Pregenerated sensors for MAGEE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031227Ensembl transcript IDs: ENSMUST00000033578.7
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACAAGATGGAAAGAGTCCTAAAACACTTTATAACACTATCAAAATaGTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATC | + |
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Preference number: 1 (lower is better) Translates to: NKMERVLKHFITLSK*SQHKVHQRDSKWSI Trigger: GATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTGATAGTGTTATAAAGTGTTTTAGGACTCTTTCCATCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| 3UTR CCA 90 bp | CTATCAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTaGTCAATCACATTTACATTAATGGACAGTATTACTAAAACAATG | + |
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Preference number: 1 (lower is better) Translates to: LSKCSQHKVHQRDSK*SITFTLMDSITKTM Trigger: CATTGTTTTAGTAATACTGTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTGATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTTCTCTTTCAGACAATaGAACAAGATGGAAAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: ADKREASHNLVLCQLFYIFSFRQ*NKMERV Trigger: GACTCTTTCCATCTTGTTGCATTGTCTGAAAGAGAA...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTATAACACTATCAAAATaGTCACAGCACAAAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: ADKREASHNLVLCQLFYIITLSK*SQHKVH Trigger: GTGTACTTTGTGCTGTGAGCATTTTGATAGTGTTAT...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| 3UTR CCA 72 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTaGTCAATCACATTTACATTAATGGACAGTATTACT | + |
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Preference number: 3 (lower is better) Translates to: CSQHKVHQRDSK*SITFTLMDSIT Trigger: AGTAATACTGTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| 3UTR GCA 72 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTaGTATATGTTCTCTTTCAGACAATGCAACAAGATG | + |
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Preference number: 3 (lower is better) Translates to: QAFKEKPISIAI*YMFSFRQCNKM Trigger: CATCTTGTTGCATTGTCTGAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CCCAACACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTGACCCTTCCTGGAGGTaGGCATCTCGGAGGTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: PNTHTHPLLIHENQSSRPDPSWR*ASRRCS Trigger: CGAACACCTCCGAGATGCCCACCTCCAGGAAGGGTC...AGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGTGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | ACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTGGCCATCTCAGCAGAAATGGATaGCAGGGACGAGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: THTHPLLIHENQSSRPGHLSRNG*QGRAQA Trigger: GGCCTGAGCTCGTCCCTGTCATCCATTTCTGCTGAG...ATGGCCAGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACACCCTCCCCCAGGCAGTaGAGCTCCGAGGTGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: CSQHKVHQRDSKWSITFTPSPRQ*SSEVLR Trigger: CCGGAGCACCTCGGAGCTGCACTGCCTGGGGGAGGG...TGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTGGGCAGCATGGAGGTaGCAGGGCCCTCAGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: QNAHSTKYTRETVSGQSHWAAWR*QGPQRR Trigger: GCGCCTCTGAGGGCCCTGGCACCTCCATGCTGCCCA...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | CACAATAGCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTGGGCCCCCATCAGAGTaGCGCTGCTCAGAGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: HNSRQKGSQPQLSTLSVVGPPSE*RCSEMA Trigger: GGCCATCTCTGAGCAGCGTCACTCTGATGGGGGCCC...AACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGCTATTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACAATCCCGAGGGACGTCTaGGCCTGGCACAGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CSQHKVHQRDSKWSITFTIPRDV*AWHSSR Trigger: CCTGCTGCTGTGCCAGGCCCAGACGTCCCTCGGGAT...TGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CCCAACACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTAGCCCTCAGCAGAAATaGATGACAGGGACGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PNTHTHPLLIHENQSSRPSPQQK*MTGTSS Trigger: TGAGCTCGTCCCTGTCATCCATTTCTGCTGAGGGCT...AGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGTGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTCCCTCCGCAGCGCATaGCGCCAGCGAGCTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QNAHSTKYTRETVSGQSHSLRSA*RQRAAE Trigger: TTCTGCAGCTCGCTGGCGCCATGCGCTGCGGAGGGA...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CCCAACACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTTCTGGCTCCTTTCTGTaGATTCGGGCCACATATCGC | + |
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Preference number: 4 (lower is better) Translates to: PNTHTHPLLIHENQSSRPSGSFL*IRATYR Trigger: GCGATATGTGGCCCGAATCCACAGAAAGGAGCCAGA...AGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGTGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTCAGCCCTGCGGAAACTaGAGGAGGCCGGGAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFQPCGN*RRPGGA Trigger: GGCGCCTCCCGGCCTCCTGCAGTTTCCGCAGGGCTG...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | CCCAACACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTATAGGGTACTTGGTCTaGTCCTTCAGCAGCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: PNTHTHPLLIHENQSSRPIGYLV*SFSSRN Trigger: GTTTCTGCTGCTGAAGGATCAGACCAAGTACCCTAT...AGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGTGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | ACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTGGCCATGTTCAAACCGAAAAATaGACTCCAGGTGGACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: THTHPLLIHENQSSRPGHVQTEK*TPGGLL Trigger: CAGCAGTCCACCTGGAGTGCATTTTTCGGTTTGAAC...ATGGCCAGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTAGCCCTCTGAGGCGGTaGGCGGCACAGAGGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFSPLRR*AAQRRL Trigger: CAAGCGCCTCTGTGCCGCCCACCGCCTCAGAGGGCT...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CCCAACACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTGAATTTTCATCTTGGTaGTTTCTGCGCGGGATCGTG | + |
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Preference number: 4 (lower is better) Translates to: PNTHTHPLLIHENQSSRPEFSSW*FLRGIV Trigger: CACGATCCCGCGCAGAAACCACCAAGATGAAAATTC...AGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGTGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTGGCACAGCAGCAGGGTaGCCCTTCCCGTTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIGTAAG*PFPLFL Trigger: CAGAAACAACGGGAAGGGTCACCCTGCTGCTGTGCC...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATATGGCGCCAGCGAGCTaGAGAAGCCCTCAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QNAHSTKYTRETVSGQSHMAPAS*RSPQQK Trigger: TTTCTGCTGAGGGCTTCTGCAGCTCGCTGGCGCCAT...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CACAATAGCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTATTGCCTCCCTGTACTaGTCCGGCCAGTCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HNSRQKGSQPQLSTLSVVIASLY*SGQSSG Trigger: GCCAGAAGACTGGCCGGAGCAGTACAGGGAGGCAAT...AACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGCTATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACAGGCCTCATCTTCCATTaGCTCCCTGTACTGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: CSQHKVHQRDSKWSITFTGLIFH*LPVLLR Trigger: CCGGAGCAGTACAGGGAGGCAATGGAAGATGAGGCC...TGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTAGGGACGTCTGGGCCTaGCACAGCAGCAGGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFRDVWA*HSSRVT Trigger: GGTCACCCTGCTGCTGTGCCAGGCCCAGACGTCCCT...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACAGCAGGGCTTTCATCTTaGAGGTTTCCAGGCGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CSQHKVHQRDSKWSITFTAGLSS*RFPGGL Trigger: GAGCCCGCCTGGAAACCTCCAAGATGAAAGCCCTGC...TGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTAGCGGTGTTCAGCCCTaGGGAAACTGCAGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFSGVQP*GNCRRP Trigger: CGGCCTCCTGCAGTTTCCGCAGGGCTGAACACCGCT...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTGATGGCCAGCCCTTCTaGGACAGGGAGATGCTCATA | + |
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Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIDGQPF*DREMLI Trigger: TATGAGCATCTCCCTGTCTCAGAAGGGCTGGCCATC...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACATTAATGGACGACGCTGCTCAGAGATaGCCAGCCCTTCTGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: HKVHQRDSKWSITFTLMDDAAQR*PALLRQ Trigger: CTGTCTCAGAAGGGCTGGCCATCTCTGAGCAGCGTC...GTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CACAATAGCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCCCTTCAAAGGGCACTaGTCCCAGTTTGTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HNSRQKGSQPQLSTLSVVPFKGH*SQFVEQ Trigger: CTGCTCAACAAACTGGGACCAGTGCCCTTTGAAGGG...AACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGCTATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CACAATAGCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTTCTGTGCCATACACGTaGTTTAGGGTGCGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HNSRQKGSQPQLSTLSVVSVPYT*FRVRAA Trigger: TGCTGCTCGCACCCTAAACCACGTGTATGGCACAGA...AACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGCTATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTCTGATGGCACCGAGGTaGGCAGTCCCTTTTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFLMAPR*AVPFWR Trigger: CCTCCAAAAAGGGACTGCGCACCTCGGTGCCATCAG...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACATTAATGGACCTCCGGCCAGTCTTCTaGCTCCTTTCTGTGGATTCG | + |
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Preference number: 4 (lower is better) Translates to: HKVHQRDSKWSITFTLMDLRPVF*LLSVDS Trigger: CGAATCCACAGAAAGGAGCCAGAAGACTGGCCGGAG...GTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | CACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACATTAATGGACATGCTCATAGGCCTTTaGGCCTTTAGGAGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HKVHQRDSKWSITFTLMDMLIGL*AFRSSG Trigger: CCCACTGCTCCTAAAGGCTCAAAGGCCTATGAGCAT...GTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACACTCTGGAGCAACTTCTaGAAAAAGGGGCCTCCTAAA | + |
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Preference number: 4 (lower is better) Translates to: CSQHKVHQRDSKWSITFTLWSNF*KKGPPK Trigger: TTTAGGAGGCCCCTTTTTGCAGAAGTTGCTCCAGAG...TGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACATTAATGGACCAAGAGGCCCATCTTTaGCCCATTTGGGACGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HKVHQRDSKWSITFTLMDQEAHL*PIWDVF Trigger: GAAGACGTCCCAAATGGGCCAAAGATGGGCCTCTTG...GTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTGATCAGGGAACACTTTaGTGCACTCTCGACCGATGT | + |
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Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIDQGTL*CTLDRC Trigger: ACATCGGTCGAGAGTGCACCAAAGTGTTCCCTGATC...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTGCAGACTCCCTCGCATaGTTGCCCATGATAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIADSLA*LPMIKM Trigger: CATCTTTATCATGGGCAACCATGCGAGGGAGTCTGC...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | CACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACATTAATGGACCTGGTCCCAGTTTGTTaGGCAGGATGTAGATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: HKVHQRDSKWSITFTLMDLVPVC*AGCRCA Trigger: AGCACATCTACATCCTGCTCAACAAACTGGGACCAG...GTCCATTAATGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCTGGGAAATGATGAACTaGCTAGGGGCGCTTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QAFKEKPISIAICYMFSFWEMMN*LGALEP Trigger: GGGCTCAAGCGCCCCTAGGCAGTTCATCATTTCCCA...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCAGGTGCTCTTGTTCCTaGGCTCAGAAGCACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QAFKEKPISIAICYMFSFRCSCS*AQKHSS Trigger: GCTGCTGTGCTTCTGAGCGCAGGAACAAGAGCACCT...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTCAGGGAACACTTTGGTaGACTCTCGACCGATGTAAT | + |
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Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIQGTLW*TLDRCN Trigger: ATTACATCGGTCGAGAGTGCACCAAAGTGTTCCCTG...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTACACGTGGTTTAGGGTaGGAGCAGCACGATTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFTRGLG*EQHDSG Trigger: TCCTGAATCGTGCTGCTCGCACCCTAAACCACGTGT...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTGACTCAGGCCAAGAATaGGGAGAATATTTTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIDSGQE*GEYFEP Trigger: TGGCTCAAAATATTCTCCCCATTCTTGGCCTGAGTC...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTCAGCAGCAGAAACTaGAACAATTCTGCTACGTTT | + |
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Preference number: 4 (lower is better) Translates to: QNAHSTKYTRETVSGQSHFSSRN*NNSATF Trigger: AAACGTAGCAGAATTGTTGCAGTTTCTGCTGCTGAA...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATATCAGCAGAAATAACTaGACCAATTTCCTTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QNAHSTKYTRETVSGQSHISRNN*TNFLAL Trigger: CAAGGCAAGGAAATTGGTCCAGTTATTTCTGCTGAT...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTGCATTAAGAAATTGTTaGCGGGCCTGTTTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFALRNC*RACLDC Trigger: ACAGTCCAAACAGGCCCGGCAACAATTTCTTAATGC...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR GCA 90 bp | GCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTCATACAAAATCATATTaGACCGGATCACTGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADKREASHNLVLCQLFYIHTKSY*TGSLSG Trigger: TCCTGACAGTGATCCGGTGCAATATGATTTTGTATG...AATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CCA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCTCAGAATTTTCATCTTaGTGGTTTCTGCGCGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QAFKEKPISIAICYMFSFSEFSS*WFLRGI Trigger: GATCCCGCGCAGAAACCACCAAGATGAAAATTCTGA...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR TCA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCTGTTTGGACTGTCCATaGTCTCTTCTGTATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QAFKEKPISIAICYMFSFCLDCP*SLLYLP Trigger: TGGAAGATACAGAAGAGATCATGGACAGTCCAAACA...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | CGTCTGGGCCTGGCACAGCAGCAGGGTGACCCTTCCCGTTGTTTCTaGGCGCATTGGCCCTTCCACCGCGGCGGCGGCGCGAATTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLGLAQQQGDPSRCF*AHWPFHRGGGANSG Trigger: GCCAGAATTCGCGCCGCCGCCGCGGTGGAAGGGCCAATGCGCGCAGAAACAACGGGAAGGGTCACCCTGCTGCTGTGCCAGGCCCAGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | CCGCAGCGCATGGCGCCAGCGAGCTGCAGAAGCCCTCAGCAGAAATaGATGACAGGGACGAGCTCAGGCCCTCGGCTGAGGTGCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRMAPASCRSPQQK*MTGTSSGPRLRCSG Trigger: GCCCGAGCACCTCAGCCGAGGGCCTGAGCTCGTCCCTGTCATCCATTTCTGCTGAGGGCTTCTGCAGCTCGCTGGCGCCATGCGCTGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 90 bp | AGCAGTGGGCGGCACAGGGCTATTCGGGCCCTCCGAGGCGGTGATTaGCATAGCGGTGTTCAGCCCTGCGGAAACTGCAGGAGGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSGRHRAIRALRGGD*HSGVQPCGNCRRPG Trigger: TCCCGGCCTCCTGCAGTTTCCGCAGGGCTGAACACCGCTATGTCAATCACCGCCTCGGAGGGCCCGAATAGCCCTGTGCCGCCCACTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 90 bp | GGGCCCTCACCCAGGGTGGGCTCCATGTTAGGGCCCCCATCAGAGTaGCGCTGCTCAGAGATGGCCAGCCCTTCTGAGACAGGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: GPSPRVGSMLGPPSE*RCSEMASPSETGRC Trigger: GCATCTCCCTGTCTCAGAAGGGCTGGCCATCTCTGAGCAGCGTCACTCTGATGGGGGCCCTAACATGGAGCCCACCCTGGGTGAGGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | CAGCAGAAATGGATGACAGGGACGAGCTCAGGCCCTCGGCTGAGGTaGTCGGGCTCTCACAAGCAGCTGATGGCACCGAGGTGCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQKWMTGTSSGPRLR*SGSHKQLMAPRCAV Trigger: GACTGCGCACCTCGGTGCCATCAGCTGCTTGTGAGAGCCCGAGCACCTCAGCCGAGGGCCTGAGCTCGTCCCTGTCATCCATTTCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | GAAGCAGCTCACAGGATCCCTCCGCAGCGCATGGCGCCAGCGAGCTaGAGAAGCCCTCAGCAGAAATGGATGACAGGGACGAGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAAHRIPPQRMAPAS*RSPQQKWMTGTSSG Trigger: GCCTGAGCTCGTCCCTGTCATCCATTTCTGCTGAGGGCTTCTGCAGCTCGCTGGCGCCATGCGCTGCGGAGGGATCCTGTGAGCTGCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | GAGGCCCTGGAGGATCTTAGGATCGTTGCGATCCCGAGGGACGTCTaGGCCTGGCACAGCAGCAGGGTGACCCTTCCCGTTGTTTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: EALEDLRIVAIPRDV*AWHSSRVTLPVVSA Trigger: CGCAGAAACAACGGGAAGGGTCACCCTGCTGCTGTGCCAGGCCCAGACGTCCCTCGGGATCGCAACGATCCTAAGATCCTCCAGGGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | AGATGCTCAAGCCCTCATCAGAAATGCCCGATTCCTCAGAGAAGGTaGGCGGCACCGAGATTCCCGGGCCCTCACCCAGGGTGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RCSSPHQKCPIPQRR*AAPRFPGPHPGWAP Trigger: TGGAGCCCACCCTGGGTGAGGGCCCGGGAATCTCGGTGCCGCCCACCTTCTCTGAGGAATCGGGCATTTCTGATGAGGGCTTGAGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | CTGGAGGATCTTAGGATCGTTGCGATCCCGAGGGACGTCTGGGCCTaGCACAGCAGCAGGGTGACCCTTCCCGTTGTTTCTGCGCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LEDLRIVAIPRDVWA*HSSRVTLPVVSARI Trigger: AATGCGCGCAGAAACAACGGGAAGGGTCACCCTGCTGCTGTGCCAGGCCCAGACGTCCCTCGGGATCGCAACGATCCTAAGATCCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | GTTGATGCCCAGTCCATTAGAGTCAGTGGGCGGCACCGAAGTGCTTaGGTCCTCACTAACGGAGTAGGGCTCGTTGATACCCGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VDAQSIRVSGRHRSA*VLTNGVGLVDTRSL Trigger: GAGGGACCGGGTATCAACGAGCCCTACTCCGTTAGTGAGGACCCAAGCACTTCGGTGCCGCCCACTGACTCTAATGGACTGGGCATCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | ACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTGGCCATGCACGGGAGGTGCTCTaGTTCCTGCGCTCAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: THTHPLLIHENQSSRPGHAREVL*FLRSEA Trigger: TGCTTCTGAGCGCAGGAACAAGAGCACCTCCCGTGC...ATGGCCAGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | ACAGGGTGTAGGAGTGGTTCCTGGGATCAAGGACCACTAGCTCTGTaGCATACACGTGGTTTAGGGTGCGAGCAGCACGATTCAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGCRSGSWDQGPLAL*HTRGLGCEQHDSGD Trigger: ATCTCCTGAATCGTGCTGCTCGCACCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCAGGAACCACTCCTACACCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | GAGTGGTTCCTGGGATCAAGGACCACTAGCTCTGTGCCATACACGTaGTTTAGGGTGCGAGCAGCACGATTCAGGAGATCAGGGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: EWFLGSRTTSSVPYT*FRVRAARFRRSGNT Trigger: AGTGTTCCCTGATCTCCTGAATCGTGCTGCTCGCACCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCAGGAACCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | TGGGATCAAGGACCACTAGCTCTGTGCCATACACGTGGTTTAGGGTaGGAGCAGCACGATTCAGGAGATCAGGGAACACTTTGGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: WDQGPLALCHTRGLG*EQHDSGDQGTLWCT Trigger: AGTGCACCAAAGTGTTCCCTGATCTCCTGAATCGTGCTGCTCGCACCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CCCAACACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTTCAAGAGGCCCATCTTaGGCCCATTTGGGACGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PNTHTHPLLIHENQSSRPSRGPS*AHLGRL Trigger: AAGACGTCCCAAATGGGCCAAAGATGGGCCTCTTGA...AGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGTGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | CCCATAATGGTGATGGAGTTGGAATTCTTACTGTCTCTCAGGACCTaGAAATCCAGGAAGCGGTCTTCACGCTTTGGGCGTACAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PIMVMELEFLLSLRT*KSRKRSSRFGRTDG Trigger: TCCATCTGTACGCCCAAAGCGTGAAGACCGCTTCCTGGATTTCCAGGTCCTGAGAGACAGTAAGAATTCCAACTCCATCACCATTATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | GGTTTAGGGTGCGAGCAGCACGATTCAGGAGATCAGGGAACACTTTaGTGCACTCTCGACCGATGTAATACAGGATTCCCTTCTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLGCEQHDSGDQGTL*CTLDRCNTGFPSLV Trigger: TACCAAAGAAGGGAATCCTGTATTACATCGGTCGAGAGTGCACCAAAGTGTTCCCTGATCTCCTGAATCGTGCTGCTCGCACCCTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 90 bp | TATCTTCCATTTCTCTTCGGTTGTACAGGGTGTAGGAGTGGTTCCTaGGATCAAGGACCACTAGCTCTGTGCCATACACGTGGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLPFLFGCTGCRSGS*DQGPLALCHTRGLG Trigger: CCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCAGGAACCACTCCTACACCCTGTACAACCGAAGAGAAATGGAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | TGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTTACACGCAGGGCTTTCATCTaGGAGGTTTCCAGGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSQHKVHQRDSKWSITFTRRAFI*EVSRRA Trigger: AGCCCGCCTGGAAACCTCCAAGATGAAAGCCCTGCG...TGTAAATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | AGGGTACTTGGTCTGATCCTTCAGCAGCAGAAACTGCAACAATTCTaGTACGTTTTGCTCCATGGGATCCTGAGGCTTCAAGGTAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVLGLILQQQKLQQF*YVLLHGILRLQGKS Trigger: GCTCTTACCTTGAAGCCTCAGGATCCCATGGAGCAAAACGTAGCAGAATTGTTGCAGTTTCTGCTGCTGAAGGATCAGACCAAGTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | GACTCCCTCGCATGGTTGCCCATGATAAAGATGAAGCTCAGAACCTaGATTAAGAAATTGTTGCCGGGCCTGTTTGGACTGTCCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: DSLAWLPMIKMKLRT*IKKLLPGLFGLSMI Trigger: GATCATGGACAGTCCAAACAGGCCCGGCAACAATTTCTTAATGCAGGTTCTGAGCTTCATCTTTATCATGGGCAACCATGCGAGGGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 90 bp | AGAAGTCTCTTCACGTTCCCAAAAACAGAAAGCCTTCTTTCACGCTaGACTCCGAATCTCCAGAGCATCTCCCAGATATCAGCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLFTFPKTESLLSR*TPNLQSISQISASL Trigger: GAGAGAAGCTGATATCTGGGAGATGCTCTGGAGATTCGGAGTGCAGCGTGAAAGAAGGCTTTCTGTTTTTGGGAACGTGAAGAGACTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | ACACACACACACCCACTCCTAATACATGAGAACCAGAGCTCTAGGCCTGGCCATACCAATTTCCTTGCCTaGCTCTCTAATCTTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: THTHPLLIHENQSSRPGHTNFLA*LSNLDS Trigger: TGAGTCAAGATTAGAGAGCAAGGCAAGGAAATTGGT...ATGGCCAGGCCTAGAGCTCTGGTTCTCATGTATTAGGAGTGGGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 90 bp | GAACCTGCATTAAGAAATTGTTGCCGGGCCTGTTTGGACTGTCCATaGTCTCTTCTGTATCTTCCATTTCTCTTCGGTTGTACAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EPALRNCCRACLDCP*SLLYLPFLFGCTGC Trigger: ACACCCTGTACAACCGAAGAGAAATGGAAGATACAGAAGAGATCATGGACAGTCCAAACAGGCCCGGCAACAATTTCTTAATGCAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CACAATAGCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTGACTCCCTCGCATGGTaGCCCATGATAAAGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HNSRQKGSQPQLSTLSVVDSLAW*PMIKMK Trigger: CTTCATCTTTATCATGGGCAACCATGCGAGGGAGTC...AACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGCTATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCAAGGTGGGCGGCAGGTaGATGCCCAGTCCATTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAFKEKPISIAICYMFSFKVGGR*MPSPLE Trigger: CTCTAATGGACTGGGCATCAACCTGCCGCCCACCTT...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATTGCATTAAGAAATTGTaGCCGGGCCTGTTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QNAHSTKYTRETVSGQSHCIKKL*PGLFGL Trigger: CAGTCCAAACAGGCCCGGCAACAATTTCTTAATGCA...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CACAATAGCAGACAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTACCTGCATTAAGAAATaGTTGCCGGGCCTGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HNSRQKGSQPQLSTLSVVTCIKK*LPGLFG Trigger: TCCAAACAGGCCCGGCAACAATTTCTTAATGCAGGT...AACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTGTCTGCTATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCCGTACAGATGGATCCTaGGCCTTTTGCAGAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: QAFKEKPISIAICYMFSFRTDGS*AFCRAR Trigger: CCGTGCTCTGCAAAAGGCCAAGGATCCATCTGTACG...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAAATGCTCACAGCACAAAGTACACCAGAGAGACAGTAAGTGGTCAATCACATACTGGACCAATTTCCTaGCCTTGCTCTCTAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QNAHSTKYTRETVSGQSHTGPIS*PCSLIL Trigger: CAAGATTAGAGAGCAAGGCAAGGAAATTGGTCCAGT...ATGTGATTGACCACTTACTGTCTCTCTGGTGTACTTTGTGCTGTGAGCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTAGATCAGGGAACACTTaGGTGCACTCTCGACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFRSGNT*VHSRPM Trigger: CATCGGTCGAGAGTGCACCAAAGTGTTCCCTGATCT...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 90 bp | TCAATGAATTCCCTCATATCAGATTCCTTGATAGGGTACTTGGTCTaGTCCTTCAGCAGCAGAAACTGCAACAATTCTGCTACGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMNSLISDSLIGYLV*SFSSRNCNNSATFC Trigger: GCAAAACGTAGCAGAATTGTTGCAGTTTCTGCTGCTGAAGGATCAGACCAAGTACCCTATCAAGGAATCTGATATGAGGGAATTCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCCAATTCTGCTACGTTTaGCTCCATGGGATCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAFKEKPISIAICYMFSFQFCYV*LHGILR Trigger: CCTCAGGATCCCATGGAGCAAAACGTAGCAGAATTG...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCCCATCTTTGGCCCATTaGGGACGTCTTCTAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAFKEKPISIAICYMFSFPSLAH*GRLLTL Trigger: AAGGGTTAGAAGACGTCCCAAATGGGCCAAAGATGG...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAAAGGGAAGCCAGCCACAACTTAGTACTTTGTCAGTTGTTCTATATTTGTTTTTCAGAATTTTCATCTaGGTGGTTTCTGCGCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKGSQPQLSTLSVVLYLFFRIFI*VVSARD Trigger: ATCCCGCGCAGAAACCACCAAGATGAAAATTCTGAA...AAACAAATATAGAACAACTGACAAAGTACTAAGTTGTGGCTGGCTTCCCTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCCCATACAAAATCATATaGCACCGGATCACTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAFKEKPISIAICYMFSFPYKII*HRITVR Trigger: CCTGACAGTGATCCGGTGCAATATGATTTTGTATGG...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTTTCAAGGAAAAGCCTATATCTATAGCTATCTGCTATATGTTCTCTTTCAATGGGGAGAATATTTaGAGCCAGAAGCATCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAFKEKPISIAICYMFSFNGENI*SQKHLA Trigger: AGCTAGATGCTTCTGGCTCAAAATATTCTCCCCATT...GAAAGAGAACATATAGCAGATAGCTATAGATATAGGCTTTTCCTTGAAAGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | AAACTGCAGGAGGCCGGGAGGCGCCCCGACCCTTCCTaGAGGTGGGCATCTCGGAGGTGTTCGGCCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLQEAGRRPDPS*RWASRRCSAPG Trigger: CCCAGGGGCCGAACACCTCCGAGATGCCCACCTCCAGGAAGGGTCGGGGCGCCTCCCGGCCTCCTGCAGTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | CCAGAAGCGCTAGGGCCCTCGGCAGCTAGGGACATCTaGGAGGTGCTCGACCCCTCCCCCAGGCAGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PEALGPSAARDI*EVLDPSPRQCS Trigger: GCTGCACTGCCTGGGGGAGGGGTCGAGCACCTCGCAGATGTCCCTAGCTGCCGAGGGCCCTAGCGCTTCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | ATGGAGGTGCCAGGGCCCTCAGAGGCGCGGAGGCCCTaGAGGATCTTAGGATCGTTGCGATCCCGAGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: MEVPGPSEARRP*RILGSLRSRGT Trigger: CGTCCCTCGGGATCGCAACGATCCTAAGATCCTCCAGGGCCTCCGCGCCTCTGAGGGCCCTGGCACCTCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | ATCTCGGAGGTGTTCGGCCCCTGGGAAATGATGAACTaGCTAGGGGCGCTTGAGCCCTCTGAGGCGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISEVFGPWEMMN*LGALEPSEAVG Trigger: GCCCACCGCCTCAGAGGGCTCAAGCGCCCCTAGGCAGTTCATCATTTCCCAGGGGCCGAACACCTCCGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | CACAGGATCCCTCCGCAGCGCATGGCGCCAGCGAGCTaGAGAAGCCCTCAGCAGAAATGGATGACAGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: HRIPPQRMAPAS*RSPQQKWMTGT Trigger: CGTCCCTGTCATCCATTTCTGCTGAGGGCTTCTGCAGCTCGCTGGCGCCATGCGCTGCGGAGGGATCCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | ATGGCGCCAGCGAGCTGCAGAAGCCCTCAGCAGAAATaGATGACAGGGACGAGCTCAGGCCCTCGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: MAPASCRSPQQK*MTGTSSGPRLR Trigger: CCTCAGCCGAGGGCCTGAGCTCGTCCCTGTCATCCATTTCTGCTGAGGGCTTCTGCAGCTCGCTGGCGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 72 bp | CCCAGGGTGGGCTCCATGTTAGGGCCCCCATCAGAGTaGCGCTGCTCAGAGATGGCCAGCCCTTCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: PRVGSMLGPPSE*RCSEMASPSET Trigger: TGTCTCAGAAGGGCTGGCCATCTCTGAGCAGCGTCACTCTGATGGGGGCCCTAACATGGAGCCCACCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | GAGGATCTTAGGATCGTTGCGATCCCGAGGGACGTCTaGGCCTGGCACAGCAGCAGGGTGACCCTTCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: EDLRIVAIPRDV*AWHSSRVTLPV Trigger: AACGGGAAGGGTCACCCTGCTGCTGTGCCAGGCCCAGACGTCCCTCGGGATCGCAACGATCCTAAGATCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | CTTAGGATCGTTGCGATCCCGAGGGACGTCTGGGCCTaGCACAGCAGCAGGGTGACCCTTCCCGTTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LRIVAIPRDVWA*HSSRVTLPVVS Trigger: AGAAACAACGGGAAGGGTCACCCTGCTGCTGTGCCAGGCCCAGACGTCCCTCGGGATCGCAACGATCCTAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | TGGCCTTTTGCAGAGCACGGGAGGTGCTCTTGTTCCTaGGCTCAGAAGCACAGCAGCTCAGTGCTTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: WPFAEHGRCSCS*AQKHSSSVLPR Trigger: CCGAGGAAGCACTGAGCTGCTGTGCTTCTGAGCGCAGGAACAAGAGCACCTCCCGTGCTCTGCAAAAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | GGGCTCTCACAAGCAGCTGATGGCACCGAGGTGCGCAGTCCCTTTTaGGAGGTGGGCGGCACGTTGACGTTACATCCCTCCATTATGATG | + |
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Preference number: 6 (lower is better) Translates to: GLSQAADGTEVRSPF*EVGGTLTLHPSIMM Trigger: CATCATAATGGAGGGATGTAACGTCAACGTGCCGCCCACCTCCAAAAAGGGACTGCGCACCTCGGTGCCATCAGCTGCTTGTGAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | CTGTGGATTCGGGCCACATATCGCAGGGCTTTCATCTaGGAGGTTTCCAGGCGGGCTCTAGGGCCCCATACA | + |
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Preference number: 6 (lower is better) Translates to: LWIRATYRRAFI*EVSRRALGPHT Trigger: TGTATGGGGCCCTAGAGCCCGCCTGGAAACCTCCAAGATGAAAGCCCTGCGATATGTGGCCCGAATCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | GAAGCGGTCTTCACGCTTTGGGCGTACAGATGGATCCTTGGCCTTTaGCAGAGCACGGGAGGTGCTCTTGTTCCTGCGCTCAGAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: EAVFTLWAYRWILGL*QSTGGALVPALRST Trigger: TGTGCTTCTGAGCGCAGGAACAAGAGCACCTCCCGTGCTCTGCAAAAGGCCAAGGATCCATCTGTACGCCCAAAGCGTGAAGACCGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | CAGTCCATTAGAGTCAGTGGGCGGCACCGAAGTGCTTaGGTCCTCACTAACGGAGTAGGGCTCGTTGATACC | + |
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Preference number: 6 (lower is better) Translates to: QSIRVSGRHRSA*VLTNGVGLVDT Trigger: GGTATCAACGAGCCCTACTCCGTTAGTGAGGACCCAAGCACTTCGGTGCCGCCCACTGACTCTAATGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | TTCCATTGCCTCCCTGTACTGCTCCGGCCAGTCTTCTaGCTCCTTTCTGTGGATTCGGGCCACATATCGCAG | + |
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Preference number: 6 (lower is better) Translates to: FHCLPVLLRPVF*LLSVDSGHISQ Trigger: CTGCGATATGTGGCCCGAATCCACAGAAAGGAGCCAGAAGACTGGCCGGAGCAGTACAGGGAGGCAATGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | AGGAGTGGTTCCTGGGATCAAGGACCACTAGCTCTGTaGCATACACGTGGTTTAGGGTGCGAGCAGCACGAT | + |
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Preference number: 6 (lower is better) Translates to: RSGSWDQGPLAL*HTRGLGCEQHD Trigger: ATCGTGCTGCTCGCACCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCAGGAACCACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | GTAAGAGCAACGCGGGAGGTGCCCAGGCCCATAATGGTGATGGAGTaGGAATTCTTACTGTCTCTCAGGACCTGGAAATCCAGGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: VRATREVPRPIMVME*EFLLSLRTWKSRKR Trigger: CCGCTTCCTGGATTTCCAGGTCCTGAGAGACAGTAAGAATTCCAACTCCATCACCATTATGGGCCTGGGCACCTCCCGCGTTGCTCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 72 bp | TGCAACAATTCTGCTACGTTTTGCTCCATGGGATCCTaGGGCTTCAAGGTAAGAGCAACGCGGGAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: CNNSATFCSMGS*GFKVRATREVP Trigger: GGGCACCTCCCGCGTTGCTCTTACCTTGAAGCCTCAGGATCCCATGGAGCAAAACGTAGCAGAATTGTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 72 bp | ACCGAAAAATGCACTCCAGGTGGACTGCTGCTCGTCTaGGGATCTCCGGGAACTGGTGGCGATAGTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: TEKCTPGGLLLV*GSPGTGGDSLC Trigger: ACAAAGACTATCGCCACCAGTTCCCGGAGATCCTCAGACGAGCAGCAGTCCACCTGGAGTGCATTTTTCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | GGACCACTAGCTCTGTGCCATACACGTGGTTTAGGGTaGGAGCAGCACGATTCAGGAGATCAGGGAACACTT | + |
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Preference number: 6 (lower is better) Translates to: GPLALCHTRGLG*EQHDSGDQGTL Trigger: AAGTGTTCCCTGATCTCCTGAATCGTGCTGCTCGCACCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | TCCAGGCGGGCTCTAGGGCCCCATACAAAATCATATTaGACCGGATCACTGTCAGGAACCCGCAAACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SRRALGPHTKSY*TGSLSGTRKLS Trigger: AGACAGTTTGCGGGTTCCTGACAGTGATCCGGTGCAATATGATTTTGTATGGGGCCCTAGAGCCCGCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | CTGGGATCAAGGACCACTAGCTCTGTGCCATACACGTaGTTTAGGGTGCGAGCAGCACGATTCAGGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: LGSRTTSSVPYT*FRVRAARFRRS Trigger: TGATCTCCTGAATCGTGCTGCTCGCACCCTAAACCACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | CCCCTTAGAAAGGCCCAGACTGCAGACTCCCTCGCATaGTTGCCCATGATAAAGATGAAGCTCAGAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLRKAQTADSLA*LPMIKMKLRTC Trigger: GCAGGTTCTGAGCTTCATCTTTATCATGGGCAACCATGCGAGGGAGTCTGCAGTCTGGGCCTTTCTAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | TTCCAGGCGGGCTCTAGGGCCCCATACAAAATCATATaGCACCGGATCACTGTCAGGAACCCGCAAACTGTC | + |
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Preference number: 6 (lower is better) Translates to: FQAGSRAPYKII*HRITVRNPQTV Trigger: GACAGTTTGCGGGTTCCTGACAGTGATCCGGTGCAATATGATTTTGTATGGGGCCCTAGAGCCCGCCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | GGCTCCTTTCTGTGGATTCGGGCCACATATCGCAGGGCTTTCATCTaGGAGGTTTCCAGGCGGGCTCTAGGGCCCCATACAAAATCATAT | + |
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Preference number: 6 (lower is better) Translates to: GSFLWIRATYRRAFI*EVSRRALGPHTKSY Trigger: ATATGATTTTGTATGGGGCCCTAGAGCCCGCCTGGAAACCTCCAAGATGAAAGCCCTGCGATATGTGGCCCGAATCCACAGAAAGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | GGTCTGATCCTTCAGCAGCAGAAACTGCAACAATTCTGCTACGTTTaGCTCCATGGGATCCTGAGGCTTCAAGGTAAGAGCAACGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLILQQQKLQQFCYV*LHGILRLQGKSNAG Trigger: TCCCGCGTTGCTCTTACCTTGAAGCCTCAGGATCCCATGGAGCAAAACGTAGCAGAATTGTTGCAGTTTCTGCTGCTGAAGGATCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | GTGATGGAGTTGGAATTCTTACTGTCTCTCAGGACCTaGAAATCCAGGAAGCGGTCTTCACGCTTTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: VMELEFLLSLRT*KSRKRSSRFGR Trigger: ACGCCCAAAGCGTGAAGACCGCTTCCTGGATTTCCAGGTCCTGAGAGACAGTAAGAATTCCAACTCCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | TGCGAGCAGCACGATTCAGGAGATCAGGGAACACTTTaGTGCACTCTCGACCGATGTAATACAGGATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: CEQHDSGDQGTL*CTLDRCNTGFP Trigger: AGGGAATCCTGTATTACATCGGTCGAGAGTGCACCAAAGTGTTCCCTGATCTCCTGAATCGTGCTGCTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | TTTCTCTTCGGTTGTACAGGGTGTAGGAGTGGTTCCTaGGATCAAGGACCACTAGCTCTGTGCCATACACGT | + |
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Preference number: 6 (lower is better) Translates to: FLFGCTGCRSGS*DQGPLALCHTR Trigger: ACGTGTATGGCACAGAGCTAGTGGTCCTTGATCCCAGGAACCACTCCTACACCCTGTACAACCGAAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | CCAGAATCATCATCAAGAGGCCCATCTTTGGCCCATTaGGGACGTCTTCTAACCCTTCAAAGGGCACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PESSSRGPSLAH*GRLLTLQRALV Trigger: GACCAGTGCCCTTTGAAGGGTTAGAAGACGTCCCAAATGGGCCAAAGATGGGCCTCTTGATGATGATTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | CCCAAGCCCCTTAGAAAGGCCCAGACTGCAGACTCCCTCGCATGGTaGCCCATGATAAAGATGAAGCTCAGAACCTGCATTAAGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: PKPLRKAQTADSLAW*PMIKMKLRTCIKKL Trigger: CAATTTCTTAATGCAGGTTCTGAGCTTCATCTTTATCATGGGCAACCATGCGAGGGAGTCTGCAGTCTGGGCCTTTCTAAGGGGCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | GAGCAGCACGATTCAGGAGATCAGGGAACACTTTGGTaGACTCTCGACCGATGTAATACAGGATTCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: EQHDSGDQGTLW*TLDRCNTGFPS Trigger: AGAAGGGAATCCTGTATTACATCGGTCGAGAGTGCACCAAAGTGTTCCCTGATCTCCTGAATCGTGCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | CTTAGAAAGGCCCAGACTGCAGACTCCCTCGCATGGTaGCCCATGATAAAGATGAAGCTCAGAACCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: LRKAQTADSLAW*PMIKMKLRTCI Trigger: AATGCAGGTTCTGAGCTTCATCTTTATCATGGGCAACCATGCGAGGGAGTCTGCAGTCTGGGCCTTTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 90 bp | ATATGTGTCCCAGAATCATCATCAAGAGGCCCATCTTTGGCCCATTaGGGACGTCTTCTAACCCTTCAAAGGGCACTGGTCCCAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ICVPESSSRGPSLAH*GRLLTLQRALVPVC Trigger: ACAAACTGGGACCAGTGCCCTTTGAAGGGTTAGAAGACGTCCCAAATGGGCCAAAGATGGGCCTCTTGATGATGATTCTGGGACACATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | GGTCTGATCCTTCAGCAGCAGAAACTGCAACAATTCTaGTACGTTTTGCTCCATGGGATCCTGAGGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GLILQQQKLQQF*YVLLHGILRLQ Trigger: TTGAAGCCTCAGGATCCCATGGAGCAAAACGTAGCAGAATTGTTGCAGTTTCTGCTGCTGAAGGATCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | GTCAGCGTCTTCTTCCAGAGCTTCGTTGTACAGGGCTaGCCAGTCCATAGGATCTTTGTTATAGATCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: VSVFFQSFVVQG*PVHRIFVIDLS Trigger: GCTAAGATCTATAACAAAGATCCTATGGACTGGCCAGCCCTGTACAACGAAGCTCTGGAAGAAGACGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | TTCACGTTCCCAAAAACAGAAAGCCTTCTTTCACGCTaGACTCCGAATCTCCAGAGCATCTCCCAGATATCA | + |
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Preference number: 6 (lower is better) Translates to: FTFPKTESLLSR*TPNLQSISQIS Trigger: TGATATCTGGGAGATGCTCTGGAGATTCGGAGTGCAGCGTGAAAGAAGGCTTTCTGTTTTTGGGAACGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS GCA 72 bp | GCATGGTTGCCCATGATAAAGATGAAGCTCAGAACCTaGATTAAGAAATTGTTGCCGGGCCTGTTTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: AWLPMIKMKLRT*IKKLLPGLFGL Trigger: CAGTCCAAACAGGCCCGGCAACAATTTCTTAATGCAGGTTCTGAGCTTCATCTTTATCATGGGCAACCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | CTCCAGAGCATCTCCCAGATATCAGCTTCTCTCGCTTaGTTGCCATTTAGTAATATGTGTCCCAGAATCATC | + |
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Preference number: 6 (lower is better) Translates to: LQSISQISASLA*LPFSNMCPRII Trigger: GATGATTCTGGGACACATATTACTAAATGGCAACCAAGCGAGAGAAGCTGATATCTGGGAGATGCTCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | TCCATCAGCAGAAATAACTGGACCAATTTCCTTGCCTaGCTCTCTAATCTTGACTCAGGCCAAGAATGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SISRNNWTNFLA*LSNLDSGQEWG Trigger: TCCCCATTCTTGGCCTGAGTCAAGATTAGAGAGCAAGGCAAGGAAATTGGTCCAGTTATTTCTGCTGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS TCA 72 bp | TCCCTCATATCAGATTCCTTGATAGGGTACTTGGTCTaGTCCTTCAGCAGCAGAAACTGCAACAATTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SLISDSLIGYLV*SFSSRNCNNSA Trigger: AGCAGAATTGTTGCAGTTTCTGCTGCTGAAGGATCAGACCAAGTACCCTATCAAGGAATCTGATATGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CCA 72 bp | CTCTGGAGCAACTTCTGCAAAAAGGGGCCTCCTAAATaGACGAGCAACTCTGAAGTTATTAACAACAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LWSNFCKKGPPK*TSNSEVINNNS Trigger: AGAGTTGTTGTTAATAACTTCAGAGTTGCTCGTCCATTTAGGAGGCCCCTTTTTGCAGAAGTTGCTCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | ATAAAGATGAAGCTCAGAACCTGCATTAAGAAATTGTaGCCGGGCCTGTTTGGACTGTCCATGATCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IKMKLRTCIKKL*PGLFGLSMISS Trigger: AGAAGAGATCATGGACAGTCCAAACAGGCCCGGCAACAATTTCTTAATGCAGGTTCTGAGCTTCATCTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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| CDS CAA 72 bp | ATGATAAAGATGAAGCTCAGAACCTGCATTAAGAAATaGTTGCCGGGCCTGTTTGGACTGTCCATGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: MIKMKLRTCIKK*LPGLFGLSMIS Trigger: AGAGATCATGGACAGTCCAAACAGGCCCGGCAACAATTTCTTAATGCAGGTTCTGAGCTTCATCTTTATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033578.7 |
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