Pregenerated sensors for MAGEB16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046942Ensembl transcript IDs: ENSMUST00000052283.7, ENSMUST00000114016.10
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCGAACACAGTAGGGTCTaGCCCATGAACCTTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSEHSRV*PMNLGH Trigger: GTGGCCAAGGTTCATGGGTCAGACCCTACTGTGTTC...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCACATCCTTGGAGACTTaGGTCTCCTCACTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSTSLET*VSSLVW Trigger: CCAGACCAGTGAGGAGACCCAAGTCTCCAAGGATGT...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCCTCAGTAGACTCGCTTaGAGAGTCATAGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSLSRLA*RVIGML Trigger: CAGCATCCCTATGACTCTTCAAGCGAGTCTACTGAG...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCTCTGTGCTATCTGACTaGTCTGGTGGAATGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSSVLSD*SGGMTG Trigger: CCCAGTCATTCCACCAGATCAGTCAGATAGCACAGA...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAGAACACAGTAGGGTCTaGCCCATGAACCTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQEHSRV*PMNLGH Trigger: GTGGCCAAGGTTCATGGGTCAGACCCTACTGTGTTC...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAACTGATCTGGTGGAATaGCTGGGCTACCCTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQTDLVE*LGYPAL Trigger: AAGTGCAGGGTAGCCCAGTCATTCCACCAGATCAGT...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCAGACTACACCCAGGATaGGTATCAGGAGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSRLHPG*VSGDQF Trigger: AAACTGGTCTCCTGATACTCATCCTGGGTGTAGTCT...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR GCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCATGACTGGGCTACCCTaGACTTCTTGGTCATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSMTGLP*TSWSSR Trigger: TCTTGATGACCAAGAAGTGCAGGGTAGCCCAGTCAT...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCACATCCTTGGAGACTTaGGTCTCCTCACTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQTMKNMAWCLYKLELCTSLET*VSSLVW Trigger: CCAGACCAGTGAGGAGACCCAAGTCTCCAAGGATGT...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCCTGACCCATGAACCTTaGCCACAAACTCTAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSLTHEP*PQTLTL Trigger: GAGTGTTAGAGTTTGTGGCCAAGGTTCATGGGTCAG...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCCTAGCCATAAGAAGTTaGGAAGAGGAACATGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSLAIRS*EEEHGS Trigger: GGAACCATGTTCCTCTTCTCAACTTCTTATGGCTAG...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAACTCAGTAGACTCGCTTaGAGAGTCATAGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQLSRLA*RVIGML Trigger: CAGCATCCCTATGACTCTTCAAGCGAGTCTACTGAG...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCTCACAGGTCTGGCCTTaGTCAGCTGCACATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGQTMKNMAWCLYKLELCSQVWP*SAAHSS Trigger: AGAAGAATGTGCAGCTGACCAAGGCCAGACCTGTGA...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCGCAACCTGTAGTTTCTaGGTCTCTTCACAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQTMKNMAWCLYKLELCATCSF*VSSQVW Trigger: CCAGACCTGTGAAGAGACCCAGAAACTACAGGTTGC...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCGATGCTGAAGATCACTaGAAGTACTGGCTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSDAEDH*KYWLSH Trigger: ATGAGACAGCCAGTACTTCCAGTGATCTTCAGCATC...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCATCTGGTGGAATGACTaGGCTACCCTGCACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGQTMKNMAWCLYKLELCIWWND*ATLHFL Trigger: CAAGAAGTGCAGGGTAGCCCAGTCATTCCACCAGAT...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAATCTGGTGGAATGACTaGGCTACCCTGCACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQIWWND*ATLHFL Trigger: CAAGAAGTGCAGGGTAGCCCAGTCATTCCACCAGAT...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAAGACTACACCCAGGATaGGTATCAGGAGACCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQRLHPG*VSGDQF Trigger: AAACTGGTCTCCTGATACTCATCCTGGGTGTAGTCT...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGTGCCTCTTCATACTaGGAAAGGAACACAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQTMKNMAWCLYKLELCSASSY*ERNTVG Trigger: CCCTACTGTGTTCCTTTCTCAGTATGAAGAGGCACT...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR TCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAAGTGCCTCTTCATACTaGGAAAGGAACACAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQSASSY*ERNTVG Trigger: CCCTACTGTGTTCCTTTCTCAGTATGAAGAGGCACT...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR GCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAATGACTGGGCTACCCTaGACTTCTTGGTCATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQMTGLP*TSWSSR Trigger: TCTTGATGACCAAGAAGTGCAGGGTAGCCCAGTCAT...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAGATGCTGAAGATCACTaGAAGTACTGGCTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQDAEDH*KYWLSH Trigger: ATGAGACAGCCAGTACTTCCAGTGATCTTCAGCATC...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR GCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAATCACAGGTAAATCTGTaGTATCTGACTGATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQSQVNL*YLTDLV Trigger: CACCAGATCAGTCAGATAGCACAGATTTACCTGTGA...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR GCA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCTCACAGGTAAATCTGTaGTATCTGACTGATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KGQTMKNMAWCLYKLELCSQVNL*YLTDLV Trigger: CACCAGATCAGTCAGATAGCACAGATTTACCTGTGA...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAGATCACTGGAAGTACTaGCTGTCTCATCTTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQDHWKY*LSHLQN Trigger: ATTCTGAAGATGAGACAGCCAGTACTTCCAGTGATC...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCAGCATAGATTCCCATTaGATTCAATACTTCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: GQTMKNMAWCLYKLELCSSIDSH*IQYFPN Trigger: ATTTGGGAAGTATTGAATCCAATGGGAATCTATGCT...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR GCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAATTCTTCTTCAATCAGTaGCTCTTCATACTGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQFFFNQ*LFILRK Trigger: CTTTCTCAGTATGAAGAGGCACTGATTGAAGAAGAA...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAAGCATAGATTCCCATTaGATTCAATACTTCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQSIDSH*IQYFPN Trigger: ATTTGGGAAGTATTGAATCCAATGGGAATCTATGCT...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CCA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAACATATTCATACTGTATaGGATCACTATTGGCTATTG | + |
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Preference number: 4 (lower is better) Translates to: THVLLFQITVQIDGIISQHIHTV*DHYWLL Trigger: CAATAGCCAATAGTGATCCCATACAGTATGAATATG...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CCA 90 bp | CATGGCTCCTCAACATCGATGGAGGCTGCTGCAACCTGTAGTTTCTaGGTCTCTTCACAGGTCTGGCCTTGGTCAGCTGCACATTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HGSSTSMEAAATCSF*VSSQVWPWSAAHSS Trigger: AGAAGAATGTGCAGCTGACCAAGGCCAGACCTGTGAAGAGACCCAGAAACTACAGGTTGCAGCAGCCTCCATCGATGTTGAGGAGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS GCA 90 bp | TACTGTATGGGATCACTATTGGCTATTGGCTGGTATTCCAGGTATTaGTCCCTCACAAACTCATCAGTTATCAGCTCTCTAGGGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: YCMGSLLAIGWYSRY*SLTNSSVISSLGSP Trigger: TGGTGACCCTAGAGAGCTGATAACTGATGAGTTTGTGAGGGAGCAATACCTGGAATACCAGCCAATAGCCAATAGTGATCCCATACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCTTCACAGGTCTGGCCTaGGTCAGCTGCACATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GQTMKNMAWCLYKLELCSFTGLA*VSCTFF Trigger: GAAGAATGTGCAGCTGACCAAGGCCAGACCTGTGAA...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAAGGTTCCTCCACATCCTaGGAGACTTGGGTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: THVLLFQITVQIDGIISQGSSTS*ETWVSS Trigger: TGAGGAGACCCAAGTCTCCAAGGATGTGGAGGAACC...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCGGTTCCTCCACATCCTaGGAGACTTGGGTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: KGQTMKNMAWCLYKLELCGSSTS*ETWVSS Trigger: TGAGGAGACCCAAGTCTCCAAGGATGTGGAGGAACC...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAATTCACAGGTCTGGCCTaGGTCAGCTGCACATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: THVLLFQITVQIDGIISQFTGLA*VSCTFF Trigger: GAAGAATGTGCAGCTGACCAAGGCCAGACCTGTGAA...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCCTGGTATTCCAGGTATaGCTCCCTCACAAACTCATC | + |
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Preference number: 5 (lower is better) Translates to: KGQTMKNMAWCLYKLELCLVFQV*LPHKLI Trigger: GATGAGTTTGTGAGGGAGCAATACCTGGAATACCAG...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAACTGGTATTCCAGGTATaGCTCCCTCACAAACTCATC | + |
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Preference number: 5 (lower is better) Translates to: THVLLFQITVQIDGIISQLVFQV*LPHKLI Trigger: GATGAGTTTGTGAGGGAGCAATACCTGGAATACCAG...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | GGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCAGCGATCACTATTGGCTATaGGCTGGTATTCCAGGTATT | + |
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Preference number: 5 (lower is better) Translates to: GQTMKNMAWCLYKLELCSDHYWL*AGIPGI Trigger: AATACCTGGAATACCAGCCAATAGCCAATAGTGATC...GCTGCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCGCTAGCCATAAGAAGTaGAGAAGAGGAACATGGTTC | + |
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Preference number: 5 (lower is better) Translates to: KGQTMKNMAWCLYKLELCASHKK*RRGTWF Trigger: GAACCATGTTCCTCTTCTCAACTTCTTATGGCTAGC...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | AAAGGGCAAACAATGAAAAACATGGCATGGTGCTTATACAAATTAGAACTATGCCAGCATAGATTCCCATaGGATTCAATACTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KGQTMKNMAWCLYKLELCQHRFP*DSILPK Trigger: TTTGGGAAGTATTGAATCCAATGGGAATCTATGCTG...GCATAGTTCTAATTTGTATAAGCACCATGCCATGTTTTTCATTGTTTGCCCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS-3UTR CAA 90 bp | ACGCATGTTTTACTATTCCAGATAACTGTACAGATAGATGGGATTATTTCCCAACAGCATAGATTCCCATaGGATTCAATACTTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: THVLLFQITVQIDGIISQQHRFP*DSILPK Trigger: TTTGGGAAGTATTGAATCCAATGGGAATCTATGCTG...TTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAATAGTAAAACATGCGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CCA 72 bp | TCAACATCGATGGAGGCTGCTGCAACCTGTAGTTTCTaGGTCTCTTCACAGGTCTGGCCTTGGTCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: STSMEAAATCSF*VSSQVWPWSAA Trigger: TGCAGCTGACCAAGGCCAGACCTGTGAAGAGACCCAGAAACTACAGGTTGCAGCAGCCTCCATCGATGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CCA 72 bp | GAAGAGGAACATGGTTCCTCCACATCCTTGGAGACTTaGGTCTCCTCACTGGTCTGGTCCTTCAGACTAGTA | + |
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Preference number: 6 (lower is better) Translates to: EEEHGSSTSLET*VSSLVWSFRLV Trigger: TACTAGTCTGAAGGACCAGACCAGTGAGGAGACCCAAGTCTCCAAGGATGTGGAGGAACCATGTTCCTCTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 72 bp | AGAAGAGGAACATGGTTCCTCCACATCCTTGGAGACTaGGGTCTCCTCACTGGTCTGGTCCTTCAGACTAGT | + |
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Preference number: 6 (lower is better) Translates to: RRGTWFLHILGD*GLLTGLVLQTS Trigger: ACTAGTCTGAAGGACCAGACCAGTGAGGAGACCCAAGTCTCCAAGGATGTGGAGGAACCATGTTCCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 90 bp | AAGAAGTTGAGAAGAGGAACATGGTTCCTCCACATCCTTGGAGACTaGGGTCTCCTCACTGGTCTGGTCCTTCAGACTAGTAGCCATAAG | + |
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Preference number: 6 (lower is better) Translates to: KKLRRGTWFLHILGD*GLLTGLVLQTSSHK Trigger: CTTATGGCTACTAGTCTGAAGGACCAGACCAGTGAGGAGACCCAAGTCTCCAAGGATGTGGAGGAACCATGTTCCTCTTCTCAACTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 90 bp | TTAGCCCGTAGCCCCCACACATATTCATACTGTATGGGATCACTATaGGCTATTGGCTGGTATTCCAGGTATTGCTCCCTCACAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: LARSPHTYSYCMGSL*AIGWYSRYCSLTNS Trigger: TGAGTTTGTGAGGGAGCAATACCTGGAATACCAGCCAATAGCCAATAGTGATCCCATACAGTATGAATATGTGTGGGGGCTACGGGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS TCA 72 bp | TCTTCAGAATCATCCTGGTCGCTAGCCATAAGAAGTTaGGAAGAGGAACATGGTTCCTCCACATCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSESSWSLAIRS*EEEHGSSTSLE Trigger: CTCCAAGGATGTGGAGGAACCATGTTCCTCTTCTCAACTTCTTATGGCTAGCGACCAGGATGATTCTGAAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 72 bp | AGCCCCCACACATATTCATACTGTATGGGATCACTATaGGCTATTGGCTGGTATTCCAGGTATTGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SPHTYSYCMGSL*AIGWYSRYCSL Trigger: GAGGGAGCAATACCTGGAATACCAGCCAATAGCCAATAGTGATCCCATACAGTATGAATATGTGTGGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS TCA 72 bp | CACTTCTTGGTCATCAAGATCCTCAGTAGACTCGCTTaGAGAGTCATAGGGATGCTGAAGATCACTGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: HFLVIKILSRLA*RVIGMLKITGS Trigger: ACTTCCAGTGATCTTCAGCATCCCTATGACTCTTCAAGCGAGTCTACTGAGGATCTTGATGACCAAGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 72 bp | ATCTTCAGAATCATCCTGGTCGCTAGCCATAAGAAGTaGAGAAGAGGAACATGGTTCCTCCACATCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: IFRIILVASHKK*RRGTWFLHILG Trigger: TCCAAGGATGTGGAGGAACCATGTTCCTCTTCTCAACTTCTTATGGCTAGCGACCAGGATGATTCTGAAGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 90 bp | GTAGCCCCCACACATATTCATACTGTATGGGATCACTATTGGCTATaGGCTGGTATTCCAGGTATTGCTCCCTCACAAACTCATCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: VAPTHIHTVWDHYWL*AGIPGIAPSQTHQL Trigger: TAACTGATGAGTTTGTGAGGGAGCAATACCTGGAATACCAGCCAATAGCCAATAGTGATCCCATACAGTATGAATATGTGTGGGGGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CCA 72 bp | CACATATTCATACTGTATGGGATCACTATTGGCTATTaGCTGGTATTCCAGGTATTGCTCCCTCACAAACTC | + |
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Preference number: 6 (lower is better) Translates to: HIFILYGITIGY*LVFQVLLPHKL Trigger: GAGTTTGTGAGGGAGCAATACCTGGAATACCAGCCAATAGCCAATAGTGATCCCATACAGTATGAATATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS CAA 72 bp | ACACATATTCATACTGTATGGGATCACTATTGGCTATaGGCTGGTATTCCAGGTATTGCTCCCTCACAAACT | + |
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Preference number: 6 (lower is better) Translates to: THIHTVWDHYWL*AGIPGIAPSQT Trigger: AGTTTGTGAGGGAGCAATACCTGGAATACCAGCCAATAGCCAATAGTGATCCCATACAGTATGAATATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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| CDS GCA 72 bp | CTAGAACTTTCACCAGAAGTAGAACTTGAATCAGCATaGTCTAATAGCATGGTAAGGGTTCTCTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LELSPEVELESA*SNSMVRVLSSS Trigger: AGAAGAAGAGAGAACCCTTACCATGCTATTAGAGCATGCTGATTCAAGTTCTACTTCTGGTGAAAGTTCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052283.7 ENSMUST00000114016.10 |
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