Pregenerated sensors for MAGEB5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061392

Ensembl transcript IDs: ENSMUST00000082048.3

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GTACATACTGCTCCACAAGATTCACATACATATCTAGGCAATGTTTaGATGGATTTTCTTGGCAGGTTCGATACTCTGAGTATAATGAGT	+
Preference number: 5 (lower is better) Translates to: VHTAPQDSHTYLGNV*MDFLGRFDTLSIMS Trigger: ACTCATTATACTCAGAGTATCGAACCTGCCAAGAAAATCCATGCAAACATTGCCTAGATATGTATGTGAATCTTGTGGAGCAGTATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS CAA 72 bp	GATACACAGGAAAGCCATCCAGCGTCACTACTTGTTTaGGAAGCTGGTGGCTTCTCAAGAGTCTCCCCAGGC	+
Preference number: 6 (lower is better) Translates to: DTQESHPASLLV*EAGGFSRVSPG Trigger: GCCTGGGGAGACTCTTGAGAAGCCACCAGCTTCCAAAACAAGTAGTGACGCTGGATGGCTTTCCTGTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS CAA 72 bp	GCGATGATACACAGGAAAGCCATCCAGCGTCACTACTaGTTTTGGAAGCTGGTGGCTTCTCAAGAGTCTCCC	+
Preference number: 6 (lower is better) Translates to: AMIHRKAIQRHY*FWKLVASQESP Trigger: GGGAGACTCTTGAGAAGCCACCAGCTTCCAAAACAAGTAGTGACGCTGGATGGCTTTCCTGTGTATCATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS CAA 72 bp	CTCCTGAGACTCATCTTTTTGAGGATGGACTTTCTCTaGGTTGTGTTTCTTATTCTTCAAGCGGTTGCGGTG	+
Preference number: 6 (lower is better) Translates to: LLRLIFLRMDFL*VVFLILQAVAV Trigger: CACCGCAACCGCTTGAAGAATAAGAAACACAACCAAGAGAAAGTCCATCCTCAAAAAGATGAGTCTCAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS CAA 72 bp	CTGGACATGTTGATGGCTATGTCCTGGACAATGTTTTaGTGCCAGGATGGGATACCATTTTCTTATCTTGGT	+
Preference number: 6 (lower is better) Translates to: LDMLMAMSWTMF*CQDGIPFSYLG Trigger: ACCAAGATAAGAAAATGGTATCCCATCCTGGCACAAAAACATTGTCCAGGACATAGCCATCAACATGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS GCA 72 bp	CACAGAAGGGGAAGAGCAAGAAGACTTTTCTTCTACTaGTGCATTATCCCTTGCTTCCTTATGATCTTGAAA	+
Preference number: 6 (lower is better) Translates to: HRRGRARRLFFY*CIIPCFLMILK Trigger: TTTCAAGATCATAAGGAAGCAAGGGATAATGCAGCAGTAGAAGAAAAGTCTTCTTGCTCTTCCCCTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS GCA 72 bp	GCTCCACAAGATTCACATACATATCTAGGCAATGTTTaGATGGATTTTCTTGGCAGGTTCGATACTCTGAGT	+
Preference number: 6 (lower is better) Translates to: APQDSHTYLGNV*MDFLGRFDTLS Trigger: ACTCAGAGTATCGAACCTGCCAAGAAAATCCATGCAAACATTGCCTAGATATGTATGTGAATCTTGTGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS GCA 72 bp	GACATGTTGATGGCTATGTCCTGGACAATGTTTTTGTaGCAGGATGGGATACCATTTTCTTATCTTGGTCTT	+
Preference number: 6 (lower is better) Translates to: DMLMAMSWTMFL*QDGIPFSYLGL Trigger: AAGACCAAGATAAGAAAATGGTATCCCATCCTGGCACAAAAACATTGTCCAGGACATAGCCATCAACATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS CAA 72 bp	TCTTTTATGATGGCCTTTCTCCTGAGACTCATCTTTTaGAGGATGGACTTTCTCTTGGTTGTGTTTCTTATT	+
Preference number: 6 (lower is better) Translates to: SFMMAFLLRLIF*RMDFLLVVFLI Trigger: AATAAGAAACACAACCAAGAGAAAGTCCATCCTCAAAAAGATGAGTCTCAGGAGAAAGGCCATCATAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082048.3
CDS CAA 72 bp	CTCTCTATAAATAAAATGCTTCCTCCCTGGGTACACTaGCATATAATTCAGGAATTTCCAAATGTCTTCCTC	+
Preference number: 6 (lower is better) Translates to: LSINKMLPPWVH*HIIQEFPNVFL Trigger: GAGGAAGACATTTGGAAATTCCTGAATTATATGCAAGTGTACCCAGGGAGGAAGCATTTTATTTATAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082048.3