Pregenerated sensors for MAGEH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047238Ensembl transcript IDs: ENSMUST00000051484.5
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACAAATACCAAATACAGTGCCCTCCCCACCCTCCACAACCTTTTaGATTCAGGACCCTGCCTATCTACTCCATGGAGCAGATACTTTG | + |
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Preference number: 1 (lower is better) Translates to: SQIPNTVPSPPSTTF*IQDPAYLLHGADTL Trigger: CAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR GCA 90 bp | CTTTGCAGTTTAACAATTAGCACTGGTCACAAATACCAAATACAGTaGCCTCCCCACCCTCCACAACCTTTTGAATTCAGGACCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LCSLTISTGHKYQIQ*PPHPPQPFEFRTLP Trigger: AGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGACCAGTGCTAATTGTTAAACTGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR CCA 90 bp | ACCCTCCACAACCTTTTGAATTCAGGACCCTGCCTATCTACTCCATaGAGCAGATACTTTGGATTCTCTTTTCCACTCCTAAGGGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: TLHNLLNSGPCLSTP*SRYFGFSFPLLRVC Trigger: GCAAACCCTTAGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR CCA 90 bp | GGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTACTaGTTATTCCAAACTTTCAAAGAACAGCCTCTCAGTGGTACTTTC | + |
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Preference number: 1 (lower is better) Translates to: GKTEQICNLLPLTLY*LFQTFKEQPLSGTF Trigger: GAAAGTACCACTGAGAGGCTGTTCTTTGAAAGTTTGGAATAACCAGTAAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR CAA 90 bp | GTCACAAATACCAAATACAGTGCCCTCCCCACCCTCCACAACCTTTaGAATTCAGGACCCTGCCTATCTACTCCATGGAGCAGATACTTT | + |
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Preference number: 2 (lower is better) Translates to: VTNTKYSALPTLHNL*NSGPCLSTPWSRYF Trigger: AAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR-3UTR TCA 90 bp | TATTTGCACAGTGAGCATATTTACAAATGTGTTCCATTACAAGACATCAGACACCCCTCCACAACCTTTTaGATTCAGGACCCTGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: YLHSEHIYKCVPLQDIRHPSTTF*IQDPAY Trigger: ATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGG...GTGTCTGATGTCTTGTAATGGAACACATTTGTAAATATGCTCACTGTGCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTGCACAGTGAGCATATTTACAAATGTGTTCCATTACAAGACATCAGACACAAATACCAAATACAGTaGCCTCCCCACCCTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: YLHSEHIYKCVPLQDIRHKYQIQ*PPHPPQ Trigger: TTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTT...GTGTCTGATGTCTTGTAATGGAACACATTTGTAAATATGCTCACTGTGCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR TCA 72 bp | CCAAATACAGTGCCCTCCCCACCCTCCACAACCTTTTaGATTCAGGACCCTGCCTATCTACTCCATGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: PNTVPSPPSTTF*IQDPAYLLHGA Trigger: TGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR GCA 72 bp | CTCCCCACCCTCCACAACCTTTTGAATTCAGGACCCTaGCTATCTACTCCATGGAGCAGATACTTTGGATTC | + |
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Preference number: 3 (lower is better) Translates to: LPTLHNLLNSGP*LSTPWSRYFGF Trigger: GAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR GCA 72 bp | TTAACAATTAGCACTGGTCACAAATACCAAATACAGTaGCCTCCCCACCCTCCACAACCTTTTGAATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LTISTGHKYQIQ*PPHPPQPFEFR Trigger: CCTGAATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGACCAGTGCTAATTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR CCA 72 bp | AACCTTTTGAATTCAGGACCCTGCCTATCTACTCCATaGAGCAGATACTTTGGATTCTCTTTTCCACTCCTA | + |
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Preference number: 3 (lower is better) Translates to: NLLNSGPCLSTP*SRYFGFSFPLL Trigger: TAGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTACTGGTTATTCCATGGAGCAGATACTTaGGATTCTCTTTTCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: GKTEQICNLLPLTLYWLFHGADT*DSLFHS Trigger: GGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATG...GAATAACCAGTAAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR CCA 72 bp | CTGGTTATTCCAAACTTTCAAAGAACAGCCTCTCAGTaGTACTTTCTATCCATCACACAACATGACACAAAG | + |
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Preference number: 3 (lower is better) Translates to: LVIPNFQRTASQ*YFLSITQHDTK Trigger: CTTTGTGTCATGTTGTGTGATGGATAGAAAGTACCACTGAGAGGCTGTTCTTTGAAAGTTTGGAATAACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| 3UTR CAA 72 bp | ACCAAATACAGTGCCCTCCCCACCCTCCACAACCTTTaGAATTCAGGACCCTGCCTATCTACTCCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TKYSALPTLHNL*NSGPCLSTPWS Trigger: GCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | CTGGTCACAAATACCAAATACAGTGCCCTCCCCACCCTCCACAACCTTTTGAATGCTAGATTCCACGTGTaGTCGAGGGCCCCAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVTNTKYSALPTLHNLLNARFHV*SRAPEE Trigger: TTCTTCTGGGGCCCTCGAGCACACGTGGAATCTAGC...ATTCAAAAGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CCA 90 bp | ACCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCACTCCTGAACTCATACTCCACTaGACTGCTGCGGGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: TLPIYSMEQILWILFSTPELILH*TAAGHW Trigger: CCAGTGCCCCGCAGCAGTCCAGTGGAGTATGAGTTC...AGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR TCA 90 bp | TTCAGGACCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCAGTGCTCGAAGCTTCTaGAGGGGTACTGGAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FRTLPIYSMEQILWILFSSARSF*RGTGGL Trigger: AAGGCCTCCAGTACCCCTTCAGAAGCTTCGAGCACT...GGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | CCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCACTCCTACACCAGGGCCTCCTTTaGGCTGTTGCCCATGATGAA | + |
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Preference number: 4 (lower is better) Translates to: PCLSTPWSRYFGFSFPLLHQGLL*AVAHDE Trigger: TTCATCATGGGCAACAGCGCAAAGGAGGCCCTGGTG...TAGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | TTCAGGACCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCTCGGATCTCCAAAGATaGTGTGCTGCCTCCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: FRTLPIYSMEQILWILFSSDLQR*CAASQA Trigger: AGCCTGGGAGGCAGCACAGCATCTTTGGAGATCCGA...GGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | CCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCACTCCTAACTCCACTGGACTGCTaGGGGGCACTGGCTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: PCLSTPWSRYFGFSFPLLTPLDC*GALAYK Trigger: TTTATAAGCCAGTGCCCCGCAGCAGTCCAGTGGAGT...TAGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | TCAGACACAAGGGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTTGCTGCCTCCCAGGCTaGATCCCTAACTTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SDTRERQNKSVIFFHSHFCCLPG*IPNFPS Trigger: GCTGGGGAAGTTAGGGATGCAGCCTGGGAGGCAGCA...AAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCCCTTGTGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | CTTTACTGGTTATTCCAAACTTTCAAAGAACAGCCTCTCAGTGGTACTTTCTATAGGCCTTCTCCAGGGTaGTTGTGTCTTCCTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LYWLFQTFKEQPLSGTFYRPSPG*LCLPPG Trigger: GCCCGGAGGAAGACACAAGCACCCTGGAGAAGGCCT...ATAGAAAGTACCACTGAGAGGCTGTTCTTTGAAAGTTTGGAATAACCAGTAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTACTGGTTATTCGAAGCCTCTGAGGCCTaGCTCTTGCGATTGTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: GKTEQICNLLPLTLYWLFEASEA*LLRLLR Trigger: TCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTC...GAATAACCAGTAAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR TCA 90 bp | TTGAATTCAGGACCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTCTCTGCATCATCATCTaGATCCCAGTCATAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: LNSGPCLSTPWSRYFGFSLCIII*IPVIVT Trigger: TGTAACTATGACTGGGATTCAGATGATGATGCAGAG...AGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGTCCTGAATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR TCA 90 bp | CATTACAAGACATCAGACACAAGGGAAAGACAGAACAAATCTGTAATCTTCTTCCTTTTCTTGGTGCCCTaGAAATTGCTCCGGGTAACC | + |
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Preference number: 4 (lower is better) Translates to: HYKTSDTRERQNKSVIFFLFLVP*KLLRVT Trigger: GGTTACCCGGAGCAATTTTCAGGGCACCAAGAAAAG...GAAGAAGATTACAGATTTGTTCTGTCTTTCCCTTGTGTCTGATGTCTTGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | TATCCATCACACAACATGACACAAAGACTTCATTTAATAAGGTTAGCACAGCTGCTGAGGCCTGGCTCTTaGGATTGTTGCGATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YPSHNMTQRLHLIRLAQLLRPGS*DCCDSL Trigger: AAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAG...CAGCTGTGCTAACCTTATTAAATGAAGTCTTTGTGTCATGTTGTGTGATGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | GGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTACTGGTTATTCGGAGACTTTTCTTGGTaGCCTGAAAATTGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GKTEQICNLLPLTLYWLFGDFSW*PENCSG Trigger: CCCGGAGCAATTTTCAGGGCACCAAGAAAAGTCTCC...GAATAACCAGTAAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CCA 90 bp | TATCCATCACACAACATGACACAAAGACTTCATTTAATAAGGTTAGCACAGCTGACTGCTGCGGGGCACTaGCTTATAAATCAGATACCC | + |
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Preference number: 4 (lower is better) Translates to: YPSHNMTQRLHLIRLAQLTAAGH*LINQIP Trigger: GGGTATCTGATTTATAAGCCAGTGCCCCGCAGCAGT...CAGCTGTGCTAACCTTATTAAATGAAGTCTTTGTGTCATGTTGTGTGATGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTACTGGTTATTCTACATGGCCAGTCTTTaGAGCATCGGTTCCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: GKTEQICNLLPLTLYWLFYMASL*SIGSEL Trigger: GAGTTCGGAACCGATGCTCCAAAGACTGGCCATGTA...GAATAACCAGTAAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CCA 90 bp | TCAGACACAAGGGAAAGACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTTTAGGAGACTTTTCTTaGTGCCCTGAAAATTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SDTRERQNKSVIFFHSHFLGDFS*CPENCS Trigger: GGAGCAATTTTCAGGGCACCAAGAAAAGTCTCCTAA...AAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGTCTTTCCCTTGTGTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR GCA 90 bp | TATCCATCACACAACATGACACAAAGACTTCATTTAATAAGGTTAGCACAGCTGTCGGTTCCGAACTCTTaGCACAAAATGCATGACTTT | + |
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Preference number: 4 (lower is better) Translates to: YPSHNMTQRLHLIRLAQLSVPNS*HKMHDF Trigger: AAAGTCATGCATTTTGTGGCAAGAGTTCGGAACCGA...CAGCTGTGCTAACCTTATTAAATGAAGTCTTTGTGTCATGTTGTGTGATGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | GGGTGCTTGTGTCTTCCTCCGGGCCGCTCAGGTATTCTTCGGGTGTaGTCGGGGCTACAGAAGCCGCCATCGGGGTCTCTGAAGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GCLCLPPGRSGILRV*SGLQKPPSGSLKPL Trigger: CAGAGGCTTCAGAGACCCCGATGGCGGCTTCTGTAGCCCCGAGCACACCCGAAGAATACCTGAGCGGCCCGGAGGAAGACACAAGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | CCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTTGCGATTGTTaGGATTCTCTTCAGCTGCCTTTGCGTTCCGGCGGCGCCGACTCT | + |
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Preference number: 5 (lower is better) Translates to: PSGSLKPLRPGSCDC*DSLQLPLRSGGADS Trigger: AGAGTCGGCGCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | CAGAAGCCGCCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTTaGGATTGTTGCGATTCTCTTCAGCTGCCTTTGCGTTCCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: QKPPSGSLKPLRPGS*DCCDSLQLPLRSGG Trigger: GCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGCGGCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CCA 90 bp | GGGGCTACAGAAGCCGCCATCGGGGTCTCTGAAGCCTCTGAGGCCTaGCTCTTGCGATTGTTGCGATTCTCTTCAGCTGCCTTTGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: GATEAAIGVSEASEA*LLRLLRFSSAAFAF Trigger: GAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGCGGCTTCTGTAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | ACGACCTTCTTCGGATCTCCAAAGATGCTGTGCTGCCTCCCAGGCTaGATCCCTAACTTCCCCAGCACTTTCCACACCAGGGCCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TTFFGSPKMLCCLPG*IPNFPSTFHTRASF Trigger: AAAGGAGGCCCTGGTGTGGAAAGTGCTGGGGAAGTTAGGGATGCAGCCTGGGAGGCAGCACAGCATCTTTGGAGATCCGAAGAAGGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | CATGGCCAGTCTTTGGAGCATCGGTTCCGAACTCTTGCCACAAAATaGATGACTTTCAGCTTGCTAGATTCCACGTGTGCTCGAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: HGQSLEHRFRTLATK*MTFSLLDSTCARGP Trigger: GGGCCCTCGAGCACACGTGGAATCTAGCAAGCTGAAAGTCATGCATTTTGTGGCAAGAGTTCGGAACCGATGCTCCAAAGACTGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | ACAAACTCTTCTGTAACGACCTTCTTCGGATCTCCAAAGATGCTGTaGTGCCTCCCAGGCTGCATCCCTAACTTCCCCAGCACTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TNSSVTTFFGSPKML*CLPGCIPNFPSTFH Trigger: GTGGAAAGTGCTGGGGAAGTTAGGGATGCAGCCTGGGAGGCAGCACAGCATCTTTGGAGATCCGAAGAAGGTCGTTACAGAAGAGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CAA 90 bp | ACCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCACTCCTGCCTCCTTTGCGCTGTaGCCCATGATGAAGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: TLPIYSMEQILWILFSTPASFAL*PMMKMR Trigger: CCTCATCTTCATCATGGGCAACAGCGCAAAGGAGGC...AGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CAA 90 bp | ATTAGCACTGGTCACAAATACCAAATACAGTGCCCTCCCCACCCTCCACAACCTTTACATGGCCAGTCTTaGGAGCATCGGTTCCGAACT | + |
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Preference number: 5 (lower is better) Translates to: ISTGHKYQIQCPPHPPQPLHGQS*EHRFRT Trigger: AGTTCGGAACCGATGCTCCAAAGACTGGCCATGTAA...AGGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGACCAGTGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CAA 90 bp | ACCCTGCCTATCTACTCCATGGAGCAGATACTTTGGATTCTCTTTTCCACTCCTCCCCTAGCACCCGAATaGAGAATAGCCTCAACCTCT | + |
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Preference number: 5 (lower is better) Translates to: TLPIYSMEQILWILFSTPPLAPE*RIASTS Trigger: AGAGGTTGAGGCTATTCTCAATTCGGGTGCTAGGGG...AGGAGTGGAAAAGAGAATCCAAAGTATCTGCTCCATGGAGTAGATAGGCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 90 bp | GTCATAGTTACATGGCCAGTCTTTGGAGCATCGGTTCCGAACTCTTaGCACAAAATGCATGACTTTCAGCTTGCTAGATTCCACGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: VIVTWPVFGASVPNS*HKMHDFQLARFHVC Trigger: GCACACGTGGAATCTAGCAAGCTGAAAGTCATGCATTTTGTGGCAAGAGTTCGGAACCGATGCTCCAAAGACTGGCCATGTAACTATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CAA 90 bp | ACAGAACAAATCTGTAATCTTCTTCCACTCACACTTTACTGGTTATTCCAAACTTCTGAGGCCTGGCTCTaGCGATTGTTGCGATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TEQICNLLPLTLYWLFQTSEAWL*RLLRFS Trigger: AGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGA...AGTTTGGAATAACCAGTAAAGTGTGAGTGGAAGAAGATTACAGATTTGTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS-3UTR CAA 90 bp | CATTACAAGACATCAGACACAAGGGAAAGACAGAACAAATCTGTAATCTTCTTCTGCATGACTTTCAGCTaGCTAGATTCCACGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: HYKTSDTRERQNKSVIFFCMTFS*LDSTCA Trigger: AGCACACGTGGAATCTAGCAAGCTGAAAGTCATGCA...GAAGAAGATTACAGATTTGTTCTGTCTTTCCCTTGTGTCTGATGTCTTGTAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 72 bp | TGTCTTCCTCCGGGCCGCTCAGGTATTCTTCGGGTGTaGTCGGGGCTACAGAAGCCGCCATCGGGGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CLPPGRSGILRV*SGLQKPPSGSL Trigger: CAGAGACCCCGATGGCGGCTTCTGTAGCCCCGAGCACACCCGAAGAATACCTGAGCGGCCCGGAGGAAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 90 bp | GCCGCCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTTGCGATaGTTGCGATTCTCTTCAGCTGCCTTTGCGTTCCGGCGGCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: AAIGVSEASEAWLLR*LRFSSAAFAFRRRR Trigger: TCGGCGCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 90 bp | GCCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTTGCGATTGTaGCGATTCTCTTCAGCTGCCTTTGCGTTCCGGCGGCGCCGACTC | + |
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Preference number: 6 (lower is better) Translates to: AIGVSEASEAWLLRL*RFSSAAFAFRRRRL Trigger: GAGTCGGCGCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 72 bp | GCTCTTGCGATTGTTGCGATTCTCTTCAGCTGCCTTTaGGTTCCGGCGGCGCCGACTCTTCCGTCCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: ALAIVAILFSCL*VPAAPTLPSPR Trigger: CCTCGGGGACGGAAGAGTCGGCGCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 72 bp | GGCCTGGCTCTTGCGATTGTTGCGATTCTCTTCAGCTaGCTTTGCGTTCCGGCGGCGCCGACTCTTCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLALAIVAILFS*LCVPAAPTLPS Trigger: GGACGGAAGAGTCGGCGCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 72 bp | GGCTCTTGCGATTGTTGCGATTCTCTTCAGCTGCCTTaGCGTTCCGGCGGCGCCGACTCTTCCGTCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GSCDCCDSLQLP*RSGGADSSVPE Trigger: CTCGGGGACGGAAGAGTCGGCGCCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 90 bp | ACAGAAGCCGCCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTaGCGATTGTTGCGATTCTCTTCAGCTGCCTTTGCGTTCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TEAAIGVSEASEAWL*RLLRFSSAAFAFRR Trigger: CCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGCGGCTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CCA 72 bp | GAAGCCGCCATCGGGGTCTCTGAAGCCTCTGAGGCCTaGCTCTTGCGATTGTTGCGATTCTCTTCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: EAAIGVSEASEA*LLRLLRFSSAA Trigger: GGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGCGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 72 bp | GTCTCTGAAGCCTCTGAGGCCTGGCTCTTGCGATTGTaGCGATTCTCTTCAGCTGCCTTTGCGTTCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: VSEASEAWLLRL*RFSSAAFAFRR Trigger: CCGCCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 72 bp | GGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTTGCGATaGTTGCGATTCTCTTCAGCTGCCTTTGCGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GVSEASEAWLLR*LRFSSAAFAFR Trigger: CCGGAACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 72 bp | GCCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTaGCGATTGTTGCGATTCTCTTCAGCTGCCTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: AIGVSEASEAWL*RLLRFSSAAFA Trigger: CGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 72 bp | CCATCGGGGTCTCTGAAGCCTCTGAGGCCTGGCTCTTaGGATTGTTGCGATTCTCTTCAGCTGCCTTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: PSGSLKPLRPGS*DCCDSLQLPLR Trigger: ACGCAAAGGCAGCTGAAGAGAATCGCAACAATCGCAAGAGCCAGGCCTCAGAGGCTTCAGAGACCCCGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS GCA 72 bp | TTCGGATCTCCAAAGATGCTGTGCTGCCTCCCAGGCTaGATCCCTAACTTCCCCAGCACTTTCCACACCAGG | + |
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Preference number: 6 (lower is better) Translates to: FGSPKMLCCLPG*IPNFPSTFHTR Trigger: CCTGGTGTGGAAAGTGCTGGGGAAGTTAGGGATGCAGCCTGGGAGGCAGCACAGCATCTTTGGAGATCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 72 bp | CCCAGCACTTTCCACACCAGGGCCTCCTTTGCGCTGTaGCCCATGATGAAGATGAGGGCTAATATGGACATT | + |
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Preference number: 6 (lower is better) Translates to: PSTFHTRASFAL*PMMKMRANMDI Trigger: AATGTCCATATTAGCCCTCATCTTCATCATGGGCAACAGCGCAAAGGAGGCCCTGGTGTGGAAAGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CAA 90 bp | CCTAACTTCCCCAGCACTTTCCACACCAGGGCCTCCTTTGCGCTGTaGCCCATGATGAAGATGAGGGCTAATATGGACATTAGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: PNFPSTFHTRASFAL*PMMKMRANMDIRRL Trigger: AAGTCTCCTAATGTCCATATTAGCCCTCATCTTCATCATGGGCAACAGCGCAAAGGAGGCCCTGGTGTGGAAAGTGCTGGGGAAGTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CCA 72 bp | GAAGAACTCATACTCCACTGGACTGCTGCGGGGCACTaGCTTATAAATCAGATACCCTCTGCGCACAAACTC | + |
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Preference number: 6 (lower is better) Translates to: EELILHWTAAGH*LINQIPSAHKL Trigger: GAGTTTGTGCGCAGAGGGTATCTGATTTATAAGCCAGTGCCCCGCAGCAGTCCAGTGGAGTATGAGTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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| CDS CCA 72 bp | CATCTGAATCCCAGTCATAGTTACATGGCCAGTCTTTaGAGCATCGGTTCCGAACTCTTGCCACAAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: HLNPSHSYMASL*SIGSELLPQNA Trigger: TGCATTTTGTGGCAAGAGTTCGGAACCGATGCTCCAAAGACTGGCCATGTAACTATGACTGGGATTCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051484.5 |
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