGAGATATCGCCTGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: PIQDICHSNYQRSYGKSLSHHSK*RYRLLM Trigger: CATCAACAGGCGATATCTCCATTTACTATGATGAGA...TAAAGACTTACCATAGGATCTCTGGTAGTTTGAATGACAAATATCCTGTATAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CAA 90 bp | AAACATGGATGTCCTACAGAGGTCAAGCTGCTATGGTTCTACCCAGTCCTTATCTCTGGTTCTCTGGCGTaGCTGGGGCTGCTCCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: KHGCPTEVKLLWFYPVLISGSLA*LGLLLG Trigger: ACCGAGGAGCAGCCCCAGCAACGCCAGAGAACCAGA...GATAAGGACTGGGTAGAACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CAA 90 bp | TTCTGGTTATGCCTTTGCAAGATACACACATTTCCTCACAACCTGTCTTTCAGACGAGTCCGGACCCAGTaGATGGGATTGGAAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: FWLCLCKIHTFPHNLSFRRVRTQ*MGLENP Trigger: GGGATTTTCCAATCCCATCAACTGGGTCCGGACTCG...TCTGAAAGACAGGTTGTGAGGAAATGTGTGTATCTTGCAAAGGCATAACCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CAA 90 bp | AATTTCACCTTGATTGAGACTTTCCTGCTTATGATTACTGTCTGCACCCCTCCCACCCAGTTGATGGGATaGGAAAATCCCAGAATGATC | + |
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Preference number: 5 (lower is better) Translates to: NFTLIETFLLMITVCTPPTQLMG*ENPRMI Trigger: GATCATTCTGGGATTTTCCAATCCCATCAACTGGGT...GGGAGGGGTGCAGACAGTAATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CAA 90 bp | GACCCAAAAATAAAGCCAGAGGACACACACACCCAGTGTGGTTATGCAATTGACATCTGTAGCACCTCTTaGGCTACAAGTTCTTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: DPKIKPEDTHTQCGYAIDICSTS*ATSSSN Trigger: ATTGGAAGAACTTGTAGCCAAAGAGGTGCTACAGAT...GTCAATTGCATAACCACACTGGGTGTGTGTGTCCTCTGGCTTTATTTTTGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS-3UTR CAA 90 bp | AATTTCACCTTGATTGAGACTTTCCTGCTTATGATTACTGTCTGCACCCCTCCCATCAGGCTTTACTCCTaGTGTGAATTCCCTCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: NFTLIETFLLMITVCTPPIRLYS*CEFPLK Trigger: TTTCAGAGGGAATTCACACAAGGAGTAAAGCCTGAT...GGGAGGGGTGCAGACAGTAATCATAAGCAGGAAAGTCTCAATCAAGGTGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS TCA 90 bp | AAACTTCCTTCCTTTCTCATCATAGTAAATGGAGATATCGCCTGTTaGTGTGTAGACAATGTCATCTATGTCTGCAGCAAGTGCATTCTT | + |
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Preference number: 5 (lower is better) Translates to: KLPSFLIIVNGDIAC*CVDNVIYVCSKCIL Trigger: AAGAATGCACTTGCTGCAGACATAGATGACATTGTCTACACATCAACAGGCGATATCTCCATTTACTATGATGAGAAAGGAAGGAAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS CAA 90 bp | GATGGGATTGGAAAATCCCAGAATGATCATTCTGGTTCTCTGGCGTaGCTGGGGCTGCTCCTCGGTGCTGTAGCTGCGGCTGGGACTAGC | + |
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Preference number: 6 (lower is better) Translates to: DGIGKSQNDHSGSLA*LGLLLGAVAAAGTS Trigger: GCTAGTCCCAGCCGCAGCTACAGCACCGAGGAGCAGCCCCAGCAACGCCAGAGAACCAGAATGATCATTCTGGGATTTTCCAATCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS CAA 72 bp | GGAAAATCCCAGAATGATCATTCTGGTTCTCTGGCGTaGCTGGGGCTGCTCCTCGGTGCTGTAGCTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GKSQNDHSGSLA*LGLLLGAVAAA Trigger: AGCCGCAGCTACAGCACCGAGGAGCAGCCCCAGCAACGCCAGAGAACCAGAATGATCATTCTGGGATTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS CAA 90 bp | CTTGGAGTGTTCAATCCGCGCAATCGTCCAATCAGGCTTTACTCCTaGTGTGAATTCCCTCTGAAATTCATAGCTTGCACTGAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGVFNPRNRPIRLYS*CEFPLKFIACTEQL Trigger: CAGCTGCTCAGTGCAAGCTATGAATTTCAGAGGGAATTCACACAAGGAGTAAAGCCTGATTGGACGATTGCGCGGATTGAACACTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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| CDS CAA 72 bp | TTCAATCCGCGCAATCGTCCAATCAGGCTTTACTCCTaGTGTGAATTCCCTCTGAAATTCATAGCTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: FNPRNRPIRLYS*CEFPLKFIACT Trigger: AGTGCAAGCTATGAATTTCAGAGGGAATTCACACAAGGAGTAAAGCCTGATTGGACGATTGCGCGGATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027114.6 |
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