Pregenerated sensors for MAFK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018143Ensembl transcript IDs: ENSMUST00000018287.10, ENSMUST00000110836.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCCATGGGGCGCACTCACACCCTTCCCAGCCCCTCCAGGCAGGTaGCCTGCACGGGTGCTCCGGGTAGCACTGACAGCCCTGTCTACC | + |
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Preference number: 1 (lower is better) Translates to: VPWGALTPFPAPPGR*PARVLRVALTALST Trigger: GGTAGACAGGGCTGTCAGTGCTACCCGGAGCACCCGTGCAGGGCACCTGCCTGGAGGGGCTGGGAAGGGTGTGAGTGCGCCCCATGGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | ATGGGGCGCACTCACACCCTTCCCAGCCCCTCCAGGCAGGTGCCCTaGACGGGTGCTCCGGGTAGCACTGACAGCCCTGTCTACCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: MGRTHTLPSPSRQVP*TGAPGSTDSPVYPG Trigger: TCCAGGGTAGACAGGGCTGTCAGTGCTACCCGGAGCACCCGTGCAGGGCACCTGCCTGGAGGGGCTGGGAAGGGTGTGAGTGCGCCCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CCA 90 bp | GTTCACAGTGGGCAGGTAGACATGAGGAATCTGTGCCAGGGAGCCTaGGATAGGCATGAGGGCTGTGCCACTGCCCGCACCCTGCCCGGC | + |
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Preference number: 1 (lower is better) Translates to: VHSGQVDMRNLCQGA*DRHEGCATARTLPG Trigger: GCCGGGCAGGGTGCGGGCAGTGGCACAGCCCTCATGCCTATCCCAGGCTCCCTGGCACAGATTCCTCATGTCTACCTGCCCACTGTGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | CACTGGCTCCTGAGAGCTTCCCTTTTATCCTGCATCTGCTGTCCCTaGTGTTCCTGCTGTCCCTGCCCTCAGCCCCGCAGGGTTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: HWLLRASLLSCICCP*CSCCPCPQPRRVHS Trigger: ACTGTGAACCCTGCGGGGCTGAGGGCAGGGACAGCAGGAACAGCAGGGACAGCAGATGCAGGATAAAAGGGAAGCTCTCAGGAGCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CCA 90 bp | AAGAATATGGAGCCTCCGCCCAGGAAGACCACCACAGGCCAGGCGTaGGCAGCAAGCCACAGTCAGTGGTCATCTGCCTACCACTGTACT | + |
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Preference number: 1 (lower is better) Translates to: KNMEPPPRKTTTGQA*AASHSQWSSAYHCT Trigger: AGTACAGTGGTAGGCAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCCTGGGCGGAGGCTCCATATTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR TCA 90 bp | GGCTTCACCAGTGGCCCAGCATGCCCAGTGCCACCACAGAAAAGATaGCAGTCAGTGGTCATCTGCCTACCACTGTACTCATCCAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: GFTSGPACPVPPQKR*QSVVICLPLYSSSV Trigger: CACGCTGGATGAGTACAGTGGTAGGCAGATGACCACTGACTGTCATCTTTTCTGTGGTGGCACTGGGCATGCTGGGCCACTGGTGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CCA 90 bp | CTCTGTCCCTTAATACTATGCCTCTCAGGCCTCTTCCACATCCCCTaGACCTCGACTGCCAGGACTCCGCACTATCCCTGTCTACTTCGT | + |
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Preference number: 1 (lower is better) Translates to: LCPLILCLSGLFHIP*TSTARTPHYPCLLR Trigger: ACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGGTCCAGGGGATGTGGAAGAGGCCTGAGAGGCATAGTATTAAGGGACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CCA 90 bp | ACTGTACTCATCCAGTGTGACACGTGCTGGAGCAGGCTTCACCAGTaGCCCAGCATGCCCAGTGCCACCACAGAAAAGATGACAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: TVLIQCDTCWSRLHQ*PSMPSATTEKMTVS Trigger: ACTGACTGTCATCTTTTCTGTGGTGGCACTGGGCATGCTGGGCCACTGGTGAAGCCTGCTCCAGCACGTGTCACACTGGATGAGTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR TCA 90 bp | CAAGGCTATGGTTCCAACAGTGCTTGCTTTCTAAGTGCCTGGCTGTaGCTCAGCCTGCCCCTGACTCCCTGTCTACCATATTCCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: QGYGSNSACFLSAWL*LSLPLTPCLPYSPG Trigger: TCCTGGGGAATATGGTAGACAGGGAGTCAGGGGCAGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | TGTCTACTTCGTTCCTGTTCTTTTTGCAGCAACACACGTCTCACCTaGCAGCGACATCTCTCAGCACCTCTCAGGCTTCACCTGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: CLLRSCSFCSNTRLT*QRHLSAPLRLHLLL Trigger: GAGGAGCAGGTGAAGCCTGAGAGGTGCTGAGAGATGTCGCTGGCAGGTGAGACGTGTGTTGCTGCAAAAAGAACAGGAACGAAGTAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | AATACTATGCCTCTCAGGCCTCTTCCACATCCCCTGGACCTCGACTaGCAGGACTCCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: NTMPLRPLPHPLDLD*QDSALSLSTSFLFF Trigger: AAAGAACAGGAACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGGTCCAGGGGATGTGGAAGAGGCCTGAGAGGCATAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | GATTACCTACCAAGGCTATGGTTCCAACAGTGCTTGCTTTCTAAGTaGCTGGCTGTGACTCAGCCTGCCCCTGACTCCCTGTCTACCATA | + |
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Preference number: 1 (lower is better) Translates to: DYLPRLWFQQCLLSK*LAVTQPAPDSLSTI Trigger: TATGGTAGACAGGGAGTCAGGGGCAGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | AATGTCCATATATTAAATTGTGACAATGAAATTTCAGTGACACAGTaGCATGGGGCGCACTCACACCCTTCCCAGCCCCTCCAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: NVHILNCDNEISVTQ*HGAHSHPSQPLQAG Trigger: ACCTGCCTGGAGGGGCTGGGAAGGGTGTGAGTGCGCCCCATGGCACTGTGTCACTGAAATTTCATTGTCACAATTTAATATATGGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR GCA 90 bp | GAAATGAAATTGCCAAGTGGCAGGTGGCTGAGGATGCCAGGTCTCTaGGTGGTCAGCATGTGTCCCTGTCACCTTTTGAAAAAGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: EMKLPSGRWLRMPGL*VVSMCPCHLLKKLK Trigger: CTTTAACTTTTTCAAAAGGTGACAGGGACACATGCTGACCACGCAGAGACCTGGCATCCTCAGCCACCTGCCACTTGGCAATTTCATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
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| 3UTR CCA 90 bp | CCATGGTCCTTATTGATATCCAATATGGATTACCTACCAAGGCTATaGTTCCAACAGTGCTTGCTTTCTAAGTGCCTGGCTGTGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: PWSLLISNMDYLPRL*FQQCLLSKCLAVTQ Trigger: CTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATCCATATTGGATATCAATAAGGACCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGCCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTGGCACCCTGGGCCCAGCCTGGCTGTTTaGTGGCTCTGTGGACAGGCG | + |
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Preference number: 2 (lower is better) Translates to: QLPSATAGKTEEGCWHPGPSLAV*WLCGQA Trigger: CGCCTGTCCACAGAGCCAGCAAACAGCCAGGCTGGG...CCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGGCAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTGGGTGTCTACCCCAGCTaGAGGCCCTTAGAGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: GRPPQARRGQQATVSGHLGVYPS*RPLEGT Trigger: CGTCCCCTCTAAGGGCCTCCAGCTGGGGTAGACACC...CAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTGCCTACAGCAGGCTTCACCAGTaGCCCAGCATGCCCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TTTGQAWAASHSQWSSAYSRLHQ*PSMPSA Trigger: GGCACTGGGCATGCTGGGCCACTGGTGAAGCCTGCT...GTAGGCAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTGGCACCCTGGGCCTTCGCTCTCAGGCTTCACCTaGTCCTCTCTCTCTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PSATAGKTEEGCWHPGPSLSGFT*SSLSLP Trigger: GGGGAGAGAGAGAGAGGAGCAGGTGAAGCCTGAGAG...CGAAGGCCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCTACCATGGGTGTGTCCACAAGGCCCTCCGGACTCAGTCTCTGTCCCTAGCCTGGCTGTTTGCTaGCTCTGTGGACAGGCGGCC | + |
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Preference number: 2 (lower is better) Translates to: TCLPWVCPQGPPDSVSVPSLAVC*LCGQAA Trigger: GGCCGCCTGTCCACAGAGCCAGCAAACAGCCAGGCT...AGGGACAGAGACTGAGTCCGGAGGGCCTTGTGGACACACCCATGGTAGGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTGGCACCCTGGGCCTTCGTTCCCCACCCCACCGTCCAACCTACTCTGCACAGAGAACCCCAGCCTaGCTGTTTGCTGGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: AVGTLGLRSPPHRPTYSAQRTPA*LFAGSV Trigger: CACAGAGCCAGCAAACAGCCAGGCTGGGGTTCTCTG...TGCAGAGTAGGTTGGACGGTGGGGTGGGGAACGAAGGCCCAGGGTGCCAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGCCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTGGCACCCTGGGGGCCCCAGAGCTCTATaGAGGAGGAAAAGGCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: QLPSATAGKTEEGCWHPGGPRAL*RRKRLR Trigger: CCTAAGCCTTTTCCTCCTTCATAGAGCTCTGGGGCC...CCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGGCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTGGCACCCTGGGCCTTCGTTCCCCACCCCACCGTCCAACCTACTCTGCAGATTTGAGAGGGCGTTaGTTGAGGCACTGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AVGTLGLRSPPHRPTYSADLRGR*LRHWLL Trigger: CAGGAGCCAGTGCCTCAAGCAACGCCCTCTCAAATC...TGCAGAGTAGGTTGGACGGTGGGGTGGGGAACGAAGGCCCAGGGTGCCAACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTGACTCCCTGTCTACCATATTCCCCAGGACCTGGAGGACACGATTCCTTTGTTCCTGCTGTCCCTaGCCTCAGCCCCGCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: APDSLSTIFPRTWRTRFLCSCCP*PQPRRV Trigger: AACCCTGCGGGGCTGAGGGCAGGGACAGCAGGAACA...AAGGAATCGTGTCCTCCAGGTCCTGGGGAATATGGTAGACAGGGAGTCAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCTCCGGACTCAGTCTCTGTCCCTTAATACTATGCCTCTCAGGCCTCTTCTGTTCCTGCTGTCCCTaGCCTCAGCCCCGCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RPSGLSLCPLILCLSGLFCSCCP*PQPRRV Trigger: AACCCTGCGGGGCTGAGGGCAGGGACAGCAGGAACA...GAAGAGGCCTGAGAGGCATAGTATTAAGGGACAGAGACTGAGTCCGGAGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCTCCGGACTCAGTCTCTGTCCCTTAATACTATGCCTCTCAGGCCTCTTCCCCAGCCTGGCTGTTTaGTGGCTCTGTGGACAGGCG | + |
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Preference number: 2 (lower is better) Translates to: RPSGLSLCPLILCLSGLFPSLAV*WLCGQA Trigger: CGCCTGTCCACAGAGCCAGCAAACAGCCAGGCTGGG...GAAGAGGCCTGAGAGGCATAGTATTAAGGGACAGAGACTGAGTCCGGAGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTGGCACCCTGGGCCTTCGATATTCCCCAGGACCTaGAGGACACGATTCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PSATAGKTEEGCWHPGPSIFPRT*RTRFLQ Trigger: CTGAAGGAATCGTGTCCTCCAGGTCCTGGGGAATAT...CGAAGGCCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | ACATTCATGCAACCCTCGGCGCACATACTGGACAGGCTCTCCCATGTGGCCACCCCGCAGGGTTCACAGTaGGCAGGTAGACATGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TFMQPSAHILDRLSHVATPQGSQ*AGRHEE Trigger: TTCCTCATGTCTACCTGCCCACTGTGAACCCTGCGG...GGTGGCCACATGGGAGAGCCTGTCCAGTATGTGCGCCGAGGGTTGCATGAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTTCTTTTTGCAGCAACACACGTCTCACCTGCCAGCGACATCTCTCAGCATGTCCCTGCTGTTCCTaGTGTCCCTGCCCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SCSFCSNTRLTCQRHLSACPCCS*CPCPQP Trigger: GGGCTGAGGGCAGGGACAGCAGGAACAGCAGGGACA...TGCTGAGAGATGTCGCTGGCAGGTGAGACGTGTGTTGCTGCAAAAAGAACAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGCCCCTGACTCCCTGTCTACCATATTCCCCAGGACCTGGAGGACACGACTTTTATCCTGCATCTaGTGTCCCTGCTGTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QPAPDSLSTIFPRTWRTRLLSCI*CPCCSC Trigger: GCAGGAACAGCAGGGACAGCAGATGCAGGATAAAAG...TCGTGTCCTCCAGGTCCTGGGGAATATGGTAGACAGGGAGTCAGGGGCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CAA 90 bp | ACCAAAGATGCAGAGTATTTGCAACTTACAGTCTGCCTGGGGTCCTaGCTGACCTGCCTACCATGGGTGTGTCCACAAGGCCCTCCGGAC | + |
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Preference number: 2 (lower is better) Translates to: TKDAEYLQLTVCLGS*LTCLPWVCPQGPPD Trigger: GTCCGGAGGGCCTTGTGGACACACCCATGGTAGGCAGGTCAGCAAGGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CATTCATGCAACCCTCGGCGCACATACTGGACAGGCTCTCCCATGTGGCCACCTCTTTTATCCTGCATCTaGTGTCCCTGCTGTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: HSCNPRRTYWTGSPMWPPLLSCI*CPCCSC Trigger: GCAGGAACAGCAGGGACAGCAGATGCAGGATAAAAG...AGGTGGCCACATGGGAGAGCCTGTCCAGTATGTGCGCCGAGGGTTGCATGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCACCAAAGATGCAGAGTATTTGCAACTTACAGTCTGCCTGGGGTCCTTGGTGTCTACCCCAGCTaGAGGCCCTTAGAGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: SGHQRCRVFATYSLPGVLGVYPS*RPLEGT Trigger: CGTCCCCTCTAAGGGCCTCCAGCTGGGGTAGACACC...AAGGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTTGGTGCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTTTTGCAGCAACACACGTGTTTGCTGGCTCTGTaGACAGGCGGCCCCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: DSALSLSTSFLFFLQQHTCLLAL*TGGPCS Trigger: GCTGCAGGGGCCGCCTGTCCACAGAGCCAGCAAACA...CGTGTGTTGCTGCAAAAAGAACAGGAACGAAGTAGACAGGGATAGTGCGGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CGGACTCAGTCTCTGTCCCTTAATACTATGCCTCTCAGGCCTCTTCCACATCCCGATTTGAGAGGGCGTTaGTTGAGGCACTGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTQSLSLNTMPLRPLPHPDLRGR*LRHWLL Trigger: CAGGAGCCAGTGCCTCAAGCAACGCCCTCTCAAATC...GGGATGTGGAAGAGGCCTGAGAGGCATAGTATTAAGGGACAGAGACTGAGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCGACTGCCAGGACTCCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTTTTCTCTCAGGCTTCACCTaGTCCTCTCTCTCTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PRLPGLRTIPVYFVPVLFLSGFT*SSLSLP Trigger: GGGGAGAGAGAGAGAGGAGCAGGTGAAGCCTGAGAG...AAAAAGAACAGGAACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGCTTCACCAGTGACCCAGCTGCCCAGTGCCACCGCAGGAAAGACTGAGAAGATGCAGAGTATTTaGAACTTACAGTCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EQASPVTQLPSATAGKTEKMQSI*NLQSAW Trigger: CCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTT...CTCAGTCTTTCCTGCGGTGGCACTGGGCAGCTGGGTCACTGGTGAAGCCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCGACTGCCAGGACTCCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTTTTCAGAGAACCCCAGCCTaGCTGTTTGCTGGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PRLPGLRTIPVYFVPVLFQRTPA*LFAGSV Trigger: CACAGAGCCAGCAAACAGCCAGGCTGGGGTTCTCTG...AAAAAGAACAGGAACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGGGCACCAAAGATGCAGAGTATTTGCAACTTACAGTCTGCCTGGGGTCCGACATGAGGAATCTGTaGCAGGGAGCCTGGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: QVGTKDAEYLQLTVCLGSDMRNL*QGAWDR Trigger: CCTATCCCAGGCTCCCTGGCACAGATTCCTCATGTC...GGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTTGGTGCCCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTCACGGCAACATGTACAGCAATAAATTAGGTGGTGGCCATGAGGCAGGGCCGCAGGGTTCACAGTaGGCAGGTAGACATGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SSHGNMYSNKLGGGHEAGPQGSQ*AGRHEE Trigger: TTCCTCATGTCTACCTGCCCACTGTGAACCCTGCGG...CCCTGCCTCATGGCCACCACCTAATTTATTGCTGTACATGTTGCCGTGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGAAATGAAATTGCCAAGTGGCAGGTGGCTGAGGATGCCAGGTCTCTGCGTGCAGCCCTGTCTACCCTaGAGGCCAAGAATATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: IEMKLPSGRWLRMPGLCVQPCLP*RPRIWS Trigger: GCTCCATATTCTTGGCCTCCAGGGTAGACAGGGCTG...CACGCAGAGACCTGGCATCCTCAGCCACCTGCCACTTGGCAATTTCATTTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTATCCATGGTCCTTATTaGTATCCAATATGGATTACC | + |
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Preference number: 2 (lower is better) Translates to: RKTTTGQAWAASHSQWSSIHGPY*YPIWIT Trigger: GGTAATCCATATTGGATATCAATAAGGACCATGGAT...AGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR-3UTR GCA 90 bp | TACAAAAGCAGTCACGGCAACATGTACAGCAATAAATTAGGTGGTGGCCATGAGGACATGAGGAATCTGTaGCAGGGAGCCTGGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: YKSSHGNMYSNKLGGGHEDMRNL*QGAWDR Trigger: CCTATCCCAGGCTCCCTGGCACAGATTCCTCATGTC...CTCATGGCCACCACCTAATTTATTGCTGTACATGTTGCCGTGACTGCTTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
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| 3UTR-3UTR GCA 90 bp | ATATCCAATATGGATTACCTACCAAGGCTATGGTTCCAACAGTGCTTGCTTTCTTTGCAACTTACAGTCTaGCTGGGGTCCTTGCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: ISNMDYLPRLWFQQCLLSLQLTV*LGSLLT Trigger: GGTCAGCAAGGACCCCAGGCAGACTGTAAGTTGCAA...AGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATCCATATTGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGTCCAACCTACTCTGCATTAATAAAGATCTACAGTATCAAACTGGGAAAGAATTGCAACTTACAGTCTaGCTGGGGTCCTTGCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: PSNLLCINKDLQYQTGKELQLTV*LGSLLT Trigger: GGTCAGCAAGGACCCCAGGCAGACTGTAAGTTGCAA...TTCTTTCCCAGTTTGATACTGTAGATCTTTATTAATGCAGAGTAGGTTGGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | ACTCACACCCTTCCCAGCCCCTCCAGGCAGGTGCCCTaGACGGGTGCTCCGGGTAGCACTGACAGCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: THTLPSPSRQVP*TGAPGSTDSPV Trigger: GACAGGGCTGTCAGTGCTACCCGGAGCACCCGTGCAGGGCACCTGCCTGGAGGGGCTGGGAAGGGTGTGAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | CCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTaGCACCCTGGGCCTTCGTTCCCCACCCCACCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSATAGKTEEGC*HPGPSFPTPPS Trigger: GGACGGTGGGGTGGGGAACGAAGGCCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | GAGCCTCCGCCCAGGAAGACCACCACAGGCCAGGCGTaGGCAGCAAGCCACAGTCAGTGGTCATCTGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: EPPPRKTTTGQA*AASHSQWSSAY Trigger: GTAGGCAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCCTGGGCGGAGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR TCA 72 bp | AGTGACCCAGCTGCCCAGTGCCACCGCAGGAAAGACTaGGGAAGGCTGTTGGCACCCTGGGCCTTCGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SDPAAQCHRRKD*GRLLAPWAFVP Trigger: GGGAACGAAGGCCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGGCAGCTGGGTCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | GGGCAGGTAGACATGAGGAATCTGTGCCAGGGAGCCTaGGATAGGCATGAGGGCTGTGCCACTGCCCGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GQVDMRNLCQGA*DRHEGCATART Trigger: GGTGCGGGCAGTGGCACAGCCCTCATGCCTATCCCAGGCTCCCTGGCACAGATTCCTCATGTCTACCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGCCCCTGACTCCCTGTCTACCATATTCCCCAGGACCTGGAGGACACGACCCCAGCCTGGCTGTTaGCTGGCTCTGTGGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QPAPDSLSTIFPRTWRTRPQPGC*LALWTG Trigger: GCCTGTCCACAGAGCCAGCAAACAGCCAGGCTGGGG...TCGTGTCCTCCAGGTCCTGGGGAATATGGTAGACAGGGAGTCAGGGGCAGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGCTGTTGGCACCCTGGGCCTTCGTTCCCCACCCCACCGTCCAACCTACTAGGGGAAGGAGAGATTaGAGAGGGCGTTGCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRLLAPWAFVPHPTVQPTRGRRD*RGRCLR Trigger: CCTCAAGCAACGCCCTCTCAAATCTCTCCTTCCCCT...AGTAGGTTGGACGGTGGGGTGGGGAACGAAGGCCCAGGGTGCCAACAGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGGAGCAGGCTTCACCAGTGACCCAGCTGCCCAGTGCCACCGCAGGAAAGAGGGGAAGGAGAGATTaGAGAGGGCGTTGCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLEQASPVTQLPSATAGKRGRRD*RGRCLR Trigger: CCTCAAGCAACGCCCTCTCAAATCTCTCCTTCCCCT...CTTTCCTGCGGTGGCACTGGGCAGCTGGGTCACTGGTGAAGCCTGCTCCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCCCAGGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTTGGTTCCAACAGTGCTaGCTTTCTAAGTGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPGRPPQARRGQQATVSGWFQQC*LSKCLA Trigger: AGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCA...ACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCCTGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | AGGGTTCACAGTGGGCAGGTAGACATGAGGAATCTGTaGCAGGGAGCCTGGGATAGGCATGAGGGCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RVHSGQVDMRNL*QGAWDRHEGCA Trigger: GGCACAGCCCTCATGCCTATCCCAGGCTCCCTGGCACAGATTCCTCATGTCTACCTGCCCACTGTGAACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | CCTCTCAGGCCTCTTCCACATCCCCTGGACCTCGACTaGCAGGACTCCGCACTATCCCTGTCTACTTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLRPLPHPLDLD*QDSALSLSTSF Trigger: GAACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGGTCCAGGGGATGTGGAAGAGGCCTGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | ACAAGAAGGCCCAAGCCCAGAAAGGGACAGGCAGAATaGTGTCTACCCCAGCTGGAGGCCCTTAGAGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TRRPKPRKGQAE*CLPQLEALRGD Trigger: GTCCCCTCTAAGGGCCTCCAGCTGGGGTAGACACCATTCTGCCTGTCCCTTTCTGGGCTTGGGCCTTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTGGCACCCTGGGCCTTCGTGGTTCCAACAGTGCTaGCTTTCTAAGTGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSATAGKTEEGCWHPGPSWFQQC*LSKCLA Trigger: AGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCA...CGAAGGCCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTCACGGCAACATGTACAGCAATAAATTAGGTGGTGGCCATGAGGCAGGGCCCCAGCCTGGCTGTTaGCTGGCTCTGTGGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSHGNMYSNKLGGGHEAGPQPGC*LALWTG Trigger: GCCTGTCCACAGAGCCAGCAAACAGCCAGGCTGGGG...CCCTGCCTCATGGCCACCACCTAATTTATTGCTGTACATGTTGCCGTGACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
||
| 3UTR GCA 72 bp | CACTGGCTCCTGAGAGCTTCCCTTTTATCCTGCATCTaGTGTCCCTGCTGTTCCTGCTGTCCCTGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HWLLRASLLSCI*CPCCSCCPCPQ Trigger: CTGAGGGCAGGGACAGCAGGAACAGCAGGGACAGCAGATGCAGGATAAAAGGGAAGCTCTCAGGAGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | AGGCCCTCCGGACTCAGTCTCTGTCCCTTAATACTATaGCTCTCAGGCCTCTTCCACATCCCCTGGACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: RPSGLSLCPLIL*LSGLFHIPWTS Trigger: CGAGGTCCAGGGGATGTGGAAGAGGCCTGAGAGGCATAGTATTAAGGGACAGAGACTGAGTCCGGAGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | CCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTaGCTACCACTGTACTCATCCAGTGTGACACGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGVGSKPQSVVI*LPLYSSSVTRA Trigger: AGCACGTGTCACACTGGATGAGTACAGTGGTAGGCAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | CCAAGGCTATGGTTCCAACAGTGCTTGCTTTCTAAGTaGCTGGCTGTGACTCAGCCTGCCCCTGACTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRLWFQQCLLSK*LAVTQPAPDSL Trigger: CAGGGAGTCAGGGGCAGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR TCA 72 bp | AGTATTTGCAACTTACAGTCTGCCTGGGGTCCTTGCTaGCCTGCCTACCATGGGTGTGTCCACAAGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SICNLQSAWGPC*PAYHGCVHKAL Trigger: GAGGGCCTTGTGGACACACCCATGGTAGGCAGGTCAGCAAGGACCCCAGGCAGACTGTAAGTTGCAAATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | TTAATACTATGCCTCTCAGGCCTCTTCCACATCCCCTaGACCTCGACTGCCAGGACTCCGCACTATCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LILCLSGLFHIP*TSTARTPHYPC Trigger: ACAGGGATAGTGCGGAGTCCTGGCAGTCGAGGTCCAGGGGATGTGGAAGAGGCCTGAGAGGCATAGTATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTGCCTACAAAGATGCAGAGTATTaGCAACTTACAGTCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTTGQAWAASHSQWSSAYKDAEY*QLTVCL Trigger: CAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTT...GTAGGCAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR TCA 72 bp | GGTTCCAACAGTGCTTGCTTTCTAAGTGCCTGGCTGTaGCTCAGCCTGCCCCTGACTCCCTGTCTACCATAT | + |
|
Preference number: 3 (lower is better) Translates to: GSNSACFLSAWL*LSLPLTPCLPY Trigger: ATATGGTAGACAGGGAGTCAGGGGCAGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR TCA 72 bp | AGTGGCCCAGCATGCCCAGTGCCACCACAGAAAAGATaGCAGTCAGTGGTCATCTGCCTACCACTGTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGPACPVPPQKR*QSVVICLPLYS Trigger: TGAGTACAGTGGTAGGCAGATGACCACTGACTGTCATCTTTTCTGTGGTGGCACTGGGCATGCTGGGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | GGCACCAAAGATGCAGAGTATTTGCAACTTACAGTCTaGCTGGGGTCCTTGCTGACCTGCCTACCATGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GTKDAEYLQLTV*LGSLLTCLPWV Trigger: CACCCATGGTAGGCAGGTCAGCAAGGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTTGGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | GGAAGGAGAGATTTGAGAGGGCGTTGCTTGAGGCACTaGCTCCTGAGAGCTTCCCTTTTATCCTGCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRRDLRGRCLRH*LLRASLLSCIC Trigger: GCAGATGCAGGATAAAAGGGAAGCTCTCAGGAGCCAGTGCCTCAAGCAACGCCCTCTCAAATCTCTCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | AGCCTGTGTACACACAGGAACACAGACATTAGCCCCTaGAAGTGTTTCCCAGGACATGAGCCTGGCTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLCTHRNTDISP*KCFPGHEPGSK Trigger: CTTAGAGCCAGGCTCATGTCCTGGGAAACACTTGCAGGGGCTAATGTCTGTGTTCCTGTGTGTACACAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR GCA 72 bp | CCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTTTTaGAGCAACACACGTCTCACCTGCCAGCGACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PHYPCLLRSCSF*SNTRLTCQRHL Trigger: GAGATGTCGCTGGCAGGTGAGACGTGTGTTGCTGCAAAAAGAACAGGAACGAAGTAGACAGGGATAGTGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCACAAGGCCCTCCGGACTCAGTCTCTGTCCCTTAATACTATGCCTCTCAGGTCGTTCCTGTTCTTTTaGCAGCAACACACGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VHKALRTQSLSLNTMPLRSFLFF*QQHTSH Trigger: GTGAGACGTGTGTTGCTGCAAAAAGAACAGGAACGA...CCTGAGAGGCATAGTATTAAGGGACAGAGACTGAGTCCGGAGGGCCTTGTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAAAAGCAGTCACGGCAACATGTACAGCAATAAATTAGGTGGTGGCCATGAGGTCTGCCTGGGGTCCTaGCTGACCTGCCTACCATGG | + |
|
Preference number: 3 (lower is better) Translates to: YKSSHGNMYSNKLGGGHEVCLGS*LTCLPW Trigger: CCATGGTAGGCAGGTCAGCAAGGACCCCAGGCAGAC...CTCATGGCCACCACCTAATTTATTGCTGTACATGTTGCCGTGACTGCTTTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
||
| 3UTR GCA 72 bp | GGGCCTTCGTTCCCCACCCCACCGTCCAACCTACTCTaGATTAATAAAGATCTACAGTATCAAACTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPSFPTPPSNLL*INKDLQYQTGK Trigger: TTTCCCAGTTTGATACTGTAGATCTTTATTAATGCAGAGTAGGTTGGACGGTGGGGTGGGGAACGAAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAAATGAAATTGCCAAGTGGCAGGTGGCTGAGGATGCCAGGTCTCTGCGTGAAAGATGCAGAGTATTaGCAACTTACAGTCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IEMKLPSGRWLRMPGLCVKDAEY*QLTVCL Trigger: CAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTT...CACGCAGAGACCTGGCATCCTCAGCCACCTGCCACTTGGCAATTTCATTTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
||
| 3UTR GCA 72 bp | AATATGGATTACCTACCAAGGCTATGGTTCCAACAGTaGTTGCTTTCTAAGTGCCTGGCTGTGACTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NMDYLPRLWFQQ*LLSKCLAVTQP Trigger: AGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATCCATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CCA 72 bp | AAAATAAATATTGAAATGAAATTGCCAAGTGGCAGGTaGCTGAGGATGCCAGGTCTCTGCGTGGTCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: KINIEMKLPSGR*LRMPGLCVVSM Trigger: CATGCTGACCACGCAGAGACCTGGCATCCTCAGCCACCTGCCACTTGGCAATTTCATTTCAATATTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
||
| 3UTR CCA 72 bp | TTATTGATATCCAATATGGATTACCTACCAAGGCTATaGTTCCAACAGTGCTTGCTTTCTAAGTGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLISNMDYLPRL*FQQCLLSKCLA Trigger: AGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATCCATATTGGATATCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTTGGCACCCTGGGCCTTCGTTCCCCACCCCACCGTCCAACCTACTCTGCACCACCTTGGTGGGTGTaGCAGGCCCTCGGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGTLGLRSPPHRPTYSAPPWWV*QALGPR Trigger: CCGTGGCCCGAGGGCCTGTCACACCCACCAAGGTGG...TGCAGAGTAGGTTGGACGGTGGGGTGGGGAACGAAGGCCCAGGGTGCCAACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR GCA 90 bp | CGCCCAGGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTAGTGTGCGCCGCCGCTaGTTCAGCCGAGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGRPPQARRGQQATVSGSVRRR*FSRVTS Trigger: GGAGGTCACTCGGCTGAAGCAGCGGCGGCGCACACT...ACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCCTGGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTTGGCACCCTGGGCCTTCGTTCCCCACCCCACCGTCCAACCTACTCTGCAGCCCTCGGGCCACGGTaGGAGCGAAGGTCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGTLGLRSPPHRPTYSAALGPR*ERRSVG Trigger: CCCTACAGACCTTCGCTCGCACCGTGGCCCGAGGGC...TGCAGAGTAGGTTGGACGGTGGGGTGGGGAACGAAGGCCCAGGGTGCCAACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGCCCCTGACTCCCTGTCTACCATATTCCCCAGGACCTGGAGGACACGACCACCTTGGTGGGTGTaGCAGGCCCTCGGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QPAPDSLSTIFPRTWRTRPPWWV*QALGPR Trigger: CCGTGGCCCGAGGGCCTGTCACACCCACCAAGGTGG...TCGTGTCCTCCAGGTCCTGGGGAATATGGTAGACAGGGAGTCAGGGGCAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGTGCCAGGGAGCCTGGGATAGGCATGAGGGCTGTGCCACTGCCCGCACCAGTGTGCGCCGCCGCTaGTTCAGCCGAGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLCQGAWDRHEGCATARTSVRRR*FSRVTS Trigger: GGAGGTCACTCGGCTGAAGCAGCGGCGGCGCACACT...GGTGCGGGCAGTGGCACAGCCCTCATGCCTATCCCAGGCTCCCTGGCACAGATT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTGCACCCGCCTCCTTCTTaGCCTTCAATGCCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPPQARRGQQATVSGHLHPPPS*PSMPCW Trigger: CCAACAAGGCATTGAAGGTCAAGAAGGAGGCGGGTG...CAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTGTGTAGCTCCACACGCTaGCGTTCCAGCTCCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRPPQARRGQQATVSGHLCSSTR*RSSSSF Trigger: GAAAGAGGAGCTGGAACGGCAGCGTGTGGAGCTACA...CAGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGACCACCACAGGCCAGGCGTGGGCAGCAAGCCACAGTCAGTGGTCATCTGCTCCCGCACTGACATaGACACCAGCTCATCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKTTTGQAWAASHSQWSSAPALT*TPAHHR Trigger: GCGATGATGAGCTGGTGTCCATGTCAGTGCGGGAGC...AGATGACCACTGACTGTGGCTTGCTGCCCACGCCTGGCCTGTGGTGGTCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGCCTACCATGGGTGTGTCCACAAGGCCCTCCGGACTCAGTCTCTGTCCCTTGTAGCTCCACACGCTaGCGTTCCAGCTCCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLPWVCPQGPPDSVSVPCSSTR*RSSSSF Trigger: GAAAGAGGAGCTGGAACGGCAGCGTGTGGAGCTACA...AGGGACAGAGACTGAGTCCGGAGGGCCTTGTGGACACACCCATGGTAGGCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCGACATCTCTCAGCACCTCTCAGGCTTCACCTGCTCCTCTCTCTCTCTCAGAAGGGTACAGAGGTaGAGGAGAGCTCGGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ASDISQHLSGFTCSSLSLRRVQR*RRARQI Trigger: AATCTGCCGAGCTCTCCTCCACCTCTGTACCCTTCT...GAGAGAGAGAGAGGAGCAGGTGAAGCCTGAGAGGTGCTGAGAGATGTCGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
||
| 3UTR CAA 72 bp | ACACACCCCCAGGGGAAGGAGAGATTTGAGAGGGCGTaGCTTGAGGCACTGGCTCCTGAGAGCTTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: THPQGKERFERA*LEALAPESFPF Trigger: AAAAGGGAAGCTCTCAGGAGCCAGTGCCTCAAGCAACGCCCTCTCAAATCTCTCCTTCCCCTGGGGGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CAA 72 bp | GCAGAGTATTTGCAACTTACAGTCTGCCTGGGGTCCTaGCTGACCTGCCTACCATGGGTGTGTCCACAAGGC | + |
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Preference number: 4 (lower is better) Translates to: AEYLQLTVCLGS*LTCLPWVCPQG Trigger: GCCTTGTGGACACACCCATGGTAGGCAGGTCAGCAAGGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CCA 90 bp | ACCTCGACTGCCAGGACTCCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTTTGCTCCCGCACTGACATaGACACCAGCTCATCATCGC | + |
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Preference number: 4 (lower is better) Translates to: TSTARTPHYPCLLRSCSFAPALT*TPAHHR Trigger: GCGATGATGAGCTGGTGTCCATGTCAGTGCGGGAGC...AAAAGAACAGGAACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR TCA 90 bp | AGTGGGCACCAAAGATGCAGAGTATTTGCAACTTACAGTCTGCCTGGGGTCCTTCACCCGCCTCCTTCTTaGCCTTCAATGCCTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGHQRCRVFATYSLPGVLHPPPS*PSMPCW Trigger: CCAACAAGGCATTGAAGGTCAAGAAGGAGGCGGGTG...AAGGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTTGGTGCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CCA 90 bp | ATTGAAATGAAATTGCCAAGTGGCAGGTGGCTGAGGATGCCAGGTCTCTGCGTGAGAAGGGTACAGAGGTaGAGGAGAGCTCGGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: IEMKLPSGRWLRMPGLCVRRVQR*RRARQI Trigger: AATCTGCCGAGCTCTCCTCCACCTCTGTACCCTTCT...CACGCAGAGACCTGGCATCCTCAGCCACCTGCCACTTGGCAATTTCATTTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
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| 3UTR CAA 72 bp | ATGGATTACCTACCAAGGCTATGGTTCCAACAGTGCTaGCTTTCTAAGTGCCTGGCTGTGACTCAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: MDYLPRLWFQQC*LSKCLAVTQPA Trigger: GGCAGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| 3UTR CAA 72 bp | GGTCTCTGCGTGGTCAGCATGTGTCCCTGTCACCTTTaGAAAAAGTTAAAGCTTACTTTCAGAAGTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLCVVSMCPCHL*KKLKLTFRSQR Trigger: CCTTTGACTTCTGAAAGTAAGCTTTAACTTTTTCAAAAGGTGACAGGGACACATGCTGACCACGCAGAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018287.10 |
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| CDS GCA 90 bp | TCCAGCCGCATGCTGCTGTTCTCTCGAGCCAGCTTCTCCACCTCCTaGTGTAGCTCCACACGCTGCCGTTCCAGCTCCTCTTTCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SSRMLLFSRASFSTS*CSSTRCRSSSSFCV Trigger: GACACAGAAAGAGGAGCTGGAACGGCAGCGTGTGGAGCTACAGCAGGAGGTGGAGAAGCTGGCTCGAGAGAACAGCAGCATGCGGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS GCA 90 bp | GTAGGGCCTCATACTTGGAGCGCAGGGCATCTAGCTCCAGCCGCATaGTGCTGTTCTCTCGAGCCAGCTTCTCCACCTCCTGCTGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: VGPHTWSAGHLAPAA*CCSLEPASPPPAVA Trigger: AGCTACAGCAGGAGGTGGAGAAGCTGGCTCGAGAGAACAGCAGCATGCGGCTGGAGCTAGATGCCCTGCGCTCCAAGTATGAGGCCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | CAGCTGCCCAGTGCCACCGCAGGAAAGACTGAGGAAGGCTGTTGGCACCCTGGGGAGAGCTCGGCAGATTaGACGATGGTGATGACACTG | + |
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Preference number: 5 (lower is better) Translates to: QLPSATAGKTEEGCWHPGESSAD*TMVMTL Trigger: CAGTGTCATCACCATCGTCAAATCTGCCGAGCTCTC...CCCAGGGTGCCAACAGCCTTCCTCAGTCTTTCCTGCGGTGGCACTGGGCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS GCA 90 bp | TTCTCTCGAGCCAGCTTCTCCACCTCCTGCTGTAGCTCCACACGCTaGCGTTCCAGCTCCTCTTTCTGTGTCACACGCTTGATGCGACAG | + |
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Preference number: 5 (lower is better) Translates to: FSRASFSTSCCSSTR*RSSSSFCVTRLMRQ Trigger: CTGTCGCATCAAGCGTGTGACACAGAAAGAGGAGCTGGAACGGCAGCGTGTGGAGCTACAGCAGGAGGTGGAGAAGCTGGCTCGAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | AATCTGTGCCAGGGAGCCTGGGATAGGCATGAGGGCTGTGCCACTGCCCGCACCTTGACCTTCAATGCCTaGTTGGGCTTGGGATTAGTC | + |
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Preference number: 5 (lower is better) Translates to: NLCQGAWDRHEGCATARTLTFNA*LGLGLV Trigger: GACTAATCCCAAGCCCAACAAGGCATTGAAGGTCAA...GGTGCGGGCAGTGGCACAGCCCTCATGCCTATCCCAGGCTCCCTGGCACAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | AGGCTATGGTTCCAACAGTGCTTGCTTTCTAAGTGCCTGGCTGTGACTCAGCCTCTGGTGGTGGCCACCTaGGTGGGTGTGACAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RLWFQQCLLSKCLAVTQPLVVAT*VGVTGP Trigger: AGGGCCTGTCACACCCACCAAGGTGGCCACCACCAG...AGGCTGAGTCACAGCCAGGCACTTAGAAAGCAAGCACTGTTGGAACCATAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | CAAGTGGGCACCAAAGATGCAGAGTATTTGCAACTTACAGTCTGCCTGGGGTCCCTGGTGGTGGCCACCTaGGTGGGTGTGACAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: QVGTKDAEYLQLTVCLGSLVVAT*VGVTGP Trigger: AGGGCCTGTCACACCCACCAAGGTGGCCACCACCAG...GGACCCCAGGCAGACTGTAAGTTGCAAATACTCTGCATCTTTGGTGCCCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | CATTCATGCAACCCTCGGCGCACATACTGGACAGGCTCTCCCATGTGGCCACCTTCACCCGCCTCCTTCTaGACCTTCAATGCCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HSCNPRRTYWTGSPMWPPSPASF*TFNALL Trigger: CAACAAGGCATTGAAGGTCAAGAAGGAGGCGGGTGA...AGGTGGCCACATGGGAGAGCCTGTCCAGTATGTGCGCCGAGGGTTGCATGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | ACATTCATGCAACCCTCGGCGCACATACTGGACAGGCTCTCCCATGTGGCCACCACCTTCAATGCCTTGTaGGGCTTGGGATTAGTCGTC | + |
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Preference number: 5 (lower is better) Translates to: TFMQPSAHILDRLSHVATTFNAL*GLGLVV Trigger: GACGACTAATCCCAAGCCCAACAAGGCATTGAAGGT...GGTGGCCACATGGGAGAGCCTGTCCAGTATGTGCGCCGAGGGTTGCATGAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | ACCTGCCTACCATGGGTGTGTCCACAAGGCCCTCCGGACTCAGTCTCTGTCCCTTTGACCTTCAATGCCTaGTTGGGCTTGGGATTAGTC | + |
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Preference number: 5 (lower is better) Translates to: TCLPWVCPQGPPDSVSVPLTFNA*LGLGLV Trigger: GACTAATCCCAAGCCCAACAAGGCATTGAAGGTCAA...AGGGACAGAGACTGAGTCCGGAGGGCCTTGTGGACACACCCATGGTAGGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | ACCTCGACTGCCAGGACTCCGCACTATCCCTGTCTACTTCGTTCCTGTTCTTTTTGTAGGGCCTCATACTaGGAGCGCAGGGCATCTAGC | + |
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Preference number: 5 (lower is better) Translates to: TSTARTPHYPCLLRSCSFCRASY*ERRASS Trigger: GCTAGATGCCCTGCGCTCCAAGTATGAGGCCCTACA...AAAAGAACAGGAACGAAGTAGACAGGGATAGTGCGGAGTCCTGGCAGTCGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | AGGCCCTCCGGACTCAGTCTCTGTCCCTTAATACTATGCCTCTCAGGCCTCTTCACCTTCAATGCCTTGTaGGGCTTGGGATTAGTCGTC | + |
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Preference number: 5 (lower is better) Translates to: RPSGLSLCPLILCLSGLFTFNAL*GLGLVV Trigger: GACGACTAATCCCAAGCCCAACAAGGCATTGAAGGT...GAAGAGGCCTGAGAGGCATAGTATTAAGGGACAGAGACTGAGTCCGGAGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | TCCTGTTCTTTTTGCAGCAACACACGTCTCACCTGCCAGCGACATCTCTCAGCAGAGAGCTCGGCAGATTaGACGATGGTGATGACACTG | + |
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Preference number: 5 (lower is better) Translates to: SCSFCSNTRLTCQRHLSAESSAD*TMVMTL Trigger: CAGTGTCATCACCATCGTCAAATCTGCCGAGCTCTC...TGCTGAGAGATGTCGCTGGCAGGTGAGACGTGTGTTGCTGCAAAAAGAACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS-3UTR CAA 90 bp | ATATCCAATATGGATTACCTACCAAGGCTATGGTTCCAACAGTGCTTGCTTTCTTGTAGGGCCTCATACTaGGAGCGCAGGGCATCTAGC | + |
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Preference number: 5 (lower is better) Translates to: ISNMDYLPRLWFQQCLLSCRASY*ERRASS Trigger: GCTAGATGCCCTGCGCTCCAAGTATGAGGCCCTACA...AGAAAGCAAGCACTGTTGGAACCATAGCCTTGGTAGGTAATCCATATTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS CAA 90 bp | GAGGCGGCTGAGAAGGGTACAGAGGTGGAGGAGAGCTCGGCAGATTaGACGATGGTGATGACACTGGTGGTGGCCACCTTGGTGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EAAEKGTEVEESSAD*TMVMTLVVATLVGV Trigger: CACACCCACCAAGGTGGCCACCACCAGTGTCATCACCATCGTCAAATCTGCCGAGCTCTCCTCCACCTCTGTACCCTTCTCAGCCGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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| CDS CAA 72 bp | GAGAAGGGTACAGAGGTGGAGGAGAGCTCGGCAGATTaGACGATGGTGATGACACTGGTGGTGGCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: EKGTEVEESSAD*TMVMTLVVATL Trigger: CAAGGTGGCCACCACCAGTGTCATCACCATCGTCAAATCTGCCGAGCTCTCCTCCACCTCTGTACCCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018287.10 ENSMUST00000110836.2 |
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