Pregenerated sensors for MAGEA13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046180Ensembl transcript IDs: ENSMUST00000062542.5, ENSMUST00000118305.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCATGCTGTTTGGAGGCTTaGTTGCTCTCTTTAAACATG | + |
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Preference number: 2 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPCCLEA*LLSLNM Trigger: CATGTTTAAAGAGAGCAATCAAGCCTCCAAACAGCA...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCATCAGTAACAACTGTGTaGGCAGTACAAGGAATGAAT | + |
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Preference number: 2 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPSVTTV*AVQGMN Trigger: ATTCATTCCTTGTACTGCCCACACAGTTGTTACTGA...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACATCAGTAACAACTGTGTaGGCAGTACAAGGAATGAAT | + |
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Preference number: 2 (lower is better) Translates to: SDLPLGLKAENVLNLLLTSVTTV*AVQGMN Trigger: ATTCATTCCTTGTACTGCCCACACAGTTGTTACTGA...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| 3UTR CCA 72 bp | TCTTATTCTGAAACCCAGCAATCAGTAACAACTGTGTaGGCAGTACAAGGAATGAATGGAGTAGACTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: SYSETQQSVTTV*AVQGMNGVDSK Trigger: TTTAGAGTCTACTCCATTCATTCCTTGTACTGCCCACACAGTTGTTACTGATTGCTGGGTTTCAGAATAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTCTGCTGTTTGGAGGCTaGATTGCTCTCTTTAAACAT | + |
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Preference number: 3 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFLLFGG*IALFKH Trigger: ATGTTTAAAGAGAGCAATCAAGCCTCCAAACAGCAG...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATCTGCTGTTTGGAGGCTaGATTGCTCTCTTTAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: CSQFAFNNSKVLILKPSNLLFGG*IALFKH Trigger: ATGTTTAAAGAGAGCAATCAAGCCTCCAAACAGCAG...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTGAGAATGTTCTCAATTaGCTTTTAACAACAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFENVLN*LLTTAR Trigger: CCTTGCTGTTGTTAAAAGCAAATTGAGAACATTCTC...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCAGCCTTTGAGGTACTCTaGCCTCCCTCTGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPAFEVL*PPSASP Trigger: TGGTGAAGCAGAGGGAGGTCAGAGTACCTCAAAGGC...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCACTTGATGCAGACGCTTaGCTGGAAGCAGAGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPLDADA*LEAEDE Trigger: CTCATCCTCTGCTTCCAGCCAAGCGTCTGCATCAAG...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTCCAGGAGGCCGGTCTTaGGTATCCCCTCTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPPGGRS*VSPLHC Trigger: GCAATGAAGAGGGGATACCCAAGACCGGCCTCCTGG...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACAGCCTTTGAGGTACTCTaGCCTCCCTCTGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SDLPLGLKAENVLNLLLTAFEVL*PPSASP Trigger: TGGTGAAGCAGAGGGAGGTCAGAGTACCTCAAAGGC...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTCCACCTTCTCCCAGGTaGCTACCTCTTCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFPPSPR*LPLQLQ Trigger: CTGCAGCTGAAGAGGTAGGCACCTGGGAGAAGGTGG...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTTTCCTGGGAACTCTCTaGAGCAGCCACCTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPFLGTL*SSHLLP Trigger: TGGGAGAAGGTGGCTGCTGCAGAGAGTTCCCAGGAA...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTACTCTGACCTCCCTCTaGTTCACCACCAGAACCCTC | + |
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Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPTLTSL*FTTRTL Trigger: GAGGGTTCTGGTGGTGAAGCAGAGGGAGGTCAGAGT...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATCCAGGAGGCCGGTCTTaGGTATCCCCTCTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNPGGRS*VSPLHC Trigger: GCAATGAAGAGGGGATACCCAAGACCGGCCTCCTGG...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTAGTGGGAGACACTGCTaGGCTTGTCCCCAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFSGRHC*ACPQNL Trigger: CAGGTTCTGGGGACAAGCCCAGCAGTGTCTCCCACT...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTCTCACTTGCTTTGCTTaGTGCAGACGCTTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPLTCFA*CRRLAG Trigger: TCCAGCCAAGCGTCTGCATCAAGCAAAGCAAGTGAG...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATTTCCTGGGAACTCTCTaGAGCAGCCACCTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNFLGTL*SSHLLP Trigger: TGGGAGAAGGTGGCTGCTGCAGAGAGTTCCCAGGAA...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTACTCTGACCTCCCTCTaGTTCACCACCAGAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFTLTSL*FTTRTL Trigger: GAGGGTTCTGGTGGTGAAGCAGAGGGAGGTCAGAGT...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATCTCACTTGCTTTGCTTaGTGCAGACGCTTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNLTCFA*CRRLAG Trigger: TCCAGCCAAGCGTCTGCATCAAGCAAAGCAAGTGAG...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACAAACCCTCACTTGCTTTaGTTGATGCAGACGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SDLPLGLKAENVLNLLLTNPHLL*LMQTLG Trigger: GCCAAGCGTCTGCATCAAGCAAAGCAAGTGAGGGTT...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTCTGGTCCTCAAAGCCTaGATCATGCCTCTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPLVLKA*IMPLNV Trigger: CACATTCAGAGGCATGATCCAGGCTTTGAGGACCAG...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTCTTGATGCAGACGCTTaGCTGGAAGCAGAGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFLDADA*LEAEDE Trigger: CTCATCCTCTGCTTCCAGCCAAGCGTCTGCATCAAG...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATCCTTATACAAAGCGGTaGAGGAAGCTGGGTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNPYTKR*RKLGYS Trigger: GGAGTAACCCAGCTTCCTTCACCGCTTTGTATAAGG...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTCCTTATACAAAGCGGTaGAGGAAGCTGGGTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFPYTKR*RKLGYS Trigger: GGAGTAACCCAGCTTCCTTCACCGCTTTGTATAAGG...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTAACCCTCACTTGCTTTaGTTGATGCAGACGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFNPHLL*LMQTLG Trigger: GCCAAGCGTCTGCATCAAGCAAAGCAAGTGAGGGTT...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTCTGGTCCTCAAAGCCTaGATCATGCCTCTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFLVLKA*IMPLNV Trigger: CACATTCAGAGGCATGATCCAGGCTTTGAGGACCAG...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACATACTCCCAGCAACCTTaGAGAAAAACTGCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: SDLPLGLKAENVLNLLLTYSQQP*RKTAGL Trigger: AAGTCCTGCAGTTTTTCTGCAAGGTTGCTGGGAGTA...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCACAGATAAAATCATGTTaGTCAGGATACACACCAACA | + |
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Preference number: 4 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPQIKSC*SGYTPT Trigger: TGTTGGTGTGTATCCTGACCAACATGATTTTATCTG...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATTACTCCCAGCAACCTTaGAGAAAAACTGCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNYSQQP*RKTAGL Trigger: AAGTCCTGCAGTTTTTCTGCAAGGTTGCTGGGAGTA...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATTCTGAAACTTACTGTTaGGCATTAACTTGGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNSETYC*ALTWCG Trigger: TCCGCACCAAGTTAATGCTCAACAGTAAGTTTCAGA...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTGAATTTCTGCTTCTGTaGCAGGCTCATTTGTTACAT | + |
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Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPEFLLL*QAHLLH Trigger: ATGTAACAAATGAGCCTGTCACAGAAGCAGAAATTC...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTATTCACAGGCATGCTTaGAGATCAATGAATAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPIHRHA*RSMNSS Trigger: GCTACTATTCATTGATCTTCAAGCATGCCTGTGAAT...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTGAATTTCTGCTTCTGTaGCAGGCTCATTTGTTACAT | + |
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Preference number: 4 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFEFLLL*QAHLLH Trigger: ATGTAACAAATGAGCCTGTCACAGAAGCAGAAATTC...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR TCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATATTCACAGGCATGCTTaGAGATCAATGAATAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNIHRHA*RSMNSS Trigger: GCTACTATTCATTGATCTTCAAGCATGCCTGTGAAT...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR GCA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATACTCTTCAGAATTTCTaGTTCTGTGACAGGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: CSQFAFNNSKVLILKPSNTLQNF*FCDRLI Trigger: AATGAGCCTGTCACAGAAGCAGAAATTCTGAAGAGT...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACACATTTGTTACATACTTaGAGCTCAGAAACTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: SDLPLGLKAENVLNLLLTHLLHT*SSETSP Trigger: TGGTGAAGTTTCTGAGCTCCAAGTATGTAACAAATG...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CCA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTCAGATAAAATCATGTTaGTCAGGATACACACCAACA | + |
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Preference number: 4 (lower is better) Translates to: NYSPISKENSVTMLSDLPQIKSC*SGYTPT Trigger: TGTTGGTGTGTATCCTGACCAACATGATTTTATCTG...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CCA 90 bp | CTTGATGCAGACGCTTGGCTGGAAGCAGAGGATGAGGCGGTTTCCTaGGAACTCTCTGCAGCAGCCACCTTCTCCCAGGTGCCTACCTCT | + |
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Preference number: 5 (lower is better) Translates to: LDADAWLEAEDEAVS*ELSAAATFSQVPTS Trigger: AGAGGTAGGCACCTGGGAGAAGGTGGCTGCTGCAGAGAGTTCCCAGGAAACCGCCTCATCCTCTGCTTCCAGCCAAGCGTCTGCATCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS TCA 90 bp | GGGCTCTCTCCTCTTCATCTTCCAGAGCTTCCTTATACAAAGCGGTaGAGGAAGCTGGGTTACTCCCAGCAACCTTGCAGAAAAACTGCA | + |
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Preference number: 5 (lower is better) Translates to: GLSPLHLPELPYTKR*RKLGYSQQPCRKTA Trigger: TGCAGTTTTTCTGCAAGGTTGCTGGGAGTAACCCAGCTTCCTTCACCGCTTTGTATAAGGAAGCTCTGGAAGATGAAGAGGAGAGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCAGAGACACTGCTGGGCTaGTCCCCAGAACCTGAATTG | + |
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Preference number: 5 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPETLLG*SPEPEL Trigger: CAATTCAGGTTCTGGGGACAAGCCCAGCAGTGTCTC...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACATGCGGAGGCAGGCCTTaGAGGTACTCTGACCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: SDLPLGLKAENVLNLLLTCGGRP*RYSDLP Trigger: AGGGAGGTCAGAGTACCTCAAAGGCCTGCCTCCGCA...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACAACCAGGAGGCCGGTCTaGGGTATCCCCTCTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: SDLPLGLKAENVLNLLLTTRRPV*GIPSSL Trigger: CAATGAAGAGGGGATACCCAAGACCGGCCTCCTGGT...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACACCTCACTTGCTTTGCTaGATGCAGACGCTTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SDLPLGLKAENVLNLLLTPHLLC*MQTLGW Trigger: CCAGCCAAGCGTCTGCATCAAGCAAAGCAAGTGAGG...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTCCTCACTTGCTTTGCTaGATGCAGACGCTTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NYSPISKENSVTMLSDLPPHLLC*MQTLGW Trigger: CCAGCCAAGCGTCTGCATCAAGCAAAGCAAGTGAGG...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTACCAGGAGGCCGGTCTaGGGTATCCCCTCTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFTRRPV*GIPSSL Trigger: CAATGAAGAGGGGATACCCAAGACCGGCCTCCTGGT...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | AACTACTCTCCCATTTCTAAGGAAAATTCAGTCACAATGCTATCTGATCTTCCTGAGACACTGCTGGGCTaGTCCCCAGAACCTGAATTG | + |
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Preference number: 5 (lower is better) Translates to: NYSPISKENSVTMLSDLPETLLG*SPEPEL Trigger: CAATTCAGGTTCTGGGGACAAGCCCAGCAGTGTCTC...AGGAAGATCAGATAGCATTGTGACTGAATTTTCCTTAGAAATGGGAGAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CCA 90 bp | TCTTCAGTGATGAACTTTCTGGGATTCCCGCAGATAAAATCATGTTaGTCAGGATACACACCAACAATATTCAGCACCTCCCAGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSVMNFLGFPQIKSC*SGYTPTIFSTSQIF Trigger: GAAGATCTGGGAGGTGCTGAATATTGTTGGTGTGTATCCTGACCAACATGATTTTATCTGCGGGAATCCCAGAAAGTTCATCACTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGGTGCACACCTTAAGTTTCACAATGCAGACTAAGAGAACAGGAATTCCATCATTTGTTACATACTaGGAGCTCAGAAACTTCACC | + |
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Preference number: 5 (lower is better) Translates to: SEVHTLSFTMQTKRTGIPSFVTY*ELRNFT Trigger: GGTGAAGTTTCTGAGCTCCAAGTATGTAACAAATGA...TGGAATTCCTGTTCTCTTAGTCTGCATTGTGAAACTTAAGGTGTGCACCTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | TCTGATCTTCCTCTAGGTCTCAAAGCTGAGAATGTTCTCAATTTGCTTTTAACATTCTCAGAGGCACGGTaGCCTTCCATGAAGATTATA | + |
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Preference number: 5 (lower is better) Translates to: SDLPLGLKAENVLNLLLTFSEAR*PSMKII Trigger: TATAATCTTCATGGAAGGCAACCGTGCCTCTGAGAA...TGTTAAAAGCAAATTGAGAACATTCTCAGCTTTGAGACCTAGAGGAAGATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | ACAATGCAGACTAAGAGAACAGGAATTCCAGTTTTAACCGTATGTTTACACTTTTTACTCCCAGCAACCTaGCAGAAAAACTGCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: TMQTKRTGIPVLTVCLHFLLPAT*QKNCRT Trigger: AGTCCTGCAGTTTTTCTGCAAGGTTGCTGGGAGTAA...AAAGTGTAAACATACGGTTAAAACTGGAATTCCTGTTCTCTTAGTCTGCATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATTTACTCCCAGCAACCTaGCAGAAAAACTGCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: CSQFAFNNSKVLILKPSNLLPAT*QKNCRT Trigger: AGTCCTGCAGTTTTTCTGCAAGGTTGCTGGGAGTAA...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTCAATTTGCTTTTAACAACAGCAAGGTTCTTATTCTGAAACCCAGCAATTCATTTGTTACATACTaGGAGCTCAGAAACTTCACC | + |
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Preference number: 5 (lower is better) Translates to: CSQFAFNNSKVLILKPSNSFVTY*ELRNFT Trigger: GGTGAAGTTTCTGAGCTCCAAGTATGTAACAAATGA...ATTGCTGGGTTTCAGAATAAGAACCTTGCTGTTGTTAAAAGCAAATTGAGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CCA 72 bp | GACGCTTGGCTGGAAGCAGAGGATGAGGCGGTTTCCTaGGAACTCTCTGCAGCAGCCACCTTCTCCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: DAWLEAEDEAVS*ELSAAATFSQV Trigger: CACCTGGGAGAAGGTGGCTGCTGCAGAGAGTTCCCAGGAAACCGCCTCATCCTCTGCTTCCAGCCAAGCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS GCA 72 bp | CCTGGGAACTCTCTGCAGCAGCCACCTTCTCCCAGGTaGCTACCTCTTCAGCTGCAGGAACCTCCTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PGNSLQQPPSPR*LPLQLQEPPPL Trigger: TAGAGGAGGAGGTTCCTGCAGCTGAAGAGGTAGGCACCTGGGAGAAGGTGGCTGCTGCAGAGAGTTCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CAA 72 bp | TCTGACCTCCCTCTGCTTCACCACCAGAACCCTCACTaGCTTTGCTTGATGCAGACGCTTGGCTGGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SDLPLLHHQNPH*LCLMQTLGWKQ Trigger: CTGCTTCCAGCCAAGCGTCTGCATCAAGCAAAGCAAGTGAGGGTTCTGGTGGTGAAGCAGAGGGAGGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CCA 72 bp | AACCCTCACTTGCTTTGCTTGATGCAGACGCTTGGCTaGAAGCAGAGGATGAGGCGGTTTCCTGGGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: NPHLLCLMQTLG*KQRMRRFPGNS Trigger: AGAGTTCCCAGGAAACCGCCTCATCCTCTGCTTCCAGCCAAGCGTCTGCATCAAGCAAAGCAAGTGAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS TCA 72 bp | TGCCACAGACCACTTCCAAGCATTCACAGGCATGCTTaGAGATCAATGAATAGTAGCCCTTGTGCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CHRPLPSIHRHA*RSMNSSPCASS Trigger: GGAAGAAGCACAAGGGCTACTATTCATTGATCTTCAAGCATGCCTGTGAATGCTTGGAAGTGGTCTGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS TCA 72 bp | CACTTCCAAGCATTCACAGGCATGCTTGAAGATCAATaGATAGTAGCCCTTGTGCTTCTTCCCAACACTCTT | + |
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Preference number: 6 (lower is better) Translates to: HFQAFTGMLEDQ*IVALVLLPNTL Trigger: AAGAGTGTTGGGAAGAAGCACAAGGGCTACTATTCATTGATCTTCAAGCATGCCTGTGAATGCTTGGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS GCA 72 bp | GCCCTTGTGCTTCTTCCCAACACTCTTCAGAATTTCTaGTTCTGTGACAGGCTCATTTGTTACATACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ALVLLPNTLQNF*FCDRLICYILG Trigger: TCCAAGTATGTAACAAATGAGCCTGTCACAGAAGCAGAAATTCTGAAGAGTGTTGGGAAGAAGCACAAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CCA 72 bp | ATGAACTTTCTGGGATTCCCGCAGATAAAATCATGTTaGTCAGGATACACACCAACAATATTCAGCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: MNFLGFPQIKSC*SGYTPTIFSTS Trigger: GGAGGTGCTGAATATTGTTGGTGTGTATCCTGACCAACATGATTTTATCTGCGGGAATCCCAGAAAGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CAA 72 bp | GATGAACTTTCTGGGATTCCCGCAGATAAAATCATGTaGGTCAGGATACACACCAACAATATTCAGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: DELSGIPADKIM*VRIHTNNIQHL Trigger: GAGGTGCTGAATATTGTTGGTGTGTATCCTGACCAACATGATTTTATCTGCGGGAATCCCAGAAAGTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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| CDS CAA 90 bp | ATCTTCAGTGATGAACTTTCTGGGATTCCCGCAGATAAAATCATGTaGGTCAGGATACACACCAACAATATTCAGCACCTCCCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: IFSDELSGIPADKIM*VRIHTNNIQHLPDL Trigger: AAGATCTGGGAGGTGCTGAATATTGTTGGTGTGTATCCTGACCAACATGATTTTATCTGCGGGAATCCCAGAAAGTTCATCACTGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062542.5 ENSMUST00000118305.8 |
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