Pregenerated sensors for MAGEA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055746Ensembl transcript IDs: ENSMUST00000069477.8, ENSMUST00000112559.8, ENSMUST00000178950.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAACATTTTGGGCTACCAAGAATCCTCAAGTCACCCAAACAGAGTaGAAATTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATG | + |
|
Preference number: 1 (lower is better) Translates to: LTFWATKNPQVTQTE*KLNVLCSPPPSCPM Trigger: CATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTTCACTCTGTTTGGGTGACTTGAGGATTCTTGGTAGCCCAAAATGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069477.8 |
||
| 3UTR TCA 72 bp | TGGGCTACCAAGAATCCTCAAGTCACCCAAACAGAGTaGAAATTGAATGTGTTATGCTCTCCTCCACCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WATKNPQVTQTE*KLNVLCSPPPS Trigger: GCTGGGTGGAGGAGAGCATAACACATTCAATTTTCACTCTGTTTGGGTGACTTGAGGATTCTTGGTAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069477.8 |
||
| 3UTR CCA 72 bp | AAACTATTGGACCTTATACTACGATTATTAACATTTTaGGCTACCAAGAATCCTCAAGTCACCCAAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLLDLILRLLTF*ATKNPQVTQTE Trigger: CTCTGTTTGGGTGACTTGAGGATTCTTGGTAGCCCAAAATGTTAATAATCGTAGTATAAGGTCCAATAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069477.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGGAATCAGTGACTCTGTCTGACCTGGGGTTAGAAGGGAAATGCCACTACCACTCTCTTGGAGGCTaGAGTATTGGGTGTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMESVTLSDLGLEGKCHYHSLGG*SIGCYG Trigger: CCCATAACACCCAATACTGCAGCCTCCAAGAGAGTG...GTAGTGGCATTTCCCTTCTAACCCCAGGTCAGACAGAGTCACTGATTCCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR GCA 90 bp | AATGAGGGTACAGCAATGGAATCAGTGACTCTGTCTGACCTGGGGTTAGAAGGGCACTCTCTTGGAGGCTaGAGTATTGGGTGTTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEGTAMESVTLSDLGLEGHSLGG*SIGCYG Trigger: CCCATAACACCCAATACTGCAGCCTCCAAGAGAGTG...CCCTTCTAACCCCAGGTCAGACAGAGTCACTGATTCCATTGCTGTACCCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACAGCAATGGAATCATTCAGGCACCCTTCCTaGACAAACTCCTCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CVMLSSTQLSNEGTAMESFRHPS*TNSSEM Trigger: CATCTCTGAGGAGTTTGTGCAGGAAGGGTGCCTGAA...TGATTCCATTGCTGTACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR CCA 90 bp | GCAATGGAATCAGTGACTCTGTCTGACCTGGGGTTAGAAGGGAAATGCCACTACACTCTGGGGAGGACTTaGTATTCCACTGCCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: AMESVTLSDLGLEGKCHYTLGRT*YSTAIH Trigger: GTGTATGGCAGTGGAATACCAAGTCCTCCCCAGAGT...GTAGTGGCATTTCCCTTCTAACCCCAGGTCAGACAGAGTCACTGATTCCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAATGGAATCAGTGACTCTGTCTGACCTGGGGTTAGAAGGGAAATGCCACGTCTCCATGGTCTCCTaGTCATTGTCTAATTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAMESVTLSDLGLEGKCHVSMVS*SLSNSC Trigger: ACAGGAATTAGACAATGACCAGGAGACCATGGAGAC...GTGGCATTTCCCTTCTAACCCCAGGTCAGACAGAGTCACTGATTCCATTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGCAATGGAATCAGTGACTCTGTCTGACCTGGGGTTAGAAGGGAAATGCGTCTCCATGGTCTCCTaGTCATTGTCTAATTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTAMESVTLSDLGLEGKCVSMVS*SLSNSC Trigger: ACAGGAATTAGACAATGACCAGGAGACCATGGAGAC...GCATTTCCCTTCTAACCCCAGGTCAGACAGAGTCACTGATTCCATTGCTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR CCA 90 bp | TTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACAGCAATGGCTTTATTTGAGGTGGTaGTATCTTCCTCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNVLCSPPPSCPMRVQQWLYLRW*YLPPPL Trigger: CAGAGGAGGAGGAAGATACCACCACCTCAAATAAAG...CCATTGCTGTACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR CCA 90 bp | AAAATTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACAGCAACTCTGGGGAGGACTTaGTATTCCACTGCCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: KIECVMLSSTQLSNEGTATLGRT*YSTAIH Trigger: GTGTATGGCAGTGGAATACCAAGTCCTCCCCAGAGT...TGCTGTACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR GCA 90 bp | TTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACAGCAATGGGACTTGGTATTCCACTaGCATACACTTTATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNVLCSPPPSCPMRVQQWDLVFH*HTLYLR Trigger: CCTCAAATAAAGTGTATGGCAGTGGAATACCAAGTC...CCATTGCTGTACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTGAATGTGTTATGCTCTCCTCCACCCAGCTGTCCAATGAGGGTACAGCAGACTTGGTATTCCACTaGCATACACTTTATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIECVMLSSTQLSNEGTADLVFH*HTLYLR Trigger: CCTCAAATAAAGTGTATGGCAGTGGAATACCAAGTC...TGCTGTACCCTCATTGGACAGCTGGGTGGAGGAGAGCATAACACATTCAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS CCA 90 bp | GGGGAGGACTTGGTATTCCACTGCCATACACTTTATTTGAGGTGGTaGTATCTTCCTCCTCCTCTGATGTCTCCATGGTCTCCTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GEDLVFHCHTLYLRW*YLPPPLMSPWSPGH Trigger: ATGACCAGGAGACCATGGAGACATCAGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGCAGTGGAATACCAAGTCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS CAA 90 bp | GAGGACTCTGGGGAGGACTTGGTATTCCACTGCCATACACTTTATTaGAGGTGGTGGTATCTTCCTCCTCCTCTGATGTCTCCATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EDSGEDLVFHCHTLY*RWWYLPPPLMSPWS Trigger: AGACCATGGAGACATCAGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGCAGTGGAATACCAAGTCCTCCCCAGAGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS CAA 90 bp | GGAGCATCTGTTCAAGATCCAGGCCTTGGTCCTGTCTATCTCATCTaGCAAAGCCTCTGCATACTTTTCAGGGTAGGCTCTGGGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GASVQDPGLGPVYLI*QSLCILFRVGSGMS Trigger: ACTCATCCCAGAGCCTACCCTGAAAAGTATGCAGAGGCTTTGCAAGATGAGATAGACAGGACCAAGGCCTGGATCTTGAACAGATGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS CAA 90 bp | GTGAGCAGGTCAGAGGAGTTGGAGCATCTGTTCAAGATCCAGGCCTaGGTCCTGTCTATCTCATCTTGCAAAGCCTCTGCATACTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSRSEELEHLFKIQA*VLSISSCKASAYFS Trigger: TGAAAAGTATGCAGAGGCTTTGCAAGATGAGATAGACAGGACCAAGGCCTGGATCTTGAACAGATGCTCCAACTCCTCTGACCTGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS TCA 72 bp | ATTGTGCAACAAATAAAGTGGGTCTTCCAGGCCCCCTaGTCCTTTGATGGAAGCTTCCTCAGATGGGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: IVQQIKWVFQAP*SFDGSFLRWAI Trigger: GATAGCCCATCTGAGGAAGCTTCCATCAAAGGATCAGGGGGCCTGGAAGACCCACTTTATTTGTTGCACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS TCA 72 bp | ATTTCAGGCACCCTTCCTGCACAAACTCCTCAGAGATaGGCTTCCTGGGGTCTTTATGTATGTAAGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: ISGTLPAQTPQR*ASWGLYVCKDP Trigger: GGGATCCTTACATACATAAAGACCCCAGGAAGCTCATCTCTGAGGAGTTTGTGCAGGAAGGGTGCCTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS CCA 72 bp | GACTTGGTATTCCACTGCCATACACTTTATTTGAGGTaGTGGTATCTTCCTCCTCCTCTGATGTCTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: DLVFHCHTLYLR*WYLPPPLMSPW Trigger: CCATGGAGACATCAGAGGAGGAGGAAGATACCACCACCTCAAATAAAGTGTATGGCAGTGGAATACCAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||
| CDS CAA 90 bp | TCATTTGATAGTTTAAAACCAGAAAGTCCACCAAGTCATACACCTTaGTGTTCTGTGCATTGTGCAACAAATAAAGTGGGTCTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SFDSLKPESPPSHTP*CSVHCATNKVGLPG Trigger: GCCTGGAAGACCCACTTTATTTGTTGCACAATGCACAGAACACAAAGGTGTATGACTTGGTGGACTTTCTGGTTTTAAACTATCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069477.8 ENSMUST00000112559.8 ENSMUST00000178950.2 |
||