Pregenerated sensors for MAGEE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031224Ensembl transcript IDs: ENSMUST00000033575.7
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAGACAATTAAAGAGGATATTAGAAGGGAAGAAATGCTATTAGAATaGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KTIKEDIRREEMLLE*ECNKHKVYSFPQPS Trigger: AGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCTAATATCCTCTTTAATTGTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTGAGGGTCGTGGACCCTaGGCGCCCCCAAACGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCEGRGP*APPNVG Trigger: CCCGACGTTTGGGGGCGCTCAGGGTCCACGACCCTC...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTTCTTCAAGAGGGTCGTaGACCCTGAGCGCCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCSSRGS*TLSAPK Trigger: TTTGGGGGCGCTCAGGGTCCACGACCCTCTTGAAGA...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGGGGACTGCTCGTCGATaGGAACCTCGATGTCACTCG | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKGTARR*EPRCHS Trigger: CGAGTGACATCGAGGTTCTCATCGACGAGCAGTCCC...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGTTGGTGATTTCATGGTaGGCCCGAGGACCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKLVISW*ARGPQS Trigger: GCTCTGGGGTCCTCGGGCTCACCATGAAATCACCAA...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGGTCTCTGCGCTGCTTTaGCGCGCATTCTGGCTTACC | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKVSALL*RAFWLT Trigger: GGTAAGCCAGAATGCGCGCCAAAGCAGCGCAGAGAC...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTGGGTCCCGCACAGCCTaGGAAGCGCTGGCTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSGSRTA*EALAPC Trigger: ACAGGGAGCCAGCGCTTCCCAGGCTGTGCGGGACCC...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGACAGCAGGTCCCAAATaGAGGCCTCTCTTGCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKTAGPK*RPLLPG Trigger: ACCGGGCAAGAGAGGCCTCCATTTGGGACCTGCTGT...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGCCGATCCAGATGAGCTaGGGCTCGTCTGAGTATCTC | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKPIQMS*GSSEYL Trigger: GAGATACTCAGACGAGCCTCAGCTCATCTGGATCGG...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTAAGACCCGATCCAGATaGGCTGAGGCTCGTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCKTRSR*AEARLS Trigger: ACTCAGACGAGCCTCAGCTCATCTGGATCGGGTCTT...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGCAGCAACTCCTCAGTaGCACCAATGGCCAACTGGA | + |
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Preference number: 4 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCAATPQ*HQWPTG Trigger: TCCAGTTGGCCATTGGTGTCACTGAGGAGTTGCTGC...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGGGCATCAAGTATTCTTaGGTGGGTCTGCCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKGIKYS*VGLPRL Trigger: GAGCCTGGGCAGACCCACCCAAGAATACTTGATGCC...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACCTCAGACCTGGCCCTaGCCTCCTCATCTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQPQTWP*PPHLPQ Trigger: CTGTGGAAGATGAGGAGGCCAGGGCCAGGTCTGAGG...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTAAACTCCAGCATTTCTaGCTGTCGGATAGACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCKLQHF*LSDRPL Trigger: GAGGGGTCTATCCGACAGTCAGAAATGCTGGAGTTT...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR GCA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTAATGGAGGCCTCTCTTaGCCGGTTGCCATTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCNGGLS*PVAIQE Trigger: CTCTTGAATGGCAACCGGGCAAGAGAGGCCTCCATT...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGCTCCCTGTATTGCTCTaGCCAGTCCTGTGGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKLPVLL*PVLWLF Trigger: AAACAGCCACAGGACTGGCCAGAGCAATACAGGGAG...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR GCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGATTCTTGGGTGGGTCTaGCCAGGCTCTCTAGCATTA | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKILGWV*PGSLAL Trigger: TAATGCTAGAGAGCCTGGGCAGACCCACCCAAGAAT...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTCCTGGCTTCTCTCTTTaGCTTTGTCAGCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCPGFSL*LCQLPE Trigger: CTCTGGAAGCTGACAAAGCCAAAGAGAGAAGCCAGG...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTAACCGAAGAAGAACATaGCTGTTGCCTCAGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCNRRRT*LLPQTW Trigger: CCAGGTCTGAGGCAACAGCCATGTTCTTCTTCGGTT...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAAGAGCTGAGGCTCGTCTaGGTATCTCAGGGAACTGAT | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQELRLV*VSQGTD Trigger: ATCAGTTCCCTGAGATACTCAGACGAGCCTCAGCTC...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GTTAACACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGCAAATAGCTCATCCTaGTGGATAGGCAGCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: VNTTIDSKGEQPHDFVFGANSSS*WIGSNS Trigger: GGAGTTGCTGCCTATCCATCAGGATGAGCTATTTGC...CCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGTGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR GCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTATCGGCGGTAGTCTCTaGGCTGCTTTGGCGCGCATT | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSIGGSL*AALARI Trigger: AATGCGCGCCAAAGCAGCGCAGAGACTACCGCCGAT...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTCTCAGGGAACTGATCTaGGTATTCTTTGAGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCLRELI*VFFEKL Trigger: GAGTTTCTCAAAGAATACTCAGATCAGTTCCCTGAG...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGTTAGAGTGGCTCTGCTaGGGATATTTGGGAACACAT | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKLEWLC*GYLGTH Trigger: ATGTGTTCCCAAATATCCTCAGCAGAGCCACTCTAA...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTTCATTAGCTTACAGGTaGTGGCATGTTTCCTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCSLAYR*WHVSSL Trigger: TAGGGAGGAAACATGCCATCACCTGTAAGCTAATGA...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GTTAACACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGAGGCTTTCATTTTGGTaGTTTCATGGTGAGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VNTTIDSKGEQPHDFVFGRLSFW*FHGEPE Trigger: CTCGGGCTCACCATGAAATCACCAAAATGAAAGCCT...CCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGTGTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTCCATTCAAGAGAATATaGCCTAGGACCAAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ECNKHKVYSFPQPSQLLIPFKRI*PRTKAR Trigger: CCTGGCCTTGGTCCTAGGCCATATTCTCTTGAATGG...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTAGATCTTGGCCTCTTTaGCACGGTTGCCCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSRSWPL*HGCPSG Trigger: TCCTGATGGGCAACCGTGTCAAAGAGGCCAAGATCT...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACAGGGTTCTTCATCATaGGCCTCTGCTACAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQQGSSS*ASATNF Trigger: GAAGTTTGTAGCAGAGGCCCATGATGAAGAACCCTG...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTTGTGATTTCACTGTaGGCTCTAGAGCCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSFVISL*ALEPHR Trigger: CCTGTGGGGCTCTAGAGCTCACAGTGAAATCACAAA...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTTACTTGTTCTTCTTCTaGTTCTGGTTGGGGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ECNKHKVYSFPQPSQLLIYLFFF*FWLGDK Trigger: CTTGTCCCCCAACCAGAATCAGAAGAAGAACAAGTA...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR GCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTCCTCTCTTGCCCGGTTaGCATTCAAGAGAATATGGC | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSPLLPG*HSREYG Trigger: GCCATATTCTCTTGAATGGCAACCGGGCAAGAGAGG...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGACACCAATGGCCAACTaGACCAATTCATTTGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: DPSVHFPNALLTDVTQLKTPMAN*TNSFAL Trigger: TAAAGCAAATGAATTGGTCCAGTTGGCCATTGGTGT...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTTTTGGGAACACATCCTaGAATTCTTTGCCAGTATTA | + |
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Preference number: 4 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCFGNTS*NSLPVL Trigger: TAATACTGGCAAAGAATTCCAGGATGTGTTCCCAAA...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAAGGTAGATGTGCTCACTaGTATCAACCTCAATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQGRCAH*YQPQSE Trigger: CTCTGATTGAGGTTGATACCAGTGAGCACATCTACC...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTCTCTGGCCAGTCCTGTaGCTGTTTTCCATAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSLWPVL*LFSIEP Trigger: AGGTTCTATGGAAAACAGCCACAGGACTGGCCAGAG...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR GCA 90 bp | AGAAGGGAAGAAATGCTATTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCATCATGGGCCTCTaGTACAAACTTCAGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RREEMLLELECNKHKVYSFIMGL*YKLQGF Trigger: GAAGCCCTGAAGTTTGTAGCAGAGGCCCATGATGAA...AGAGTACACCTTGTGTTTATTGCATTCCAATTCTAATAGCATTTCTTCCCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTTTTGTTATATTCTTCTaGCCAGCTCCAGGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ECNKHKVYSFPQPSQLLIFVIFF*PAPGFF Trigger: GAAGAACCCTGGAGCTGGCCAGAAGAATATAACAAA...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAATCTGCTGAGGATATTTaGGAACACATCCTGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQSAEDI*EHILEF Trigger: GAATTCCAGGATGTGTTCCCAAATATCCTCAGCAGA...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAAGATCAAACCCAGGATTaGCATCAAGTATTCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQDQTQD*HQVFLG Trigger: ACCCAAGAATACTTGATGCCAATCCTGGGTTTGATC...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR TCA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTAGTATCTCAGGGAACTaGTCTGAGTATTCTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ECNKHKVYSFPQPSQLLISISGN*SEYSLR Trigger: TCTCAAAGAATACTCAGATCAGTTCCCTGAGATACT...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAAATTAGTGCCATATACTaGCCAGTACTCCAAAAATCG | + |
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Preference number: 4 (lower is better) Translates to: LELECNKHKVYSFPQPSQISAIY*PVLQKS Trigger: CGATTTTTGGAGTACTGGCCAGTATATGGCACTAAT...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTTCAACACTGAATCTCTaGAGTAAGTTCCAGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: ECNKHKVYSFPQPSQLLISTLNL*SKFQIL Trigger: CAAGATCTGGAACTTACTCCAGAGATTCAGTGTTGA...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CCA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTTCCAAAAATCGCATATaGACAAAGTCAATAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: ECNKHKVYSFPQPSQLLISKNRI*TKSIVR Trigger: CCTTACTATTGACTTTGTCCATATGCGATTTTTGGA...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 90 bp | TGGGAAGCGCTGGCTCCCTGTGGATCGTTTGGAATCTCAGGGCCCTaGGGAGCTTCGAGGGCTAGCATGGAGGTGGCAGGCCCGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: WEALAPCGSFGISGP*GASRASMEVAGPEA Trigger: TGCCTCCGGGCCTGCCACCTCCATGCTAGCCCTCGAAGCTCCCCAGGGCCCTGAGATTCCAAACGATCCACAGGGAGCCAGCGCTTCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 90 bp | TCTTCAAGAGGGTCGTGGACCCTGAGCGCCCCCAAACGTCGGGACTaGTCGTCGATGAGAACCTCGATGTCACTCGGGTCCCGCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSRGSWTLSAPKRRD*SSMRTSMSLGSRTA Trigger: GGCTGTGCGGGACCCGAGTGACATCGAGGTTCTCATCGACGAGCAGTCCCGACGTTTGGGGGCGCTCAGGGTCCACGACCCTCTTGAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 90 bp | TGCTCGTCGATGAGAACCTCGATGTCACTCGGGTCCCGCACAGCCTaGGAAGCGCTGGCTCCCTGTGGATCGTTTGGAATCTCAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CSSMRTSMSLGSRTA*EALAPCGSFGISGP Trigger: GGGCCCTGAGATTCCAAACGATCCACAGGGAGCCAGCGCTTCCCAGGCTGTGCGGGACCCGAGTGACATCGAGGTTCTCATCGACGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 90 bp | CGCATGAAATTCACTAAAGCAACCGACCTCTCTTCAAGAGGGTCGTaGACCCTGAGCGCCCCCAAACGTCGGGACTGCTCGTCGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: RMKFTKATDLSSRGS*TLSAPKRRDCSSMR Trigger: TCTCATCGACGAGCAGTCCCGACGTTTGGGGGCGCTCAGGGTCCACGACCCTCTTGAAGAGAGGTCGGTTGCTTTAGTGAATTTCATGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 90 bp | TCTGAGACCCATCTATCACATCCACCTTTAACAGCAGGTCCCAAATaGAGGCCTCTCTTGCCCGGTTGCCATTCAAGAGAATATGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: SETHLSHPPLTAGPK*RPLLPGCHSREYGL Trigger: TAGGCCATATTCTCTTGAATGGCAACCGGGCAAGAGAGGCCTCCATTTGGGACCTGCTGTTAAAGGTGGATGTGATAGATGGGTCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGAGTCTCTGCGCTGCTTaGGCGCGCATTCTGGCTTAC | + |
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Preference number: 5 (lower is better) Translates to: DPSVHFPNALLTDVTQLKSLCAA*ARILAY Trigger: GTAAGCCAGAATGCGCGCCAAAGCAGCGCAGAGACT...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 90 bp | GTTATATTCTTCTGGCCAGCTCCAGGGTTCTTCATCATGGGCCTCTaGTACAAACTTCAGGGCTTCCATCTTTGTGATTTCACTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: VIFFWPAPGFFIMGL*YKLQGFHLCDFTVS Trigger: GCTCACAGTGAAATCACAAAGATGGAAGCCCTGAAGTTTGTAGCAGAGGCCCATGATGAAGAACCCTGGAGCTGGCCAGAAGAATATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTCTCCCTGTGGATCGTTaGGAATCTCAGGGCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ECNKHKVYSFPQPSQLLILPVDR*ESQGPG Trigger: CCCAGGGCCCTGAGATTCCAAACGATCCACAGGGAG...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GACCCTAGTGTCCATTTCCCAAATGCCCTTTTAACAGATGTCACTCAACTAAAGCAGATCTTGGCCTCTTaGACACGGTTGCCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: DPSVHFPNALLTDVTQLKQILAS*TRLPIR Trigger: CCTGATGGGCAACCGTGTCAAAGAGGCCAAGATCTG...CTTTAGTTGAGTGACATCTGTTAAAAGGGCATTTGGGAAATGGACACTAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 90 bp | GGAAGATCAAACCCAGGATTGGCATCAAGTATTCTTGGGTGGGTCTaGCCAGGCTCTCTAGCATTACTTGTTCTTCTTCTGATTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GRSNPGLASSILGWV*PGSLALLVLLLILV Trigger: AACCAGAATCAGAAGAAGAACAAGTAATGCTAGAGAGCCTGGGCAGACCCACCCAAGAATACTTGATGCCAATCCTGGGTTTGATCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | ACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGCCTGGCTTCTCTCTTaGGCTTTGTCAGCTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TTIDSKGEQPHDFVFGVCAWLLS*ALSASR Trigger: TCTGGAAGCTGACAAAGCCAAAGAGAGAAGCCAGGC...ACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTGCCTCTTTGACACGGTaGCCCATCAGGAAGATCAAA | + |
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Preference number: 5 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCASLTR*PIRKIK Trigger: TTTGATCTTCCTGATGGGCAACCGTGTCAAAGAGGC...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAAAGAAGAACATGGCTGTaGCCTCAGACCTGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LELECNKHKVYSFPQPSQRRTWL*PQTWPW Trigger: CCAGGGCCAGGTCTGAGGCAACAGCCATGTTCTTCT...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 90 bp | AGAGCTTTGTTATATTCTTCTGGCCAGCTCCAGGGTTCTTCATCATaGGCCTCTGCTACAAACTTCAGGGCTTCCATCTTTGTGATTTCA | + |
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Preference number: 5 (lower is better) Translates to: RALLYSSGQLQGSSS*ASATNFRASIFVIS Trigger: TGAAATCACAAAGATGGAAGCCCTGAAGTTTGTAGCAGAGGCCCATGATGAAGAACCCTGGAGCTGGCCAGAAGAATATAACAAAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GTTAACACAACAATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGCCTCTCTTGCCCGGTaGCCATTCAAGAGAATATGG | + |
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Preference number: 5 (lower is better) Translates to: VNTTIDSKGEQPHDFVFGASLAR*PFKRIW Trigger: CCATATTCTCTTGAATGGCAACCGGGCAAGAGAGGC...CCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTATTGTTGTGTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTTGGCATCAAGTATTCTaGGGTGGGTCTGCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ECNKHKVYSFPQPSQLLIWHQVF*GGSAQA Trigger: AGCCTGGGCAGACCCACCCAAGAATACTTGATGCCA...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | ATAGACTCAAAAGGAGAGCAACCACATGACTTTGTGTTTGGGGTGTGTGTGTGTAGTAAGTTCCAGATCTaGGCCTCTTTGACACGGTTG | + |
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Preference number: 5 (lower is better) Translates to: IDSKGEQPHDFVFGVCVCSKFQI*ASLTRL Trigger: CAACCGTGTCAAAGAGGCCAAGATCTGGAACTTACT...ACACACACACACCCCAAACACAAAGTCATGTGGTTGCTCTCCTTTTGAGTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTAAATGGAGGCCTCTCTaGCCCGGTTGCCATTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: ECNKHKVYSFPQPSQLLIKWRPL*PGCHSR Trigger: TCTTGAATGGCAACCGGGCAAGAGAGGCCTCCATTT...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | TTAGAATTGGAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAAAGATCAAACCCAGGATaGGCATCAAGTATTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LELECNKHKVYSFPQPSQRSNPG*ASSILG Trigger: CCCAAGAATACTTGATGCCAATCCTGGGTTTGATCT...TTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTCCAATTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS-3UTR CAA 90 bp | GAATGCAATAAACACAAGGTGTACTCTTTCCCACAACCCTCTCAACTTTTGATTACATCCTGGAATTCTTaGCCAGTATTAGCAAATAGC | + |
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Preference number: 5 (lower is better) Translates to: ECNKHKVYSFPQPSQLLITSWNS*PVLANS Trigger: GCTATTTGCTAATACTGGCAAAGAATTCCAGGATGT...AATCAAAAGTTGAGAGGGTTGTGGGAAAGAGTACACCTTGTGTTTATTGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | CGGGTCCCGCACAGCCTGGGAAGCGCTGGCTCCCTGTaGATCGTTTGGAATCTCAGGGCCCTGGGGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RVPHSLGSAGSL*IVWNLRALGSF Trigger: GAAGCTCCCCAGGGCCCTGAGATTCCAAACGATCCACAGGGAGCCAGCGCTTCCCAGGCTGTGCGGGACCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 72 bp | GGGTCGTGGACCCTGAGCGCCCCCAAACGTCGGGACTaGTCGTCGATGAGAACCTCGATGTCACTCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GSWTLSAPKRRD*SSMRTSMSLGS Trigger: GGACCCGAGTGACATCGAGGTTCTCATCGACGAGCAGTCCCGACGTTTGGGGGCGCTCAGGGTCCACGACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | CGATGTCACTCGGGTCCCGCACAGCCTGGGAAGCGCTaGCTCCCTGTGGATCGTTTGGAATCTCAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RCHSGPAQPGKR*LPVDRLESQGP Trigger: AGGGCCCTGAGATTCCAAACGATCCACAGGGAGCCAGCGCTTCCCAGGCTGTGCGGGACCCGAGTGACATCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CAA 72 bp | GCACAGCCTGGGAAGCGCTGGCTCCCTGTGGATCGTTaGGAATCTCAGGGCCCTGGGGAGCTTCGAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: AQPGKRWLPVDR*ESQGPGELRGL Trigger: TAGCCCTCGAAGCTCCCCAGGGCCCTGAGATTCCAAACGATCCACAGGGAGCCAGCGCTTCCCAGGCTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | ATGAGAACCTCGATGTCACTCGGGTCCCGCACAGCCTaGGAAGCGCTGGCTCCCTGTGGATCGTTTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: MRTSMSLGSRTA*EALAPCGSFGI Trigger: GATTCCAAACGATCCACAGGGAGCCAGCGCTTCCCAGGCTGTGCGGGACCCGAGTGACATCGAGGTTCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | TTCACTAAAGCAACCGACCTCTCTTCAAGAGGGTCGTaGACCCTGAGCGCCCCCAAACGTCGGGACTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: FTKATDLSSRGS*TLSAPKRRDCS Trigger: CGAGCAGTCCCGACGTTTGGGGGCGCTCAGGGTCCACGACCCTCTTGAAGAGAGGTCGGTTGCTTTAGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 72 bp | TTCACCCTGGCTGTTGCTGTAATCGGCGGTAGTCTCTaGGCTGCTTTGGCGCGCATTCTGGCTTACCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: FTLAVAVIGGSL*AALARILAYQR Trigger: TCTCTGGTAAGCCAGAATGCGCGCCAAAGCAGCGCAGAGACTACCGCCGATTACAGCAACAGCCAGGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CAA 72 bp | GAATATGGCCTAGGACCAAGGCCAGGAGACCCGCTTTaGGTATGTCCAGGGTCTCTGCTAGCCGTTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: EYGLGPRPGDPL*VCPGSLLAVQW Trigger: CCACTGAACGGCTAGCAGAGACCCTGGACATACCAAAAGCGGGTCTCCTGGCCTTGGTCCTAGGCCATATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CAA 90 bp | CATTCAAGAGAATATGGCCTAGGACCAAGGCCAGGAGACCCGCTTTaGGTATGTCCAGGGTCTCTGCTAGCCGTTCAGTGGTCTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: HSREYGLGPRPGDPL*VCPGSLLAVQWSGD Trigger: GTCCCCAGACCACTGAACGGCTAGCAGAGACCCTGGACATACCAAAAGCGGGTCTCCTGGCCTTGGTCCTAGGCCATATTCTCTTGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CAA 90 bp | TCCACCTTTAACAGCAGGTCCCAAATGGAGGCCTCTCTTGCCCGGTaGCCATTCAAGAGAATATGGCCTAGGACCAAGGCCAGGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: STFNSRSQMEASLAR*PFKRIWPRTKARRP Trigger: GGGTCTCCTGGCCTTGGTCCTAGGCCATATTCTCTTGAATGGCAACCGGGCAAGAGAGGCCTCCATTTGGGACCTGCTGTTAAAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CAA 72 bp | AACAGCAGGTCCCAAATGGAGGCCTCTCTTGCCCGGTaGCCATTCAAGAGAATATGGCCTAGGACCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: NSRSQMEASLAR*PFKRIWPRTKA Trigger: GGCCTTGGTCCTAGGCCATATTCTCTTGAATGGCAACCGGGCAAGAGAGGCCTCCATTTGGGACCTGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 72 bp | GCTCGTATTCAACTGGATTCGAGTAGGAGAGCGGCCTaGATTCTAGGTAGCGTTGCCTCATTAGCTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: ARIQLDSSRRAA*ILGSVASLAYR Trigger: CCTGTAAGCTAATGAGGCAACGCTACCTAGAATGCAGGCCGCTCTCCTACTCGAATCCAGTTGAATACGAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | GGCTTTGTCAGCTTCCAGAGCTTTGTTATATTCTTCTaGCCAGCTCCAGGGTTCTTCATCATGGGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GFVSFQSFVIFF*PAPGFFIMGLC Trigger: GCAGAGGCCCATGATGAAGAACCCTGGAGCTGGCCAGAAGAATATAACAAAGCTCTGGAAGCTGACAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS GCA 72 bp | TTCTGGCCAGCTCCAGGGTTCTTCATCATGGGCCTCTaGTACAAACTTCAGGGCTTCCATCTTTGTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: FWPAPGFFIMGL*YKLQGFHLCDF Trigger: GAAATCACAAAGATGGAAGCCCTGAAGTTTGTAGCAGAGGCCCATGATGAAGAACCCTGGAGCTGGCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | CATCTATCACATCCACCTTTAACAGCAGGTCCCAAATaGAGGCCTCTCTTGCCCGGTTGCCATTCAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: HLSHPPLTAGPK*RPLLPGCHSRE Trigger: TTCTCTTGAATGGCAACCGGGCAAGAGAGGCCTCCATTTGGGACCTGCTGTTAAAGGTGGATGTGATAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | AGGAAGATCAAACCCAGGATTGGCATCAAGTATTCTTaGGTGGGTCTGCCCAGGCTCTCTAGCATTACTTGT | + |
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Preference number: 6 (lower is better) Translates to: RKIKPRIGIKYS*VGLPRLSSITC Trigger: ACAAGTAATGCTAGAGAGCCTGGGCAGACCCACCCAAGAATACTTGATGCCAATCCTGGGTTTGATCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | TTATATTCTTCTGGCCAGCTCCAGGGTTCTTCATCATaGGCCTCTGCTACAAACTTCAGGGCTTCCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LYSSGQLQGSSS*ASATNFRASIF Trigger: AAAGATGGAAGCCCTGAAGTTTGTAGCAGAGGCCCATGATGAAGAACCCTGGAGCTGGCCAGAAGAATATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | AGATCAAACCCAGGATTGGCATCAAGTATTCTTGGGTaGGTCTGCCCAGGCTCTCTAGCATTACTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RSNPGLASSILG*VCPGSLALLVL Trigger: AAGAACAAGTAATGCTAGAGAGCCTGGGCAGACCCACCCAAGAATACTTGATGCCAATCCTGGGTTTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | ATTCTGGTTGGGGGACAAGGAGGTAGATGTGCTCACTaGTATCAACCTCAATCAGAGAGAACCCATAAAACA | + |
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Preference number: 6 (lower is better) Translates to: ILVGGQGGRCAH*YQPQSERTHKT Trigger: TGTTTTATGGGTTCTCTCTGATTGAGGTTGATACCAGTGAGCACATCTACCTCCTTGTCCCCCAACCAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS CCA 72 bp | AGAGTGGCTCTGCTGAGGATATTTGGGAACACATCCTaGAATTCTTTGCCAGTATTAGCAAATAGCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: RVALLRIFGNTS*NSLPVLANSSS Trigger: GGATGAGCTATTTGCTAATACTGGCAAAGAATTCCAGGATGTGTTCCCAAATATCCTCAGCAGAGCCACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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| CDS TCA 72 bp | ACCCATAAAACAGATCAAGGATTAGAGTGGCTCTGCTaGGGATATTTGGGAACACATCCTGGAATTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: THKTDQGLEWLC*GYLGTHPGILC Trigger: GCAAAGAATTCCAGGATGTGTTCCCAAATATCCTCAGCAGAGCCACTCTAATCCTTGATCTGTTTTATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033575.7 |
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