Pregenerated sensors for MAGEB18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067649Ensembl transcript IDs: ENSMUST00000088137.3, ENSMUST00000113955.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGTAGATGGAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTaGCTTTCTCTTCCAACAGCTCCAGGCATTAAATGTATAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: GVDGEHTSGHTPKEK*LSLPTAPGIKCIRK Trigger: TTTCCTTATACATTTAATGCCTGGAGCTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTCCATCTACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGAGAAGAATGCAACAATaGTATTCAGTGTGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQRRMQQ*YSVCSF Trigger: GAAGGAGCACACTGAATATCATTGTTGCATTCTTCT...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| 3UTR TCA 72 bp | GGAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTaGCTTTCTCTTCCAACAGCTCCAGGCATTAAATGT | + |
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Preference number: 3 (lower is better) Translates to: GEHTSGHTPKEK*LSLPTAPGIKC Trigger: ACATTTAATGCCTGGAGCTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGCCCAGACGTCAACCTTaGATGTGTAACCTAGAATTA | + |
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Preference number: 3 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQPRRQP*MCNLEL Trigger: TAATTCTAGGTTACACATCAAAGGTTGACGTCTGGG...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTTTTTAGCACGGGCCTaGCGGCGCTTCTCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQFLARA*RRFSRA Trigger: TGCCCGTGAGAAGCGCCGCCAGGCCCGTGCTAAAAA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGCCCTGGCTACAGCCCTaGCTTGGGCTCTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQPWLQP*LGLSLL Trigger: AAGAAGAGAGAGCCCAAGCCAGGGCTGTAGCCAGGG...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGATATGGACTGGCCATTaGAGCAGTGTGAGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQIWTGH*SSVSPG Trigger: GCCAGGGCTCACACTGCTGCAATGGCCAGTCCATAT...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR TCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGCTCTTGGACCCCACGTaGATTCAAAGGATGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQLLDPT*IQRMED Trigger: ATCCTCCATCCTTTGAATTCACGTGGGGTCCAAGAG...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGGGCTTCTTTCTCCTGTaGATTTTTAGCACGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQGFFLL*IFSTGL Trigger: CAGGCCCGTGCTAAAAATGCACAGGAGAAAGAAGCC...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATTTTTAGCACGGGCCTaGCGGCGCTTCTCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLFLARA*RRFSRA Trigger: TGCCCGTGAGAAGCGCCGCCAGGCCCGTGCTAAAAA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGCCCATAGAAAGGACCTaGAGAGGCTTCTTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQPIERT*RGFFLL Trigger: CAGGAGAAAGAAGCCTCTCCAGGTCCTTTCTATGGG...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTTCAGCACAGGCTCTTaGACCCCACGTGAATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQFSTGS*TPREFK Trigger: TTTGAATTCACGTGGGGTCCAAGAGCCTGTGCTGAA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTACCCTGGCTACAGCCCTaGCTTGGGCTCTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLPWLQP*LGLSLL Trigger: AAGAAGAGAGAGCCCAAGCCAGGGCTGTAGCCAGGG...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTGTGAAAAGGTAGACTaGTCTCCCATTGGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQCEKVD*SPIGML Trigger: CAACATGCCAATGGGAGAGCAGTCTACCTTTTCACA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTAATATGGACTGGCCATTaGAGCAGTGTGAGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLIWTGH*SSVSPG Trigger: GCCAGGGCTCACACTGCTGCAATGGCCAGTCCATAT...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGATAGCAGTGCCTGTTTaGATCAACTTCCTTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQIAVPV*INFLQI Trigger: GATCTGAAGGAAGTTGATCCAAACAGGCACTGCTAT...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTGCTTCATACAAGGTTaGGAAGGAATCTGGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQCFIQG*EGIWCS Trigger: ACTACACCAGATTCCTTCCCAACCTTGTATGAAGCA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR TCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGCACAGTTATCATTCATaGATATCACACCCAGCACAA | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQHSYHS*ISHPAQ Trigger: TTGTGCTGGGTGTGATATTCATGAATGATAACTGTG...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTAGGCTTCTTTCTCCTGTaGATTTTTAGCACGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLGFFLL*IFSTGL Trigger: CAGGCCCGTGCTAAAAATGCACAGGAGAAAGAAGCC...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTTCATCTTTCAGAGCTaGTTCATACAAGGTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQFIFQS*FIQGWE Trigger: TTCCCAACCTTGTATGAAGCAGCTCTGAAAGATGAA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTACCCATAGAAAGGACCTaGAGAGGCTTCTTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLPIERT*RGFFLL Trigger: CAGGAGAAAGAAGCCTCTCCAGGTCCTTTCTATGGG...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATTCAGCACAGGCTCTTaGACCCCACGTGAATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLFSTGS*TPREFK Trigger: TTTGAATTCACGTGGGGTCCAAGAGCCTGTGCTGAA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTACTCTTGAATATGGACTaGCCATTGCAGCAGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLLLNMD*PLQQCE Trigger: CTCACACTGCTGCAATGGCCAGTCCATATTCAAGAG...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATGTGAAAAGGTAGACTaGTCTCCCATTGGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLCEKVD*SPIGML Trigger: CAACATGCCAATGGGAGAGCAGTCTACCTTTTCACA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR TCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTACACAGTTATCATTCATaGATATCACACCCAGCACAA | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLHSYHS*ISHPAQ Trigger: TTGTGCTGGGTGTGATATTCATGAATGATAACTGTG...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATCCAAGTACTTTAGCTaGACCATATCTTCAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLSKYFS*TISSVM Trigger: CATCACTGAAGATATGGTGCAGCTAAAGTACTTGGA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR GCA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATTCATCTTTCAGAGCTaGTTCATACAAGGTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LISTQKIFPRRQPLMCNLFIFQS*FIQGWE Trigger: TTCCCAACCTTGTATGAAGCAGCTCTGAAAGATGAA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS CCA 90 bp | ACTGGCAACAGGACTAGCCTGATGTGGACACCCATAGAAAGGACCTaGAGAGGCTTCTTTCTCCTGTGCATTTTTAGCACGGGCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: TGNRTSLMWTPIERT*RGFFLLCIFSTGLA Trigger: CGCCAGGCCCGTGCTAAAAATGCACAGGAGAAAGAAGCCTCTCCAGGTCCTTTCTATGGGTGTCCACATCAGGCTAGTCCTGTTGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTCACGGGCACGGAGTTaGCTTTTCTGGCCACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQSRARS*LFWPRG Trigger: GCCCCGTGGCCAGAAAAGCAAACTCCGTGCCCGTGA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS CCA 90 bp | CATGTTGGGAGATGTAGGCATACTGGCAACAGGACTAGCCTGATGTaGACACCCATAGAAAGGACCTGGAGAGGCTTCTTTCTCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: HVGRCRHTGNRTSLM*TPIERTWRGFFLLC Trigger: GCACAGGAGAAAGAAGCCTCTCCAGGTCCTTTCTATGGGTGTCCACATCAGGCTAGTCCTGTTGCCAGTATGCCTACATCTCCCAACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGAATATGGACTGGCCATaGCAGCAGTGTGAGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQNMDWP*QQCEPW Trigger: CCAGGGCTCACACTGCTGCAATGGCCAGTCCATATT...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATCACGGGCACGGAGTTaGCTTTTCTGGCCACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LISTQKIFPRRQPLMCNLSRARS*LFWPRG Trigger: GCCCCGTGGCCAGAAAAGCAAACTCCGTGCCCGTGA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGGATGGAGGATTGCTGTaGGGCACTTGTTGGTACTCC | + |
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Preference number: 5 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQDGGLL*GTCWYS Trigger: GGAGTACCAACAAGTGCCCAACAGCAATCCTCCATC...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTCTCCCATTGGCATGTaGGGAGATGTAGGCATACTG | + |
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Preference number: 5 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQSPIGM*GDVGIL Trigger: CAGTATGCCTACATCTCCCAACATGCCAATGGGAGA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTAAATATGGACTGGCCATaGCAGCAGTGTGAGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LISTQKIFPRRQPLMCNLNMDWP*QQCEPW Trigger: CCAGGGCTCACACTGCTGCAATGGCCAGTCCATATT...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTAGATGGAGGATTGCTGTaGGGCACTTGTTGGTACTCC | + |
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Preference number: 5 (lower is better) Translates to: LISTQKIFPRRQPLMCNLDGGLL*GTCWYS Trigger: GGAGTACCAACAAGTGCCCAACAGCAATCCTCCATC...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGTCCAAGATTTTCATCTaGCTGATTTCAGCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQSKIFI*LISAQA Trigger: AGCCTGTGCTGAAATCAGCAAGATGAAAATCTTGGA...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | GAGAACACACCAGTGGTCACACCCCTAAAGAAAAGTGACTTTCTCTTCCAACAGGTAGTATCATGGATCTaGGCCCAAAACTCCAAGATT | + |
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Preference number: 5 (lower is better) Translates to: ENTPVVTPLKKSDFLFQQVVSWI*AQNSKI Trigger: AATCTTGGAGTTTTGGGCCAAGATCCATGATACTAC...CTGTTGGAAGAGAAAGTCACTTTTCTTTAGGGGTGTGACCACTGGTGTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS-3UTR CAA 90 bp | CTAATTTCCACACAGAAAATCTTTCCCAGACGTCAACCTTTGATGTGTAACCTATCCAAGATTTTCATCTaGCTGATTTCAGCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LISTQKIFPRRQPLMCNLSKIFI*LISAQA Trigger: AGCCTGTGCTGAAATCAGCAAGATGAAAATCTTGGA...TAGGTTACACATCAAAGGTTGACGTCTGGGAAAGATTTTCTGTGTGGAAATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS GCA 72 bp | CCCATAGAAAGGACCTGGAGAGGCTTCTTTCTCCTGTaGATTTTTAGCACGGGCCTGGCGGCGCTTCTCACG | + |
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Preference number: 6 (lower is better) Translates to: PIERTWRGFFLL*IFSTGLAALLT Trigger: CGTGAGAAGCGCCGCCAGGCCCGTGCTAAAAATGCACAGGAGAAAGAAGCCTCTCCAGGTCCTTTCTATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS CAA 72 bp | GAGTGTGAAAAGGTAGACTGCTCTCCCATTGGCATGTaGGGAGATGTAGGCATACTGGCAACAGGACTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ECEKVDCSPIGM*GDVGILATGLA Trigger: GGCTAGTCCTGTTGCCAGTATGCCTACATCTCCCAACATGCCAATGGGAGAGCAGTCTACCTTTTCACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS CCA 72 bp | AGGACTAGCCTGATGTGGACACCCATAGAAAGGACCTaGAGAGGCTTCTTTCTCCTGTGCATTTTTAGCACG | + |
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Preference number: 6 (lower is better) Translates to: RTSLMWTPIERT*RGFFLLCIFST Trigger: CGTGCTAAAAATGCACAGGAGAAAGAAGCCTCTCCAGGTCCTTTCTATGGGTGTCCACATCAGGCTAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS GCA 72 bp | TCACTTGTACTTGTATATGAGTGTGAAAAGGTAGACTaGTCTCCCATTGGCATGTTGGGAGATGTAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: SLVLVYECEKVD*SPIGMLGDVGI Trigger: TATGCCTACATCTCCCAACATGCCAATGGGAGAGCAGTCTACCTTTTCACACTCATATACAAGTACAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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| CDS CAA 72 bp | TACTTCTCCATCAGGAACTGCACCAGTAAAACTACTTaGTGGTTAATAGGATCTTTACACCAGTCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: YFSIRNCTSKTT*WLIGSLHQSSV Trigger: CACTGAGGACTGGTGTAAAGATCCTATTAACCACAAAGTAGTTTTACTGGTGCAGTTCCTGATGGAGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088137.3 ENSMUST00000113955.2 |
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