RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAGEL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056972

Ensembl transcript IDs: ENSMUST00000080403.7

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTaGTACTGTAACATTACAATTAGTACACCAAACAGGGAATCACAG +
Preference number: 1 (lower is better)
Translates to: TNKLSFLFTHKAAQL*YCNITISTPNRESQ
Trigger: CTGTGATTCCCTGTTTGGTGTACTAATTGTAATGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
3UTR-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATATTGTCTTTTGCCTTTaGCTTTGGACCCACAAGTAT +
Preference number: 2 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDIVFCL*LWTHKY
Trigger: ATACTTGTGGGTCCAAAGCCAAAGGCAAAAGACAAT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
3UTR-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTTTTTGCCTTTGGCTTTaGACCCACAAGTATAAAAAT +
Preference number: 2 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTFCLWL*THKYKN
Trigger: ATTTTTATACTTGTGGGTCCAAAGCCAAAGGCAAAA...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
3UTR-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACATTGTCTTTTGCCTTaGGCTTTGGACCCACAAGTA +
Preference number: 3 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTHCLLP*ALDPQV
Trigger: TACTTGTGGGTCCAAAGCCAAAGGCAAAAGACAATG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
3UTR TCA 72 bp CTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTaGTACTGTAACATTACAATTAGTACACCAAACAGG +
Preference number: 3 (lower is better)
Translates to: LSFLFTHKAAQL*YCNITISTPNR
Trigger: CCTGTTTGGTGTACTAATTGTAATGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTACTGGGGCAGGCAGCTaGCCCTCCGGAGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSTGAGS*PSGASQ
Trigger: CTGGGAGGCTCCGGAGGGCCAGCTGCCTGCCCCAGT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGGCCAGCTGAGCCACTaGGGCAGGCAGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSGQLSH*GRQLAL
Trigger: GAGGGCCAGCTGCCTGCCCCAGTGGCTCAGCTGGCC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTGGAGCCTGCCGCAGTaGAGGTGGGGGTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDWSLPQ*RWGWQD
Trigger: GTCCTGCCACCCCCACCTCCACTGCGGCAGGCTCCA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACATGTGGCACCGGGGCCTaGCCTTTGGGGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTCGTGA*PLGACQ
Trigger: CTGGCAGGCCCCCAAAGGCCAGGCCCCGGTGCCACA...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGCCTCCCAGGCAGGTTaGGGAGCCTGCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTASQAG*GACQAA
Trigger: GGCTGCTTGGCAGGCTCCTCAACCTGCCTGGGAGGC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTCCACATGGGCGATCTaGGTGGCCTGCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDSTWAI*VACSWA
Trigger: GGCCCAGGAGCAGGCCACTCAGATCGCCCATGTGGA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCCCCCGCCAGTCACGTaGGGAGAGCCTGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSPPPVT*GEPVAT
Trigger: TGTGGCCACAGGCTCTCCTCACGTGACTGGCGGGGG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGCTCCAGGCTGGGCCTaGAACATGGGCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDAPGWA*NMGSGP
Trigger: AGGCCCACTGCCCATGTTGCAGGCCCAGCCTGGAGC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCCCGGAGTTGAAGACTaGGCCATGGGGGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDPGVED*AMGAPG
Trigger: TCCGGGAGCCCCCATGGCCCAGTCTTCAACTCCGGG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGGCAGCCTGTGGAGGTaGCTGGACCATCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDGSLWR*LDHRSS
Trigger: GGAGCTCCGATGGTCCAGCCACCTCCACAGGCTGCC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGCCAGTTGGGTGTGGTaGCTTGCCAGCCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDASWVW*LASLGV
Trigger: CACCCCCAGGCTGGCAAGCCACCACACCCAACTGGC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACTGCCGCAGTGGAGGTaGGGGTGGCAGGACCTGCCA +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTLPQWR*GWQDLP
Trigger: TGGCAGGTCCTGCCACCCCCACCTCCACTGCGGCAG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCACCGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTHRELL*HRELLW
Trigger: CCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCGCCAGCCCACTGCCTaGGCCTGCTGTACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSRQPTA*ACCTSW
Trigger: CCAGGAGGTACAGCAGGCCCAGGCAGTGGGCTGGCG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTGCAAGCCAGAGGCTTaGGCCTGGTGGGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDCKPEA*AWWVGS
Trigger: GCTGCCGACCCACCAGGCCCAAGCCTCTGGCTTGCA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGCAGTGGCACTTGCCTaGGGGGCAGCTGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTAVALA*GAAAAT
Trigger: GGTGGCAGCAGCTGCCCCCCAGGCAAGTGCCACTGC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACATTGGGTGTGGTGGCTTaGCAGCCTGGGGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTLGVVA*QPGGVA
Trigger: GGCCACACCCCCAGGCTGGCAAGCCACCACACCCAA...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTAGGAGGTACCTTGGGTaGCCGCCAGCCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTRRYLG*PPAHCL
Trigger: CAGGCAGTGGGCTGGCGGGCACCCAAGGTACCTCCT...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACCGTAGGGCGGCTATaGACTGCAGGCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDTVGRL*TAGTGD
Trigger: GTCCCCAGTGCCTGCAGTCCATAGCCGCCCTACGGT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACATTGAAGACTGGGCCATaGGGGCTCCCGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTLKTGP*GLPEGA
Trigger: AGCCCCCTCCGGGAGCCCCCATGGCCCAGTCTTCAA...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGCCTGTGGAGGTGGCTaGACCATCGGAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTACGGG*TIGAPG
Trigger: TCCGGGAGCTCCGATGGTCCAGCCACCTCCACAGGC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGGTGGCTTGCCAGCCTaGGGGTGTGGCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSGGLPA*GCGQLY
Trigger: GTACAGCTGGCCACACCCCCAGGCTGGCAAGCCACC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGTTGCTGGCCACCCCTaGGGGGTCACCTGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTVAGHP*GVTCQL
Trigger: CAACTGGCAGGTGACCCCCCAGGGGTGGCCAGCAAC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACAGTGGAGGTGGGGGTaGCAGGACCTGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTQWRWG*QDLPQL
Trigger: CAGCTGTGGCAGGTCCTGCCACCCCCACCTCCACTG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACACTGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTHWELL*HRELLW
Trigger: CCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAGCTCTTGTGGCACTaGGAGCTCCTGTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDELLWH*ELLWHR
Trigger: CCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCATGGGCGATCTGAGTaGCCTGCTCCTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDHGRSE*PAPGPP
Trigger: AGGAGGCCCAGGAGCAGGCCACTCAGATCGCCCATG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGCAGAGGCTCCAGGCTaGGCCTGCAACATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDAEAPG*ACNMGS
Trigger: ACTGCCCATGTTGCAGGCCCAGCCTGGAGCCTCTGC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACAGGCTGCCAGAAGTaGGGAGGTACCTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDTGCQK*GGTLGA
Trigger: GGCACCCAAGGTACCTCCTCACTTCTGGCAGCCTGT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGCGTCTTGGCGGCTCTaGAGACTTAGAGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDASWRL*RLRGLC
Trigger: GCAGAGGCCTCTAAGTCTTCAGAGCCGCCAAGACGC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTGGCCTTTGGGGGCCTaGCAGATGATGGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDWPLGA*QMMGGQ
Trigger: TTGCCCACCCATCATCTGGCAGGCCCCCAAAGGCCA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAAGGCAGTTCTGCCTaGAAGCCAGAGGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDEGSSA*KPEAWA
Trigger: GGCCCAAGCCTCTGGCTTGCAGGCAGAACTGCCTTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGCCCCGGGGAAAGTTTaGCAGTGTGGCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTAPGKV*QCGRGS
Trigger: GGAGCCTCTGCCACACTGGCAAACTTTCCCCGGGGC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCGGAACCCAGGGAACTaGAGGCAGGGCCTCTACGCA +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTRNPGN*RQGLYA
Trigger: TGCGTAGAGGCCCTGCCTGCAGTTCCCTGGGTTCCG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCAGAATGACTGGGATTaGCCCAGGTTCGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTQNDWD*PRFGAP
Trigger: GGGGGCCCCGAACCTGGGGCAATCCCAGTCATTCTG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAATGGACTGCAGGCACTaGGGACTCCGGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTMDCRH*GLRRAG
Trigger: TCCAGCCCTCCGGAGTCCCCAGTGCCTGCAGTCCAT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCCTGCCAAGCAGCCATaGGAGCCTGCAAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDPAKQP*EPASPL
Trigger: CAGTGGACTTGCAGGCTCCCATGGCTGCTTGGCAGG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCCCGGTGTCAGCTGCTaGGCCATCAGGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSPGVSC*AIRTPG
Trigger: TCCAGGAGTCCTGATGGCCCAGCAGCTGACACCGGG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCACGACACCAGGACCTaGAGGCTTGGCCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDHDTRT*RLGHRS
Trigger: ACTCCGATGGCCAAGCCTCCAGGTCCTGGTGTCGTG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACAAAGGCTGACCCTGTaGGGCCCAAGTGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTQRLTL*GPSGQR
Trigger: CCTCTGGCCACTTGGGCCCCACAGGGTCAGCCTTTG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCCTGCCAGGCTATTGTaGGGGCCTGCCAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSPARLL*GPARSP
Trigger: AGGTGACCTGGCAGGCCCCCACAATAGCCTGGCAGG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAACCGGGACCTCTTGTaGCACCGGGAGCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTNRDLL*HRELLW
Trigger: CCACAGGAGCTCCCGGTGCCACAAGAGGTCCCGGTT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAACCGGGAGCTCCTGTaGCACCGGGATCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTNRELL*HRDLLW
Trigger: CCACAGGAGATCCCGGTGCCACAGGAGCTCCCGGTT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACACCGGGAGCTCTTGTaGCACTGGGAGCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTHRELL*HWELLW
Trigger: CCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCACTGGGAGCTCCTGTaGCACCGGGAGCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTHWELL*HRELLW
Trigger: CCACAAGAGCTCCCGGTGCCACAGGAGCTCCCAGTG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAGTGAGGAGGTACCTTaGGTGCCCGCCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTSEEVP*VPASPL
Trigger: CAGTGGGCTGGCGGGCACCCAAGGTACCTCCTCACT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTGCCTTGGAGGAGGCTaGAGCTCCCTGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDCLGGG*SSLKGL
Trigger: CAGCCCTTTCAGGGAGCTCCAGCCTCCTCCAAGGCA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACCATCGGGGCTCCATaGGTGAGAGGATGCACCATC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDTIGAP*VRGCTI
Trigger: GATGGTGCATCCTCTCACTCATGGAGCCCCGATGGT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGCAGCCATGGGAGCCTaGAAGTCCACTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSAAMGA*KSTGGG
Trigger: TCCACCTCCAGTGGACTTGCAGGCTCCCATGGCTGC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTACTCCCGGTGTCAGCTaGTGGGCCATCAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSTPGVS*WAIRTP
Trigger: AGGAGTCCTGATGGCCCAGCAGCTGACACCGGGAGT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGCTATTGTGGGGGCCTaGCAGGTCACCTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSAIVGA*QVTCVA
Trigger: GGCTACACAGGTGACCTGGCAGGCCCCCACAATAGC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCAGCTGAGTTTGCAGTaGCTTGGAGGAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDQLSLQ*LGGGWS
Trigger: GCTCCAGCCTCCTCCAAGGCACTGCAAACTCAGCTG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAGTGAGGATGGGGACTaGTGGTGGGGTCGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTSEDGD*WWGRGH
Trigger: ATGCCCACGACCCCACCAGCAGTCCCCATCCTCACT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCAAGTCCACTGGAGGTaGATCCCAGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTQVHWR*IPGDRR
Trigger: CCTCCTGTCCCCTGGGATCCACCTCCAGTGGACTTG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTAGCCTGCAAGTCCACTaGAGGTGGATCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSSLQVH*RWIPGD
Trigger: GTCCCCTGGGATCCACCTCCAGTGGACTTGCAGGCT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCAGGACTCCTGGAGTTaGCTGCTGGGCTATCGGTGT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDQDSWS*LLGYRC
Trigger: ACACCGATAGCCCAGCAGCCAACTCCAGGAGTCCTG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGGCCATCAGGACTCCTaGAGTTGGCTGCTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDGHQDS*SWLLGY
Trigger: ATAGCCCAGCAGCCAACTCCAGGAGTCCTGATGGCC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACATCAAGGCAGCCTGTaGAGGTGGCTGGACCATCGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTHQGSL*RWLDHR
Trigger: CCGATGGTCCAGCCACCTCCACAGGCTGCCTTGATG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCTGCCAGATGATGGGTaGGCAATGCACAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTLPDDG*AMHSPG
Trigger: CCCCGGACTGTGCATTGCCCACCCATCATCTGGCAG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCTCCTGGAACTCCAATaGCACCGGGAGCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSLLELQ*HRELLW
Trigger: CCACAGGAGCTCCCGGTGCCATTGGAGTTCCAGGAG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAGTTTGCAGTGCCTTaGAGGAGGCTGGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDEFAVP*RRLELP
Trigger: AGGGAGCTCCAGCCTCCTCCAAGGCACTGCAAACTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAAAGTTTGCCAGTGTaGCAGAGGCTCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDESLPV*QRLQAG
Trigger: CCCAGCCTGGAGCCTCTGCCACACTGGCAAACTTTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTCCCCGAGAGACGCTTaGGACCTCAGAAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDSPRDA*DLRSHP
Trigger: TGGATGGCTTCTGAGGTCCCAAGCGTCTCTCGGGGA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCCAAAGGGGCCCCCGTaGCAGAAGGATGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTPKGPP*QKDVAS
Trigger: TGATGCTACATCCTTCTGTCACGGGGGCCCCTTTGG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAGGCTGCAGCTGCACTaGAGGCAGTTCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTRLQLH*RQFCLQ
Trigger: TTGCAGGCAGAACTGCCTTCAGTGCAGCTGCAGCCT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATAAGGGAGATAAGGGCTaGCTCTCCCTATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDKGDKG*LSLSGS
Trigger: GGACCCTGATAGGGAGAGTCAGCCCTTATCTCCCTT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCCTTGCCAAGAAGGCTaGAGCTGCACTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDPCQEG*SCTEGS
Trigger: ACTGCCTTCAGTGCAGCTGCAGCCTTCTTGGCAAGG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCTGGCACCTGGAGGATaGATCATCACGACACCAGGA +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDLAPGG*IITTPG
Trigger: TCCTGGTGTCGTGATGATCCATCCTCCAGGTGCCAG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACTGTCGGATCAGTGGTaGGGCTTGCCTCATCACAGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTLSDQW*GLPHHR
Trigger: CCTGTGATGAGGCAAGCCCCACCACTGATCCGACAG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGATAGACAGTTGGGCTaGCAGTACTGTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDDRQLG*QYCLGH
Trigger: GTGCCCCAGACAGTACTGCCAGCCCAACTGTCTATC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGCTTCTTCTTCCTGGTaGCTTTGCCGGGGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTASSSW*LCRGVL
Trigger: CAAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGATGCTTCTTCTTCCTaGTGGCTTTGCCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTDASSS*WLCRGV
Trigger: GACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACCCAGTCAGAATGACTaGGATTGCCCCAGGTTCGGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTPSQND*DCPRFG
Trigger: CCCGAACCTGGGGCAATCCCAGTCATTCTGACTGGG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATAGACCACTTGTCTCCTaGACATCCAGCCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDRPLVS*TSSPSW
Trigger: CCAGCTAGGGCTGGATGTCCAGGAGACAAGTGGTCT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAGGCAGGCTGGAAATaGGAGGTAGATGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDEAGWK*EVDGKT
Trigger: GGTCTTTCCATCTACCTCTCATTTCCAGCCTGCCTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGTCAAGGTACTGGCATaGCCAGATCTGGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSVKVLA*PDLGLV
Trigger: AACCAGCCCCAGATCTGGTCATGCCAGTACCTTGAC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCAAGAAGGCTGCAGCTaGACTGAAGGCAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSQEGCS*TEGSSA
Trigger: GGCAGAACTGCCTTCAGTGCAGCTGCAGCCTTCTTG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGCGAAGCAATGGAGCTaGTCCAGGTCGAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTAKQWS*SRSNGC
Trigger: ACACCCATTCGACCTGGACCAGCTCCATTGCTTCGC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGCCCTCCAAGCTCCTTaGCATCCTAGAAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTALQAP*HPRSVG
Trigger: CCCAACACTTCTAGGATGCCAAGGAGCTTGGAGGGC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAGATGGAAAGACCCTTaGGGTGGCAGGAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTRWKDP*GGRKGL
Trigger: GAGACCTTTCCTGCCACCTCAAGGGTCTTTCCATCT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAATCTCCCAGTCAGAATaGCTGGGATTGCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTISQSE*LGLPQV
Trigger: AACCTGGGGCAATCCCAGTCATTCTGACTGGGAGAT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTACCCTTTTTGTCCCTTaGAGGTGCCCTACGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSTLFVP*RCPTFP
Trigger: AGGGAACGTAGGGCACCTGCAAGGGACAAAAAGGGT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTATGCCATGTGGAGCTaGTCTGATAGGGACCTGTCG +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSYAMWS*SDRDLS
Trigger: CGACAGGTCCCTATCAGACCAGCTCCACATGGCATA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCGTGAGGAGAGCCTGTaGCCACAGTTGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSREESL*PQLSSL
Trigger: CAAAGAAGACAACTGTGGCCACAGGCTCTCCTCACG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTATACTGGAGTCTGAATaGTTGGACCTCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTILESE*LDLWHL
Trigger: CAGGTGCCAGAGGTCCAATCATTCAGACTCCAGTAT...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGGAGCCCTTATGACTTaGGACTGGATTTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDGALMT*DWICRI
Trigger: GATCCTACAAATCCAGTCTCAAGTCATAAGGGCTCC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATAGAAAGTGGCACCAATaGACATGCGCTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDRKWHQ*TCALLE
Trigger: CTCCAAAAGAGCGCATGTTCATTGGTGCCACTTTCT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGGCAGGAAAGGTCTCTaGTGTGGCAGGCAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTGRKGL*CGRQVF
Trigger: AAAAACTTGCCTGCCACATCAGAGACCTTTCCTGCC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACCACCATCAGGAGGCTaGACTTTGGCCTCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTPPSGG*TLASLN
Trigger: ATTTAGAGAGGCCAAAGTTCAGCCTCCTGATGGTGG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATTCAGTGAACGGGATTTaGCTGTACTCTAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDSVNGI*LYSRYL
Trigger: CAGGTACCTAGAGTACAGGCAAATCCCGTTCACTGA...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTACAGAGGGAACCTGTaGAGGAGCCCTTATGACTTG +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSYRGNL*RSPYDL
Trigger: CAAGTCATAAGGGCTCCTCCACAGGTTCCCTCTGTA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTATCTGGCGAAGCAATaGAGCTGGTCCAGGTCGAAT +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSYLAKQ*SWSRSN
Trigger: ATTCGACCTGGACCAGCTCCATTGCTTCGCCAGATA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACATATCTGAGCAACTGGTaGTACTGTAGACACCTGGCC +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTYLSNW*YCRHLA
Trigger: GGCCAGGTGTCTACAGTACCACCAGTTGCTCAGATA...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAAAGGTCTCTGATGTaGCAGGCAAGTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDERSLM*QASFSR
Trigger: CCTGGAAAAACTTGCCTGCCACATCAGAGACCTTTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGTGGAGGAGCCCTTATaGCTTGAGACTGGATTTGTA +
Preference number: 4 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTVEEPL*LETGFV
Trigger: TACAAATCCAGTCTCAAGTCATAAGGGCTCCTCCAC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR TCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGGCACCAAATGTATCTaGGCAACTGGTGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSGTKCI*ATGGTV
Trigger: TACAGTACCACCAGTTGCTCAGATACATTTGGTGCC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTCTTTGGGTTCCAGATaGTTCTTCTTCCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSSLGSR*FFFLVA
Trigger: AGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATATGTATCTGAGCAACTaGTGGTACTGTAGACACCTG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDMYLSN*WYCRHL
Trigger: CAGGTGTCTACAGTACCACCAGTTGCTCAGATACAT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTACAGGCACCTTGGCTTaGTCTTTGACCAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSTGTLA*SLTKRN
Trigger: GTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACATCCAGCCCTAGCTaGAACAGAAAACTAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDTSSPS*NRKLKS
Trigger: GCTCTTTAGTTTTCTGTTCCAGCTAGGGCTGGATGT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTTGACCAAGAGAAACTaGACCAAAGCGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSLTKRN*TKAFAL
Trigger: GAGAGCAAACGCTTTGGTGCAGTTTCTCTTGGTCAA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR GCA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATAAAAATCTCAAGATGTaGACCCTGTTGGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDKNLKM*TLLVSR
Trigger: CCTCGAAACCAACAGGGTGCACATCTTGAGATTTTT...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp TTGTGGCACCGGGAGCTCCTGTGGCACCGGGAGCTCCTGTGGCACTaGGAGCTCCTGTGGCACCGGGGCCTGGCCTTTGGGGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: LWHRELLWHRELLWH*ELLWHRGLAFGGLP
Trigger: TGGCAGGCCCCCAAAGGCCAGGCCCCGGTGCCACAGGAGCTCCCAGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GACCTCTTGTGGCACCGGGAGCTCCTGTGGCACCGGGAGCTCCTGTaGCACTGGGAGCTCCTGTGGCACCGGGGCCTGGCCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: DLLWHRELLWHRELL*HWELLWHRGLAFGG
Trigger: GCCCCCAAAGGCCAGGCCCCGGTGCCACAGGAGCTCCCAGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAAGAGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp CCAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGGTaGGCCATCGAGGTCCCGGGAGGGTGTGTCATCGGGGTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: PGGGGGGGGGGGGGG*AIEVPGGCVIGVPG
Trigger: CCCAGGAACCCCGATGACACACCCTCCCGGGACCTCGATGGCGCACCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGCTCCTGTGGCACCGGGAGCTCTTGTGGCACTGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGGAACCGGGAGCTCCTGTGGCACCGG +
Preference number: 5 (lower is better)
Translates to: ELLWHRELLWHWELL*HRELLWNRELLWHR
Trigger: CCGGTGCCACAGGAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTGCCACAGGAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGCTCCTGTGGCACCGGGAGCTCCTGTGGCACCGGGAGCTCCTGTaGCACTGGGAGCTCCTGTGGCACCGGGAGCTCTTGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: ELLWHRELLWHRELL*HWELLWHRELLWHW
Trigger: CCAGTGCCACAAGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAACTCCAATGGCACCGGGAGCTCCTGTGGCACCGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGGCACTGGGAGCTCCTGTGGCACCGG +
Preference number: 5 (lower is better)
Translates to: ELQWHRELLWHRELL*HRELLWHWELLWHR
Trigger: CCGGTGCCACAGGAGCTCCCAGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCATTGGAGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp CGGGAGGAAGCAGGCGGAGCCCGCATCAGAACCGTAGGGCGGCTATaGACTGCAGGCACTGGGGACTCCGGAGGGCTGGAATCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: REEAGGARIRTVGRL*TAGTGDSGGLESPR
Trigger: TCTGGGGGATTCCAGCCCTCCGGAGTCCCCAGTGCCTGCAGTCCATAGCCGCCCTACGGTTCTGATGCGGGCTCCGCCTGCTTCCTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp AGGAGCCTGCCAAGCAGCCATGGGAGCCTGCAAGTCCACTGGAGGTaGATCCCAGGGGACAGGAGGAGCCCGGGAGGAAGCAGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RSLPSSHGSLQVHWR*IPGDRRSPGGSRRS
Trigger: GCTCCGCCTGCTTCCTCCCGGGCTCCTCCTGTCCCCTGGGATCCACCTCCAGTGGACTTGCAGGCTCCCATGGCTGCTTGGCAGGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GATCTCCTGTGGAACCGGGACCTCTTGTGGCACCGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGGCACTGGGAGCTCCTGTGGCACCGG +
Preference number: 5 (lower is better)
Translates to: DLLWNRDLLWHRELL*HRELLWHWELLWHR
Trigger: CCGGTGCCACAGGAGCTCCCAGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAAGAGGTCCCGGTTCCACAGGAGATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGCTCCTGTGGCACCGGGAGCTCCTGTGGAACCGGGAGCTCCTGTaGCACCGGGATCTCCTGTGGCACCGGGATCTCCTGTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: ELLWHRELLWNRELL*HRDLLWHRDLLWNR
Trigger: CCGGTTCCACAGGAGATCCCGGTGCCACAGGAGATCCCGGTGCCACAGGAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGCTCTTGTGGCACTGGGAGCTCCTGTGGCACCGGGAGCTCCTGTaGAACCGGGAGCTCCTGTGGCACCGGGATCTCCTGTGGCACCGG +
Preference number: 5 (lower is better)
Translates to: ELLWHWELLWHRELL*NRELLWHRDLLWHR
Trigger: CCGGTGCCACAGGAGATCCCGGTGCCACAGGAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp CTGTGGCACTGGGAGCTCCTGTGGCACCGGGAGCTCTTGTGGCACTaGGAGCTCCTGTGGCACCGGGAGCTCCTGTGGAACCGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: LWHWELLWHRELLWH*ELLWHRELLWNREL
Trigger: GAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGCTCCTGTGGCACTGGGAGCTCCTGTGGCACCGGGAGCTCTTGTaGCACTGGGAGCTCCTGTGGCACCGGGAGCTCCTGTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: ELLWHWELLWHRELL*HWELLWHRELLWNR
Trigger: CCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAGGAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp CCTCCGGAGCCTCCCAGGCAGGTTGAGGAGCCTGCCAAGCAGCCATaGGAGCCTGCAAGTCCACTGGAGGTGGATCCCAGGGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: PPEPPRQVEEPAKQP*EPASPLEVDPRGQE
Trigger: CTCCTGTCCCCTGGGATCCACCTCCAGTGGACTTGCAGGCTCCCATGGCTGCTTGGCAGGCTCCTCAACCTGCCTGGGAGGCTCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGCTCCTGTGGAACCGGGAGCTCCTGTGGCACCGGGATCTCCTGTaGCACCGGGATCTCCTGTGGAACCGGGACCTCTTGTGGCACCGG +
Preference number: 5 (lower is better)
Translates to: ELLWNRELLWHRDLL*HRDLLWNRDLLWHR
Trigger: CCGGTGCCACAAGAGGTCCCGGTTCCACAGGAGATCCCGGTGCCACAGGAGATCCCGGTGCCACAGGAGCTCCCGGTTCCACAGGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp GGAAGCAGGCGGAGCCCGCATCAGAACCGTAGGGCGGCTATGGACTaGAGGCACTGGGGACTCCGGAGGGCTGGAATCCCCCAGATTCGT +
Preference number: 5 (lower is better)
Translates to: GSRRSPHQNRRAAMD*RHWGLRRAGIPQIR
Trigger: ACGAATCTGGGGGATTCCAGCCCTCCGGAGTCCCCAGTGCCTGCAGTCCATAGCCGCCCTACGGTTCTGATGCGGGCTCCGCCTGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GTCACCTGTGTAGCCTGCCATGTCAAAGGCGTTGCTGGCCACCCCTaGGGGGTCACCTGCCAGTTGGGTGTGGTGGCTTGCCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VTCVACHVKGVAGHP*GVTCQLGVVACQPG
Trigger: CCCAGGCTGGCAAGCCACCACACCCAACTGGCAGGTGACCCCCCAGGGGTGGCCAGCAACGCCTTTGACATGGCAGGCTACACAGGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GTGGAGCCCCGGGGAAAGTTTGCCAGTGTGGCAGAGGCTCCAGGCTaGGCCTGCAACATGGGCAGTGGGCCTTGCCAAGAAGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VEPRGKFASVAEAPG*ACNMGSGPCQEGCS
Trigger: GCTGCAGCCTTCTTGGCAAGGCCCACTGCCCATGTTGCAGGCCCAGCCTGGAGCCTCTGCCACACTGGCAAACTTTCCCCGGGGCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp CAAGCCAGAGGCTTGGGCCTGGTGGGTCGGCAGCTGAGTTTGCAGTaGCTTGGAGGAGGCTGGAGCTCCCTGAAAGGGCTGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: QARGLGLVGRQLSLQ*LGGGWSSLKGLLLL
Trigger: GAGCAGCAGCAGCCCTTTCAGGGAGCTCCAGCCTCCTCCAAGGCACTGCAAACTCAGCTGCCGACCCACCAGGCCCAAGCCTCTGGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp CATCGGAGTAATCGAAGGTGCAGGCTGGGTCATCAAGGCAGCCTGTaGAGGTGGCTGGACCATCGGAGCTCCCGGAGCAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HRSNRRCRLGHQGSL*RWLDHRSSRSRRLD
Trigger: GTCCAGCCGCCTGCTCCGGGAGCTCCGATGGTCCAGCCACCTCCACAGGCTGCCTTGATGACCCAGCCTGCACCTTCGATTACTCCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp TGGGCCTGCAACATGGGCAGTGGGCCTTGCCAAGAAGGCTGCAGCTaGACTGAAGGCAGTTCTGCCTGCAAGCCAGAGGCTTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WACNMGSGPCQEGCS*TEGSSACKPEAWAW
Trigger: CCAGGCCCAAGCCTCTGGCTTGCAGGCAGAACTGCCTTCAGTGCAGCTGCAGCCTTCTTGGCAAGGCCCACTGCCCATGTTGCAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp CCAGGCTGGGCCTGCAACATGGGCAGTGGGCCTTGCCAAGAAGGCTaGAGCTGCACTGAAGGCAGTTCTGCCTGCAAGCCAGAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: PGWACNMGSGPCQEG*SCTEGSSACKPEAW
Trigger: CCAAGCCTCTGGCTTGCAGGCAGAACTGCCTTCAGTGCAGCTGCAGCCTTCTTGGCAAGGCCCACTGCCCATGTTGCAGGCCCAGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp CCAGGACCTGGAGGCTTGGCCATCGGAGTAATCGAAGGTGCAGGCTaGGTCATCAAGGCAGCCTGTGGAGGTGGCTGGACCATCGGAGCT +
Preference number: 5 (lower is better)
Translates to: PGPGGLAIGVIEGAG*VIKAACGGGWTIGA
Trigger: AGCTCCGATGGTCCAGCCACCTCCACAGGCTGCCTTGATGACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp CACGACACCAGGACCTGGAGGCTTGGCCATCGGAGTAATCGAAGGTaGAGGCTGGGTCATCAAGGCAGCCTGTGGAGGTGGCTGGACCAT +
Preference number: 5 (lower is better)
Translates to: HDTRTWRLGHRSNRR*RLGHQGSLWRWLDH
Trigger: ATGGTCCAGCCACCTCCACAGGCTGCCTTGATGACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGGTGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GGCGGCTCTGAAGACTTAGAGGCCTCTGCAGCAGTGGCACTTGCCTaGGGGGCAGCTGCTGCCACCATCAAGATGGCAGGCACTGACTTA +
Preference number: 5 (lower is better)
Translates to: GGSEDLEASAAVALA*GAAAATIKMAGTDL
Trigger: TAAGTCAGTGCCTGCCATCTTGATGGTGGCAGCAGCTGCCCCCCAGGCAAGTGCCACTGCTGCAGAGGCCTCTAAGTCTTCAGAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp CCTATCAGGGTCCTCCTGAGCAGCACTGGATCCCCGAGAGACGCTTaGGACCTCAGAAGCCATCCATGTCTGAGACCCACCCGAGTCACC +
Preference number: 5 (lower is better)
Translates to: PIRVLLSSTGSPRDA*DLRSHPCLRPTRVT
Trigger: GGTGACTCGGGTGGGTCTCAGACATGGATGGCTTCTGAGGTCCCAAGCGTCTCTCGGGGATCCAGTGCTGCTCAGGAGGACCCTGATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 90 bp GCCTGCCAGATGATGGGTGGGCAATGCACAGTCCGGGGAGCAGACTaGGCAGCAGCCTGGGGTACAGGAATTGGGATAGACAGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: ACQMMGGQCTVRGAD*AAAWGTGIGIDSWA
Trigger: AGCCCAACTGTCTATCCCAATTCCTGTACCCCAGGCTGCTGCTCAGTCTGCTCCCCGGACTGTGCATTGCCCACCCATCATCTGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp CGTGAGGAGAGCCTGTGGCCACAGTTGTCTTCTTTGGGTTCCAGATaGTTCTTCTTCCTGGTGGCTTTGCCGGGGCGTCTTGGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: REESLWPQLSSLGSR*FFFLVALPGRLGGS
Trigger: AGAGCCGCCAAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGAAGACAACTGTGGCCACAGGCTCTCCTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp TGGACCTCTGGCACCTGGAGGATGGATCATCACGACACCAGGACCTaGAGGCTTGGCCATCGGAGTAATCGAAGGTGCAGGCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: WTSGTWRMDHHDTRT*RLGHRSNRRCRLGH
Trigger: ATGACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGGTGTCGTGATGATCCATCCTCCAGGTGCCAGAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GAGATAAGGGCTGACTCTCCCTATCAGGGTCCTCCTGAGCAGCACTaGATCCCCGAGAGACGCTTGGGACCTCAGAAGCCATCCATGTCT +
Preference number: 5 (lower is better)
Translates to: EIRADSPYQGPPEQH*IPERRLGPQKPSMS
Trigger: AGACATGGATGGCTTCTGAGGTCCCAAGCGTCTCTCGGGGATCCAGTGCTGCTCAGGAGGACCCTGATAGGGAGAGTCAGCCCTTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp GGATGGGGACTGCTGGTGGGGTCGTGGGCATCATCATCGCTGTCATaGGACTCTTCGGCGGCGGCATTTGCGTCCTTGTATTCTAACTCT +
Preference number: 5 (lower is better)
Translates to: GWGLLVGSWASSSLS*DSSAAAFASLYSNS
Trigger: AGAGTTAGAATACAAGGACGCAAATGCCGCCGCCGAAGAGTCCCATGACAGCGATGATGATGCCCACGACCCCACCAGCAGTCCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 90 bp ACTGTCTGGGGCACCTGTGGGCCTGACTGTGGCACCAAATGTATCTaGGCAACTGGTGGTACTGTAGACACCTGGCCTGTTCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: TVWGTCGPDCGTKCI*ATGGTVDTWPVPGT
Trigger: GGTACCAGGAACAGGCCAGGTGTCTACAGTACCACCAGTTGCTCAGATACATTTGGTGCCACAGTCAGGCCCACAGGTGCCCCAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 90 bp GGAATGCCCGGGGCCCCCAGAGAAGCTCGTATTCTGCAGGCTCAGTaGACGGGATTTGCCTGTACTCTAGGTACCTGTGTCTCACAAACA +
Preference number: 5 (lower is better)
Translates to: GMPGAPREARILQAQ*TGFACTLGTCVSQT
Trigger: TGTTTGTGAGACACAGGTACCTAGAGTACAGGCAAATCCCGTTCACTGAGCCTGCAGAATACGAGCTTCTCTGGGGGCCCCGGGCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 90 bp GATAGACAGTTGGGCTGGCAGTACTGTCTGGGGCACCTGTGGGCCTaGCTGTGGCACCAAATGTATCTGAGCAACTGGTGGTACTGTAGA +
Preference number: 5 (lower is better)
Translates to: DRQLGWQYCLGHLWA*LWHQMYLSNWWYCR
Trigger: TCTACAGTACCACCAGTTGCTCAGATACATTTGGTGCCACAGTCAGGCCCACAGGTGCCCCAGACAGTACTGCCAGCCCAACTGTCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 90 bp GGCCCCCAGAGAAGCTCGTATTCTGCAGGCTCAGTGAACGGGATTTaGCTGTACTCTAGGTACCTGTGTCTCACAAACACACTGGTGATG +
Preference number: 5 (lower is better)
Translates to: GPQRSSYSAGSVNGI*LYSRYLCLTNTLVM
Trigger: CATCACCAGTGTGTTTGTGAGACACAGGTACCTAGAGTACAGGCAAATCCCGTTCACTGAGCCTGCAGAATACGAGCTTCTCTGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGAGGTGGGTGGGTCATaGGGGTCCCAGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDEVGGS*GSQEEE
Trigger: CTCCTCCTCCTGGGACCCCAATGACCCACCCACCTC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTTGGGTGTGGTGGCTaGCCAGCCTGGGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTVGCGG*PAWGCG
Trigger: GCCACACCCCCAGGCTGGCAAGCCACCACACCCAAC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCCCTTGGCGCCCAGGTaGAGTGGCCTGCCAGGCTAT +
Preference number: 5 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDPLAPR*SGLPGY
Trigger: ATAGCCTGGCAGGCCACTCAACCTGGGCGCCAAGGG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTACCGGGGCCTGGCCTTaGGGGGCCTGCCAGATGATG +
Preference number: 5 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTTGAWP*GACQMM
Trigger: CATCATCTGGCAGGCCCCCAAAGGCCAGGCCCCGGT...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCTGCAAGCCAGAGGCTaGGGCCTGGTGGGTCGGCAG +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSLQARG*GLVGRQ
Trigger: CTGCCGACCCACCAGGCCCAAGCCTCTGGCTTGCAG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp ATGACAACATTTACCATCTCCGAGAGCTGGACAGGCACCTTGGCTTaGTCTTTGACCAAGAGAAACTGCACCAAAGCGTTTGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: MTTFTISESWTGTLA*SLTKRNCTKAFALS
Trigger: TGAGAGAGCAAACGCTTTGGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAATGTTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 90 bp TCGTCTTTGTATTCTCGGATGACAACATTTACCATCTCCGAGAGCTaGACAGGCACCTTGGCTTGGTCTTTGACCAAGAGAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: SSLYSRMTTFTISES*TGTLAWSLTKRNCT
Trigger: GGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAATGTTGTCATCCGAGAATACAAAGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGTGGAGCCTGGACCATaGGGGCCCCTAGACCAGGAG +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSVEPGP*GPLDQE
Trigger: CTCCTGGTCTAGGGGCCCCAATGGTCCAGGCTCCAC...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGGGGTCACCTGCCAGTaGGGTGTGGTGGCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTGVTCQ*GVVACQ
Trigger: CTGGCAAGCCACCACACCCAACTGGCAGGTGACCCC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTGGCCTGCCAGGCTATaGTGGGGGCCTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSWPARL*WGPARS
Trigger: TGACCTGGCAGGCCCCCACAATAGCCTGGCAGGCCA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACATGGAACCGGGACCTCTaGTGGCACCGGGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTWNRDL*WHRELL
Trigger: CAGGAGCTCCCGGTGCCACAAGAGGTCCCGGTTCCA...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGGTCGGCAGCTGAGTTaGCAGTGCCTTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTGRQLS*QCLGGG
Trigger: GCCTCCTCCAAGGCACTGCAAACTCAGCTGCCGACC...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTCATGGGCAGTGGGCCTaGCCAAGAAGGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTHGQWA*PRRLQL
Trigger: CAGCTGCAGCCTTCTTGGCAAGGCCCACTGCCCATG...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAGCCCCGGGGAAAGTTaGCCAGTGTGGCAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTSPGES*PVWQRL
Trigger: GAGCCTCTGCCACACTGGCAAACTTTCCCCGGGGCT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTTCAAGACTCCAGGAGTaGGAGGCTTGGCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSSRLQE*EAWPSP
Trigger: GGGGGATGGCCAAGCCTCCAACTCCTGGAGTCTTGA...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATCAAATGGCAGTGACTTaGGGCTCTCTGAGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDQMAVT*GSLRRQ
Trigger: CTGCCGCCTCAGAGAGCCCAAAGTCACTGCCATTTG...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTATCCCCGAGAGACGCTaGGGACCTCAGAAGCCATCC +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSIPERR*GPQKPS
Trigger: GGATGGCTTCTGAGGTCCCAAGCGTCTCTCGGGGAT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACACCAGGACCTGGAGGCTaGGCCATCGGAGTAATCGAA +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTPGPGG*AIGVIE
Trigger: TTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGG...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTAGCTGGACAGGCACCTaGGCTTGGTCTTTGACCAAG +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSSWTGT*AWSLTK
Trigger: CTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCT...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTTTTGGAGGACCCTTTTaGTCCCTTGCAGGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: RQINCHFFSHTRQHNSDTFGGPF*SLAGAL
Trigger: TAGGGCACCTGCAAGGGACAAAAAGGGTCCTCCAAA...AGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAAGCCTGTGGCCACAGTaGTCTTCTTTGGGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTSLWPQ*SSLGSR
Trigger: TCTGGAACCCAAAGAAGACAACTGTGGCCACAGGCT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAACCTTGGCTTGGTCTTaGACCAAGAGAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTTLAWS*TKRNCT
Trigger: GGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGT...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp AAAACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTCACTCCAGCTTAGTGTaGGCACGGTTGATGATGTCT +
Preference number: 5 (lower is better)
Translates to: KTRQINCHFFSHTRQHNSHSSLV*ARLMMS
Trigger: AGACATCATCAACCGTGCCAACACTAAGCTGGAGTG...AGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ACGAGACAAATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATGTCAACTTCCTTCAGTaGACAACCAAAGGTGCACTC +
Preference number: 5 (lower is better)
Translates to: TRQINCHFFSHTRQHNSDVNFLQ*TTKGAL
Trigger: GAGTGCACCTTTGGTTGTCAACTGAAGGAAGTTGAC...ATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTATTTGTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACAGCGGCATTTGCGTCCTaGTATTCTAACTCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTAAFAS*YSNSAS
Trigger: ACTGGCAGAGTTAGAATACAAGGACGCAAATGCCGC...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS-3UTR CAA 90 bp ATAAACTGTCATTTCTTTTCACACACAAGGCAGCACAACTCTGATACTGTAACATTAGTGTTGGCACGGTaGATGATGTCTAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: INCHFFSHTRQHNSDTVTLVLAR*MMSKLS
Trigger: CGACAGCTTAGACATCATCAACCGTGCCAACACTAA...TGTTACAGTATCAGAGTTGTGCTGCCTTGTGTGTGAAAAGAAATGACAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp CGGAGCCCGCATCAGAACCGTAGGGCGGCTATGGACTaGAGGCACTGGGGACTCCGGAGGGCTGGAATCCCC +
Preference number: 6 (lower is better)
Translates to: RSPHQNRRAAMD*RHWGLRRAGIP
Trigger: GGGGATTCCAGCCCTCCGGAGTCCCCAGTGCCTGCAGTCCATAGCCGCCCTACGGTTCTGATGCGGGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GCAGGCGGAGCCCGCATCAGAACCGTAGGGCGGCTATaGACTGCAGGCACTGGGGACTCCGGAGGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: AGGARIRTVGRL*TAGTGDSGGLE
Trigger: TTCCAGCCCTCCGGAGTCCCCAGTGCCTGCAGTCCATAGCCGCCCTACGGTTCTGATGCGGGCTCCGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp AGGTGCAGGCTGGGTCATCAAGGCAGCCTGTGGAGGTaGCTGGACCATCGGAGCTCCCGGAGCAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RCRLGHQGSLWR*LDHRSSRSRRL
Trigger: CAGCCGCCTGCTCCGGGAGCTCCGATGGTCCAGCCACCTCCACAGGCTGCCTTGATGACCCAGCCTGCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGAACCGGGACCTCTTGTGGCACCGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGGCACTGGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: WNRDLLWHRELL*HRELLWHWELL
Trigger: CAGGAGCTCCCAGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAAGAGGTCCCGGTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGCACCGGGAGCTCCTGTGGAACCGGGAGCTCCTGTaGCACCGGGATCTCCTGTGGCACCGGGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: WHRELLWNRELL*HRDLLWHRDLL
Trigger: CAGGAGATCCCGGTGCCACAGGAGATCCCGGTGCCACAGGAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGCACTGGGAGCTCCTGTGGCACCGGGAGCTCCTGTaGAACCGGGAGCTCCTGTGGCACCGGGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: WHWELLWHRELL*NRELLWHRDLL
Trigger: CAGGAGATCCCGGTGCCACAGGAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGCACCGGGAGCTCTTGTGGCACTGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGGAACCGGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: WHRELLWHWELL*HRELLWNRELL
Trigger: CAGGAGCTCCCGGTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGCACTGGGAGCTCCTGTGGCACCGGGAGCTCTTGTaGCACTGGGAGCTCCTGTGGCACCGGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: WHWELLWHRELL*HWELLWHRELL
Trigger: CAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp ACGAGCCTGTGGAGCCTGCCGCAGTGGAGGTGGGGGTaGCAGGACCTGCCACAGCTGAGGCTGGCTTGCTAT +
Preference number: 6 (lower is better)
Translates to: TSLWSLPQWRWG*QDLPQLRLACY
Trigger: ATAGCAAGCCAGCCTCAGCTGTGGCAGGTCCTGCCACCCCCACCTCCACTGCGGCAGGCTCCACAGGCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGGAGCTCCTGTGGCACCGGGAGCTCTTGTGGCACTaGGAGCTCCTGTGGCACCGGGAGCTCCTGTGGAAC +
Preference number: 6 (lower is better)
Translates to: WELLWHRELLWH*ELLWHRELLWN
Trigger: GTTCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCAGTGCCACAAGAGCTCCCGGTGCCACAGGAGCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TACCTCCTGGAACTCCAATGGCACCGGGAGCTCCTGTaGCACCGGGAGCTCCTGTGGCACCGGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: YLLELQWHRELL*HRELLWHRELL
Trigger: CAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCACAGGAGCTCCCGGTGCCATTGGAGTTCCAGGAGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp GCTATTGTGGGGGCCTGCCAGGTCACCTGTGTAGCCTaGCATGTCAAAGGCGTTGCTGGCCACCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: AIVGACQVTCVA*HVKGVAGHPWG
Trigger: CCCCCAGGGGTGGCCAGCAACGCCTTTGACATGGCAGGCTACACAGGTGACCTGGCAGGCCCCCACAATAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp CCTCCCAGGCAGGTTGAGGAGCCTGCCAAGCAGCCATaGGAGCCTGCAAGTCCACTGGAGGTGGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: PPRQVEEPAKQP*EPASPLEVDPR
Trigger: CCTGGGATCCACCTCCAGTGGACTTGCAGGCTCCCATGGCTGCTTGGCAGGCTCCTCAACCTGCCTGGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GTAGCCTGCCATGTCAAAGGCGTTGCTGGCCACCCCTaGGGGGTCACCTGCCAGTTGGGTGTGGTGGCTTGC +
Preference number: 6 (lower is better)
Translates to: VACHVKGVAGHP*GVTCQLGVVAC
Trigger: GCAAGCCACCACACCCAACTGGCAGGTGACCCCCCAGGGGTGGCCAGCAACGCCTTTGACATGGCAGGCTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGGAACCGGGAGCTCCTGTGGCACCGGGATCTCCTGTaGCACCGGGATCTCCTGTGGAACCGGGACCTCTTG +
Preference number: 6 (lower is better)
Translates to: WNRELLWHRDLL*HRDLLWNRDLL
Trigger: CAAGAGGTCCCGGTTCCACAGGAGATCCCGGTGCCACAGGAGATCCCGGTGCCACAGGAGCTCCCGGTTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp TGCCTGCAAGCCAGAGGCTTGGGCCTGGTGGGTCGGCAGCTGAGTTaGCAGTGCCTTGGAGGAGGCTGGAGCTCCCTGAAAGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: CLQARGLGLVGRQLS*QCLGGGWSSLKGLL
Trigger: CAGCAGCCCTTTCAGGGAGCTCCAGCCTCCTCCAAGGCACTGCAAACTCAGCTGCCGACCCACCAGGCCCAAGCCTCTGGCTTGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp GGAGGATGGGTCATAGGGTTCCCAGGAGGAGGATGGTaGCCCATCGGAGTCCCAGGAGGAGGTGGGTGGGTC +
Preference number: 6 (lower is better)
Translates to: GGWVIGFPGGGW*PIGVPGGGGWV
Trigger: GACCCACCCACCTCCTCCTGGGACTCCGATGGGTCACCATCCTCCTCCTGGGAACCCTATGACCCATCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp CAAGAAGGCTGCAGCTGCACTGAAGGCAGTTCTGCCTaGAAGCCAGAGGCTTGGGCCTGGTGGGTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: QEGCSCTEGSSA*KPEAWAWWVGS
Trigger: GCTGCCGACCCACCAGGCCCAAGCCTCTGGCTTGCAGGCAGAACTGCCTTCAGTGCAGCTGCAGCCTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GTGATCGAGTGGAGCCCCGGGGAAAGTTTGCCAGTGTaGCAGAGGCTCCAGGCTGGGCCTGCAACATGGGCA +
Preference number: 6 (lower is better)
Translates to: VIEWSPGESLPV*QRLQAGPATWA
Trigger: TGCCCATGTTGCAGGCCCAGCCTGGAGCCTCTGCCACACTGGCAAACTTTCCCCGGGGCTCCACTCGATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp CTTCCTGGTGGCTTTGCCGGGGCGTCTTGGCGGCTCTaGAGACTTAGAGGCCTCTGCAGCAGTGGCACTTGC +
Preference number: 6 (lower is better)
Translates to: LPGGFAGASWRL*RLRGLCSSGTC
Trigger: GCAAGTGCCACTGCTGCAGAGGCCTCTAAGTCTTCAGAGCCGCCAAGACGCCCCGGCAAAGCCACCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp TGGGGGTGGCAGGACCTGCCACAGCTGAGGCTGGCTTaGTATGCCATGTGGAGCTGGTCTGATAGGGACCTG +
Preference number: 6 (lower is better)
Translates to: WGWQDLPQLRLA*YAMWSWSDRDL
Trigger: CAGGTCCCTATCAGACCAGCTCCACATGGCATAGCAAGCCAGCCTCAGCTGTGGCAGGTCCTGCCACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp AAGTTTGCCAGTGTGGCAGAGGCTCCAGGCTGGGCCTaGAACATGGGCAGTGGGCCTTGCCAAGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: KFASVAEAPGWA*NMGSGPCQEGC
Trigger: GCAGCCTTCTTGGCAAGGCCCACTGCCCATGTTGCAGGCCCAGCCTGGAGCCTCTGCCACACTGGCAAACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp CATCAGAACCGTAGGGCGGCTATGGACTGCAGGCACTaGGGACTCCGGAGGGCTGGAATCCCCCAGATTCGT +
Preference number: 6 (lower is better)
Translates to: HQNRRAAMDCRH*GLRRAGIPQIR
Trigger: ACGAATCTGGGGGATTCCAGCCCTCCGGAGTCCCCAGTGCCTGCAGTCCATAGCCGCCCTACGGTTCTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GGAGGCTTGGCCATCGGAGTAATCGAAGGTGCAGGCTaGGTCATCAAGGCAGCCTGTGGAGGTGGCTGGACC +
Preference number: 6 (lower is better)
Translates to: GGLAIGVIEGAG*VIKAACGGGWT
Trigger: GGTCCAGCCACCTCCACAGGCTGCCTTGATGACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GGTCGGCAGCTGAGTTTGCAGTGCCTTGGAGGAGGCTaGAGCTCCCTGAAAGGGCTGCTGCTGCTCCACATG +
Preference number: 6 (lower is better)
Translates to: GRQLSLQCLGGG*SSLKGLLLLHM
Trigger: CATGTGGAGCAGCAGCAGCCCTTTCAGGGAGCTCCAGCCTCCTCCAAGGCACTGCAAACTCAGCTGCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp CTAGGGCCCTCCAAGCTCCTTGGCATCCTAGAAGTGTaGGGGCACCCCCAGTCATTCAGGCCCTGCGGAGTG +
Preference number: 6 (lower is better)
Translates to: LGPSKLLGILEV*GHPQSFRPCGV
Trigger: CACTCCGCAGGGCCTGAATGACTGGGGGTGCCCCAACACTTCTAGGATGCCAAGGAGCTTGGAGGGCCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp AGGACCTGGAGGCTTGGCCATCGGAGTAATCGAAGGTaGAGGCTGGGTCATCAAGGCAGCCTGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RTWRLGHRSNRR*RLGHQGSLWRW
Trigger: CCACCTCCACAGGCTGCCTTGATGACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp GCCTGCAACATGGGCAGTGGGCCTTGCCAAGAAGGCTaGAGCTGCACTGAAGGCAGTTCTGCCTGCAAGCCA +
Preference number: 6 (lower is better)
Translates to: ACNMGSGPCQEG*SCTEGSSACKP
Trigger: TGGCTTGCAGGCAGAACTGCCTTCAGTGCAGCTGCAGCCTTCTTGGCAAGGCCCACTGCCCATGTTGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp CCACAGCTGAGGCTGGCTTGCTATGCCATGTGGAGCTaGTCTGATAGGGACCTGTCGGATCAGTGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PQLRLACYAMWS*SDRDLSDQWWG
Trigger: GCCCCACCACTGATCCGACAGGTCCCTATCAGACCAGCTCCACATGGCATAGCAAGCCAGCCTCAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GCAGCAGCCTGGGGTACAGGAATTGGGATAGACAGTTaGGCTGGCAGTACTGTCTGGGGCACCTGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: AAAWGTGIGIDS*AGSTVWGTCGP
Trigger: AGGCCCACAGGTGCCCCAGACAGTACTGCCAGCCCAACTGTCTATCCCAATTCCTGTACCCCAGGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GGCCAGGTTCTCCTGATGGAGCCATACGTGATCGAGTaGAGCCCCGGGGAAAGTTTGCCAGTGTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GQVLLMEPYVIE*SPGESLPVWQR
Trigger: CCTCTGCCACACTGGCAAACTTTCCCCGGGGCTCCACTCGATCACGTATGGCTCCATCAGGAGAACCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GTCCTCCTGAGCAGCACTGGATCCCCGAGAGACGCTTaGGACCTCAGAAGCCATCCATGTCTGAGACCCACC +
Preference number: 6 (lower is better)
Translates to: VLLSSTGSPRDA*DLRSHPCLRPT
Trigger: GGTGGGTCTCAGACATGGATGGCTTCTGAGGTCCCAAGCGTCTCTCGGGGATCCAGTGCTGCTCAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GCTGACTCTCCCTATCAGGGTCCTCCTGAGCAGCACTaGATCCCCGAGAGACGCTTGGGACCTCAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ADSPYQGPPEQH*IPERRLGPQKP
Trigger: TGGCTTCTGAGGTCCCAAGCGTCTCTCGGGGATCCAGTGCTGCTCAGGAGGACCCTGATAGGGAGAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp AGCAGCAGCCTGGGGTACAGGAATTGGGATAGACAGTaGGGCTGGCAGTACTGTCTGGGGCACCTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: SSSLGYRNWDRQ*GWQYCLGHLWA
Trigger: GGCCCACAGGTGCCCCAGACAGTACTGCCAGCCCAACTGTCTATCCCAATTCCTGTACCCCAGGCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp CCCCGCCAGTCACGTGAGGAGAGCCTGTGGCCACAGTTGTCTTCTTaGGGTTCCAGATGCTTCTTCTTCCTGGTGGCTTTGCCGGGGCGT +
Preference number: 6 (lower is better)
Translates to: PRQSREESLWPQLSS*GSRCFFFLVALPGR
Trigger: ACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGAAGACAACTGTGGCCACAGGCTCTCCTCACGTGACTGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp AGACCCACCCGAGTCACCACAGAATTCCTGGTCCCGTaGAGTGCTAGGGCCCTCCAAGCTCCTTGGCATCCT +
Preference number: 6 (lower is better)
Translates to: RPTRVTTEFLVP*SARALQAPWHP
Trigger: AGGATGCCAAGGAGCTTGGAGGGCCCTAGCACTTCACGGGACCAGGAATTCTGTGGTGACTCGGGTGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp AACATGGGCAGTGGGCCTTGCCAAGAAGGCTGCAGCTaGACTGAAGGCAGTTCTGCCTGCAAGCCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: NMGSGPCQEGCS*TEGSSACKPEA
Trigger: AGCCTCTGGCTTGCAGGCAGAACTGCCTTCAGTGCAGCTGCAGCCTTCTTGGCAAGGCCCACTGCCCATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TCCATGAGTGAGAGGATGCACCATCGGGTTCCCCGGTaGAGGATGGGTCATAGGGTTCCCAGGAGGAGGATG +
Preference number: 6 (lower is better)
Translates to: SMSERMHHRVPR*RMGHRVPRRRM
Trigger: CATCCTCCTCCTGGGAACCCTATGACCCATCCTCCACCGGGGAACCCGATGGTGCATCCTCTCACTCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GGCACCTGGAGGATGGATCATCACGACACCAGGACCTaGAGGCTTGGCCATCGGAGTAATCGAAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: GTWRMDHHDTRT*RLGHRSNRRCR
Trigger: CCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGGTGTCGTGATGATCCATCCTCCAGGTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GACCTGCCACAGCTGAGGCTGGCTTGCTATGCCATGTaGAGCTGGTCTGATAGGGACCTGTCGGATCAGTGG +
Preference number: 6 (lower is better)
Translates to: DLPQLRLACYAM*SWSDRDLSDQW
Trigger: CCACTGATCCGACAGGTCCCTATCAGACCAGCTCCACATGGCATAGCAAGCCAGCCTCAGCTGTGGCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp CTGCTGGTGGGGTCGTGGGCATCATCATCGCTGTCATaGGACTCTTCGGCGGCGGCATTTGCGTCCTTGTAT +
Preference number: 6 (lower is better)
Translates to: LLVGSWASSSLS*DSSAAAFASLY
Trigger: ATACAAGGACGCAAATGCCGCCGCCGAAGAGTCCCATGACAGCGATGATGATGCCCACGACCCCACCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp GGAGGATGGATCATCACGACACCAGGACCTGGAGGCTaGGCCATCGGAGTAATCGAAGGTGCAGGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: GGWIITTPGPGG*AIGVIEGAGWV
Trigger: GACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGGTGTCGTGATGATCCATCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp CTGGCACCTGGAGGATGGATCATCACGACACCAGGACCTGGAGGCTaGGCCATCGGAGTAATCGAAGGTGCAGGCTGGGTCATCAAGGCA +
Preference number: 6 (lower is better)
Translates to: LAPGGWIITTPGPGG*AIGVIEGAGWVIKA
Trigger: TGCCTTGATGACCCAGCCTGCACCTTCGATTACTCCGATGGCCAAGCCTCCAGGTCCTGGTGTCGTGATGATCCATCCTCCAGGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp CCCAGGGGGCAGCACTGTCTGAGCCATTGGTGCTCCTaGTACTGGAGTCTGAATGATTGGACCTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: PRGQHCLSHWCS*YWSLNDWTSGT
Trigger: GGTGCCAGAGGTCCAATCATTCAGACTCCAGTATCAGGAGCACCAATGGCTCAGACAGTGCTGCCCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp TTGGGCTGGCAGTACTGTCTGGGGCACCTGTGGGCCTaGCTGTGGCACCAAATGTATCTGAGCAACTGGTGG +
Preference number: 6 (lower is better)
Translates to: LGWQYCLGHLWA*LWHQMYLSNWW
Trigger: CCACCAGTTGCTCAGATACATTTGGTGCCACAGTCAGGCCCACAGGTGCCCCAGACAGTACTGCCAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp ATGATGGGTGGGCAATGCACAGTCCGGGGAGCAGACTaGGCAGCAGCCTGGGGTACAGGAATTGGGATAGAC +
Preference number: 6 (lower is better)
Translates to: MMGGQCTVRGAD*AAAWGTGIGID
Trigger: GTCTATCCCAATTCCTGTACCCCAGGCTGCTGCTCAGTCTGCTCCCCGGACTGTGCATTGCCCACCCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp GGGGCCCCCAGAGAAGCTCGTATTCTGCAGGCTCAGTaGACGGGATTTGCCTGTACTCTAGGTACCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GAPREARILQAQ*TGFACTLGTCV
Trigger: GACACAGGTACCTAGAGTACAGGCAAATCCCGTTCACTGAGCCTGCAGAATACGAGCTTCTCTGGGGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GGAATTGGGATAGACAGTTGGGCTGGCAGTACTGTCTaGGGCACCTGTGGGCCTGACTGTGGCACCAAATGT +
Preference number: 6 (lower is better)
Translates to: GIGIDSWAGSTV*GTCGPDCGTKC
Trigger: ACATTTGGTGCCACAGTCAGGCCCACAGGTGCCCCAGACAGTACTGCCAGCCCAACTGTCTATCCCAATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp CAGTTGTCTTCTTTGGGTTCCAGATGCTTCTTCTTCCTGGTGGCTTaGCCGGGGCGTCTTGGCGGCTCTGAAGACTTAGAGGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: QLSSLGSRCFFFLVA*PGRLGGSEDLEASA
Trigger: TGCAGAGGCCTCTAAGTCTTCAGAGCCGCCAAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGAAGACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp CGTGGGCATCATCATCGCTGTCATGGGACTCTTCGGCGGCGGCATTaGCGTCCTTGTATTCTAACTCTGCCAGTGAGTCAAGGTACTGGC +
Preference number: 6 (lower is better)
Translates to: RGHHHRCHGTLRRRH*RPCILTLPVSQGTG
Trigger: GCCAGTACCTTGACTCACTGGCAGAGTTAGAATACAAGGACGCAAATGCCGCCGCCGAAGAGTCCCATGACAGCGATGATGATGCCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp GGCACCTGTGGGCCTGACTGTGGCACCAAATGTATCTaGGCAACTGGTGGTACTGTAGACACCTGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: GTCGPDCGTKCI*ATGGTVDTWPV
Trigger: AACAGGCCAGGTGTCTACAGTACCACCAGTTGCTCAGATACATTTGGTGCCACAGTCAGGCCCACAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp AGCCTGTGGCCACAGTTGTCTTCTTTGGGTTCCAGATaGTTCTTCTTCCTGGTGGCTTTGCCGGGGCGTCTT +
Preference number: 6 (lower is better)
Translates to: SLWPQLSSLGSR*FFFLVALPGRL
Trigger: AAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGAAGACAACTGTGGCCACAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TGTCTTCTTTGGGTTCCAGATGCTTCTTCTTCCTGGTaGCTTTGCCGGGGCGTCTTGGCGGCTCTGAAGACT +
Preference number: 6 (lower is better)
Translates to: CLLWVPDASSSW*LCRGVLAALKT
Trigger: AGTCTTCAGAGCCGCCAAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp AGTTGTCTTCTTTGGGTTCCAGATGCTTCTTCTTCCTaGTGGCTTTGCCGGGGCGTCTTGGCGGCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SCLLWVPDASSS*WLCRGVLAALK
Trigger: CTTCAGAGCCGCCAAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGAAGACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp TCTTTGGGTTCCAGATGCTTCTTCTTCCTGGTGGCTTaGCCGGGGCGTCTTGGCGGCTCTGAAGACTTAGAG +
Preference number: 6 (lower is better)
Translates to: SLGSRCFFFLVA*PGRLGGSEDLE
Trigger: CTCTAAGTCTTCAGAGCCGCCAAGACGCCCCGGCAAAGCCACCAGGAAGAAGAAGCATCTGGAACCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp CTGTCATGGGACTCTTCGGCGGCGGCATTTGCGTCCTaGTATTCTAACTCTGCCAGTGAGTCAAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: LSWDSSAAAFAS*YSNSASESRYW
Trigger: CCAGTACCTTGACTCACTGGCAGAGTTAGAATACAAGGACGCAAATGCCGCCGCCGAAGAGTCCCATGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp TCATCATCGCTGTCATGGGACTCTTCGGCGGCGGCATTTGCGTCCTaGTATTCTAACTCTGCCAGTGAGTCAAGGTACTGGCATGACCAG +
Preference number: 6 (lower is better)
Translates to: SSSLSWDSSAAAFAS*YSNSASESRYWHDQ
Trigger: CTGGTCATGCCAGTACCTTGACTCACTGGCAGAGTTAGAATACAAGGACGCAAATGCCGCCGCCGAAGAGTCCCATGACAGCGATGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp AGCACAGAAAGTGGCACCAATGAACATGCGCTCTTTTaGAGGACCCTTTTTGTCCCTTGCAGGTGCCCTACG +
Preference number: 6 (lower is better)
Translates to: STESGTNEHALF*RTLFVPCRCPT
Trigger: CGTAGGGCACCTGCAAGGGACAAAAAGGGTCCTCCAAAAGAGCGCATGTTCATTGGTGCCACTTTCTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp GAAAGACCCTTGAGGTGGCAGGAAAGGTCTCTGATGTaGCAGGCAAGTTTTTCCAGGCAGTTGGCACGTATG +
Preference number: 6 (lower is better)
Translates to: ERPLRWQERSLM*QASFSRQLARM
Trigger: CATACGTGCCAACTGCCTGGAAAAACTTGCCTGCCACATCAGAGACCTTTCCTGCCACCTCAAGGGTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp CATCATCGCTGTCATGGGACTCTTCGGCGGCGGCATTaGCGTCCTTGTATTCTAACTCTGCCAGTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: HHRCHGTLRRRH*RPCILTLPVSQ
Trigger: TTGACTCACTGGCAGAGTTAGAATACAAGGACGCAAATGCCGCCGCCGAAGAGTCCCATGACAGCGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp GATGACAACATTTACCATCTCCGAGAGCTGGACAGGCACCTTGGCTaGGTCTTTGACCAAGAGAAACTGCACCAAAGCGTTTGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: DDNIYHLRELDRHLG*VFDQEKLHQSVCSL
Trigger: GAGAGAGCAAACGCTTTGGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAATGTTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp TCTCGGATGACAACATTTACCATCTCCGAGAGCTGGACAGGCACCTaGGCTTGGTCTTTGACCAAGAGAAACTGCACCAAAGCGTTTGCT +
Preference number: 6 (lower is better)
Translates to: SRMTTFTISESWTGT*AWSLTKRNCTKAFA
Trigger: AGCAAACGCTTTGGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAATGTTGTCATCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS TCA 72 bp CTTGTGGTACAGAGGGAACCTGTGGAGGAGCCCTTATaGCTTGAGACTGGATTTGTAGGATCAAAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: LVVQREPVEEPL*LETGFVGSKAD
Trigger: GTCAGCCTTTGATCCTACAAATCCAGTCTCAAGTCATAAGGGCTCCTCCACAGGTTCCCTCTGTACCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp ATTTACCATCTCCGAGAGCTGGACAGGCACCTTGGCTaGGTCTTTGACCAAGAGAAACTGCACCAAAGCGTT +
Preference number: 6 (lower is better)
Translates to: IYHLRELDRHLG*VFDQEKLHQSV
Trigger: AACGCTTTGGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp ACAGGCACCTTGGCTTGGTCTTTGACCAAGAGAAACTaGACCAAAGCGTTTGCTCTCTCATCTAAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: TGTLAWSLTKRN*TKAFALSSKGD
Trigger: ATCTCCCTTAGATGAGAGAGCAAACGCTTTGGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS GCA 72 bp AGAAGCTCGTATTCTGCAGGCTCAGTGAACGGGATTTaGCTGTACTCTAGGTACCTGTGTCTCACAAACACA +
Preference number: 6 (lower is better)
Translates to: RSSYSAGSVNGI*LYSRYLCLTNT
Trigger: TGTGTTTGTGAGACACAGGTACCTAGAGTACAGGCAAATCCCGTTCACTGAGCCTGCAGAATACGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp TATTCTCGGATGACAACATTTACCATCTCCGAGAGCTaGACAGGCACCTTGGCTTGGTCTTTGACCAAGAGA +
Preference number: 6 (lower is better)
Translates to: YSRMTTFTISES*TGTLAWSLTKR
Trigger: TCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAATGTTGTCATCCGAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp ACAACATTTACCATCTCCGAGAGCTGGACAGGCACCTaGGCTTGGTCTTTGACCAAGAGAAACTGCACCAAA +
Preference number: 6 (lower is better)
Translates to: TTFTISESWTGT*AWSLTKRNCTK
Trigger: TTTGGTGCAGTTTCTCTTGGTCAAAGACCAAGCCAAGGTGCCTGTCCAGCTCTCGGAGATGGTAAATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp CAACCAAAGGTGCACTCCAGCTTAGTGTTGGCACGGTaGATGATGTCTAAGCTGTCGTCTTTGTATTCTCGG +
Preference number: 6 (lower is better)
Translates to: QPKVHSSLVLAR*MMSKLSSLYSR
Trigger: CCGAGAATACAAAGACGACAGCTTAGACATCATCAACCGTGCCAACACTAAGCTGGAGTGCACCTTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp TCCAGCTTAGTGTTGGCACGGTTGATGATGTCTAAGCTGTCGTCTTaGTATTCTCGGATGACAACATTTACCATCTCCGAGAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: SSLVLARLMMSKLSS*YSRMTTFTISESWT
Trigger: TGTCCAGCTCTCGGAGATGGTAAATGTTGTCATCCGAGAATACAAAGACGACAGCTTAGACATCATCAACCGTGCCAACACTAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 90 bp GTTGACGATGATGTAAGTGTGGGTTTTGGTGTCAACTTCCTTCAGTaGACAACCAAAGGTGCACTCCAGCTTAGTGTTGGCACGGTTGAT +
Preference number: 6 (lower is better)
Translates to: VDDDVSVGFGVNFLQ*TTKGALQLSVGTVD
Trigger: ATCAACCGTGCCAACACTAAGCTGGAGTGCACCTTTGGTTGTCAACTGAAGGAAGTTGACACCAAAACCCACACTTACATCATCGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp AAGAGACCACTTGTCTCCTGGACATCCAGCCCTAGCTaGAACAGAAAACTAAAGAGCAGATTCTCCCTGATA +
Preference number: 6 (lower is better)
Translates to: KRPLVSWTSSPS*NRKLKSRFSLI
Trigger: TATCAGGGAGAATCTGCTCTTTAGTTTTCTGTTCCAGCTAGGGCTGGATGTCCAGGAGACAAGTGGTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CAA 72 bp GTGTTGGCACGGTTGATGATGTCTAAGCTGTCGTCTTaGTATTCTCGGATGACAACATTTACCATCTCCGAG +
Preference number: 6 (lower is better)
Translates to: VLARLMMSKLSS*YSRMTTFTISE
Trigger: CTCGGAGATGGTAAATGTTGTCATCCGAGAATACAAAGACGACAGCTTAGACATCATCAACCGTGCCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7
CDS CCA 72 bp AGCTTCTTTGTAATTCTGAAGAGACCACTTGTCTCCTaGACATCCAGCCCTAGCTGGAACAGAAAACTAAAG +
Preference number: 6 (lower is better)
Translates to: SFFVILKRPLVS*TSSPSWNRKLK
Trigger: CTTTAGTTTTCTGTTCCAGCTAGGGCTGGATGTCCAGGAGACAAGTGGTCTCTTCAGAATTACAAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080403.7