Pregenerated sensors for MAGEA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079349Ensembl transcript IDs: ENSMUST00000069556.4, ENSMUST00000169540.8
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CAGAGAATCCTTAAGTCACCCAAACAAAGCGAAAATTaGATGTGTTATGCTCTCCTCCACCCAGCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: QRILKSPKQSEN*MCYALLHPAVQ Trigger: TTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTTCGCTTTGTTTGGGTGACTTAAGGATTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169540.8 |
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| CDS-3UTR TCA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACGGCCCTCTGATCCTTTaGTGGAAGCTTCCTCAGATG | + |
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Preference number: 4 (lower is better) Translates to: GYSNGISDYDLELEGKCHGPLIL*WKLPQM Trigger: CATCTGAGGAAGCTTCCATCAAAGGATCAGAGGGCC...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR TCA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACGTCTTCCAGGCCCTCTaGTCCTTTGATGGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GYSNGISDYDLELEGKCHVFQAL*SFDGSF Trigger: GAAGCTTCCATCAAAGGATCAGAGGGCCTGGAAGAC...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR TCA 90 bp | AAAGCGAAAATTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTGGCCCTCTGATCCTTTaGTGGAAGCTTCCTCAGATG | + |
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Preference number: 4 (lower is better) Translates to: KAKIECVMLSSTQLSNEGGPLIL*WKLPQM Trigger: CATCTGAGGAAGCTTCCATCAAAGGATCAGAGGGCC...ACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTTCGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169540.8 |
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| CDS-3UTR TCA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACGTCTTGGGCATACCCTaGACATCAGTCATCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: GYSNGISDYDLELEGKCHVLGIP*TSVIIP Trigger: TGGGATGATGACTGATGTTCAGGGTATGCCCAAGAC...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CCA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACCCTCGGATGTCTCCATaGTCTCCTGGTCATTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: YSNGISDYDLELEGKCHYPRMSP*SPGHCL Trigger: TAGACAATGACCAGGAGACCATGGAGACATCCGAGG...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR TCA 90 bp | AAGCGAAAATTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACCCATACACTTTATTTaGGGTGGTGGTATCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KRKLNVLCSPPPSCPMRVPIHFI*GGGIFL Trigger: GAGGAAGATACCACCACCTCAAATAAAGTGTATGGG...TACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTTCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169540.8 |
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| CDS-3UTR CCA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACCTTTATTTGAGGTGGTaGTATCTTCCTCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YSNGISDYDLELEGKCHYLYLRW*YLPPPR Trigger: CCGAGGAGGAGGAAGATACCACCACCTCAAATAAAG...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR TCA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACCCCATACACTTTATTTaGGGTGGTGGTATCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: YSNGISDYDLELEGKCHYPIHFI*GGGIFL Trigger: GAGGAAGATACCACCACCTCAAATAAAGTGTATGGG...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR GCA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACGTAAGACTTTCATTTTaGTGGTTTCTGCAAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GYSNGISDYDLELEGKCHVRLSF*WFLQKP Trigger: GGGCTTTTGCAGAAACCAGCAAAATGAAAGTCTTAC...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR GCA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACGTAAGACTTTCATTTTaGTGGTTTCTGCAAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: YSNGISDYDLELEGKCHYVRLSF*WFLQKP Trigger: GGGCTTTTGCAGAAACCAGCAAAATGAAAGTCTTAC...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR GCA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACCTGTCTATCTCATCTTaGAAAGCCTCTGCATACTTT | + |
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Preference number: 4 (lower is better) Translates to: YSNGISDYDLELEGKCHYLSISS*KASAYF Trigger: AAAGTATGCAGAGGCTTTGCAAGATGAGATAGACAG...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CCA 90 bp | ACGATTATTAACATTTTGAGCTACAGAGAATCCTTAAGTCACCCAAACAAAGCGCCTCGGATGTCTCCATaGTCTCCTGGTCATTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TIINILSYRESLSHPNKAPRMSP*SPGHCL Trigger: TAGACAATGACCAGGAGACCATGGAGACATCCGAGG...CGCTTTGTTTGGGTGACTTAAGGATTCTCTGTAGCTCAAAATGTTAATAATCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169540.8 |
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| CDS-3UTR GCA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACACTTTCCAACATTTCTaGTTTGGTAGTGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YSNGISDYDLELEGKCHYTFQHF*FGSECL Trigger: AAGGCATTCACTACCAAAGCAGAAATGTTGGAAAGT...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR GCA 90 bp | ACGATTATTAACATTTTGAGCTACAGAGAATCCTTAAGTCACCCAAACAAAGCGACTTTCCAACATTTCTaGTTTGGTAGTGAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TIINILSYRESLSHPNKATFQHF*FGSECL Trigger: AAGGCATTCACTACCAAAGCAGAAATGTTGGAAAGT...CGCTTTGTTTGGGTGACTTAAGGATTCTCTGTAGCTCAAAATGTTAATAATCGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169540.8 |
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| CDS TCA 90 bp | AGGACTCTGGGGAGGACTTGGTATTCCACTCCCATACACTTTATTTaGGGTGGTGGTATCTTCCTCCTCCTCGGATGTCTCCATGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RTLGRTWYSTPIHFI*GGGIFLLLGCLHGL Trigger: GAGACCATGGAGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGGAGTGGAATACCAAGTCCTCCCCAGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS TCA 90 bp | CCTGCCTGTATTCCAGGTACCCTTCCTGCACAAACTCCTCAGAGATaGGCTTCCTGGGGTCTTTATGTATGTAAGGATTCCTCCCACCAT | + |
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Preference number: 5 (lower is better) Translates to: PACIPGTLPAQTPQR*ASWGLYVCKDSSHH Trigger: ATGGTGGGAGGAATCCTTACATACATAAAGACCCCAGGAAGCTCATCTCTGAGGAGTTTGTGCAGGAAGGGTACCTGGAATACAGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CCA 90 bp | CTTTATTTGAGGTGGTGGTATCTTCCTCCTCCTCGGATGTCTCCATaGTCTCCTGGTCATTGTCTAATTCCTGTTGGGCCTGAGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: LYLRWWYLPPPRMSP*SPGHCLIPVGPEHS Trigger: AGAGTGCTCAGGCCCAACAGGAATTAGACAATGACCAGGAGACCATGGAGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACGCACTCTCTTGGAGGTaGCAGTATTGGGTGTTATGG | + |
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Preference number: 5 (lower is better) Translates to: GYSNGISDYDLELEGKCHALSWR*QYWVLW Trigger: CCATAACACCCAATACTGCAACCTCCAAGAGAGTGC...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACAGCAGGTCAGAGGAGTaGGAGCATCTGTTCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: GYSNGISDYDLELEGKCHSRSEE*EHLFKI Trigger: GATCTTGAACAGATGCTCCAACTCCTCTGACCTGCT...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | CGAAAATTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACAGAGCAGGTCAGAGGAGTaGGAGCATCTGTTCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: RKLNVLCSPPPSCPMRVQSRSEE*EHLFKI Trigger: GATCTTGAACAGATGCTCCAACTCCTCTGACCTGCT...CTGTACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTTCAAGATCCAGGCCTaGGTCCTGTCTATCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: GYSNGISDYDLELEGKCHFKIQA*VLSISS Trigger: AGATGAGATAGACAGGACCAAGGCCTGGATCTTGAA...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACGCACTCTCTTGGAGGTaGCAGTATTGGGTGTTATGG | + |
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Preference number: 5 (lower is better) Translates to: YSNGISDYDLELEGKCHYALSWR*QYWVLW Trigger: CCATAACACCCAATACTGCAACCTCCAAGAGAGTGC...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACCCTGTCTATCTCATCTaGCAAAGCCTCTGCATACTT | + |
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Preference number: 5 (lower is better) Translates to: GYSNGISDYDLELEGKCHPVYLI*QSLCIL Trigger: AAGTATGCAGAGGCTTTGCAAGATGAGATAGACAGG...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | GGGTACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTCCCATACACTTTATTaGAGGTGGTGGTATCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GYSNGISDYDLELEGKCHSHTLY*RWWYLP Trigger: AGGAAGATACCACCACCTCAAATAAAGTGTATGGGA...GTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACTTCAAGATCCAGGCCTaGGTCCTGTCTATCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: YSNGISDYDLELEGKCHYFKIQA*VLSISS Trigger: AGATGAGATAGACAGGACCAAGGCCTGGATCTTGAA...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS-3UTR CAA 90 bp | TACAGCAATGGAATCAGTGACTATGACCTGGAGTTAGAAGGGAAATGCCACTACTCCCATACACTTTATTaGAGGTGGTGGTATCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: YSNGISDYDLELEGKCHYSHTLY*RWWYLP Trigger: AGGAAGATACCACCACCTCAAATAAAGTGTATGGGA...GTAGTGGCATTTCCCTTCTAACTCCAGGTCATAGTCACTGATTCCATTGCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CCA 72 bp | AGGTGGTGGTATCTTCCTCCTCCTCGGATGTCTCCATaGTCTCCTGGTCATTGTCTAATTCCTGTTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RWWYLPPPRMSP*SPGHCLIPVGP Trigger: AGGCCCAACAGGAATTAGACAATGACCAGGAGACCATGGAGACATCCGAGGAGGAGGAAGATACCACCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CAA 90 bp | GAGGACTCTGGGGAGGACTTGGTATTCCACTCCCATACACTTTATTaGAGGTGGTGGTATCTTCCTCCTCCTCGGATGTCTCCATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: EDSGEDLVFHSHTLY*RWWYLPPPRMSPWS Trigger: AGACCATGGAGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGGAGTGGAATACCAAGTCCTCCCCAGAGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS TCA 72 bp | GGGAGGACTTGGTATTCCACTCCCATACACTTTATTTaGGGTGGTGGTATCTTCCTCCTCCTCGGATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRTWYSTPIHFI*GGGIFLLLGCL Trigger: GAGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGGAGTGGAATACCAAGTCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS TCA 72 bp | ACAAATAAAGTGGGTCTTCCAGGCCCTCTGATCCTTTaGTGGAAGCTTCCTCAGATGGGCTATCAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: TNKVGLPGPLIL*WKLPQMGYQGW Trigger: CCATCCCTGATAGCCCATCTGAGGAAGCTTCCATCAAAGGATCAGAGGGCCTGGAAGACCCACTTTATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CAA 72 bp | GGGGAGGACTTGGTATTCCACTCCCATACACTTTATTaGAGGTGGTGGTATCTTCCTCCTCCTCGGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: GEDLVFHSHTLY*RWWYLPPPRMS Trigger: AGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGGAGTGGAATACCAAGTCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS TCA 72 bp | ATGGTCTCCTGGTCATTGTCTAATTCCTGTTGGGCCTaGGCACTCTCTTGGAGGTTGCAGTATTGGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: MVSWSLSNSCWA*ALSWRLQYWVL Trigger: TAACACCCAATACTGCAACCTCCAAGAGAGTGCTCAGGCCCAACAGGAATTAGACAATGACCAGGAGACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CCA 72 bp | GACTTGGTATTCCACTCCCATACACTTTATTTGAGGTaGTGGTATCTTCCTCCTCCTCGGATGTCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: DLVFHSHTLYLR*WYLPPPRMSPW Trigger: CCATGGAGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGGAGTGGAATACCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS TCA 72 bp | ATTGTGCAACAAATAAAGTGGGTCTTCCAGGCCCTCTaGTCCTTTGATGGAAGCTTCCTCAGATGGGCTATC | + |
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Preference number: 6 (lower is better) Translates to: IVQQIKWVFQAL*SFDGSFLRWAI Trigger: GATAGCCCATCTGAGGAAGCTTCCATCAAAGGATCAGAGGGCCTGGAAGACCCACTTTATTTGTTGCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS TCA 72 bp | ATTCCAGGTACCCTTCCTGCACAAACTCCTCAGAGATaGGCTTCCTGGGGTCTTTATGTATGTAAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: IPGTLPAQTPQR*ASWGLYVCKDS Trigger: GGAATCCTTACATACATAAAGACCCCAGGAAGCTCATCTCTGAGGAGTTTGTGCAGGAAGGGTACCTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CCA 72 bp | TTGGTATTCCACTCCCATACACTTTATTTGAGGTGGTaGTATCTTCCTCCTCCTCGGATGTCTCCATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LVFHSHTLYLRW*YLPPPRMSPWS Trigger: AGACCATGGAGACATCCGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGGAGTGGAATACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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| CDS CAA 90 bp | TCATTTGGTATTTTAAAACCAGAAAGTCCACCAAGTCATACACCTTaGTGTTCTGTGCATTGTGCAACAAATAAAGTGGGTCTTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SFGILKPESPPSHTP*CSVHCATNKVGLPG Trigger: GCCTGGAAGACCCACTTTATTTGTTGCACAATGCACAGAACACAAAGGTGTATGACTTGGTGGACTTTCTGGTTTTAAAATACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069556.4 ENSMUST00000169540.8 |
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