Pregenerated sensors for MAGEA14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031118Ensembl transcript IDs: ENSMUST00000033449.8, ENSMUST00000114866.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTTTCCAGCTCTCAAATAAGGGAACAGTACGTAGACTCTGCCTaGCCTGATGTTGGATGGGAATGGCCAGTGTGCTGGAATGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: PLSSSQIREQYVDSA*PDVGWEWPVCWNVC Trigger: GCACACATTCCAGCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTCCCTTATTTGAGAGCTGGAAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| 3UTR CCA 90 bp | CATTTCATAACAAGAAAGCCTGAGTCACAGTCAGTACAGGAAGAATaGAATAGTTCACAGCTCCCTCTTTCCAGCTCTCAAATAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: HFITRKPESQSVQEE*NSSQLPLSSSQIRE Trigger: TTCCCTTATTTGAGAGCTGGAAAGAGGGAGCTGTGAACTATTCCATTCTTCCTGTACTGACTGTGACTCAGGCTTTCTTGTTATGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATAACAAGAAAGCCTGAGTCACAGTCAGTACAGGAAGAATGGAATAGTTCATACGTAGACTCTGCCTaGCCTGATGTTGGATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FITRKPESQSVQEEWNSSYVDSA*PDVGWE Trigger: TTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTA...TGAACTATTCCATTCTTCCTGTACTGACTGTGACTCAGGCTTTCTTGTTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGTTGTTGACATTTATGATCTTAAAACTGTCCAGATAATGAGCCTTGGAGTAGATGTTGGATGGGAATaGCCAGTGTGCTGGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: CVVDIYDLKTVQIMSLGVDVGWE*PVCWNV Trigger: CACATTCCAGCACACTGGCCATTCCCATCCAACATC...TACTCCAAGGCTCATTATCTGGACAGTTTTAAGATCATAAATGTCAACAACGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| 3UTR CCA 72 bp | AGCTCTCAAATAAGGGAACAGTACGTAGACTCTGCCTaGCCTGATGTTGGATGGGAATGGCCAGTGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SSQIREQYVDSA*PDVGWEWPVCW Trigger: CCAGCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTCCCTTATTTGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| 3UTR CCA 72 bp | ACAAGAAAGCCTGAGTCACAGTCAGTACAGGAAGAATaGAATAGTTCACAGCTCCCTCTTTCCAGCTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: TRKPESQSVQEE*NSSQLPLSSSQ Trigger: TTGAGAGCTGGAAAGAGGGAGCTGTGAACTATTCCATTCTTCCTGTACTGACTGTGACTCAGGCTTTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | CAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCTGGGGCCTCTTCTTCGCCTaGCTCCAGGTCTCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QYVDSAWPDVGWEWPVCWGLFFA*LQVSCL Trigger: GAGACAAGAGACCTGGAGGCAGGCGAAGAAGAGGCC...CCAGCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | AGGGAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGGGTGGTTTCAGCATGTaGCCTCGGCCCCCACAGATA | + |
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Preference number: 4 (lower is better) Translates to: REQYVDSAWPDVGWEWPVGGFSM*PRPPQI Trigger: TATCTGTGGGGGCCGAGGGCACATGCTGAAACCACC...CACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | GAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCGTACATCTCCTGAGGTaGTGGCCTCTTCTTCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: EQYVDSAWPDVGWEWPVCVHLLR*WPLLRL Trigger: CAGGCGAAGAAGAGGCCAGCACCTCAGGAGATGTAC...GCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR CCA 90 bp | AGGGAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGAGAGGCCTCAACAGATaGTACCCCTGCAGTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: REQYVDSAWPDVGWEWPVRGLNR*YPCSGR Trigger: CCTTCCACTGCAGGGGTACCATCTGTTGAGGCCTCT...CACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | CAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCTGGAACAGATGGTACCCCTaGAGTGGAAGGAAAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QYVDSAWPDVGWEWPVCWNRWYP*SGRKGS Trigger: GCTTCCTTTCCTTCCACTGCAGGGGTACCATCTGTT...CCAGCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR TCA 90 bp | CAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCTGGCTGGGTCCCCATATATaGAATGATCTCTCCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QYVDSAWPDVGWEWPVCWLGPHI*NDLSLH Trigger: ATGCAGGGAGAGATCATTTCATATATGGGGACCCAG...CCAGCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | GAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCGCCTTACATGTCTGCTaGTTTCTCCTATACTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: EQYVDSAWPDVGWEWPVCALHVC*FLLYLR Trigger: CCTTAAGTATAGGAGAAAGCAGCAGACATGTAAGGC...GCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | AGGGAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGCATATACAGAATCTCTaGCTTACATGTCTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: REQYVDSAWPDVGWEWPVHIQNL*LTCLLL Trigger: AAGCAGCAGACATGTAAGGCAGAGATTCTGTATATG...CACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | GAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCATCTTTCAAAGCATCTaGATACCTAGTTGGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: EQYVDSAWPDVGWEWPVCIFQSI*IPSWVG Trigger: TCCTACCCAACTAGGTATGCAGATGCTTTGAAAGAT...GCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | CAGCTCCCTCTTTCCAGCTCTCAAATAAGGGAACAGTACGTAGACTCTGCCTGGTCTGCCTTACATGTCTaGTGCTTTCTCCTATACTTA | + |
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Preference number: 4 (lower is better) Translates to: QLPLSSSQIREQYVDSAWSALHV*CFLLYL Trigger: TAAGTATAGGAGAAAGCAGCAGACATGTAAGGCAGA...CCAGGCAGAGTCTACGTACTGTTCCCTTATTTGAGAGCTGGAAAGAGGGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR TCA 90 bp | ATTTATGATCTTAAAACTGTCCAGATAATGAGCCTTGGAGTACAAGTAGCAACAACCCAGTACATCTCCTaGGGTGCTGGCCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IYDLKTVQIMSLGVQVATTQYIS*GAGLFF Trigger: GAAGAAGAGGCCAGCACCTCAGGAGATGTACTGGGT...TGTTGCTACTTGTACTCCAAGGCTCATTATCTGGACAGTTTTAAGATCATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR CCA 90 bp | TGCGTTGTTGACATTTATGATCTTAAAACTGTCCAGATAATGAGCCTTGGAGTAATGGTACCCCTGCAGTaGAAGGAAAGGAAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CVVDIYDLKTVQIMSLGVMVPLQ*KERKLS Trigger: AGAGAGCTTCCTTTCCTTCCACTGCAGGGGTACCAT...TACTCCAAGGCTCATTATCTGGACAGTTTTAAGATCATAAATGTCAACAACGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR TCA 90 bp | TTCATAACAAGAAAGCCTGAGTCACAGTCAGTACAGGAAGAATGGAATAGTTCATCCCCATATATGAAATaGTCTCTCCCTGCATACAGC | + |
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Preference number: 4 (lower is better) Translates to: FITRKPESQSVQEEWNSSSPYMK*SLPAYS Trigger: GCTGTATGCAGGGAGAGATCATTTCATATATGGGGA...TGAACTATTCCATTCTTCCTGTACTGACTGTGACTCAGGCTTTCTTGTTATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | GTCCAGATAATGAGCCTTGGAGTACAAGTAGCAACATTTCATAACAAGAAAGCCTTACTATTGAGTATCTaGTGCCTAAGGATGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VQIMSLGVQVATFHNKKALLLSI*CLRMSG Trigger: CCCAGACATCCTTAGGCAGCAGATACTCAATAGTAA...GGCTTTCTTGTTATGAAATGTTGCTACTTGTACTCCAAGGCTCATTATCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | ACTGTCCAGATAATGAGCCTTGGAGTACAAGTAGCAACATTTCATAACAAGAAAAAAACTCTATTTGGCTaGCAGAGGCCTCAACAGATG | + |
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Preference number: 4 (lower is better) Translates to: TVQIMSLGVQVATFHNKKKTLFG*QRPQQM Trigger: CATCTGTTGAGGCCTCTGGCAGCCAAATAGAGTTTT...TTTCTTGTTATGAAATGTTGCTACTTGTACTCCAAGGCTCATTATCTGGACAGT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR GCA 90 bp | TGCGTTGTTGACATTTATGATCTTAAAACTGTCCAGATAATGAGCCTTGGAGTAGAAATGATCTCTCCCTaGATACAGCCCCATGTTATT | + |
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Preference number: 4 (lower is better) Translates to: CVVDIYDLKTVQIMSLGVEMISP*IQPHVI Trigger: AATAACATGGGGCTGTATGCAGGGAGAGATCATTTC...TACTCCAAGGCTCATTATCTGGACAGTTTTAAGATCATAAATGTCAACAACGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR CCA 90 bp | ACTGTCCAGATAATGAGCCTTGGAGTACAAGTAGCAACATTTCATAACAAGAAACTGCCTAAGGATGTCTaGGTAAAACTCTATTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TVQIMSLGVQVATFHNKKLPKDV*VKLYLA Trigger: AGCCAAATAGAGTTTTACCCAGACATCCTTAGGCAG...TTTCTTGTTATGAAATGTTGCTACTTGTACTCCAAGGCTCATTATCTGGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS CCA 90 bp | ACTCTATTTGGCTGCCAGAGGCCTCAACAGATGGTACCCCTGCAGTaGAAGGAAAGGAAGCTCTCTGAGCACCCTGGGATGAACCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: TLFGCQRPQQMVPLQ*KERKLSEHPGMNPV Trigger: TACTGGGTTCATCCCAGGGTGCTCAGAGAGCTTCCTTTCCTTCCACTGCAGGGGTACCATCTGTTGAGGCCTCTGGCAGCCAAATAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS CCA 90 bp | GATGTCTGGGTAAAACTCTATTTGGCTGCCAGAGGCCTCAACAGATaGTACCCCTGCAGTGGAAGGAAAGGAAGCTCTCTGAGCACCCTG | + |
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Preference number: 5 (lower is better) Translates to: DVWVKLYLAARGLNR*YPCSGRKGSSLSTL Trigger: CAGGGTGCTCAGAGAGCTTCCTTTCCTTCCACTGCAGGGGTACCATCTGTTGAGGCCTCTGGCAGCCAAATAGAGTTTTACCCAGACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS-3UTR CAA 90 bp | GAACAGTACGTAGACTCTGCCTGGCCTGATGTTGGATGGGAATGGCCAGTGTGCTGGGTAAAACTCTATTaGGCTGCCAGAGGCCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: EQYVDSAWPDVGWEWPVCWVKLY*AARGLN Trigger: GTTGAGGCCTCTGGCAGCCAAATAGAGTTTTACCCA...GCACACTGGCCATTCCCATCCAACATCAGGCCAGGCAGAGTCTACGTACTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS GCA 90 bp | CTCCCTGCATACAGCCCCATGTTATTCAATATACGCCACAACTCCTaGTCGCTGGCACAATTGTCCTGTATAAAGATGATGCATAGCACG | + |
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Preference number: 5 (lower is better) Translates to: LPAYSPMLFNIRHNS*SLAQLSCIKMMHST Trigger: CGTGCTATGCATCATCTTTATACAGGACAATTGTGCCAGCGAGCAGGAGTTGTGGCGTATATTGAATAACATGGGGCTGTATGCAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 90 bp | GGAGGATCACTGCCTGGCACCTGTCTGCATTCTAGATATCCTTCCTaGACAAAATGTTCAGTTATAAGAACACCTGGGTCCCCATATATG | + |
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Preference number: 5 (lower is better) Translates to: GGSLPGTCLHSRYPS*TKCSVIRTPGSPYM Trigger: CATATATGGGGACCCAGGTGTTCTTATAACTGAACATTTTGTGCAGGAAGGATATCTAGAATGCAGACAGGTGCCAGGCAGTGATCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 90 bp | AGTTATAAGAACACCTGGGTCCCCATATATGAAATGATCTCTCCCTaGATACAGCCCCATGTTATTCAATATACGCCACAACTCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SYKNTWVPIYEMISP*IQPHVIQYTPQLLL Trigger: GAGCAGGAGTTGTGGCGTATATTGAATAACATGGGGCTGTATGCAGGGAGAGATCATTTCATATATGGGGACCCAGGTGTTCTTATAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 90 bp | TCTTTCTATTATTTCAAGGCCAAACGTCAGCCTCAAGCATTCAGATaGCTTAGTAAAGATGGCAGGGAAGTGATCCTCATAACCTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: SFYYFKAKRQPQAFR*LSKDGREVILITSD Trigger: ATCCGAGGTTATGAGGATCACTTCCCTGCCATCTTTACTAAGGCATCTGAATGCTTGAGGCTGACGTTTGGCCTTGAAATAATAGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 90 bp | AGGGAAGTGATCCTCATAACCTCGGATGACCATATACAGAATCTCTaGCTTACATGTCTGCTGCTTTCTCCTATACTTAAGGATCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: REVILITSDDHIQNL*LTCLLLSPILKDQE Trigger: TTCTTGATCCTTAAGTATAGGAGAAAGCAGCAGACATGTAAGGCAGAGATTCTGTATATGGTCATCCGAGGTTATGAGGATCACTTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS-3UTR CAA 90 bp | TTCATAACAAGAAAGCCTGAGTCACAGTCAGTACAGGAAGAATGGAATAGTTCATGCTCGCTGGCACAATaGTCCTGTATAAAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: FITRKPESQSVQEEWNSSCSLAQ*SCIKMM Trigger: CATCATCTTTATACAGGACAATTGTGCCAGCGAGCA...TGAACTATTCCATTCTTCCTGTACTGACTGTGACTCAGGCTTTCTTGTTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS-3UTR CAA 90 bp | TGCGTTGTTGACATTTATGATCTTAAAACTGTCCAGATAATGAGCCTTGGAGTATCAATTGTTTTACTATaGAGTATCTGCTGCCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: CVVDIYDLKTVQIMSLGVSIVLL*SICCLR Trigger: CCTTAGGCAGCAGATACTCAATAGTAAAACAATTGA...TACTCCAAGGCTCATTATCTGGACAGTTTTAAGATCATAAATGTCAACAACGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033449.8 |
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| CDS CCA 72 bp | CACCCTGGGATGAACCCAGTACATCTCCTGAGGTGCTaGCCTCTTCTTCGCCTGCCTCCAGGTCTCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: HPGMNPVHLLRC*PLLRLPPGLLS Trigger: AGACAAGAGACCTGGAGGCAGGCGAAGAAGAGGCCAGCACCTCAGGAGATGTACTGGGTTCATCCCAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS TCA 72 bp | GATGGTACCCCTGCAGTGGAAGGAAAGGAAGCTCTCTaGGCACCCTGGGATGAACCCAGTACATCTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: DGTPAVEGKEAL*APWDEPSTSPE Trigger: CTCAGGAGATGTACTGGGTTCATCCCAGGGTGCTCAGAGAGCTTCCTTTCCTTCCACTGCAGGGGTACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 72 bp | TATTTGGCTGCCAGAGGCCTCAACAGATGGTACCCCTaGAGTGGAAGGAAAGGAAGCTCTCTGAGCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: YLAARGLNRWYP*SGRKGSSLSTL Trigger: CAGGGTGCTCAGAGAGCTTCCTTTCCTTCCACTGCAGGGGTACCATCTGTTGAGGCCTCTGGCAGCCAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS CCA 72 bp | GTAAAACTCTATTTGGCTGCCAGAGGCCTCAACAGATaGTACCCCTGCAGTGGAAGGAAAGGAAGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VKLYLAARGLNR*YPCSGRKGSSL Trigger: CAGAGAGCTTCCTTTCCTTCCACTGCAGGGGTACCATCTGTTGAGGCCTCTGGCAGCCAAATAGAGTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS CAA 72 bp | TATCTGCTGCCTAAGGATGTCTGGGTAAAACTCTATTaGGCTGCCAGAGGCCTCAACAGATGGTACCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: YLLPKDVWVKLY*AARGLNRWYPC Trigger: GCAGGGGTACCATCTGTTGAGGCCTCTGGCAGCCAAATAGAGTTTTACCCAGACATCCTTAGGCAGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 72 bp | TATTTCAAGGCCAAACGTCAGCCTCAAGCATTCAGATaGCTTAGTAAAGATGGCAGGGAAGTGATCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: YFKAKRQPQAFR*LSKDGREVILI Trigger: TATGAGGATCACTTCCCTGCCATCTTTACTAAGGCATCTGAATGCTTGAGGCTGACGTTTGGCCTTGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 72 bp | TACAGCCCCATGTTATTCAATATACGCCACAACTCCTaGTCGCTGGCACAATTGTCCTGTATAAAGATGATG | + |
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Preference number: 6 (lower is better) Translates to: YSPMLFNIRHNS*SLAQLSCIKMM Trigger: CATCATCTTTATACAGGACAATTGTGCCAGCGAGCAGGAGTTGTGGCGTATATTGAATAACATGGGGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 72 bp | AACACCTGGGTCCCCATATATGAAATGATCTCTCCCTaGATACAGCCCCATGTTATTCAATATACGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: NTWVPIYEMISP*IQPHVIQYTPQ Trigger: TTGTGGCGTATATTGAATAACATGGGGCTGTATGCAGGGAGAGATCATTTCATATATGGGGACCCAGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS CCA 72 bp | TGTTTTACTATTGAGTATCTGCTGCCTAAGGATGTCTaGGTAAAACTCTATTTGGCTGCCAGAGGCCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: CFTIEYLLPKDV*VKLYLAARGLN Trigger: GTTGAGGCCTCTGGCAGCCAAATAGAGTTTTACCCAGACATCCTTAGGCAGCAGATACTCAATAGTAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS CAA 90 bp | CCCATGTTATTCAATATACGCCACAACTCCTGCTCGCTGGCACAATaGTCCTGTATAAAGATGATGCATAGCACGATGATTAGTAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PMLFNIRHNSCSLAQ*SCIKMMHSTMISKP Trigger: AGGCTTACTAATCATCGTGCTATGCATCATCTTTATACAGGACAATTGTGCCAGCGAGCAGGAGTTGTGGCGTATATTGAATAACATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS CAA 72 bp | TTCAATATACGCCACAACTCCTGCTCGCTGGCACAATaGTCCTGTATAAAGATGATGCATAGCACGATGATT | + |
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Preference number: 6 (lower is better) Translates to: FNIRHNSCSLAQ*SCIKMMHSTMI Trigger: AATCATCGTGCTATGCATCATCTTTATACAGGACAATTGTGCCAGCGAGCAGGAGTTGTGGCGTATATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 72 bp | CGGATGACCATATACAGAATCTCTGCCTTACATGTCTaGTGCTTTCTCCTATACTTAAGGATCAAGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RMTIYRISALHV*CFLLYLRIKKR Trigger: TCTCTTCTTGATCCTTAAGTATAGGAGAAAGCAGCAGACATGTAAGGCAGAGATTCTGTATATGGTCATCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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| CDS GCA 72 bp | ATCCTCATAACCTCGGATGACCATATACAGAATCTCTaGCTTACATGTCTGCTGCTTTCTCCTATACTTAAG | + |
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Preference number: 6 (lower is better) Translates to: ILITSDDHIQNL*LTCLLLSPILK Trigger: CTTAAGTATAGGAGAAAGCAGCAGACATGTAAGGCAGAGATTCTGTATATGGTCATCCGAGGTTATGAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033449.8 ENSMUST00000114866.2 |
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