Pregenerated sensors for MAGEB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035427Ensembl transcript IDs: ENSMUST00000096378.3, ENSMUST00000113969.10
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCTATACCTGTGAGTCCTaGACCTATATAAGGATTCTA | + |
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Preference number: 2 (lower is better) Translates to: TCFKEMLLSLQSNGCLLIYTCES*TYIRIL Trigger: TAGAATCCTTATATAGGTTCAGGACTCACAGGTATA...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| 3UTR GCA 72 bp | AAGAAACAAATTACTCTCTCACATGTTTCAAAGAAATaGTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: KKQITLSHVSKK*SFRYKVMGACS Trigger: TGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGTGAGAGAGTAATTTGTTTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCGCATCCTGGAGCTCCTaGGCCTCATCCTGGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSASWSS*ASSWTR Trigger: CCTGGTCCAGGATGAGGCCCAGGAGCTCCAGGATGC...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCTCTCCTGCCTTGGCTTaGGCATCCTGGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLISPALA*ASWSSW Trigger: CCAGGAGCTCCAGGATGCTCAAGCCAAGGCAGGAGA...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCGCTCAGAGGCTTTCTTaGGGATCTCAGGCAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSAQRLS*GSQATA Trigger: AGCAGTTGCCTGAGATCCTCAAGAAAGCCTCTGAGC...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCCTCCTCATAATGGGTTaGGAAGGCCTGAGGAACGGT | + |
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Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSLLIMG*EGLRNG Trigger: ACCGTTCCTCAGGCCTTCCCAACCCATTATGAGGAG...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCTGGGTTGGGAAGGCCTaGGGAACGGTCTCATTGACC | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLIWVGKA*GTVSLT Trigger: GGTCAATGAGACCGTTCCTCAGGCCTTCCCAACCCA...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATGCATCCTGGAGCTCCTaGGCCTCATCCTGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYASWSS*ASSWTR Trigger: CCTGGTCCAGGATGAGGCCCAGGAGCTCCAGGATGC...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATTCTCCTGCCTTGGCTTaGGCATCCTGGAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYSPALA*ASWSSW Trigger: CCAGGAGCTCCAGGATGCTCAAGCCAAGGCAGGAGA...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCTTGCAGAGCAGGTACTaGATCAGCATTCCTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSLQSRY*ISIPVF Trigger: GAAGACAGGAATGCTGATGCAGTACCTGCTCTGCAA...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATTCCTGGGCCTCATCCTaGACCAGGCGACGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYSWASS*TRRRFS Trigger: TGAGAAGCGTCGCCTGGTCCAGGATGAGGCCCAGGA...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCGCTCAGAGGCTTTCTTaGGGATCTCAGGCAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLIAQRLS*GSQATA Trigger: AGCAGTTGCCTGAGATCCTCAAGAAAGCCTCTGAGC...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATTGGGTTGGGAAGGCCTaGGGAACGGTCTCATTGACC | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYWVGKA*GTVSLT Trigger: GGTCAATGAGACCGTTCCTCAGGCCTTCCCAACCCA...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATGCATCTCCAGAATCCTaGTTAGAGCAGGAGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYASPES*LEQEGD Trigger: GTCCCCCTCCTGCTCTAATCAGGATTCTGGAGATGC...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCTTGGCCTTGTATTTGTaGGAGGAGCCAAGTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLILALYL*EEPSVT Trigger: GGTCACACTTGGCTCCTCTCACAAATACAAGGCCAA...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCTGTGACTTTAGCCTCTaGCTTATCTTTGGCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSCDFSL*LIFGTS Trigger: ACTAGTGCCAAAGATAAGGCAGAGGCTAAAGTCACA...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCACTTGGCATTATCTTTaGAAGAGGGGTCAACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSTWHYL*KRGQQV Trigger: CACTTGTTGACCCCTCTTGCAAAGATAATGCCAAGT...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCTTGCAGAGCAGGTACTaGATCAGCATTCCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLILQSRY*ISIPVF Trigger: GAAGACAGGAATGCTGATGCAGTACCTGCTCTGCAA...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCGGTACTTTCCTCCCTTaGACCTCTGGTACTTTTACG | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLIGTFLP*TSGTFT Trigger: CGTAAAAGTACCAGAGGTCCAAGGGAGGAAAGTACC...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTCCTCATAATGGGTTaGGAAGGCCTGAGGAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYLLIMG*EGLRNG Trigger: ACCGTTCCTCAGGCCTTCCCAACCCATTATGAGGAG...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCACTTTAGACTCAGCCTaGTCTTTGCAAGAGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLITLDSA*SLQEES Trigger: TGACTCCTCTTGCAAAGATCAGGCTGAGTCTAAAGT...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCACTTTAGACTCAGCCTaGTCTTTGCAAGAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLITLDSA*SLQEST Trigger: TGTGGACTCTTGCAAAGATCAGGCTGAGTCTAAAGT...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATTTGGCCTTGTATTTGTaGGAGGAGCCAAGTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYLALYL*EEPSVT Trigger: GGTCACACTTGGCTCCTCTCACAAATACAAGGCCAA...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCCATTTCTCCCTTAGATaGTGGCTGTTTCATTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSHFSLR*WLFHFV Trigger: TACAAAATGAAACAGCCAGCATCTAAGGGAGAAATG...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCAGGATCTCAGGCAACTaGTCCTTGAACCTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLRISGN*SLNLLL Trigger: CAACAGAAGGTTCAAGGAGCAGTTGCCTGAGATCCT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCACTCAGCCTGATCTTTaGAAGAGGAGTCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLTQPDL*KRSQPV Trigger: CACTGGTTGACTCCTCTTGCAAAGATCAGGCTGAGT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCACTTGGCCTTATCTTTaGAAGAGGGGTCAACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLITWPYL*KRGQQV Trigger: CACTTGTTGACCCCTCTTGCAAAGATAAGGCCAAGT...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCTTCTCCCTTAGATGCTaGCTGTTTCATTTTGTACTT | + |
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Preference number: 4 (lower is better) Translates to: EKPCSKPKDISASHLCRSFSLRC*LFHFVL Trigger: AAGTACAAAATGAAACAGCCAGCATCTAAGGGAGAA...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATGGGGGATCACTGTTaGCCTCCTTTTGGTATACCA | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLMGDHC*PPFGIP Trigger: TGGTATACCAAAAGGAGGCCAACAGTGATCCCCCAT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCACTTTAGACTCAGCCTaGTCTTTGCAAGAGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLTLDSA*SLQEES Trigger: TGACTCCTCTTGCAAAGATCAGGCTGAGTCTAAAGT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR TCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCACTTTAGACTCAGCCTaGTCTTTGCAAGAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLTLDSA*SLQEST Trigger: TGTGGACTCTTGCAAAGATCAGGCTGAGTCTAAAGT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCTGTGACTTTAGCCTCTaGCTTATCTTTGGCACTAGT | + |
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Preference number: 4 (lower is better) Translates to: TCFKEMLLSLQSNGCLLICDFSL*LIFGTS Trigger: ACTAGTGCCAAAGATAAGGCAGAGGCTAAAGTCACA...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCACTCAGCCTGATATTTaGAAGAGGAGTCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLTQPDI*KRSQPV Trigger: CACTGGTTGACTCCTCTTGCAAATATCAGGCTGAGT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCACTTGGCCTTATCTTTaGAAGAGGGGTCAACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLTWPYL*KRGQQV Trigger: CACTTGTTGACCCCTCTTGCAAAGATAAGGCCAAGT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCCTGTTGGCCTCCTTTTaGTATACCAGGTACTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLLLASF*YTRYFS Trigger: GGAAAAGTACCTGGTATACCAAAAGGAGGCCAACAG...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATATGGGGGATCACTGTTaGCCTCCTTTTGGTATACCA | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYMGDHC*PPFGIP Trigger: TGGTATACCAAAAGGAGGCCAACAGTGATCCCCCAT...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATACTCAGCCTGATATTTaGAAGAGGAGTCAACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYTQPDI*KRSQPV Trigger: CACTGGTTGACTCCTCTTGCAAATATCAGGCTGAGT...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGTTGGCCTCCTTTTaGTATACCAGGTACTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYLLASF*YTRYFS Trigger: GGAAAAGTACCTGGTATACCAAAAGGAGGCCAACAG...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATACTTGGCATTATCTTTaGAAGAGGGGTCAACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYTWHYL*KRGQQV Trigger: CACTTGTTGACCCCTCTTGCAAAGATAATGCCAAGT...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATGTTTCATTTTGTACTTaGAGAGCAGGTACTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYVSFCT*RAGTAS Trigger: TGATGCAGTACCTGCTCTGCAAGTACAAAATGAAAC...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR GCA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCCATTTCTCCCTTAGATaGTGGCTGTTTCATTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLHFSLR*WLFHFV Trigger: TACAAAATGAAACAGCCAGCATCTAAGGGAGAAATG...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS TCA 90 bp | GGGAAGCCAGCAGTAGAGGTGCTTGCAACAGCATCTCCAGAATCCTaGTTAGAGCAGGAGGGGGACTTTCCTTTCTCTCCTGCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: GKPAVEVLATASPES*LEQEGDFPFSPALA Trigger: AGCCAAGGCAGGAGAGAAAGGAAAGTCCCCCTCCTGCTCTAATCAGGATTCTGGAGATGCTGTTGCAAGCACCTCTACTGCTGGCTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS GCA 90 bp | ACGAGATCTTCTGCAGGCACCACCTTTCCTAGCAGTGGTGGTGGGTaGCTCACCTTGAGATTTAGACTTTTGAGGGAAGCCAGCAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TRSSAGTTFPSSGGG*LTLRFRLLREASSR Trigger: TCTACTGCTGGCTTCCCTCAAAAGTCTAAATCTCAAGGTGAGGCACCCACCACCACTGCTAGGAAAGGTGGTGCCTGCAGAAGATCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS GCA 90 bp | AGCCTGATATTTGCAAGAGGAGTCAACCAGTGTGACTTTAGCCTCTaGCTTATCTTTGGCACTAGTGCCAGGACTGCCTACAGCTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: SLIFARGVNQCDFSL*LIFGTSARTAYSFG Trigger: GCCGAAGCTGTAGGCAGTCCTGGCACTAGTGCCAAAGATAAGGCAGAGGCTAAAGTCACACTGGTTGACTCCTCTTGCAAATATCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCGCCTACAGCTTCGGCTaGGGCTCTCTCTTCCTGATC | + |
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Preference number: 5 (lower is better) Translates to: EKPCSKPKDISASHLCRSAYSFG*GSLFLI Trigger: GATCAGGAAGAGAGAGCCCAAGCCGAAGCTGTAGGC...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCCGCTCAGAGGCTTTCTaGAGGATCTCAGGCAACTGC | + |
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Preference number: 5 (lower is better) Translates to: EKPCSKPKDISASHLCRSRSEAF*RISGNC Trigger: GCAGTTGCCTGAGATCCTCAAGAAAGCCTCTGAGCG...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCGATGGGGGATCACTGTaGGCCTCCTTTTGGTATACC | + |
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Preference number: 5 (lower is better) Translates to: EKPCSKPKDISASHLCRSDGGSL*ASFWYT Trigger: GGTATACCAAAAGGAGGCCAACAGTGATCCCCCATC...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCCCTCCTCATAATGGGTaGGGAAGGCCTGAGGAACGG | + |
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Preference number: 5 (lower is better) Translates to: TCFKEMLLSLQSNGCLLIPPHNG*GRPEER Trigger: CCGTTCCTCAGGCCTTCCCAACCCATTATGAGGAGG...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCGCCTACAGCTTCGGCTaGGGCTCTCTCTTCCTGATC | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLAYSFG*GSLFLI Trigger: GATCAGGAAGAGAGAGCCCAAGCCGAAGCTGTAGGC...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCCGCTCAGAGGCTTTCTaGAGGATCTCAGGCAACTGC | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLRSEAF*RISGNC Trigger: GCAGTTGCCTGAGATCCTCAAGAAAGCCTCTGAGCG...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCCTCCTCATAATGGGTaGGGAAGGCCTGAGGAACGG | + |
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Preference number: 5 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYPPHNG*GRPEER Trigger: CCGTTCCTCAGGCCTTCCCAACCCATTATGAGGAGG...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCGATGGGGGATCACTGTaGGCCTCCTTTTGGTATACC | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLDGGSL*ASFWYT Trigger: GGTATACCAAAAGGAGGCCAACAGTGATCCCCCATC...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCCTTCTGTTGATCACTTaGAGCATTTCTCCCTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: EKPCSKPKDISASHLCRSLLLIT*SISPLD Trigger: ATCTAAGGGAGAAATGCTCAAAGTGATCAACAGAAG...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | GAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCATCTCTGCAGGAGCTCCTTGAACCTTCTGTaGATCACTTTGAGCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: EKPCSKPKDISASHLCRSSLNLL*ITLSIS Trigger: AGAAATGCTCAAAGTGATCAACAGAAGGTTCAAGGA...GCTCCTGCAGAGATGAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCAGTGTGACCTTAGACTaGGCCTTATCTTTGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TCFKEMLLSLQSNGCLLISVTLD*ALSLQE Trigger: CTCTTGCAAAGATAAGGCCAAGTCTAAGGTCACACT...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACATGTTTCAAAGAAATGCTCCTTTCGTTACAAAGTAATGGGTGCTTGCTCATCGCATTCCTGTCTTCCTaGTTAGAAGATCATTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TCFKEMLLSLQSNGCLLIAFLSS*LEDHSV Trigger: CACAGAATGATCTTCTAACAAGGAAGACAGGAATGC...GATGAGCAAGCACCCATTACTTTGTAACGAAAGGAGCATTTCTTTGAAACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCACTGTTGGCCTCCTTTaGGTATACCAGGTACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLTVGLL*VYQVLF Trigger: GAAAAGTACCTGGTATACCAAAAGGAGGCCAACAGT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCAGTGTGACCTTAGACTaGGCCTTATCTTTGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLSVTLD*ALSLQE Trigger: CTCTTGCAAAGATAAGGCCAAGTCTAAGGTCACACT...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCTTGAGATTTAGACTTTaGAGGGAAGCCAGCAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLLRFRL*REASSR Trigger: TCTACTGCTGGCTTCCCTCAAAAGTCTAAATCTCAA...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATCTGCCTCTCGCATTCCTGTCTTCCTaGTTAGAAGATCATTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TTFKVKNPVLNLKTYLPLAFLSS*LEDHSV Trigger: CACAGAATGATCTTCTAACAAGGAAGACAGGAATGC...GAGAGGCAGATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS-3UTR CAA 90 bp | CAACCTCTCACTACTTTTAAGGTGAAAAACCCTGTTCTAAACCTAAAGACATATACTGTTGGCCTCCTTTaGGTATACCAGGTACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: QPLTTFKVKNPVLNLKTYTVGLL*VYQVLF Trigger: GAAAAGTACCTGGTATACCAAAAGGAGGCCAACAGT...ATATGTCTTTAGGTTTAGAACAGGGTTTTTCACCTTAAAAGTAGTGAGAGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CCA 72 bp | GCGGGGGACCCTAGTGCAACTGGTACTTTCCTCCCTTaGACCTCTGGTACTTTTACGAGATCTTCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGDPSATGTFLP*TSGTFTRSSAG Trigger: GCCTGCAGAAGATCTCGTAAAAGTACCAGAGGTCCAAGGGAGGAAAGTACCAGTTGCACTAGGGTCCCCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CAA 72 bp | GAGTCAACCAGTGTGACTTTAGCCTCTGCCTTATCTTaGGCACTAGTGCCAGGACTGCCTACAGCTTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ESTSVTLASALS*ALVPGLPTASA Trigger: AGCCGAAGCTGTAGGCAGTCCTGGCACTAGTGCCAAAGATAAGGCAGAGGCTAAAGTCACACTGGTTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS TCA 72 bp | GCAGTAGAGGTGCTTGCAACAGCATCTCCAGAATCCTaGTTAGAGCAGGAGGGGGACTTTCCTTTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: AVEVLATASPES*LEQEGDFPFSP Trigger: AGGAGAGAAAGGAAAGTCCCCCTCCTGCTCTAATCAGGATTCTGGAGATGCTGTTGCAAGCACCTCTACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CAA 72 bp | CCAGAGGAGTCAACCAGTGGGACTTTAGACTTGGCCTaGTATTTGCGAGAGGAGCCAAGTGTGACCTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: PEESTSGTLDLA*YLREEPSVTLD Trigger: GTCTAAGGTCACACTTGGCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTCCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CAA 72 bp | GAGTCAACCAGTGGGACTTTAGACTTGGCCTTGTATTaGCGAGAGGAGCCAAGTGTGACCTTAGACTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: ESTSGTLDLALY*REEPSVTLDLA Trigger: TGCCAAGTCTAAGGTCACACTTGGCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CAA 72 bp | CAAGAGGAGTCAACCAGTGGGACTTTAGACTTGGCCTaGTATTTGCGAGAGGAGCCAAGTGTGACCTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: QEESTSGTLDLA*YLREEPSVTLD Trigger: GTCTAAGGTCACACTTGGCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTCCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CCA 72 bp | AGACTCAGCCTGATCTTTGCAAGAGGAGTCAACCAGTaGGACTTTAGACTTGGCCTTGTATTTGCGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RLSLIFARGVNQ*DFRLGLVFARG Trigger: TCCTCTCGCAAATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTCCTCTTGCAAAGATCAGGCTGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS TCA 72 bp | TTGCAAGAGTCCACAAGTGTGACTTTAGACTCAGCCTaGTCTTTGCAAGAGGAGTCAACCAGTGGGACTTTA | + |
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Preference number: 6 (lower is better) Translates to: LQESTSVTLDSA*SLQEESTSGTL Trigger: TAAAGTCCCACTGGTTGACTCCTCTTGCAAAGATCAGGCTGAGTCTAAAGTCACACTTGTGGACTCTTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS TCA 72 bp | TCAACCAGTGTGACTTTAGACTTGGCCTTGTATTTGTaGGAGGAGCCAAGTGTGACCTTAGACTTGGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: STSVTLDLALYL*EEPSVTLDLAL Trigger: TAAGGCCAAGTCTAAGGTCACACTTGGCTCCTCTCACAAATACAAGGCCAAGTCTAAAGTCACACTGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS CAA 72 bp | TTGTATTTGCGAGAGGAGCCAAGTGTGACCTTAGACTaGGCATTATCTTTGCAAGAGGGGTCAACAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LYLREEPSVTLD*ALSLQEGSTSV Trigger: CACACTTGTTGACCCCTCTTGCAAAGATAATGCCAAGTCTAAGGTCACACTTGGCTCCTCTCGCAAATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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| CDS TCA 72 bp | CAAGAAGAGTCCACTAGTGTGACTTTAGACTCAGCCTaGTCTTTGCAAGAGGAGTCAACCAGTGTGACTTTA | + |
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Preference number: 6 (lower is better) Translates to: QEESTSVTLDSA*SLQEESTSVTL Trigger: TAAAGTCACACTGGTTGACTCCTCTTGCAAAGATCAGGCTGAGTCTAAAGTCACACTAGTGGACTCTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096378.3 ENSMUST00000113969.10 |
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