Pregenerated sensors for MAGT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031232Ensembl transcript IDs: ENSMUST00000033583.14, ENSMUST00000113566.10, ENSMUST00000139421.3, ENSMUST00000151689.9, ENSMUST00000238718.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGAGGGTTGTGAGCCACCATGTGGTTGCCGGGAATTGAACTCATaGTCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCT | + |
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Preference number: 1 (lower is better) Translates to: TEGCEPPCGCRELNS*SLEEQSVLLTTEPS Trigger: AGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGATCATGAGTTCAATTCCCGGCAACCACATGGTGGCTCACAACCCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR CCA 90 bp | AGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCCCGAGTGCACTaGGATAACACACATGTGCTTACACCCATACCCGGCTTATGTGAT | + |
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Preference number: 1 (lower is better) Translates to: RMRVNFWFPSVSRVH*DNTHVLTPIPGLCD Trigger: ATCACATAAGCCGGGTATGGGTGTAAGCACATGTGTGTTATCCCAGTGCACTCGGGAGACAGATGGGAACCAGAAGTTCACCCTCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR GCA 90 bp | CCTAGATTTTTGTGGTATTTGGGATTGAACCCACAGCCTTTTAAGTaGTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PRFLWYLGLNPQPFK*SSTELHSKPPAFSL Trigger: GAGAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCTGTGGGTTCAATCCCAAATACCACAAAAATCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR GCA 90 bp | TTGGATTCTACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGTaGCTGCTACCATTCTTTGTATCTCTAATTGACGGGGTAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: LDSTSASRVAKSRGR*LLPFFVSLIDGVNK Trigger: TTTATTTACCCCGTCAATTAGAGATACAAAGAATGGTAGCAGGCACCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGTAGAATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR TCA 90 bp | CATTGGGAAGGGAAGGTTAGGAGGAGCACAATTCCAAACACTTCATaGTCTTTACAACTGCTTGTTAAGGCACTACACATCTTTGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: HWEGKVRRSTIPNTS*SLQLLVKALHIFGL Trigger: TAAACCAAAGATGTGTAGTGCCTTAACAAGCAGTTGTAAAGATCATGAAGTGTTTGGAATTGTGCTCCTCCTAACCTTCCCTTCCCAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCATGCAACCCCAGCACTTaGGAAGCTGAGACAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PREAPAARDNTVGVLPSSCNPST*EAETGG Trigger: TCCTCCTGTCTCAGCTTCTCAAGTGCTGGGGTTGCA...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCGTGGTTGCTGGGATTTaGACTCAGGACCTTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLLSALALSSTPSLLPSLVVAGI*TQDLRK Trigger: CTTCCTAAGGTCCTGAGTTCAAATCCCAGCAACCAC...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCATGAGGGTGAACTTCTaGTTCCCATCTGTCTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: SLLSALALSSTPSLLPSLMRVNF*FPSVSR Trigger: TCGGGAGACAGATGGGAACCAGAAGTTCACCCTCAT...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCGCCCCAGCCTCAGCTTaGAAACATGCTACTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLLSALALSSTPSLLPSLAPASA*KHATFL Trigger: AAGAAAAGTAGCATGTTTTCAAGCTGAGGCTGGGGC...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCTGCAACCCCAGCACTTaGGAAGCTGAGACAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLCNPST*EAETGG Trigger: TCCTCCTGTCTCAGCTTCTCAAGTGCTGGGGTTGCA...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCATACCCGGCTTATGTGATGTTGTGGTTTGAACCCATGGCTAGGCAAGCAGTGGTTGCTGGGATTTaGACTCAGGACCTTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HPYPAYVMLWFEPMARQAVVAGI*TQDLRK Trigger: CTTCCTAAGGTCCTGAGTTCAAATCCCAGCAACCAC...TGCTTGCCTAGCCATGGGTTCAAACCACAACATCACATAAGCCGGGTATGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCCGGGAATTGAACTCATaGTCTCTGGAAGAGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SLLSALALSSTPSLLPSLRELNS*SLEEQS Trigger: TGACTGCTCTTCCAGAGATCATGAGTTCAATTCCCG...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCACTTATACTCACGCTATaGTCAAGGATGAGGGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PREAPAARDNTVGVLPSSLILTL*SRMRVN Trigger: GTTCACCCTCATCCTTGAGCATAGCGTGAGTATAAG...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCATACCCGGCTTATGTGATGTTGTGGTTTGAACCCATGGCTAGGCAAGCAATGACACAGTGTATATaGTACCTGGGCCCAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: HPYPAYVMLWFEPMARQAMTQCI*YLGPRG Trigger: TCCTCTTGGGCCCAGGTATCATATACACTGTGTCAT...TGCTTGCCTAGCCATGGGTTCAAACCACAACATCACATAAGCCGGGTATGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGACCACAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTGGCAAACCAAGTGTATATGATACCTaGGCCCAAGAGGAAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ADHKLTELSLHLPQPGKPSVYDT*AQEERS Trigger: AGACCTTTCCTCTTGGGCCCAGGTATCATATACACT...TGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTGTGGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCAGTAGCTGATTTCAGGTaGAAAGACACAGGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: PREAPAARDNTVGVLPSSVADFR*KDTGRH Trigger: ATGTCTTCCTGTGTCTTTCCACCTGAAATCAGCTAC...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCAAGTTCTTGGTCTTCTTaGATTCTACTTCAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PREAPAARDNTVGVLPSSSSWSS*ILLQPA Trigger: TGCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACT...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCAAGCACTATACCTCTGAGCCCCAGCCTCAGCTTGAAAACATGCTACTTTGCAATAGGCAGAGGTaGAGATTCCTGCTCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: LGKHYTSEPQPQLENMLLCNRQR*RFLLRT Trigger: GGTTCTGAGCAGGAATCTCCACCTCTGCCTATTGCA...AAGTAGCATGTTTTCAAGCTGAGGCTGGGGCTCAGAGGTATAGTGCTTGCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCGACACGGTCCATTTTCAGATGACACAGTGTATATGATACCTGGGCCCATGACACAGTGTATATaGTACCTGGGCCCAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QRRHGPFSDDTVYMIPGPMTQCI*YLGPRG Trigger: TCCTCTTGGGCCCAGGTATCATATACACTGTGTCAT...GGGCCCAGGTATCATATACACTGTGTCATCTGAAAATGGACCGTGTCGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCCAGCACTTGAGAAGCTaGGACAGGAGGATGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLQHLRS*DRRMNV Trigger: CACATTCATCCTCCTGTCTCAGCTTCTCAAGTGCTG...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCTGTGGTATTTGGGATTaGACCCACAGCCTTTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: SLLSALALSSTPSLLPSLCGIWD*THSLLS Trigger: ACTTAAAAGGCTGTGGGTTCAATCCCAAATACCACA...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCATGACACAGTGTATATaGTACCTGGGCCCAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLMTQCI*YLGPRG Trigger: TCCTCTTGGGCCCAGGTATCATATACACTGTGTCAT...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCTTCTTGGATTCTACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGAGGGAGTCCTTTCCATaGACACAACTCAGCTTATTT | + |
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Preference number: 2 (lower is better) Translates to: LVFLDSTSASRVAKSRGRRESFP*TQLSLF Trigger: AAATAAGCTGAGTTGTGTTCATGGAAAGGACTCCCT...CCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGTAGAATCCAAGAAGACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCCCAGATGCAGTTGTTTaGAATAGGCAGAGGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLPDAVV*NRQRWR Trigger: TCTCCACCTCTGCCTATTGCAAACAACTGCATCTGG...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR CAA 90 bp | ACATCTGCACAAAGAAGGAAAAGGAACAATGGCTTCCAGATGCAGTaGTTTGCAATAGGCAGAGGTGGAGATTCCTGCTCAGAACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TSAQRRKRNNGFQMQ*FAIGRGGDSCSEPS Trigger: GGAAGGTTCTGAGCAGGAATCTCCACCTCTGCCTATTGCAAACAACTGCATCTGGAAGCCATTGTTCCTTTTCCTTCTTTGTGCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGCCAGAATGTGTCAAGTTCTTGGTCTTCTTGGATTCTACTTCAGCCAGCCAGCACTTGAGAAGCTaGGACAGGAGGATGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: MMPECVKFLVFLDSTSASQHLRS*DRRMNV Trigger: CACATTCATCCTCCTGTCTCAGCTTCTCAAGTGCTG...GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTTGACACATTCTGGCATCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTAAGAGCAGAGGCAGGTaGCTGCTACCATTCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: EVRAARALSQRQVSRTLLKSRGR*LLPFFV Trigger: TACAAAGAATGGTAGCAGGCACCTGCCTCTGCTCTT...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGCCAGAATGTGTCAAGTTCTTGGTCTTCTTGGATTCTACTTCAGCCAGCATGACACAGTGTATATaGTACCTGGGCCCAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: MMPECVKFLVFLDSTSASMTQCI*YLGPRG Trigger: TCCTCTTGGGCCCAGGTATCATATACACTGTGTCAT...GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTTGACACATTCTGGCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR TCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCTGTGGTATTTGGGATTaGACCCACAGCCTTTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLCGIWD*THSLLS Trigger: ACTTAAAAGGCTGTGGGTTCAATCCCAAATACCACA...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCTTCTTGGATTCTACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGCTCAGCTTGAAAACATaGTACTTTTCTTCCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LVFLDSTSASRVAKSRGRLSLKT*YFSSFL Trigger: AAGGAAGGAAGAAAAGTAGCATGTTTTCAAGCTGAG...CCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGTAGAATCCAAGAAGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | ATGATGCCAGAATGTGTCAAGTTCTTGGTCTTCTTGGATTCTACTTCAGCCAGCAAGAGCAGAGGCAGGTaGCTGCTACCATTCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: MMPECVKFLVFLDSTSASKSRGR*LLPFFV Trigger: TACAAAGAATGGTAGCAGGCACCTGCCTCTGCTCTT...GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTTGACACATTCTGGCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAAGTGTATATGATACCTaGGCCCAAGAGGAAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: AFIYHSLANHFISVPRQQSVYDT*AQEERS Trigger: AGACCTTTCCTCTTGGGCCCAGGTATCATATACACT...TTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCTCATCTACCACAGCCTaGCAAACCATTTCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLSSTTA*QTISFL Trigger: CAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGA...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCAATGTGTCAAGTTCTTaGTCTTCTTGGATTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: SLLSALALSSTPSLLPSLNVSSS*SSWILL Trigger: AAGTAGAATCCAAGAAGACCAAGAACTTGACACATT...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAATCATCTACCACAGCCTaGCAAACCATTTCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SAFIYHSLANHFISVPRQSSTTA*QTISFL Trigger: CAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGA...TTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTAGTTCTTGGTCTTCTTaGATTCTACTTCAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVRAARALSQRQVSRTLLSSWSS*ILLQPA Trigger: TGCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACT...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAATCAGTATTTCATGCAATAGGCAGAGGTaGAGATTCCTGCTCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: HSLANHFISVPRQQISISCNRQR*RFLLRT Trigger: GGTTCTGAGCAGGAATCTCCACCTCTGCCTATTGCA...TGAAATACTGATTTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCAAGGAAAAGGAACAATaGCTTCCAGATGCAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: YTHAMLKDEGELLVPICLKEKEQ*LPDAVV Trigger: AACAACTGCATCTGGAAGCCATTGTTCCTTTTCCTT...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAATCAGTATTTCACCAGATGCAGTTGTTTaGAATAGGCAGAGGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HSLANHFISVPRQQISISPDAVV*NRQRWR Trigger: TCTCCACCTCTGCCTATTGCAAACAACTGCATCTGG...TGAAATACTGATTTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAATCAGTAAGTGTATATGATACCTaGGCCCAAGAGGAAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: STTAWQTISFLYLGNKSVSVYDT*AQEERS Trigger: AGACCTTTCCTCTTGGGCCCAGGTATCATATACACT...TACTGATTTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGAAGGAAAAGGAACAATaGCTTCCAGATGCAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: REVRAARALSQRQVSRTLKEKEQ*LPDAVV Trigger: AACAACTGCATCTGGAAGCCATTGTTCCTTTTCCTT...CAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTCTCAGCTTGAAAACATaGTACTTTTCTTCCTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: EVRAARALSQRQVSRTLLLSLKT*YFSSFL Trigger: AAGGAAGGAAGAAAAGTAGCATGTTTTCAAGCTGAG...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGCTTATTTTTCTGAGTGTATATGATACCTaGGCCCAAGAGGAAAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SHSSKGVLSMNTTQLIFLSVYDT*AQEERS Trigger: AGACCTTTCCTCTTGGGCCCAGGTATCATATACACT...CAGAAAAATAAGCTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGATTGTGTTTTCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGCATGATCTTTACAACTaGTTGTTAAGGCACTACACA | + |
|
Preference number: 2 (lower is better) Translates to: MIVFSHSSKGVLSMNTTQHDLYN*LLRHYT Trigger: TGTGTAGTGCCTTAACAAGCAGTTGTAAAGATCATG...CTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGAAAACACAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAAGGAAAAATTCACAGACCAGGTTTCAAGAAATCTTTCTAAGGCATTGGTCATCTACCACAGCCTaGCAAACCATTTCATTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KTRKNSQTRFQEIFLRHWSSTTA*QTISFL Trigger: CAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGA...CCAATGCCTTAGAAAGATTTCTTGAAACCTGGTCTGTGAATTTTTCCTTGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CCA 72 bp | GTGAACTTCTGGTTCCCATCTGTCTCCCGAGTGCACTaGGATAACACACATGTGCTTACACCCATACCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: VNFWFPSVSRVH*DNTHVLTPIPG Trigger: GCCGGGTATGGGTGTAAGCACATGTGTGTTATCCCAGTGCACTCGGGAGACAGATGGGAACCAGAAGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR TCA 72 bp | CAGAGGGTTGTGAGCCACCATGTGGTTGCCGGGAATTaGACTCATGATCTCTGGAAGAGCAGTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QRVVSHHVVAGN*THDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGAGATCATGAGTTCAATTCCCGGCAACCACATGGTGGCTCACAACCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR GCA 72 bp | ACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGTaGCTGCTACCATTCTTTGTATCTCTAATTGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: TSASRVAKSRGR*LLPFFVSLIDG Trigger: CCCGTCAATTAGAGATACAAAGAATGGTAGCAGGCACCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR GCA 72 bp | CATCTGTCTCCCGAGTGCACTGGGATAACACACATGTaGTTACACCCATACCCGGCTTATGTGATGTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HLSPECTGITHM*LHPYPAYVMLW Trigger: CCACAACATCACATAAGCCGGGTATGGGTGTAAGCACATGTGTGTTATCCCAGTGCACTCGGGAGACAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CCA 72 bp | TGGCTTCCAGATGCAGTTGTTTGCAATAGGCAGAGGTaGAGATTCCTGCTCAGAACCTTCCATCCCCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: WLPDAVVCNRQR*RFLLRTFHPQP Trigger: AGGTTGGGGATGGAAGGTTCTGAGCAGGAATCTCCACCTCTGCCTATTGCAAACAACTGCATCTGGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR TCA 72 bp | TGTGAGCCACCATGTGGTTGCCGGGAATTGAACTCATaGTCTCTGGAAGAGCAGTCAGTGCTCTTAACCACT | + |
|
Preference number: 3 (lower is better) Translates to: CEPPCGCRELNS*SLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGCTCTTCCAGAGATCATGAGTTCAATTCCCGGCAACCACATGGTGGCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCCAGGTTTCAAGAACATaGCTTTTAGAAAACCGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLLSALALSSTPSLLPSLQVSRT*LLENRH Trigger: GTGCCGGTTTTCTAAAAGCAATGTTCTTGAAACCTG...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CCA 72 bp | GCTAAACTGATAGCAAAAGCAGATTACAGTCAATGGTaGCACAAGCCTGCAACCCCAGCACTTGAGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKLIAKADYSQW*HKPATPALEKL Trigger: CAGCTTCTCAAGTGCTGGGGTTGCAGGCTTGTGCCACCATTGACTGTAATCTGCTTTTGCTATCAGTTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTCTTCTTGGATTCTACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGTCTAAGGCATTGGGATaGAACACAGAGTGTAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVFLDSTSASRVAKSRGRSKALG*NTECNS Trigger: AGAGTTACACTCTGTGTTCAATCCCAATGCCTTAGA...CCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGTAGAATCCAAGAAGACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGTGCGCCACCACTGCCCGGCCTAAGAGTACACTTTCTTAACAGTAGCATTGAATGTGTCAAGTTCTaGGTCTTCTTGGATTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: RCAPPLPGLRVHFLNSSIECVKF*VFLDST Trigger: AGTAGAATCCAAGAAGACCAAGAACTTGACACATTC...AATGCTACTGTTAAGAAAGTGTACTCTTAGGCCGGGCAGTGGTGGCGCACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR TCA 72 bp | AGGACCTTAGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCTCCCTGGATTATTCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RTLGRAVSALNH*AISPAPWIILN Trigger: ATTAAGAATAATCCAGGGAGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCTAAGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR GCA 72 bp | CTTTATGTAGCTCAGGTTGGCCTTATACTCACGCTATaGTCAAGGATGAGGGTGAACTTCTGGTTCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LYVAQVGLILTL*SRMRVNFWFPS Trigger: AGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATAAGGCCAACCTGAGCTACATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CCA 72 bp | ATGTGCTTACACCCATACCCGGCTTATGTGATGTTGTaGTTTGAACCCATGGCTAGGCAAGCACTGTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: MCLHPYPAYVML*FEPMARQALYQ Trigger: TTGATACAGTGCTTGCCTAGCCATGGGTTCAAACCACAACATCACATAAGCCGGGTATGGGTGTAAGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTAAGTTCTTGGTCTTCTaGGATTCTACTTCAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EVRAARALSQRQVSRTLLKFLVF*DSTSAS Trigger: GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTT...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCGACACGGTCCATTTTCAGATGACACAGTGTATATGATACCTGGGCCCGATCTTTACAACTGCTaGTTAAGGCACTACACATCT | + |
|
Preference number: 3 (lower is better) Translates to: QRRHGPFSDDTVYMIPGPDLYNC*LRHYTS Trigger: AGATGTGTAGTGCCTTAACAAGCAGTTGTAAAGATC...GGGCCCAGGTATCATATACACTGTGTCATCTGAAAATGGACCGTGTCGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CCA 72 bp | CAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTaGCAAACCATTTCATTTCTGTACCTAGGCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QTHRAQPSSTTA*QTISFLYLGNK Trigger: TTTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CCA 72 bp | AAAGCTAAACTGATAGCAAAAGCAGATTACAGTCAATaGTGGCACAAGCCTGCAACCCCAGCACTTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KAKLIAKADYSQ*WHKPATPALEK Trigger: CTTCTCAAGTGCTGGGGTTGCAGGCTTGTGCCACCATTGACTGTAATCTGCTTTTGCTATCAGTTTAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGTCTAAGGCATTGGGATaGAACACAGAGTGTAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: REVRAARALSQRQVSRTLSKALG*NTECNS Trigger: AGAGTTACACTCTGTGTTCAATCCCAATGCCTTAGA...CAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCAGGTTTCAAGAACATaGCTTTTAGAAAACCGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: REVRAARALSQRQVSRTLQVSRT*LLENRH Trigger: GTGCCGGTTTTCTAAAAGCAATGTTCTTGAAACCTG...CAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR TCA 72 bp | TTGTGTTTTCTCATTCTTCTAAGGGAGTCCTTTCCATaGACACAACTCAGCTTATTTTTCTGTTACATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCFLILLRESFP*TQLSLFFCYIR Trigger: TCTTATGTAACAGAAAAATAAGCTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGAAAACACAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CCA 90 bp | CTAGGCAAGCACTATACCTCTGAGCCCCAGCCTCAGCTTGAAAACATGCTACTTAGCACGGTCCGAGGGTaGGGCGTGAGAACGGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKHYTSEPQPQLENMLLSTVRG*GVRTGE Trigger: TTCGCCCGTTCTCACGCCCCACCCTCGGACCGTGCT...AAGTAGCATGTTTTCAAGCTGAGGCTGGGGCTCAGAGGTATAGTGCTTGCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000238718.2 |
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| CDS-3UTR GCA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCAATCCACCGGGCAATCTaGTCAGCTGAAAACCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PREAPAARDNTVGVLPSSIHRAI*SAENPR Trigger: GCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGAT...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR GCA 90 bp | GCTGACCACAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTGGCAAACCAATCCACCGGGCAATCTaGTCAGCTGAAAACCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ADHKLTELSLHLPQPGKPIHRAI*SAENPR Trigger: GCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGAT...TGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTGTGGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGCACTTGAGAAGCTGAGACAGGAGGATGAATGTGAGCTGAAGGCGGGAGACATCAGTTCTGTCTaGAATCCACCGGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPALEKLRQEDECELKAGDISSV*NPPGNL Trigger: CAGATTGCCCGGTGGATTGCAGACAGAACTGATGTC...TCCCGCCTTCAGCTCACATTCATCCTCCTGTCTCAGCTTCTCAAGTGCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCAGAAAACCCTCGCACCTaGAACTCATATGTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PREAPAARDNTVGVLPSSENPRT*NSYVSA Trigger: GGCTGATACATATGAGTTGCAGGTGCGAGGGTTTTC...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCGACACGGTCCATTTTCAGATGACACAGTGTATATGATACCTGGGCCCATCCACCGGGCAATCTaGTCAGCTGAAAACCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRRHGPFSDDTVYMIPGPIHRAI*SAENPR Trigger: GCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGAT...GGGCCCAGGTATCATATACACTGTGTCATCTGAAAATGGACCGTGTCGCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | GCTGACCACAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTGGCAAACCAGACATCAGTTCTGTCTaGAATCCACCGGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADHKLTELSLHLPQPGKPDISSV*NPPGNL Trigger: CAGATTGCCCGGTGGATTGCAGACAGAACTGATGTC...TGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTGTGGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | CACCCATACCCGGCTTATGTGATGTTGTGGTTTGAACCCATGGCTAGGCAAGCAGACATCAGTTCTGTCTaGAATCCACCGGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPYPAYVMLWFEPMARQADISSV*NPPGNL Trigger: CAGATTGCCCGGTGGATTGCAGACAGAACTGATGTC...TGCTTGCCTAGCCATGGGTTCAAACCACAACATCACATAAGCCGGGTATGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCAGACCAGAACCACCTTaGCGAGGCCATGTTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTHAMLKDEGELLVPICLRPEPP*RGHVHA Trigger: AGCGTGAACATGGCCTCGCCAAGGTGGTTCTGGTCT...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGGGCAATCTGCTCAGCTaGAAACCCTCGCACCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: REVRAARALSQRQVSRTLGNLLS*KPSHLQ Trigger: TTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCC...CAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAAGGCAATCTGCTCAGCTaGAAACCCTCGCACCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFIYHSLANHFISVPRQGNLLS*KPSHLQ Trigger: TTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCC...TTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTGGCAATCTGCTCAGCTaGAAACCCTCGCACCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVRAARALSQRQVSRTLLGNLLS*KPSHLQ Trigger: TTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCC...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAGGCAATCTGCTCAGCTaGAAACCCTCGCACCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AFIYHSLANHFISVPRQQGNLLS*KPSHLQ Trigger: TTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCC...TTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTATCCACCGGGCAATCTaGTCAGCTGAAAACCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVRAARALSQRQVSRTLLIHRAI*SAENPR Trigger: GCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGAT...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | TCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGCTTATTTTTCTGAGCACGGTCCGAGGGTaGGGCGTGAGAACGGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKGVLSMNTTQLIFLSTVRG*GVRTGE Trigger: TTCGCCCGTTCTCACGCCCCACCCTCGGACCGTGCT...CAGAAAAATAAGCTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGAGACCAGAACCACCTTaGCGAGGCCATGTTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: REVRAARALSQRQVSRTLRPEPP*RGHVHA Trigger: AGCGTGAACATGGCCTCGCCAAGGTGGTTCTGGTCT...CAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGCAAGCACTATACCTCTGAGCCCCAGCCTCAGCTTGAAAACATGCTACTTGCCCATTCCATCAGCTaGCTAACCTTCTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKHYTSEPQPQLENMLLAHSIS*LTFSDN Trigger: GTTATCTGAGAAGGTTAGTCAGCTGATGGAATGGGC...AAGTAGCATGTTTTCAAGCTGAGGCTGGGGCTCAGAGGTATAGTGCTTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAGACATCAGTTCTGTCTaGAATCCACCGGGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFIYHSLANHFISVPRQQDISSV*NPPGNL Trigger: CAGATTGCCCGGTGGATTGCAGACAGAACTGATGTC...TTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCTTACAGGTCTCTTATTaGCCCATTCCATCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQPSSTTAWQTISFLYLGLQVSY*PIPSAD Trigger: GTCAGCTGATGGAATGGGCCAATAAGAGACCTGTAA...GCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGCAAGCACTATACCTCTGAGCCCCAGCCTCAGCTTGAAAACATGCTACTTTTACAGGTCTCTTATTaGCCCATTCCATCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKHYTSEPQPQLENMLLLQVSY*PIPSAD Trigger: GTCAGCTGATGGAATGGGCCAATAAGAGACCTGTAA...AAGTAGCATGTTTTCAAGCTGAGGCTGGGGCTCAGAGGTATAGTGCTTGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | TACCTGGGCCCAAGAGGAAAGGTCTGTAAAGCACACACATCAGTGTCAATGTTTGCCCATTCCATCAGCTaGCTAACCTTCTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLGPRGKVCKAHTSVSMFAHSIS*LTFSDN Trigger: GTTATCTGAGAAGGTTAGTCAGCTGATGGAATGGGC...AAACATTGACACTGATGTGTGTGCTTTACAGACCTTTCCTCTTGGGCCCAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCGACACGGTCCATTTTCAGATGACACAGTGTATATGATACCTGGGCCCACGACACATTGTCTATaGAGTTGGAGAGCAGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRRHGPFSDDTVYMIPGPTTHCL*SWRAVN Trigger: GTTTACTGCTCTCCAACTTCATAGACAATGTGTCGT...GGGCCCAGGTATCATATACACTGTGTCATCTGAAAATGGACCGTGTCGCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTCTTCTTGGATTCTACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGTATCCTGTTGGTAAATaGATTGGAGTATCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVFLDSTSASRVAKSRGRYPVGK*IGVSPR Trigger: TCTTGGCGATACTCCAATGCATTTACCAACAGGATA...CCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGTAGAATCCAAGAAGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | ATGATGCCAGAATGTGTCAAGTTCTTGGTCTTCTTGGATTCTACTTCAGCCAGCATCTCCTTCTTTCTTTaGGCAGAGGCCGAAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: MMPECVKFLVFLDSTSASISFFL*AEAEGT Trigger: GGTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGAT...GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTTGACACATTCTGGCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | ATGATGCCAGAATGTGTCAAGTTCTTGGTCTTCTTGGATTCTACTTCAGCCAGCGCCCATTCCATCAGCTaGCTAACCTTCTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: MMPECVKFLVFLDSTSASAHSIS*LTFSDN Trigger: GTTATCTGAGAAGGTTAGTCAGCTGATGGAATGGGC...GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTTGACACATTCTGGCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | ACAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTAAACATGACGACAACTaGGTAATTTCTCGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNSQSSAFIYHSLANHFIKHDDN*VISRWS Trigger: GCTCCACCGAGAAATTACTCAGTTGTCGTCATGTTT...AATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGTGCGCCACCACTGCCCGGCCTAAGAGTACACTTTCTTAACAGTAGCATTCATTTGAAATACATCTaGGCCTTCATCAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RCAPPLPGLRVHFLNSSIHLKYI*AFIKIH Trigger: GTGGATTTTGATGAAGGCTCAGATGTATTTCAAATG...AATGCTACTGTTAAGAAAGTGTACTCTTAGGCCGGGCAGTGGTGGCGCACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTTCTTGGATTCTACTTCAGCCAGCAGGGTAGCTAAGAGCAGAGGCAGGGGGTCCAGCATAATTTaGAGGTCTAATTACTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLDSTSASRVAKSRGRGSSII*RSNYSN Trigger: ATTAGAGTAATTAGACCTCCAAATTATGCTGGACCC...CCTGCCTCTGCTCTTAGCTACCCTGCTGGCTGAAGTAGAATCCAAGAAGACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGCGCCACCACTGCCCGGCCTAAGAGTACACTTTCTTAACAGTAGCATTGGGTCCAGCATAATTTaGAGGTCTAATTACTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RCAPPLPGLRVHFLNSSIGSSII*RSNYSN Trigger: ATTAGAGTAATTAGACCTCCAAATTATGCTGGACCC...AATGCTACTGTTAAGAAAGTGTACTCTTAGGCCGGGCAGTGGTGGCGCACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGCTTACGACACATTGTCTATaGAGTTGGAGAGCAGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVRAARALSQRQVSRTLLTTHCL*SWRAVN Trigger: GTTTACTGCTCTCCAACTTCATAGACAATGTGTCGT...AAGCAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAGGTCTGTAAAGCACACACATCAGTGTCAATGTTTCTCTGGAATCCTCTTACAGGTCTCTTATTaGCCCATTCCATCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EERSVKHTHQCQCFSGILLQVSY*PIPSAD Trigger: GTCAGCTGATGGAATGGGCCAATAAGAGACCTGTAA...GAGGATTCCAGAGAAACATTGACACTGATGTGTGTGCTTTACAGACCTTTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 |
||
| CDS-3UTR CCA 90 bp | ATGATGCCAGAATGTGTCAAGTTCTTGGTCTTCTTGGATTCTACTTCAGCCAGCTTACAGGTCTCTTATTaGCCCATTCCATCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MMPECVKFLVFLDSTSASLQVSY*PIPSAD Trigger: GTCAGCTGATGGAATGGGCCAATAAGAGACCTGTAA...GCTGGCTGAAGTAGAATCCAAGAAGACCAAGAACTTGACACATTCTGGCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCCCAAGAGGAAAGGTCTGTAAAGCACACACATCAGTGTCAATGTTTCAATAGAAGAACGATGTaGGTTTCAGCTACAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWAQEERSVKHTHQCQCFNRRTM*VSATNW Trigger: CCAGTTTGTAGCTGAAACCCACATCGTTCTTCTATT...GAAACATTGACACTGATGTGTGTGCTTTACAGACCTTTCCTCTTGGGCCCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 |
||
| CDS-3UTR CCA 90 bp | TATACTCACGCTATGCTCAAGGATGAGGGTGAACTTCTGGTTCCCATCTGTCTCAATAGAAGAACGATGTaGGTTTCAGCTACAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTHAMLKDEGELLVPICLNRRTM*VSATNW Trigger: CCAGTTTGTAGCTGAAACCCACATCGTTCTTCTATT...GAGACAGATGGGAACCAGAAGTTCACCCTCATCCTTGAGCATAGCGTGAGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACATTTGAAATACATCTaGGCCTTCATCAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFIYHSLANHFISVPRQHLKYI*AFIKIH Trigger: GTGGATTTTGATGAAGGCTCAGATGTATTTCAAATG...TTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAACATTTGAAATACATCTaGGCCTTCATCAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFIYHSLANHFISVPRQQHLKYI*AFIKIH Trigger: GTGGATTTTGATGAAGGCTCAGATGTATTTCAAATG...TTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGCTTATTTTTCTGGAAAACCCTCGCACCTaGAACTCATATGTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKGVLSMNTTQLIFLENPRT*NSYVSA Trigger: GGCTGATACATATGAGTTGCAGGTGCGAGGGTTTTC...CAGAAAAATAAGCTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAAGGGTCCAGCATAATTTaGAGGTCTAATTACTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAFIYHSLANHFISVPRQGSSII*RSNYSN Trigger: ATTAGAGTAATTAGACCTCCAAATTATGCTGGACCC...TTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR TCA 90 bp | AAAACAAGGAAAAATTCACAGACCAGGTTTCAAGAAATCTTTCTAAGGCATTGGGCCCATTCCATCAGCTaGCTAACCTTCTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTRKNSQTRFQEIFLRHWAHSIS*LTFSDN Trigger: GTTATCTGAGAAGGTTAGTCAGCTGATGGAATGGGC...CCAATGCCTTAGAAAGATTTCTTGAAACCTGGTCTGTGAATTTTTCCTTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTACTTCTGAATGTGTAAAAGGAGGCATATATGTAGCTGATTTCAGGTGGAATAGAAGAACGATGTaGGTTTCAGCTACAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTSECVKGGIYVADFRWNRRTM*VSATNW Trigger: CCAGTTTGTAGCTGAAACCCACATCGTTCTTCTATT...CCACCTGAAATCAGCTACATATATGCCTCCTTTTACACATTCAGAAGTACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| 3UTR CAA 72 bp | TTCAGTTACATTCCTAGATTTTTGTGGTATTTGGGATaGAACCCACAGCCTTTTAAGTGCTCTAGCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSYIPRFLWYLG*NPQPFKCSSTE Trigger: CTCAGTGCTAGAGCACTTAAAAGGCTGTGGGTTCAATCCCAAATACCACAAAAATCTAGGAATGTAACTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGCTTATTTTTCTGTATCCTGTTGGTAAATaGATTGGAGTATCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKGVLSMNTTQLIFLYPVGK*IGVSPR Trigger: TCTTGGCGATACTCCAATGCATTTACCAACAGGATA...CAGAAAAATAAGCTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | ATGATTGTGTTTTCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGGGGTCCAGCATAATTTaGAGGTCTAATTACTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: MIVFSHSSKGVLSMNTTQGSSII*RSNYSN Trigger: ATTAGAGTAATTAGACCTCCAAATTATGCTGGACCC...CTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGAAAACACAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAAGGAAAAATTCACAGACCAGGTTTCAAGAAATCTTTCTAAGGCATTGGTATCCTGTTGGTAAATaGATTGGAGTATCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTRKNSQTRFQEIFLRHWYPVGK*IGVSPR Trigger: TCTTGGCGATACTCCAATGCATTTACCAACAGGATA...CCAATGCCTTAGAAAGATTTCTTGAAACCTGGTCTGTGAATTTTTCCTTGTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGGAAAAATTCACAGACCAGGTTTCAAGAAATCTTTCTAAGGCATTGGAATAGAAGAACGATGTaGGTTTCAGCTACAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTRKNSQTRFQEIFLRHWNRRTM*VSATNW Trigger: CCAGTTTGTAGCTGAAACCCACATCGTTCTTCTATT...CCAATGCCTTAGAAAGATTTCTTGAAACCTGGTCTGTGAATTTTTCCTTGTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS GCA 90 bp | CTTTCTTTGGGCAGAGGCCGAAGGAACCTTGGAAACGAGCAGCAGTaGCACCGCTGCGATCGCACACACAGACCAGAACCACCTTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLGRGRRNLGNEQQ*HRCDRTHRPEPPWR Trigger: TCGCCAAGGTGGTTCTGGTCTGTGTGTGCGATCGCAGCGGTGGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTCTGCCCAAAGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS CCA 90 bp | ATAACACCATCTCCTTCTTTCTTTGGGCAGAGGCCGAAGGAACCTTaGAAACGAGCAGCAGTGCCACCGCTGCGATCGCACACACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: ITPSPSFFGQRPKEP*KRAAVPPLRSHTQT Trigger: GGTCTGTGTGTGCGATCGCAGCGGTGGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGATGGTGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGCGCCACCACTGCCCGGCCTAAGAGTACACTTTCTTAACAGTAGCATTGAGGCCGAAGGAACCTaGGAAACGAGCAGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RCAPPLPGLRVHFLNSSIEAEGT*ETSSSA Trigger: GGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTC...AATGCTACTGTTAAGAAAGTGTACTCTTAGGCCGGGCAGTGGTGGCGCACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | TACCTGGGCCCAAGAGGAAAGGTCTGTAAAGCACACACATCAGTGTCAATGTTTGAGGCCGAAGGAACCTaGGAAACGAGCAGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YLGPRGKVCKAHTSVSMFEAEGT*ETSSSA Trigger: GGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTC...AAACATTGACACTGATGTGTGTGCTTTACAGACCTTTCCTCTTGGGCCCAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGTAAGAGCAGCGAGAGCTCTGTCTCAAAGACAGGTTTCAAGAACATTGGAGGCCGAAGGAACCTaGGAAACGAGCAGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: REVRAARALSQRQVSRTLEAEGT*ETSSSA Trigger: GGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTC...CAATGTTCTTGAAACCTGTCTTTGAGACAGAGCTCTCGCTGCTCTTACCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS TCA 90 bp | GTTGACATCAGTTCTGTCTGCAATCCACCGGGCAATCTGCTCAGCTaGAAACCCTCGCACCTGCAACTCATATGTATCAGCCCTTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VDISSVCNPPGNLLS*KPSHLQLICISPFG Trigger: CCCAAAAGGGCTGATACATATGAGTTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGATTGCAGACAGAACTGATGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | CCACGGGAGGCACCAGCAGCTAGAGATAACACAGTAGGAGTGTTGCCCAGTTCATATGTATCAGCCCTTTaGGGTTTTCCTTTCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PREAPAARDNTVGVLPSSYVSAL*GFPFGG Trigger: TCCTCCGAAAGGAAAACCCAAAAGGGCTGATACATA...TGAACTGGGCAACACTCCTACTGTGTTATCTCTAGCTGCTGGTGCCTCCCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGCACTTGAGAAGCTGAGACAGGAGGATGAATGTGAGCTGAAGGCGGGATATGTATCAGCCCTTTaGGGTTTTCCTTTCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPALEKLRQEDECELKAGYVSAL*GFPFGG Trigger: TCCTCCGAAAGGAAAACCCAAAAGGGCTGATACATA...TCCCGCCTTCAGCTCACATTCATCCTCCTGTCTCAGCTTCTCAAGTGCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCCTTGCAAACGACACATaGTCTATGAAGTTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLSALALSSTPSLLPSLLANDT*SMKLES Trigger: GCTCTCCAACTTCATAGACAATGTGTCGTTTGCAAG...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACCACAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTGGCAAACCACCTTTCGGAGGAAAGTaGATGAAAGTTGGAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ADHKLTELSLHLPQPGKPPFGGK*MKVGAE Trigger: TTCAGCTCCAACTTTCATCAACTTTCCTCCGAAAGG...TGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTGTGGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCCCTTTCGGAGGAAAGTaGATGAAAGTTGGAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSALALSSTPSLLPSLPFGGK*MKVGAE Trigger: TTCAGCTCCAACTTTCATCAACTTTCCTCCGAAAGG...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS GCA 90 bp | ACTCTAATGTTGACATCAGTTCTGTCTGCAATCCACCGGGCAATCTaGTCAGCTGAAAACCCTCGCACCTGCAACTCATATGTATCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLMLTSVLSAIHRAI*SAENPRTCNSYVSA Trigger: GGCTGATACATATGAGTTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGATTGCAGACAGAACTGATGTCAACATTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAACATCTCCTTCTTTCTTaGGGCAGAGGCCGAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AFIYHSLANHFISVPRQQHLLLS*GRGRRN Trigger: GTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGATG...TTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
||
| CDS-3UTR CAA 90 bp | CACCCATACCCGGCTTATGTGATGTTGTGGTTTGAACCCATGGCTAGGCAAGCACTTGCAAACGACACATaGTCTATGAAGTTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPYPAYVMLWFEPMARQALANDT*SMKLES Trigger: GCTCTCCAACTTCATAGACAATGTGTCGTTTGCAAG...TGCTTGCCTAGCCATGGGTTCAAACCACAACATCACATAAGCCGGGTATGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | CACCCATACCCGGCTTATGTGATGTTGTGGTTTGAACCCATGGCTAGGCAAGCATATGTATCAGCCCTTTaGGGTTTTCCTTTCGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: HPYPAYVMLWFEPMARQAYVSAL*GFPFGG Trigger: TCCTCCGAAAGGAAAACCCAAAAGGGCTGATACATA...TGCTTGCCTAGCCATGGGTTCAAACCACAACATCACATAAGCCGGGTATGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | GCTGACCACAAACTCACAGAGCTCAGCCTTCATCTACCACAGCCTGGCAAACCAACAAGACGACGGAACTaGTCTCCATTCATTCTTATT | + |
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Preference number: 5 (lower is better) Translates to: ADHKLTELSLHLPQPGKPTRRRN*SPFILI Trigger: AATAAGAATGAATGGAGACAAGTTCCGTCGTCTTGT...TGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGCTCTGTGAGTTTGTGGTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCACAAGACGACGGAACTaGTCTCCATTCATTCTTATT | + |
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Preference number: 5 (lower is better) Translates to: SLLSALALSSTPSLLPSLTRRRN*SPFILI Trigger: AATAAGAATGAATGGAGACAAGTTCCGTCGTCTTGT...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | AGCCTTTTAAGTGCTCTAGCACTGAGCTCCACTCCAAGCCTCCTGCCTTCTCTCACATTGTCTATGAAGTaGGAGAGCAGTAAACATGAC | + |
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Preference number: 5 (lower is better) Translates to: SLLSALALSSTPSLLPSLTLSMK*ESSKHD Trigger: GTCATGTTTACTGCTCTCCAACTTCATAGACAATGT...GAGAGAAGGCAGGAGGCTTGGAGTGGAGCTCAGTGCTAGAGCACTTAAAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCGACACGGTCCATTTTCAGATGACACAGTGTATATGATACCTGGGCCCCCTTTCGGAGGAAAGTaGATGAAAGTTGGAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRRHGPFSDDTVYMIPGPPFGGK*MKVGAE Trigger: TTCAGCTCCAACTTTCATCAACTTTCCTCCGAAAGG...GGGCCCAGGTATCATATACACTGTGTCATCTGAAAATGGACCGTGTCGCCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCGACACGGTCCATTTTCAGATGACACAGTGTATATGATACCTGGGCCCTATGTATCAGCCCTTTaGGGTTTTCCTTTCGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: QRRHGPFSDDTVYMIPGPYVSAL*GFPFGG Trigger: TCCTCCGAAAGGAAAACCCAAAAGGGCTGATACATA...GGGCCCAGGTATCATATACACTGTGTCATCTGAAAATGGACCGTGTCGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | TCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACAAATCAGTACATCTCCTTCTTTCTTaGGGCAGAGGCCGAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: STTAWQTISFLYLGNKSVHLLLS*GRGRRN Trigger: GTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGATG...TACTGATTTGTTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | CTAGGCAAGCACTATACCTCTGAGCCCCAGCCTCAGCTTGAAAACATGCTACTTACAAGACGACGGAACTaGTCTCCATTCATTCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LGKHYTSEPQPQLENMLLTRRRN*SPFILI Trigger: AATAAGAATGAATGGAGACAAGTTCCGTCGTCTTGT...AAGTAGCATGTTTTCAAGCTGAGGCTGGGGCTCAGAGGTATAGTGCTTGCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033583.14 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCACATTGTCTATGAAGTaGGAGAGCAGTAAACATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AQPSSTTAWQTISFLYLGTLSMK*ESSKHD Trigger: GTCATGTTTACTGCTCTCCAACTTCATAGACAATGT...GCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCTTCATCTACCACAGCCTGGCAAACCATTTCATTTCTGTACCTAGGCAACTTGCAAACGACACATaGTCTATGAAGTTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAFIYHSLANHFISVPRQLANDT*SMKLES Trigger: GCTCTCCAACTTCATAGACAATGTGTCGTTTGCAAG...TTGCCTAGGTACAGAAATGAAATGGTTTGCCAGGCTGTGGTAGATGAAGGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS TCA 90 bp | GACACATTGTCTATGAAGTTGGAGAGCAGTAAACATGACGACAACTaGGTAATTTCTCGGTGGAGCTTTAACAAGACGACGGAACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DTLSMKLESSKHDDN*VISRWSFNKTTELV Trigger: GACAAGTTCCGTCGTCTTGTTAAAGCTCCACCGAGAAATTACTCAGTTGTCGTCATGTTTACTGCTCTCCAACTTCATAGACAATGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS TCA 90 bp | CCATTCATTCTTATTACAGGTCTCTTATTGGCCCATTCCATCAGCTaGCTAACCTTCTCAGATAACACCATCTCCTTCTTTCTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PFILITGLLLAHSIS*LTFSDNTISFFLWA Trigger: TGCCCAAAGAAAGAAGGAGATGGTGTTATCTGAGAAGGTTAGTCAGCTGATGGAATGGGCCAATAAGAGACCTGTAATAAGAATGAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTACTTCTGAATGTGTAAAAGGAGGCATATATGTAGCTGATTTCAGGTGGCCTTTCGGAGGAAAGTaGATGAAAGTTGGAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGTSECVKGGIYVADFRWPFGGK*MKVGAE Trigger: TTCAGCTCCAACTTTCATCAACTTTCCTCCGAAAGG...CCACCTGAAATCAGCTACATATATGCCTCCTTTTACACATTCAGAAGTACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | ATGATTGTGTTTTCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGCTTGCAAACGACACATaGTCTATGAAGTTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MIVFSHSSKGVLSMNTTQLANDT*SMKLES Trigger: GCTCTCCAACTTCATAGACAATGTGTCGTTTGCAAG...CTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGAAAACACAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS-3UTR CAA 90 bp | ATGATTGTGTTTTCTCATTCTTCTAAGGGAGTCCTTTCCATGAACACAACTCAGACATTGTCTATGAAGTaGGAGAGCAGTAAACATGAC | + |
|
Preference number: 5 (lower is better) Translates to: MIVFSHSSKGVLSMNTTQTLSMK*ESSKHD Trigger: GTCATGTTTACTGCTCTCCAACTTCATAGACAATGT...CTGAGTTGTGTTCATGGAAAGGACTCCCTTAGAAGAATGAGAAAACACAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS TCA 72 bp | CGAAACTTTCTTCCAGCACGGTCCGAGGGTGGGGCGTaGGAACGGGCGAACCGAGCCCTTGCCGCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RNFLPARSEGGA*ERANRALAAPH Trigger: ATGGGGAGCGGCAAGGGCTCGGTTCGCCCGTTCTCACGCCCCACCCTCGGACCGTGCTGGAAGAAAGTTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033583.14 ENSMUST00000238718.2 |
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| CDS CCA 72 bp | TCTCCTTCTTTCTTTGGGCAGAGGCCGAAGGAACCTTaGAAACGAGCAGCAGTGCCACCGCTGCGATCGCAC | + |
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Preference number: 6 (lower is better) Translates to: SPSFFGQRPKEP*KRAAVPPLRSH Trigger: GTGCGATCGCAGCGGTGGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 72 bp | ATCTCCTTCTTTCTTTGGGCAGAGGCCGAAGGAACCTaGGAAACGAGCAGCAGTGCCACCGCTGCGATCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISFFLWAEAEGT*ETSSSATAAIA Trigger: TGCGATCGCAGCGGTGGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 90 bp | GATAACACCATCTCCTTCTTTCTTTGGGCAGAGGCCGAAGGAACCTaGGAAACGAGCAGCAGTGCCACCGCTGCGATCGCACACACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DNTISFFLWAEAEGT*ETSSSATAAIAHTD Trigger: GTCTGTGTGTGCGATCGCAGCGGTGGCACTGCTGCTCGTTTCCAAGGTTCCTTCGGCCTCTGCCCAAAGAAAGAAGGAGATGGTGTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS GCA 72 bp | GAACGATGTGGGTTTCAGCTACAAACTGGGCCTGGCTaGTCCCGTGGATGTAATTCACGTGTCCTGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ERCGFQLQTGPG*SRGCNSRVLCG Trigger: CCCACACAGGACACGTGAATTACATCCACGGGAGCAGCCAGGCCCAGTTTGTAGCTGAAACCCACATCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS TCA 72 bp | AGTTCTGTCTGCAATCCACCGGGCAATCTGCTCAGCTaGAAACCCTCGCACCTGCAACTCATATGTATCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSVCNPPGNLLS*KPSHLQLICIS Trigger: GCTGATACATATGAGTTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGATTGCAGACAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS GCA 72 bp | TTGACATCAGTTCTGTCTGCAATCCACCGGGCAATCTaGTCAGCTGAAAACCCTCGCACCTGCAACTCATAT | + |
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Preference number: 6 (lower is better) Translates to: LTSVLSAIHRAI*SAENPRTCNSY Trigger: ATATGAGTTGCAGGTGCGAGGGTTTTCAGCTGAGCAGATTGCCCGGTGGATTGCAGACAGAACTGATGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 90 bp | TCAGCTGAAAACCCTCGCACCTGCAACTCATATGTATCAGCCCTTTaGGGTTTTCCTTTCGGAGGAAAGTTGATGAAAGTTGGAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SAENPRTCNSYVSAL*GFPFGGKLMKVGAE Trigger: TTCAGCTCCAACTTTCATCAACTTTCCTCCGAAAGGAAAACCCAAAAGGGCTGATACATATGAGTTGCAGGTGCGAGGGTTTTCAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 90 bp | AAAGCTGCAAAAGCCCATCCAGTTTTATTAAAGAGGAACTCCATATaGCTTCTTCGCAGATACACAAGTCCACCAATAACAGCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAAKAHPVLLKRNSI*LLRRYTSPPITASS Trigger: GCTGCTGGCTGTTATTGGTGGACTTGTGTATCTGCGAAGAAGCAATATGGAGTTCCTCTTTAATAAAACTGGATGGGCTTTTGCAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS TCA 72 bp | TCTATGAAGTTGGAGAGCAGTAAACATGACGACAACTaGGTAATTTCTCGGTGGAGCTTTAACAAGACGACG | + |
|
Preference number: 6 (lower is better) Translates to: SMKLESSKHDDN*VISRWSFNKTT Trigger: CGTCGTCTTGTTAAAGCTCCACCGAGAAATTACTCAGTTGTCGTCATGTTTACTGCTCTCCAACTTCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS TCA 72 bp | TCTTCATCAGCTTGCTTGCAAACGACACATTGTCTATaGAGTTGGAGAGCAGTAAACATGACGACAACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSACLQTTHCL*SWRAVNMTTTE Trigger: CTCAGTTGTCGTCATGTTTACTGCTCTCCAACTTCATAGACAATGTGTCGTTTGCAAGCAAGCTGATGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 72 bp | CTGGAATTCTTCATCAGCTTGCTTGCAAACGACACATaGTCTATGAAGTTGGAGAGCAGTAAACATGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: LEFFISLLANDT*SMKLESSKHDD Trigger: GTCGTCATGTTTACTGCTCTCCAACTTCATAGACAATGTGTCGTTTGCAAGCAAGCTGATGAAGAATTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 72 bp | GTATCAGCCCTTTTGGGTTTTCCTTTCGGAGGAAAGTaGATGAAAGTTGGAGCTGAATTCATGTTTAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: VSALLGFPFGGK*MKVGAEFMFSI Trigger: AATGCTAAACATGAATTCAGCTCCAACTTTCATCAACTTTCCTCCGAAAGGAAAACCCAAAAGGGCTGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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| CDS CAA 72 bp | AAAGCCCATCCAGTTTTATTAAAGAGGAACTCCATATaGCTTCTTCGCAGATACACAAGTCCACCAATAACA | + |
|
Preference number: 6 (lower is better) Translates to: KAHPVLLKRNSI*LLRRYTSPPIT Trigger: TGTTATTGGTGGACTTGTGTATCTGCGAAGAAGCAATATGGAGTTCCTCTTTAATAAAACTGGATGGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033583.14 ENSMUST00000113566.10 ENSMUST00000139421.3 ENSMUST00000151689.9 ENSMUST00000238718.2 |
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