Pregenerated sensors for MAGEB5B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000064129

Ensembl transcript IDs: ENSMUST00000078469.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	GCAGGCGATGATACACAGGAAAGCCATCCAGCGTCACTACTTGTTTaGGAAGCTGGTGGCTTCTCAAGAGTCTCCCCAGGCACAGAAGGG	+
Preference number: 6 (lower is better) Translates to: AGDDTQESHPASLLV*EAGGFSRVSPGTEG Trigger: CCCTTCTGTGCCTGGGGAGACTCTTGAGAAGCCACCAGCTTCCAAAACAAGTAGTGACGCTGGATGGCTTTCCTGTGTATCATCGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CCA 72 bp	GGAAAGCCATCCAGCGTCACTACTTGTTTTGGAAGCTaGTGGCTTCTCAAGAGTCTCCCCAGGCACAGAAGG	+
Preference number: 6 (lower is better) Translates to: GKPSSVTTCFGS*WLLKSLPRHRR Trigger: CCTTCTGTGCCTGGGGAGACTCTTGAGAAGCCACCAGCTTCCAAAACAAGTAGTGACGCTGGATGGCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CCA 72 bp	ATACACAGGAAAGCCATCCAGCGTCACTACTTGTTTTaGAAGCTGGTGGCTTCTCAAGAGTCTCCCCAGGCA	+
Preference number: 6 (lower is better) Translates to: IHRKAIQRHYLF*KLVASQESPQA Trigger: TGCCTGGGGAGACTCTTGAGAAGCCACCAGCTTCCAAAACAAGTAGTGACGCTGGATGGCTTTCCTGTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CCA 72 bp	TACCATCATCAAATTCTAATTCATCTCCACAAACAGTaGCAGGCGATGATACACAGGAAAGCCATCCAGCGT	+
Preference number: 6 (lower is better) Translates to: YHHQILIHLHKQ*QAMIHRKAIQR Trigger: ACGCTGGATGGCTTTCCTGTGTATCATCGCCTGCCACTGTTTGTGGAGATGAATTAGAATTTGATGATGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CAA 90 bp	ATGGCCTTTCTCCTGAGACTCATCTTTTTGAGGATGGACTTTCTCTaGGTTGTGTTTCTTATTCTTCAAGCGGTTGCGGTGGTGCTTATT	+
Preference number: 6 (lower is better) Translates to: MAFLLRLIFLRMDFL*VVFLILQAVAVVLI Trigger: AATAAGCACCACCGCAACCGCTTGAAGAATAAGAAACACAACCAAGAGAAAGTCCATCCTCAAAAAGATGAGTCTCAGGAGAAAGGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CAA 72 bp	CTGGACATGTTGATGGCTATGTCCTGGACAATGTTTTaGTGCCAGGATAGGATACCATTTTCTTATCTTGGT	+
Preference number: 6 (lower is better) Translates to: LDMLMAMSWTMF*CQDRIPFSYLG Trigger: ACCAAGATAAGAAAATGGTATCCTATCCTGGCACAAAAACATTGTCCAGGACATAGCCATCAACATGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CCA 72 bp	ACATACATATCTAGGCAATGTTTGCATGGATTTTCTTaGCAGGTTCGATACTCTGAGTATAATGAGTTCCCC	+
Preference number: 6 (lower is better) Translates to: TYISRQCLHGFS*QVRYSEYNEFP Trigger: GGGGAACTCATTATACTCAGAGTATCGAACCTGCCAAGAAAATCCATGCAAACATTGCCTAGATATGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078469.3
CDS CCA 72 bp	TTTCATAACCTTCTGGACATGTTGATGGCTATGTCCTaGACAATGTTTTTGTGCCAGGATAGGATACCATTT	+
Preference number: 6 (lower is better) Translates to: FHNLLDMLMAMS*TMFLCQDRIPF Trigger: AAATGGTATCCTATCCTGGCACAAAAACATTGTCCAGGACATAGCCATCAACATGTCCAGAAGGTTATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078469.3

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