Pregenerated sensors for MAGEA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063728Ensembl transcript IDs: ENSMUST00000076986.4, ENSMUST00000112562.8
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATGCTCTCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTCCTGGTCATTGTCTaGTTCCTGTTGAGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: MLSTTQLSNKDTGILSITLLVIV*FLLSLS Trigger: GCTCAGGCTCAACAGGAATCAGACAATGACCAGGAG...GGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGAGAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR TCA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGCTCCTGGTCATTGTCTaGTTCCTGTTGAGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QLSNKDTGILSITLSYLGLLVIV*FLLSLS Trigger: GCTCAGGCTCAACAGGAATCAGACAATGACCAGGAG...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR TCA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGCATCTTCAAGCACTCTaGGGCCTCACTAAAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: QLSNKDTGILSITLSYLGHLQAL*GLTKDH Trigger: GTGATCTTTAGTGAGGCCTCAGAGTGCTTGAAGATG...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR TCA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTCATCTTCAAGCACTCTaGGGCCTCACTAAAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: STTQLSNKDTGILSITLSHLQAL*GLTKDH Trigger: GTGATCTTTAGTGAGGCCTCAGAGTGCTTGAAGATG...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR GCA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGAGAAATTGGAGCATCTaGTCAAGATCCAAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QLSNKDTGILSITLSYLGRNWSI*SRSKPW Trigger: CCAAGGCTTGGATCTTGAGCAGATGCTCCAATTTCT...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CCA 90 bp | ATGCTCTCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCAATGGTCAGAGAAATTaGAGCATCTGCTCAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: MLSTTQLSNKDTGILSITNGQRN*SICSRS Trigger: GGATCTTGAGCAGATGCTCCAATTTCTCTGACCATT...GGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGAGAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTACACCTTTGTGTTCTGTaGACTGTGCAACAAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSTTQLSNKDTGILSITLHLCVL*TVQQIK Trigger: CTTTATTTGTTGCACAGTGCACAGAACACAAAGGTG...TAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTAACTTTCCAACATTTCTaGTTTGGTAGGGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSTTQLSNKDTGILSITLTFQHF*FGRECL Trigger: AAGGCATTCCCTACCAAAGCAGAAATGTTGGAAAGT...TAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CCA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGTCAAGATCCAAGCCTTaGTCCTTTCTATCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: QLSNKDTGILSITLSYLGSRSKP*SFLSHL Trigger: GAGATGAGATAGAAAGGACCAAGGCTTGGATCTTGA...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CCA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTCAAGATCCAAGCCTTaGTCCTTTCTATCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: STTQLSNKDTGILSITLSSRSKP*SFLSHL Trigger: GAGATGAGATAGAAAGGACCAAGGCTTGGATCTTGA...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CCA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTAATGGTCAGAGAAATTaGAGCATCTGCTCAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: STTQLSNKDTGILSITLSNGQRN*SICSRS Trigger: GGATCTTGAGCAGATGCTCCAATTTCTCTGACCATT...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CCA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTGGCAGTACACTAGAATaGTCAGAGAAATTGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: STTQLSNKDTGILSITLSGSTLE*SEKLEH Trigger: ATGCTCCAATTTCTCTGACCATTCTAGTGTACTGCC...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR GCA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGCACCTTTGTGTTCTGTaGACTGTGCAACAAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: QLSNKDTGILSITLSYLGHLCVL*TVQQIK Trigger: CTTTATTTGTTGCACAGTGCACAGAACACAAAGGTG...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR GCA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGACTTTCCAACATTTCTaGTTTGGTAGGGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QLSNKDTGILSITLSYLGTFQHF*FGRECL Trigger: AAGGCATTCCCTACCAAAGCAGAAATGTTGGAAAGT...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS TCA 90 bp | CACTGTGCAACAAATAAAGTGGGTCTTCCAGGCCCCCTGATCCTTTaGTGGAAGCTTCCTCAGATGGGCTATCAGGGATGGAGGCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HCATNKVGLPGPLIL*WKLPQMGYQGWRPV Trigger: CACTGGCCTCCATCCCTGATAGCCCATCTGAGGAAGCTTCCATCAAAGGATCAGGGGGCCTGGAAGACCCACTTTATTTGTTGCACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS TCA 90 bp | CCTGCCTGTATTCCAGGTACCCTTCCTGCACAAACTCCTCAGAGATaGGCTTCCTGGGGTCTTTATGTATGTAAGGATCCCTCCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: PACIPGTLPAQTPQR*ASWGLYVCKDPSHH Trigger: GTGGTGGGAGGGATCCTTACATACATAAAGACCCCAGGAAGCTCATCTCTGAGGAGTTTGTGCAGGAAGGGTACCTGGAATACAGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS GCA 90 bp | CAAGATCCAAGCCTTGGTCCTTTCTATCTCATCTCGCAAAGCCTCTaGATACTTTTCAGGGTAGGCTCTGGGATGAGTCTTATTAATGCT | + |
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Preference number: 5 (lower is better) Translates to: QDPSLGPFYLISQSL*ILFRVGSGMSLINA Trigger: AGCATTAATAAGACTCATCCCAGAGCCTACCCTGAAAAGTATGCAGAGGCTTTGCGAGATGAGATAGAAAGGACCAAGGCTTGGATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTATAGGAGGATCACTATaGGGCACCTGCCTGTATTCC | + |
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Preference number: 5 (lower is better) Translates to: STTQLSNKDTGILSITLSIGGSL*GTCLYS Trigger: GGAATACAGGCAGGTGCCCAATAGTGATCCTCCTAT...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGCCAAGTCATACACCTTaGTGTTCTGTGCACTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: QLSNKDTGILSITLSYLGPSHTP*CSVHCA Trigger: TGCACAGTGCACAGAACACAAAGGTGTATGACTTGG...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTCCAAGTCATACACCTTaGTGTTCTGTGCACTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: STTQLSNKDTGILSITLSPSHTP*CSVHCA Trigger: TGCACAGTGCACAGAACACAAAGGTGTATGACTTGG...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | ATGCTCTCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCGAATGGTCAGAGAAATaGGAGCATCTGCTCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: MLSTTQLSNKDTGILSITEWSEK*EHLLKI Trigger: GATCTTGAGCAGATGCTCCAATTTCTCTGACCATTC...GGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGAGAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATGCCATACACTTTATTaGAGGTGGTGGTATCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LSTTQLSNKDTGILSITLCHTLY*RWWYLP Trigger: AGGAAGATACCACCACCTCAAATAAAGTGTATGGCA...TAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGGAATGGTCAGAGAAATaGGAGCATCTGCTCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: QLSNKDTGILSITLSYLGEWSEK*EHLLKI Trigger: GATCTTGAGCAGATGCTCCAATTTCTCTGACCATTC...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | TCCACCACCCAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTGCCATACACTTTATTaGAGGTGGTGGTATCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: STTQLSNKDTGILSITLSCHTLY*RWWYLP Trigger: AGGAAGATACCACCACCTCAAATAAAGTGTATGGCA...AGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTGGGTGGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS-3UTR CAA 90 bp | CAGCTCTCAAATAAGGATACAGGAATTTTATCAATAACCCTATCTTACCTGGGGTCCAACATTTCTGCTTaGGTAGGGAATGCCTTCATT | + |
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Preference number: 5 (lower is better) Translates to: QLSNKDTGILSITLSYLGSNISA*VGNAFI Trigger: AATGAAGGCATTCCCTACCAAAGCAGAAATGTTGGA...CCCCAGGTAAGATAGGGTTATTGATAAAATTCCTGTATCCTTATTTGAGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS TCA 72 bp | ACTGTGCAACAAATAAAGTGGGTCTTCCAGGCCCCCTaGTCCTTTGATGGAAGCTTCCTCAGATGGGCTATC | + |
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Preference number: 6 (lower is better) Translates to: TVQQIKWVFQAP*SFDGSFLRWAI Trigger: GATAGCCCATCTGAGGAAGCTTCCATCAAAGGATCAGGGGGCCTGGAAGACCCACTTTATTTGTTGCACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS GCA 72 bp | AGCCTTGGTCCTTTCTATCTCATCTCGCAAAGCCTCTaGATACTTTTCAGGGTAGGCTCTGGGATGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLGPFYLISQSL*ILFRVGSGMSL Trigger: AAGACTCATCCCAGAGCCTACCCTGAAAAGTATGCAGAGGCTTTGCGAGATGAGATAGAAAGGACCAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS CCA 72 bp | CAGAGAAATTGGAGCATCTGCTCAAGATCCAAGCCTTaGTCCTTTCTATCTCATCTCGCAAAGCCTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: QRNWSICSRSKP*SFLSHLAKPLH Trigger: ATGCAGAGGCTTTGCGAGATGAGATAGAAAGGACCAAGGCTTGGATCTTGAGCAGATGCTCCAATTTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS CAA 72 bp | TCAGAGAAATTGGAGCATCTGCTCAAGATCCAAGCCTaGGTCCTTTCTATCTCATCTCGCAAAGCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SEKLEHLLKIQA*VLSISSRKASA Trigger: TGCAGAGGCTTTGCGAGATGAGATAGAAAGGACCAAGGCTTGGATCTTGAGCAGATGCTCCAATTTCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS CAA 72 bp | AAAATGACACTCAGTACAGCTATGAGGATACCTGTCTaGGGCATACCCTGGACATCAGTCATCATGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: KMTLSTAMRIPV*GIPWTSVIMPS Trigger: TGATGGCATGATGACTGATGTCCAGGGTATGCCCAAGACAGGTATCCTCATAGCTGTACTGAGTGTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS CAA 90 bp | CTAGAATGGTCAGAGAAATTGGAGCATCTGCTCAAGATCCAAGCCTaGGTCCTTTCTATCTCATCTCGCAAAGCCTCTGCATACTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LEWSEKLEHLLKIQA*VLSISSRKASAYFS Trigger: TGAAAAGTATGCAGAGGCTTTGCGAGATGAGATAGAAAGGACCAAGGCTTGGATCTTGAGCAGATGCTCCAATTTCTCTGACCATTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS CAA 90 bp | TCATTTCATAGTTTAAAACCAGAAAGTCCACCAAGTCATACACCTTaGTGTTCTGTGCACTGTGCAACAAATAAAGTGGGTCTTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SFHSLKPESPPSHTP*CSVHCATNKVGLPG Trigger: GCCTGGAAGACCCACTTTATTTGTTGCACAGTGCACAGAACACAAAGGTGTATGACTTGGTGGACTTTCTGGTTTTAAACTATGAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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| CDS CAA 72 bp | AGTTTAAAACCAGAAAGTCCACCAAGTCATACACCTTaGTGTTCTGTGCACTGTGCAACAAATAAAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SLKPESPPSHTP*CSVHCATNKVG Trigger: ACCCACTTTATTTGTTGCACAGTGCACAGAACACAAAGGTGTATGACTTGGTGGACTTTCTGGTTTTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076986.4 ENSMUST00000112562.8 |
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