Pregenerated sensors for MAGEA10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043453Ensembl transcript IDs: ENSMUST00000088481.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCCTCCCACCAGATCTAGATTGAGGGTCCACTGCTTAGTTCACTaGGTCTATGTAACTTTATCAGAATTGGGAACTGTAAGTGCACTA | + |
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Preference number: 1 (lower is better) Translates to: CPPTRSRLRVHCLVH*VYVTLSELGTVSAL Trigger: TAGTGCACTTACAGTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACTAAGCAGTGGACCCTCAATCTAGATCTGGTGGGAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR GCA 90 bp | AGTTCACTGAGTCTATGTAACTTTATCAGAATTGGGAACTGTAAGTaGACTATCATGTGTGCTGCTCAGAGCAGTAGTATCAGGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SSLSLCNFIRIGNCK*TIMCAAQSSSIRGQ Trigger: CTGACCCCTGATACTACTGCTCTGAGCAGCACACATGATAGTGCACTTACAGTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR CCA 90 bp | ATCCAGTTCTTCCTCATAGCCAAGGAAATACTAATCCCAACACCATaGTGTCTTGTGACAGATTGCAGATCAGATGGAAAACATCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: IQFFLIAKEILIPTP*CLVTDCRSDGKHPN Trigger: GTTGGGATGTTTTCCATCTGATCTGCAATCTGTCACAAGACACCATGGTGTTGGGATTAGTATTTCCTTGGCTATGAGGAAGAACTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCTCCCACGTAACTTTATCAGAATaGGGAACTGTAAGTGCACTA | + |
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Preference number: 3 (lower is better) Translates to: LSHSNRTARVGWLILSSHVTLSE*GTVSAL Trigger: TAGTGCACTTACAGTTCCCAATTCTGATAAAGTTAC...GTGGGAGGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR CCA 72 bp | TTCCTCATAGCCAAGGAAATACTAATCCCAACACCATaGTGTCTTGTGACAGATTGCAGATCAGATGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: FLIAKEILIPTP*CLVTDCRSDGK Trigger: TTTTCCATCTGATCTGCAATCTGTCACAAGACACCATGGTGTTGGGATTAGTATTTCCTTGGCTATGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR TCA 72 bp | ACCAGATCTAGATTGAGGGTCCACTGCTTAGTTCACTaGGTCTATGTAACTTTATCAGAATTGGGAACTGTA | + |
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Preference number: 3 (lower is better) Translates to: TRSRLRVHCLVH*VYVTLSELGTV Trigger: TACAGTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACTAAGCAGTGGACCCTCAATCTAGATCTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR GCA 72 bp | AGTCTATGTAACTTTATCAGAATTGGGAACTGTAAGTaGACTATCATGTGTGCTGCTCAGAGCAGTAGTATC | + |
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Preference number: 3 (lower is better) Translates to: SLCNFIRIGNCK*TIMCAAQSSSI Trigger: GATACTACTGCTCTGAGCAGCACACATGATAGTGCACTTACAGTTCCCAATTCTGATAAAGTTACATAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR CCA 72 bp | TGGATAAACAACAGTAAGTGCATGACTAATACAAACTaGAAGCTTAAAACCCAGCCTAATGAGCCTTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: WINNSKCMTNTN*KLKTQPNEPSR Trigger: TCTAGAAGGCTCATTAGGCTGGGTTTTAAGCTTCCAGTTTGTATTAGTCATGCACTTACTGTTGTTTATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR TCA 90 bp | GGAAAAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTACATGGCAGGGCCTGTaGGGAGCCTGGACTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKIPESLKQNSESGVAHTTWQGL*GAWTVL Trigger: GAGGACAGTCCAGGCTCCTCACAGGCCCTGCCATGT...AGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CCA 90 bp | CTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCTCCCACACTGACCTGGCTACGTaGAGAGGAAATCATAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LSHSNRTARVGWLILSSHTDLAT*RGNHSS Trigger: ACTGCTATGATTTCCTCTCCACGTAGCCAGGTCAGT...GTGGGAGGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR GCA 90 bp | AAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCTTGCTGCCAGGCACATaGCTGTATTCCAGGTACCCT | + |
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Preference number: 4 (lower is better) Translates to: KFLSHSNRTARVGWLILSLLPGT*LYSRYP Trigger: AGGGTACCTGGAATACAGGCATGTGCCTGGCAGCAA...GGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR TCA 90 bp | AAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCAGGACTATGAGGACTTaGTGCTCTAGAAGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KFLSHSNRTARVGWLILSRTMRT*CSRSST Trigger: TGTGCTGCTTCTAGAGCATCAAGTCCTCATAGTCCT...GGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR TCA 90 bp | AAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCATACCACACTGGAAATaGTCTAGGATCACTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: KFLSHSNRTARVGWLILSIPHWK*SRITPI Trigger: AATGGGAGTGATCCTAGATCATTTCCAGTGTGGTAT...GGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR GCA 90 bp | GGAAAAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTTTGCTGACTGGCTCCTaGATAAGATACTTAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GKIPESLKQNSESGVAHTLLTGS*IRYLRS Trigger: GCTCCTTAAGTATCTTATGCAGGAGCCAGTCAGCAA...AGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CCA 90 bp | GAGGGTCCACTGCTTAGTTCACTGAGTCTATGTAACTTTATCAGAATTGGGAACGTAACTGCAACACTTTaGGCCTCAGGCTGTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: EGPLLSSLSLCNFIRIGNVTATL*ASGCPS Trigger: TGAGGGACAGCCTGAGGCCCAAAGTGTTGCAGTTAC...GTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACTAAGCAGTGGACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR TCA 90 bp | AAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCATAAGTAGAAGAGGATaGGGAGGAATCTTCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KFLSHSNRTARVGWLILSISRRG*GGIFFH Trigger: ATGGAAGAAGATTCCTCCTCATCCTCTTCTACTTAT...GGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR GCA 90 bp | AAATTCCTGAGTCACTCAAACAGAACAGCGAGAGTGGGGTGGCTCATACTGTCCCAAAGACTAATTGCATaGACTCTAAGGCTTCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: KFLSHSNRTARVGWLILSQRLIA*TLRLLE Trigger: TTCGAGAAGCCTTAGAGTGCATGCAATTAGTCTTTG...GGACAGTATGAGCCACCCCACTCTCGCTGTTCTGTTTGAGTGACTCAGGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTCCACTGCTTAGTTCACTGAGTCTATGTAACTTTATCAGAATTGGGAACGGCCTGTCTTTGGTATaGCCTGAACATCAGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: EGPLLSSLSLCNFIRIGNGLSLV*PEHQSS Trigger: TGATGACTGATGTTCAGGGCATACCAAAGACAGGCC...GTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACTAAGCAGTGGACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CCA 90 bp | AACAGTAAGTGCATGACTAATACAAACTGGAAGCTTAAAACCCAGCCTAATGAGGAGTCTGCACTGACCTaGCTACGTGGAGAGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: NSKCMTNTNWKLKTQPNEESALT*LRGEEI Trigger: GATTTCCTCTCCACGTAGCCAGGTCAGTGCAGACTC...CTCATTAGGCTGGGTTTTAAGCTTCCAGTTTGTATTAGTCATGCACTTACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR TCA 90 bp | TGTAACTTTATCAGAATTGGGAACTGTAAGTGCACTATCATGTGTGCTGCTCAGTTATGCTCAGTACCATaGTCAGAAGGCCTGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: CNFIRIGNCKCTIMCAAQLCSVP*SEGLSL Trigger: CAAAGACAGGCCTTCTGATCATGGTACTGAGCATAA...CTGAGCAGCACACATGATAGTGCACTTACAGTTCCCAATTCTGATAAAGTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR GCA 90 bp | AACAGTAAGTGCATGACTAATACAAACTGGAAGCTTAAAACCCAGCCTAATGAGATTACTCAGGATTTCTaGCTTGCTGACTGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NSKCMTNTNWKLKTQPNEITQDF*LADWLL Trigger: CAGGAGCCAGTCAGCAAGGCAGAAATCCTGAGTAAT...CTCATTAGGCTGGGTTTTAAGCTTCCAGTTTGTATTAGTCATGCACTTACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR GCA 90 bp | CTAATACAAACTGGAAGCTTAAAACCCAGCCTAATGAGCCTTCTAGAAAATGTAAGAAAGGAGGGTTGCTaGCAGGCACATGCCTGTATT | + |
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Preference number: 4 (lower is better) Translates to: LIQTGSLKPSLMSLLENVRKEGC*QAHACI Trigger: AATACAGGCATGTGCCTGGCAGCAACCCTCCTTTCT...TACATTTTCTAGAAGGCTCATTAGGCTGGGTTTTAAGCTTCCAGTTTGTATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CCA 90 bp | CATTTTAGAATACTAAGAGGAAAAATTCCTGAGTCACTCAAACAGAACAGCGAGTTCTGCCTTGCTGACTaGCTCCTGCATAAGATACTT | + |
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Preference number: 4 (lower is better) Translates to: HFRILRGKIPESLKQNSEFCLAD*LLHKIL Trigger: AAGTATCTTATGCAGGAGCCAGTCAGCAAGGCAGAA...CTCGCTGTTCTGTTTGAGTGACTCAGGAATTTTTCCTCTTAGTATTCTAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| 3UTR CAA 72 bp | AATACTAATCCCAACACCATGGTGTCTTGTGACAGATaGCAGATCAGATGGAAAACATCCCAACTTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: NTNPNTMVSCDR*QIRWKTSQLVL Trigger: TAAAACAAGTTGGGATGTTTTCCATCTGATCTGCAATCTGTCACAAGACACCATGGTGTTGGGATTAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CCA 90 bp | GCCTGGACTGTCCTCACCTTCAGAGTCTGCACTGACCTGGCTACGTaGAGAGGAAATCATAGCAGTGCAGGAGGAGCCAGCTCCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AWTVLTFRVCTDLAT*RGNHSSAGGASSWR Trigger: CCTCCAGGAGCTGGCTCCTCCTGCACTGCTATGATTTCCTCTCCACGTAGCCAGGTCAGTGCAGACTCTGAAGGTGAGGACAGTCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CCA 90 bp | TGTGAGGAGCCTGGACTGTCCTCACCTTCAGAGTCTGCACTGACCTaGCTACGTGGAGAGGAAATCATAGCAGTGCAGGAGGAGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CEEPGLSSPSESALT*LRGEEIIAVQEEPA Trigger: AGCTGGCTCCTCCTGCACTGCTATGATTTCCTCTCCACGTAGCCAGGTCAGTGCAGACTCTGAAGGTGAGGACAGTCCAGGCTCCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS TCA 90 bp | GAGGAAATCATAGCAGTGCAGGAGGAGCCAGCTCCTGGAGGACTATaGGGACTTGATGCTCTAGAAGCAGCACAGCCCTCCTCTGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: EEIIAVQEEPAPGGL*GLDALEAAQPSSEL Trigger: CAACTCAGAGGAGGGCTGTGCTGCTTCTAGAGCATCAAGTCCTCATAGTCCTCCAGGAGCTGGCTCCTCCTGCACTGCTATGATTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CCA 90 bp | GAAGAGGATGAGGAGGAATCTTCTTCCATTGTAACTGCAACACTTTaGGCCTCAGGCTGTCCCTCAACCATACATCTCCTACGCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: EEDEEESSSIVTATL*ASGCPSTIHLLRFR Trigger: CCGGAAGCGTAGGAGATGTATGGTTGAGGGACAGCCTGAGGCCCAAAGTGTTGCAGTTACAATGGAAGAAGATTCCTCCTCATCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CAA 90 bp | GAGGGTCCACTGCTTAGTTCACTGAGTCTATGTAACTTTATCAGAATTGGGAACCTCAGGATTTCTGCCTaGCTGACTGGCTCCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: EGPLLSSLSLCNFIRIGNLRISA*LTGSCI Trigger: TATGCAGGAGCCAGTCAGCAAGGCAGAAATCCTGAG...GTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACTAAGCAGTGGACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CAA 90 bp | AACAGTAAGTGCATGACTAATACAAACTGGAAGCTTAAAACCCAGCCTAATGAGTGTAACTGCAACACTTaGGGCCTCAGGCTGTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: NSKCMTNTNWKLKTQPNECNCNT*GLRLSL Trigger: GAGGGACAGCCTGAGGCCCAAAGTGTTGCAGTTACA...CTCATTAGGCTGGGTTTTAAGCTTCCAGTTTGTATTAGTCATGCACTTACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CAA 90 bp | ACTGGAAGCTTAAAACCCAGCCTAATGAGCCTTCTAGAAAATGTAGCAACATTTCTAGGATCACTCCCATaGATGCTGGTCAAAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: TGSLKPSLMSLLENVATFLGSLP*MLVKKV Trigger: GACCTTTTTGACCAGCATCAATGGGAGTGATCCTAG...AAATGTTGCTACATTTTCTAGAAGGCTCATTAGGCTGGGTTTTAAGCTTCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS GCA 90 bp | TGGCTAGCAGGATCTATTTCCTTTAATTCAAGGCCAAAGACTAATTaGATGCACTCTAAGGCTTCTCGAAATATAACAGCAAAGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: WLAGSISFNSRPKTN*MHSKASRNITAKWS Trigger: GGACCACTTTGCTGTTATATTTCGAGAAGCCTTAGAGTGCATGCAATTAGTCTTTGGCCTTGAATTAAAGGAAATAGATCCTGCTAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CAA 90 bp | ACTGGAAGCTTAAAACCCAGCCTAATGAGCCTTCTAGAAAATGTAGCAACATTTTCCTCACTGACACAGTaGCCTTCCATGAATATTATG | + |
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Preference number: 5 (lower is better) Translates to: TGSLKPSLMSLLENVATFSSLTQ*PSMNIM Trigger: CATAATATTCATGGAAGGCAACTGTGTCAGTGAGGA...AAATGTTGCTACATTTTCTAGAAGGCTCATTAGGCTGGGTTTTAAGCTTCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS-3UTR CAA 90 bp | GAGGGTCCACTGCTTAGTTCACTGAGTCTATGTAACTTTATCAGAATTGGGAACTTCCAGGTACCCTTCTaGTACAAAATTATCAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: EGPLLSSLSLCNFIRIGNFQVPF*YKIISD Trigger: ATCACTGATAATTTTGTACAAGAAGGGTACCTGGAA...GTTCCCAATTCTGATAAAGTTACATAGACTCAGTGAACTAAGCAGTGGACCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS TCA 72 bp | ATAGCAGTGCAGGAGGAGCCAGCTCCTGGAGGACTATaGGGACTTGATGCTCTAGAAGCAGCACAGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: IAVQEEPAPGGL*GLDALEAAQPS Trigger: GGAGGGCTGTGCTGCTTCTAGAGCATCAAGTCCTCATAGTCCTCCAGGAGCTGGCTCCTCCTGCACTGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CCA 72 bp | GTCCTCACCTTCAGAGTCTGCACTGACCTGGCTACGTaGAGAGGAAATCATAGCAGTGCAGGAGGAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLTFRVCTDLAT*RGNHSSAGGAS Trigger: GCTGGCTCCTCCTGCACTGCTATGATTTCCTCTCCACGTAGCCAGGTCAGTGCAGACTCTGAAGGTGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CCA 72 bp | GAGGAGGAATCTTCTTCCATTGTAACTGCAACACTTTaGGCCTCAGGCTGTCCCTCAACCATACATCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: EEESSSIVTATL*ASGCPSTIHLL Trigger: TAGGAGATGTATGGTTGAGGGACAGCCTGAGGCCCAAAGTGTTGCAGTTACAATGGAAGAAGATTCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CAA 72 bp | GCATACCACACTGGAAATGATCTAGGATCACTCCCATaGATGCTGGTCAAAAAGGTCAAGATTTTCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: AYHTGNDLGSLP*MLVKKVKIFIL Trigger: CAAGATGAAAATCTTGACCTTTTTGACCAGCATCAATGGGAGTGATCCTAGATCATTTCCAGTGTGGTATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS GCA 72 bp | GTCCTGATAATTTCTAATGATATTACTCAGGATTTCTaGCTTGCTGACTGGCTCCTGCATAAGATACTTAAG | + |
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Preference number: 6 (lower is better) Translates to: VLIISNDITQDF*LADWLLHKILK Trigger: CTTAAGTATCTTATGCAGGAGCCAGTCAGCAAGGCAGAAATCCTGAGTAATATCATTAGAAATTATCAGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS GCA 72 bp | GGATCTATTTCCTTTAATTCAAGGCCAAAGACTAATTaGATGCACTCTAAGGCTTCTCGAAATATAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSISFNSRPKTN*MHSKASRNITA Trigger: TGCTGTTATATTTCGAGAAGCCTTAGAGTGCATGCAATTAGTCTTTGGCCTTGAATTAAAGGAAATAGATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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| CDS CAA 72 bp | TACTTAAGGAGCAGATATTTTACCAACTCGTCTACTTaGACATCTATCTCACCTGTAGACAATGAAGTACCA | + |
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Preference number: 6 (lower is better) Translates to: YLRSRYFTNSST*TSISPVDNEVP Trigger: TGGTACTTCATTGTCTACAGGTGAGATAGATGTCAAAGTAGACGAGTTGGTAAAATATCTGCTCCTTAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088481.5 |
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