Pregenerated sensors for MAFG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051510Ensembl transcript IDs: ENSMUST00000058162.14, ENSMUST00000106180.2, ENSMUST00000106181.8, ENSMUST00000106182.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGTCTTGTCCGGTGCACTGTGCCAGGCTCCAGCACCATGGTTCCTaGCCCAGTGCCCAGGCTGGTGGCCTATTCACCCAGGGGCGTCAA | + |
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Preference number: 1 (lower is better) Translates to: RSCPVHCARLQHHGS*PSAQAGGLFTQGRQ Trigger: TTGACGCCCCTGGGTGAATAGGCCACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGGAGCCTGGCACAGTGCACCGGACAAGACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | GGCGATTCGGTCTTGTCCGGTGCACTGTGCCAGGCTCCAGCACCATaGTTCCTGCCCCAGTGCCCAGGCTGGTGGCCTATTCACCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: GDSVLSGALCQAPAP*FLPQCPGWWPIHPG Trigger: CCCTGGGTGAATAGGCCACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGGAGCCTGGCACAGTGCACCGGACAAGACCGAATCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | CCACCCACACTCATAACCGGCGATTCGGTCTTGTCCGGTGCACTGTaGCAGGCTCCAGCACCATGGTTCCTGCCCCAGTGCCCAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PPTLITGDSVLSGAL*QAPAPWFLPQCPGW Trigger: CCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGGAGCCTGGCACAGTGCACCGGACAAGACCGAATCGCCGGTTATGAGTGTGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | ACCAGGGAGACAAGGGCAGCCCCAAGACCAGTACACTTGCCCACGTaGACTCTCGTCCACTCCCACAGCGCCCACTCTGGACTCCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: TRETRAAPRPVHLPT*TLVHSHSAHSGLLA Trigger: GGCTAGGAGTCCAGAGTGGGCGCTGTGGGAGTGGACGAGAGTGCACGTGGGCAAGTGTACTGGTCTTGGGGCTGCCCTTGTCTCCCTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | TCCGGTGCACTGTGCCAGGCTCCAGCACCATGGTTCCTGCCCCAGTaGCCAGGCTGGTGGCCTATTCACCCAGGGGCGTCAAGACATAAC | + |
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Preference number: 1 (lower is better) Translates to: SGALCQAPAPWFLPQ*PGWWPIHPGASRHN Trigger: GTTATGTCTTGACGCCCCTGGGTGAATAGGCCACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGGAGCCTGGCACAGTGCACCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR TCA 90 bp | CAGGGGCCCCAGAGAAGACACCAGCTATGTCAGCAGGAGGCCATGTaGCCGCCCACACAGGGATGTAGCCTCTTGCAGGTGGGTATCCGC | + |
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Preference number: 1 (lower is better) Translates to: QGPQRRHQLCQQEAM*PPTQGCSLLQVGIR Trigger: GCGGATACCCACCTGCAAGAGGCTACATCCCTGTGTGGGCGGTCACATGGCCTCCTGCTGACATAGCTGGTGTCTTCTCTGGGGCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | ACACCTTCCACCCACACTCATAACCGGCGATTCGGTCTTGTCCGGTaGACTGTGCCAGGCTCCAGCACCATGGTTCCTGCCCCAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: TPSTHTHNRRFGLVR*TVPGSSTMVPAPVP Trigger: GGGCACTGGGGCAGGAACCATGGTGCTGGAGCCTGGCACAGTGCACCGGACAAGACCGAATCGCCGGTTATGAGTGTGGGTGGAAGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | GATCCCCTATGGCCCTACCCAGGTGCAGGAGACAGGGTCTCACCTTaGAGCCACACCACAGCCCCTCCTCACTTGGATGTTGAAGGACCC | + |
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Preference number: 1 (lower is better) Translates to: DPLWPYPGAGDRVSP*SHTTAPPHLDVEGP Trigger: GGGTCCTTCAACATCCAAGTGAGGAGGGGCTGTGGTGTGGCTGCAAGGTGAGACCCTGTCTCCTGCACCTGGGTAGGGCCATAGGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | AAGGTGGGCAGCCTCCACTGGAAAGGTGGGGTGAGGAGGCAGGCTTaGAACCTGCAGAGAAGCACCTCCAAGTCGAACAGCGGATCCCTG | + |
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Preference number: 1 (lower is better) Translates to: KVGSLHWKGGVRRQA*NLQRSTSKSNSGSL Trigger: CAGGGATCCGCTGTTCGACTTGGAGGTGCTTCTCTGCAGGTTCCAAGCCTGCCTCCTCACCCCACCTTTCCAGTGGAGGCTGCCCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | GATTGCTCTCCAAGTCCAGGCCTCACCTTGCAGCCAGATCCCCTATaGCCCTACCCAGGTGCAGGAGACAGGGTCTCACCTTGCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: DCSPSPGLTLQPDPL*PYPGAGDRVSPCSH Trigger: GTGGCTGCAAGGTGAGACCCTGTCTCCTGCACCTGGGTAGGGCCATAGGGGATCTGGCTGCAAGGTGAGGCCTGGACTTGGAGAGCAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | CCTCCAGGCTCTCACAGTGACACAGGGAAGAATGGTTGCCCTCAGTaGGGCCCCCGACCAATCTGCCTGGGAAACAACACCCCACAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: PPGSHSDTGKNGCPQ*GPRPICLGNNTPQN Trigger: GTTCTGTGGGGTGTTGTTTCCCAGGCAGATTGGTCGGGGGCCCCACTGAGGGCAACCATTCTTCCCTGTGTCACTGTGAGAGCCTGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | AGGAGGCCATGTGACCGCCCACACAGGGATGTAGCCTCTTGCAGGTaGGTATCCGCTTATGAGGAGCTTCCTGAGCCAAGCCTGGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RRPCDRPHRDVASCR*VSAYEELPEPSLEG Trigger: ACCTTCCAGGCTTGGCTCAGGAAGCTCCTCATAAGCGGATACCCACCTGCAAGAGGCTACATCCCTGTGTGGGCGGTCACATGGCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | GGATTTACTGTCAGGAAATCAAGGGCAAGGGACAGGGAGTGGAGCTaGAGGGCTGGCTCAACAGGGAAAGTTCCCCAGACTCAAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GFTVRKSRARDREWS*RAGSTGKVPQTQEA Trigger: TGCTTCTTGAGTCTGGGGAACTTTCCCTGTTGAGCCAGCCCTGCAGCTCCACTCCCTGTCCCTTGCCCTTGATTTCCTGACAGTAAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | AGCTTTAGCCAAGTGGCCACACCAGAGAGGGAGGTAGCAGGGAAGTaGCCTCACCATCTCCAAGTAGTTTATCAAAGCTGCAAACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: SFSQVATPEREVAGK*PHHLQVVYQSCKPW Trigger: CCAGGGTTTGCAGCTTTGATAAACTACTTGGAGATGGTGAGGCCACTTCCCTGCTACCTCCCTCTCTGGTGTGGCCACTTGGCTAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 90 bp | GGCTGGCTCAACAGGGAAAGTTCCCCAGACTCAAGAAGCAGGTGCTaGAAACCTGAAAGCCTTGAGCATAGCTCTATCCTGTTCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: GWLNRESSPDSRSRC*KPESLEHSSILFRS Trigger: GCTTCTGAACAGGATAGAGCTATGCTCAAGGCTTTCAGGTTTGCAGCACCTGCTTCTTGAGTCTGGGGAACTTTCCCTGTTGAGCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | GGTAGGAGGGAAGTCACACATTATGGTTTACTTAGCGGAGAAGTTTaGGAGACCTGGCCTCAGCCCAAGCTCTCCATTCGCTGTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: GRREVTHYGLLSGEV*ETWPQPKLSIRCVR Trigger: TCTGACACAGCGAATGGAGAGCTTGGGCTGAGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCATAATGTGTGACTTCCCTCCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR TCA 90 bp | AACCACTTTTCAGGGCAGAGCCCATCTCTTCCTTCTGGATTAAGCTaGGAGCCCCACTGGACTTCTGAAAGGAAAGCGCTCAAATCCCAC | + |
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Preference number: 1 (lower is better) Translates to: NHFSGQSPSLPSGLS*EPHWTSERKALKSH Trigger: GTGGGATTTGAGCGCTTTCCTTTCAGAAGTCCAGTGGGGCTCTCAGCTTAATCCAGAAGGAAGAGATGGGCTCTGCCCTGAAAAGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR TCA 90 bp | CAGGCAGCACTTCTGTATACCAGTCACAGAACCAAAGGGAGGGGATaGGGTCATCTGGTAACTCAGAATCAACAGTCCAGATTCCCACTC | + |
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Preference number: 1 (lower is better) Translates to: QAALLYTSHRTKGRG*GHLVTQNQQSRFPL Trigger: GAGTGGGAATCTGGACTGTTGATTCTGAGTTACCAGATGACCTCATCCCCTCCCTTTGGTTCTGTGACTGGTATACAGAAGTGCTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | GAATCAACAGTCCAGATTCCCACTCATATCCAACTCAGGCATCAATaGGACTGTCTGAGCACCTTGAGCCATAGTAGCCCACCAAAACGC | + |
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Preference number: 1 (lower is better) Translates to: ESTVQIPTHIQLRHQ*DCLSTLSHSSPPKR Trigger: GCGTTTTGGTGGGCTACTATGGCTCAAGGTGCTCAGACAGTCCCATTGATGCCTGAGTTGGATATGAGTGGGAATCTGGACTGTTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 90 bp | GAAGTCACACATTATGGTTTACTTAGCGGAGAAGTTTGGGAGACCTaGCCTCAGCCCAAGCTCTCCATTCGCTGTGTCAGAAAGTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: EVTHYGLLSGEVWET*PQPKLSIRCVRKSN Trigger: GTTTGACTTTCTGACACAGCGAATGGAGAGCTTGGGCTGAGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCATAATGTGTGACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CAA 90 bp | TGCGGACACTGGGGAAGAACAGACCTGGCCCTAGGGCCAAAGCCCTaGTCTGGCGATGGTGGAGGCCTCCAGGCTCTCACAGTGACACAG | + |
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Preference number: 2 (lower is better) Translates to: CGHWGRTDLALGPKP*SGDGGGLQALTVTQ Trigger: CTGTGTCACTGTGAGAGCCTGGAGGCCTCCACCATCGCCAGACAAGGGCTTTGGCCCTAGGGCCAGGTCTGTTCTTCCCCAGTGTCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCCTATGGCCCTACCCAGGTGCAGGAGACAGGGTCTCACCTTGCAGCCACAGCACCATGGTTCCTaGCCCAGTGCCCAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RSPMALPRCRRQGLTLQPQHHGS*PSAQAG Trigger: ACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTG...TGGCTGCAAGGTGAGACCCTGTCTCCTGCACCTGGGTAGGGCCATAGGGGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCCTATGGCCCTACCCAGGTGCAGGAGACAGGGTCTCACCTTGCAGCCATGCAAACCCTGGCCCTaGTCACCAAGGCTAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RSPMALPRCRRQGLTLQPCKPWP*SPRLTE Trigger: CTCTGTTAGCCTTGGTGATCAGGGCCAGGGTTTGCA...TGGCTGCAAGGTGAGACCCTGTCTCCTGCACCTGGGTAGGGCCATAGGGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | GAGACCCCAACGAAGCCTATAGGAACTAAGCTGAGGCCAGAAGGAAGACGGCCAGAAGAGGGACGGGGCTaGCAACTCTGCCACGCACCT | + |
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Preference number: 2 (lower is better) Translates to: ETPTKPIGTKLRPEGRRPEEGRG*QLCHAP Trigger: AGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTC...TGGCCGTCTTCCTTCTGGCCTCAGCTTAGTTCCTATAGGCTTCGTTGGGGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGAGGGAGGTAGCAGGGAAGTGGCCTCACCATCTCCAAGTAGTTTATCACACAAGGGAGGGCCCTaGGGCGGAGACCCCAACGAA | + |
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Preference number: 2 (lower is better) Translates to: TREGGSREVASPSPSSLSHKGGP*GGDPNE Trigger: TTCGTTGGGGTCTCCGCCCCAGGGCCCTCCCTTGTG...TGATAAACTACTTGGAGATGGTGAGGCCACTTCCCTGCTACCTCCCTCTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCAGATCCCCTATGGCCCTACCCAGGTGCAGGAGACAGGGTCTCACCTTGCAACTTCACTTACTCTaGCACTGCCTTAACCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: AARSPMALPRCRRQGLTLQLHLL*HCLNPS Trigger: GCTTGGGTTAAGGCAGTGGCAGAGTAAGTGAAGTTG...CAAGGTGAGACCCTGTCTCCTGCACCTGGGTAGGGCCATAGGGGATCTGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | CCACACCAGCTCTGCTGCCAGGCAGCACTTCTGTATACCAGTCACAGAACCAAAGCGCTCAAATCCCACTaGAGACCACCAGGGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PHQLCCQAALLYTSHRTKALKSH*RPPGRQ Trigger: TTGTCTCCCTGGTGGTCTGCAGTGGGATTTGAGCGC...TTTGGTTCTGTGACTGGTATACAGAAGTGCTGCCTGGCAGCAGAGCTGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR CCA 90 bp | TACTACTCCTGTTTAACACATACCCAGCCGCAGCCTCCTCTTCCTCATCCTCCCCCCGACCAATCTGCCTaGGAAACAACACCCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: YYSCLTHTQPQPPLPHPPPDQSA*ETTPHR Trigger: TCTGTGGGGTGTTGTTTCCCAGGCAGATTGGTCGGG...GGGAGGATGAGGAAGAGGAGGCTGCGGCTGGGTATGTGTTAAACAGGAGTAGTA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR CCA 90 bp | ATGGTTTACTTAGCGGAGAAGTTTGGGAGACCTGGCCTCAGCCCAAGCTCTCCAAAAAGCTGCGGACACTaGGGAAGAACAGACCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: MVYLAEKFGRPGLSPSSPKSCGH*GRTDLA Trigger: GGCCAGGTCTGTTCTTCCCCAGTGTCCGCAGCTTTT...TGGAGAGCTTGGGCTGAGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGTCACACATTATGGTTTACTTAGCGGAGAAGTTTGGGAGACCTGGCCTGGAAGACGCAGATCCTaGAGGAGGCAGAGTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: REVTHYGLLSGEVWETWPGRRRS*RRQSEG Trigger: GCCCTCACTCTGCCTCCTTCAGGATCTGCGTCTTCC...AGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCATAATGTGTGACTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGTCACACATTATGGTTTACTTAGCGGAGAAGTTTGGGAGACCTGGCCTTGTGGGCACCCACAGTaGCACCTTGGTCCCTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: REVTHYGLLSGEVWETWPCGHPQ*HLGPCN Trigger: ATTGCAGGGACCAAGGTGTCACTGTGGGTGCCCACA...AGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCATAATGTGTGACTTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | TACTACTCCTGTTTAACACATACCCAGCCGCAGCCTCCTCTTCCTCATCCTCCCCACTTACTCTGCCACTaGCTTAACCCAAGCCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: YYSCLTHTQPQPPLPHPPHLLCH*LNPSPR Trigger: TCTAGGGCTTGGGTTAAGGCAGTGGCAGAGTAAGTG...GGGAGGATGAGGAAGAGGAGGCTGCGGCTGGGTATGTGTTAAACAGGAGTAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCAGAAGCAAAGACCTACTACTCCTGTTTAACACATACCCAGCCGCAGCCAGGGATGTAGCCTCTTaGAGGTGGGTATCCGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LFRSKDLLLLFNTYPAAARDVAS*RWVSAY Trigger: ATAAGCGGATACCCACCTGCAAGAGGCTACATCCCT...GGCTGCGGCTGGGTATGTGTTAAACAGGAGTAGTAGGTCTTTGCTTCTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGTCAGGCAGAGTCAAGGTAGGAGGGAAGTCACACATTATGGTTTACTTAGGTCCACACCAGCTCTaGTGCCAGGCAGCACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KKSGRVKVGGKSHIMVYLGPHQL*CQAALL Trigger: CAGAAGTGCTGCCTGGCAGCAGAGCTGGTGTGGACC...TAAGTAAACCATAATGTGTGACTTCCCTCCTACCTTGACTCTGCCTGACTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGTCAGGCAGAGTCAAGGTAGGAGGGAAGTCACACATTATGGTTTACTTAGCCAAGCCTGGAAGGTaGGCAGCCTCCACTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: KKSGRVKVGGKSHIMVYLAKPGR*AASTGK Trigger: CTTTCCAGTGGAGGCTGCCCACCTTCCAGGCTTGGC...TAAGTAAACCATAATGTGTGACTTCCCTCCTACCTTGACTCTGCCTGACTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGTCAGGCAGAGTCAAGGTAGGAGGGAAGTCACACATTATGGTTTACTTAATCCTCCCAGGAGGCTaGACTGAGGCACTGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: KKSGRVKVGGKSHIMVYLILPGG*TEALGH Trigger: ATGGCCCAGTGCCTCAGTCCAGCCTCCTGGGAGGAT...TAAGTAAACCATAATGTGTGACTTCCCTCCTACCTTGACTCTGCCTGACTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CAA 90 bp | AAAGTTCCCCAGACTCAAGAAGCAGGTGCTGCAAACCTGAAAGCCTaGAGCATAGCTCTATCCTGTTCAGAAGCAAAGACCTACTACTCC | + |
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Preference number: 2 (lower is better) Translates to: KVPQTQEAGAANLKA*SIALSCSEAKTYYS Trigger: GGAGTAGTAGGTCTTTGCTTCTGAACAGGATAGAGCTATGCTCAAGGCTTTCAGGTTTGCAGCACCTGCTTCTTGAGTCTGGGGAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CAA 90 bp | GGACTCTCTGGGACCATACTCTACAGAGGAAACTGTGGACTTTCTTaGAAATCTGAGTGTCTATGTCCAAGGAAGAAGTCAGGCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: GLSGTILYRGNCGLS*KSECLCPRKKSGRV Trigger: GACTCTGCCTGACTTCTTCCTTGGACATAGACACTCAGATTTCAAAGAAAGTCCACAGTTTCCTCTGTAGAGTATGGTCCCAGAGAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 72 bp | CCAGGGAGACAAGGGCAGCCCCAAGACCAGTACACTTaGCCACGTGCACTCTCGTCCACTCCCACAGCGCCC | + |
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Preference number: 3 (lower is better) Translates to: PGRQGQPQDQYT*PRALSSTPTAP Trigger: GGGCGCTGTGGGAGTGGACGAGAGTGCACGTGGGCAAGTGTACTGGTCTTGGGGCTGCCCTTGTCTCCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 72 bp | CACGTGCACTCTCGTCCACTCCCACAGCGCCCACTCTaGACTCCTAGCCTGCACGGCCTTGGTACAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: HVHSRPLPQRPL*TPSLHGLGTKG Trigger: CCCCTTTGTACCAAGGCCGTGCAGGCTAGGAGTCCAGAGTGGGCGCTGTGGGAGTGGACGAGAGTGCACGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 72 bp | AGACCTGGCCCTAGGGCCAAAGCCCTTGTCTGGCGATaGTGGAGGCCTCCAGGCTCTCACAGTGACACAGGG | + |
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Preference number: 3 (lower is better) Translates to: RPGPRAKALVWR*WRPPGSHSDTG Trigger: CCCTGTGTCACTGTGAGAGCCTGGAGGCCTCCACCATCGCCAGACAAGGGCTTTGGCCCTAGGGCCAGGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR TCA 72 bp | TGTCTGGCGATGGTGGAGGCCTCCAGGCTCTCACAGTaGCACAGGGAAGAATGGTTGCCCTCAGTGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: CLAMVEASRLSQ*HREEWLPSVGP Trigger: GGGCCCCACTGAGGGCAACCATTCTTCCCTGTGTCACTGTGAGAGCCTGGAGGCCTCCACCATCGCCAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 72 bp | ACAAGGGCAGCCCCAAGACCAGTACACTTGCCCACGTaGACTCTCGTCCACTCCCACAGCGCCCACTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TRAAPRPVHLPT*TLVHSHSAHSG Trigger: TCCAGAGTGGGCGCTGTGGGAGTGGACGAGAGTGCACGTGGGCAAGTGTACTGGTCTTGGGGCTGCCCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 72 bp | CTCATAACCGGCGATTCGGTCTTGTCCGGTGCACTGTaGCAGGCTCCAGCACCATGGTTCCTGCCCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: LITGDSVLSGAL*QAPAPWFLPQC Trigger: GCACTGGGGCAGGAACCATGGTGCTGGAGCCTGGCACAGTGCACCGGACAAGACCGAATCGCCGGTTATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR GCA 72 bp | CCTCCAGGCTCTCACAGTGACACAGGGAAGAATGGTTaGCCTCAGTGGGGCCCCCGACCAATCTGCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PPGSHSDTGKNG*PQWGPRPICLG Trigger: TCCCAGGCAGATTGGTCGGGGGCCCCACTGAGGGCAACCATTCTTCCCTGTGTCACTGTGAGAGCCTGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 72 bp | CCAGCACCATGGTTCCTGCCCCAGTGCCCAGGCTGGTaGCCTATTCACCCAGGGGCGTCAAGACATAACCAC | + |
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Preference number: 3 (lower is better) Translates to: PAPWFLPQCPGW*PIHPGASRHNH Trigger: GTGGTTATGTCTTGACGCCCCTGGGTGAATAGGCCACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 72 bp | GCTCCAGCACCATGGTTCCTGCCCCAGTGCCCAGGCTaGTGGCCTATTCACCCAGGGGCGTCAAGACATAAC | + |
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Preference number: 3 (lower is better) Translates to: APAPWFLPQCPG*WPIHPGASRHN Trigger: GTTATGTCTTGACGCCCCTGGGTGAATAGGCCACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CCA 72 bp | CCAAGTCCAGGCCTCACCTTGCAGCCAGATCCCCTATaGCCCTACCCAGGTGCAGGAGACAGGGTCTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: PSPGLTLQPDPL*PYPGAGDRVSP Trigger: AGGTGAGACCCTGTCTCCTGCACCTGGGTAGGGCCATAGGGGATCTGGCTGCAAGGTGAGGCCTGGACTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | TCCTCCAGGCATGGGCACGGTCCACACCAGCTCTGCTaGCAGGCAGCACTTCTGTATACCAGTCACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: SSRHGHGPHQLC*QAALLYTSHRT Trigger: GGTTCTGTGACTGGTATACAGAAGTGCTGCCTGGCAGCAGAGCTGGTGTGGACCGTGCCCATGCCTGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | TCGTCCTCCAGGCATGGGCACGGTCCACACCAGCTCTaGTGCCAGGCAGCACTTCTGTATACCAGTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSRHGHGPHQL*CQAALLYTSHR Trigger: TCTGTGACTGGTATACAGAAGTGCTGCCTGGCAGCAGAGCTGGTGTGGACCGTGCCCATGCCTGGAGGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | AGGAGACTGATTGCTCTCCAAGTCCAGGCCTCACCTTaGAGCCAGATCCCCTATGGCCCTACCCAGGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRLIALQVQASP*SQIPYGPTQVQ Trigger: CTGCACCTGGGTAGGGCCATAGGGGATCTGGCTGCAAGGTGAGGCCTGGACTTGGAGAGCAATCAGTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR TCA 72 bp | CAGAGAAGACACCAGCTATGTCAGCAGGAGGCCATGTaGCCGCCCACACAGGGATGTAGCCTCTTGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QRRHQLCQQEAM*PPTQGCSLLQV Trigger: CACCTGCAAGAGGCTACATCCCTGTGTGGGCGGTCACATGGCCTCCTGCTGACATAGCTGGTGTCTTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | TCTGCCACTGCCTTAACCCAAGCCCTAGACCCACAATaGCAAGCAAAGGCTCAGAGGGACCACGTGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SATALTQALDPQ*QAKAQRDHVAE Trigger: CTCTGCCACGTGGTCCCTCTGAGCCTTTGCTTGGCATTGTGGGTCTAGGGCTTGGGTTAAGGCAGTGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | AGGCCATGTGACCGCCCACACAGGGATGTAGCCTCTTaGAGGTGGGTATCCGCTTATGAGGAGCTTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPCDRPHRDVAS*RWVSAYEELPE Trigger: CTCAGGAAGCTCCTCATAAGCGGATACCCACCTGCAAGAGGCTACATCCCTGTGTGGGCGGTCACATGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | GTCAGGAAATCAAGGGCAAGGGACAGGGAGTGGAGCTaGAGGGCTGGCTCAACAGGGAAAGTTCCCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: VRKSRARDREWS*RAGSTGKVPQT Trigger: AGTCTGGGGAACTTTCCCTGTTGAGCCAGCCCTGCAGCTCCACTCCCTGTCCCTTGCCCTTGATTTCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | GTGATCCCTGTTAACACAGTGTTGCCACTGGCTCCCTaGACAGCAGGCACCACACCCAGCTGCACACAACAC | + |
|
Preference number: 3 (lower is better) Translates to: VIPVNTVLPLAP*TAGTTPSCTQH Trigger: GTGTTGTGTGCAGCTGGGTGTGGTGCCTGCTGTGCAGGGAGCCAGTGGCAACACTGTGTTAACAGGGATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | TCTCACAGTGACACAGGGAAGAATGGTTGCCCTCAGTaGGGCCCCCGACCAATCTGCCTGGGAAACAACACC | + |
|
Preference number: 3 (lower is better) Translates to: SHSDTGKNGCPQ*GPRPICLGNNT Trigger: GGTGTTGTTTCCCAGGCAGATTGGTCGGGGGCCCCACTGAGGGCAACCATTCTTCCCTGTGTCACTGTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | TGTGACCGCCCACACAGGGATGTAGCCTCTTGCAGGTaGGTATCCGCTTATGAGGAGCTTCCTGAGCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CDRPHRDVASCR*VSAYEELPEPS Trigger: GCTTGGCTCAGGAAGCTCCTCATAAGCGGATACCCACCTGCAAGAGGCTACATCCCTGTGTGGGCGGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | ATCAAGGGCAAGGGACAGGGAGTGGAGCTGCAGGGCTaGCTCAACAGGGAAAGTTCCCCAGACTCAAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IKGKGQGVELQG*LNRESSPDSRS Trigger: GCTTCTTGAGTCTGGGGAACTTTCCCTGTTGAGCCAGCCCTGCAGCTCCACTCCCTGTCCCTTGCCCTTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR-3UTR CAA 90 bp | CAACGTACGAAACACAGGCGTGACAACGAAGATGATCAAGGGGCTCAGCCCAGTGCCCCTGGGTGCAGGTaGTGCTTTGCAGGGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QRTKHRRDNEDDQGAQPSAPGCR*CFAGKE Trigger: TTCCTTCCCTGCAAAGCACAACCTGCACCCAGGGGC...ACTGGGCTGAGCCCCTTGATCATCTTCGTTGTCACGCCTGTGTTTCGTACGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
||
| 3UTR GCA 72 bp | CACTGGACTTCTGAAAGGAAAGCGCTCAAATCCCACTaGAGACCACCAGGGAGACAAGGGCAGCCCCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HWTSERKALKSH*RPPGRQGQPQD Trigger: GTCTTGGGGCTGCCCTTGTCTCCCTGGTGGTCTGCAGTGGGATTTGAGCGCTTTCCTTTCAGAAGTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | GGGTGGCACAGGTCCTGCTTTCAGAGCCCTGCACGCTaGGTCAAACTGAGTAAAAATCCTGCTGCCTACGAG | + |
|
Preference number: 3 (lower is better) Translates to: GWHRSCFQSPAR*VKLSKNPAAYE Trigger: CTCGTAGGCAGCAGGATTTTTACTCAGTTTGACGCAGCGTGCAGGGCTCTGAAAGCAGGACCTGTGCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACGTACGAAACACAGGCGTGACAACGAAGATGATCAAGGGGCTCAGCCCAGGTGCAGGTTGTGCTTaGCAGGGAAGGAAACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PNVRNTGVTTKMIKGLSPGAGCA*QGRKQG Trigger: TCCCTGTTTCCTTCCCTGCAAAGCACAACCTGCACC...TGGGCTGAGCCCCTTGATCATCTTCGTTGTCACGCCTGTGTTTCGTACGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
||
| 3UTR CCA 72 bp | ACCCACAATGCCAAGCAAAGGCTCAGAGGGACCACGTaGCAGAGGAATGGAGAAGTGCAGCAGAAGGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: THNAKQRLRGTT*QRNGEVQQKVS Trigger: GCTTACCTTCTGCTGCACTTCTCCATTCCTCTGCCACGTGGTCCCTCTGAGCCTTTGCTTGGCATTGTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR TCA 72 bp | TCAGGGCAGAGCCCATCTCTTCCTTCTGGATTAAGCTaGGAGCCCCACTGGACTTCTGAAAGGAAAGCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGQSPSLPSGLS*EPHWTSERKAL Trigger: GAGCGCTTTCCTTTCAGAAGTCCAGTGGGGCTCTCAGCTTAATCCAGAAGGAAGAGATGGGCTCTGCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR TCA 72 bp | ACACACCTAGGACACACGCCAGGAACAGGCAAACTGTaGGCAGCTACAGCGAACCCATGCCTCTGTATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: THLGHTPGTGKL*AATANPCLCMV Trigger: TACCATACAGAGGCATGGGTTCGCTGTAGCTGCTCACAGTTTGCCTGTTCCTGGCGTGTGTCCTAGGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | CAAGTGGCCACACCAGAGAGGGAGGTAGCAGGGAAGTaGCCTCACCATCTCCAAGTAGTTTATCAAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QVATPEREVAGK*PHHLQVVYQSC Trigger: GCAGCTTTGATAAACTACTTGGAGATGGTGAGGCCACTTCCCTGCTACCTCCCTCTCTGGTGTGGCCACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGACCCCAACGAAGCCTATAGGAACTAAGCTGAGGCCAGAAGGAAGACGGCCAAACCCAACATCACTGTaGAACTGGCTGATCCCAACG | + |
|
Preference number: 3 (lower is better) Translates to: ETPTKPIGTKLRPEGRRPNPTSL*NWLIPT Trigger: CGTTGGGATCAGCCAGTTCAACAGTGATGTTGGGTT...TGGCCGTCTTCCTTCTGGCCTCAGCTTAGTTCCTATAGGCTTCGTTGGGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR TCA 72 bp | TCCTTCTGGATTAAGCTGAGAGCCCCACTGGACTTCTaGAAGGAAAGCGCTCAAATCCCACTGCAGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: SFWIKLRAPLDF*KESAQIPLQTT Trigger: GGTGGTCTGCAGTGGGATTTGAGCGCTTTCCTTTCAGAAGTCCAGTGGGGCTCTCAGCTTAATCCAGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | GTCCAGATTCCCACTCATATCCAACTCAGGCATCAATaGGACTGTCTGAGCACCTTGAGCCATAGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VQIPTHIQLRHQ*DCLSTLSHSSP Trigger: TGGGCTACTATGGCTCAAGGTGCTCAGACAGTCCCATTGATGCCTGAGTTGGATATGAGTGGGAATCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | CATTATGGTTTACTTAGCGGAGAAGTTTGGGAGACCTaGCCTCAGCCCAAGCTCTCCATTCGCTGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HYGLLSGEVWET*PQPKLSIRCVR Trigger: TCTGACACAGCGAATGGAGAGCTTGGGCTGAGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCATAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR CCA 72 bp | GAAGTCACACATTATGGTTTACTTAGCGGAGAAGTTTaGGAGACCTGGCCTCAGCCCAAGCTCTCCATTCGC | + |
|
Preference number: 3 (lower is better) Translates to: EVTHYGLLSGEV*ETWPQPKLSIR Trigger: GCGAATGGAGAGCTTGGGCTGAGGCCAGGTCTCCCAAACTTCTCCGCTAAGTAAACCATAATGTGTGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR GCA 72 bp | AACAGGGAAAGTTCCCCAGACTCAAGAAGCAGGTGCTaGAAACCTGAAAGCCTTGAGCATAGCTCTATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NRESSPDSRSRC*KPESLEHSSIL Trigger: CAGGATAGAGCTATGCTCAAGGCTTTCAGGTTTGCAGCACCTGCTTCTTGAGTCTGGGGAACTTTCCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR TCA 72 bp | CTTCTGTATACCAGTCACAGAACCAAAGGGAGGGGATaGGGTCATCTGGTAACTCAGAATCAACAGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLYTSHRTKGRG*GHLVTQNQQSR Trigger: TCTGGACTGTTGATTCTGAGTTACCAGATGACCTCATCCCCTCCCTTTGGTTCTGTGACTGGTATACAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| 3UTR TCA 72 bp | ACTCTACAGAGGAAACTGTGGACTTTCTTTGAAATCTaGGTGTCTATGTCCAAGGAAGAAGTCAGGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLQRKLWTFFEI*VSMSKEEVRQS Trigger: ACTCTGCCTGACTTCTTCCTTGGACATAGACACTCAGATTTCAAAGAAAGTCCACAGTTTCCTCTGTAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| CDS-3UTR GCA 90 bp | CCTCACCAGGCACGGACAACACCACGGCACCGGCAAGACGGAAGCAGGAAGGGACTGGGGCCACAGGGCTaGGGGCCACGGTCCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHQARTTPRHRQDGSRKGLGPQG*GPRSWQ Trigger: TTGCCAGGACCGTGGCCCGCAGCCCTGTGGCCCCAG...TCCCTTCCTGCTTCCGTCTTGCCGGTGCCGTGGTGTTGTCCGTGCCTGGTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| CDS-3UTR CCA 90 bp | GACAACGAAGATGATCAAGGGGCTCAGCCCAGTGCCCCTGGGTGCAGGTTGTGCAAGGGGACCCCGAGCTaGGGCCACAGGGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DNEDDQGAQPSAPGCRLCKGTPS*GHRAAG Trigger: GCCCGCAGCCCTGTGGCCCCAGCTCGGGGTCCCCTT...GCACAACCTGCACCCAGGGGCACTGGGCTGAGCCCCTTGATCATCTTCGTTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAATGGTGGCAGCCACCTTaGCAGGAACCAGGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERKRDGAANSATHLVAPQWWQPP*QEPGAP Trigger: TGGGGCCCCTGGTTCCTGGCAAGGTGGCTGCCACCA...TTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCACCTCGTCGGTCAAGCTaGTGCCATTCTCGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGCQLCHAPSGPSKTCLAPRRSS*CHSRLA Trigger: AGCCAGGCGAGAATGGCACCAGCTTGACCGACGAGG...TGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGAAGGGGACCCCGAGCTaGGGCCACAGGGCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGNERKRDGAANSATHLVKGTPS*GHRAAG Trigger: GCCCGCAGCCCTGTGGCCCCAGCTCGGGGTCCCCTT...CACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTTGGTGGCAGCCACCTTaGCAGGAACCAGGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLCHAPSGPSKTCLATARWWQPP*QEPGAP Trigger: TGGGGCCCCTGGTTCCTGGCAAGGTGGCTGCCACCA...ACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAGCTGCTTCAGCTGGATaGTCTCTTCCTTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGCQLCHAPSGPSKTCLAAASAG*SLPWRG Trigger: GCCTCTCCAAGGAAGAGATCATCCAGCTGAAGCAGC...TGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGACAGGGAGTGGAGCTGCAGGGCTGGCTCAACAGGGAAAGTTCCCCAGCCTCGTCGGTCAAGCTaGTGCCATTCTCGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARDREWSCRAGSTGKVPQPRRSS*CHSRLA Trigger: AGCCAGGCGAGAATGGCACCAGCTTGACCGACGAGG...CTGGGGAACTTTCCCTGTTGAGCCAGCCCTGCAGCTCCACTCCCTGTCCCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAACCTCGTCGGTCAAGCTaGTGCCATTCTCGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERKRDGAANSATHLVAPQPRRSS*CHSRLA Trigger: AGCCAGGCGAGAATGGCACCAGCTTGACCGACGAGG...TTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACCATGGTTCCTGCCCCAGTGCCCAGGCTGGTGGCCTATTCACCCAGGGCTCCAGCTTCATGCTaGCATTCTCCGAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTMVPAPVPRLVAYSPRAPASC*HSPRPA Trigger: AGCTGGCCTCGGAGAATGCCAGCATGAAGCTGGAGC...CCTGGGTGAATAGGCCACCAGCCTGGGCACTGGGGCAGGAACCATGGTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| CDS-3UTR CCA 90 bp | TGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCATGCGGGCCACGGTCCTaGCAAAGTTCTGCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQLCHAPSGPSKTCLATACGPRS*QSSAGP Trigger: AGGCCCTGCAGAACTTTGCCAGGACCGTGGCCCGCA...TGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| 3UTR CAA 72 bp | TGGGGAAGAACAGACCTGGCCCTAGGGCCAAAGCCCTaGTCTGGCGATGGTGGAGGCCTCCAGGCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: WGRTDLALGPKP*SGDGGGLQALT Trigger: TGTGAGAGCCTGGAGGCCTCCACCATCGCCAGACAAGGGCTTTGGCCCTAGGGCCAGGTCTGTTCTTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGTCCGAGCTCCAGCTTCATaGTGGCATTCTCCGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCHAPSGPSKTCLATARVRAPAS*WHSPRP Trigger: TGGCCTCGGAGAATGCCAGCATGAAGCTGGAGCTCG...GACACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTATGGTGGCAGCCACCTTaGCAGGAACCAGGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGNERKRDGAANSATHLWWQPP*QEPGAP Trigger: TGGGGCCCCTGGTTCCTGGCAAGGTGGCTGCCACCA...TAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| 3UTR CAA 72 bp | CACCTTCCACCCACACTCATAACCGGCGATTCGGTCTaGTCCGGTGCACTGTGCCAGGCTCCAGCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPPTLITGDSV*SGALCQAPAPW Trigger: CCATGGTGCTGGAGCCTGGCACAGTGCACCGGACAAGACCGAATCGCCGGTTATGAGTGTGGGTGGAAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGTCCTGGCAAAGTTCTaGAGGGCCTCGTACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRDGAANSATHLVAPQRPVLAKF*RASYLE Trigger: CTCCAAGTACGAGGCCCTGCAGAACTTTGCCAGGAC...AGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR CCA 90 bp | AACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGGCTCCAGCTTCATGCTaGCATTCTCCGAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSATHLVAPQRPAWQLHVAPASC*HSPRPA Trigger: AGCTGGCCTCGGAGAATGCCAGCATGAAGCTGGAGC...CACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGTGCGGGCCACGGTCCTaGCAAAGTTCTGCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGNERKRDGAANSATHLVCGPRS*QSSAGP Trigger: AGGCCCTGCAGAACTTTGCCAGGACCGTGGCCCGCA...CACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR TCA 90 bp | AACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGGCTGCTTCAGCTGGATaGTCTCTTCCTTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSATHLVAPQRPAWQLHVAASAG*SLPWRG Trigger: GCCTCTCCAAGGAAGAGATCATCCAGCTGAAGCAGC...CACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGCGAGCTCCAGCTTCATaGTGGCATTCTCCGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGNERKRDGAANSATHLVRAPAS*WHSPRP Trigger: TGGCCTCGGAGAATGCCAGCATGAAGCTGGAGCTCG...CACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR GCA 90 bp | GTGACAACGAAGATGATCAAGGGGCTCAGCCCAGTGCCCCTGGGTGCAGGTTGTGTCCTGGCAAAGTTCTaGAGGGCCTCGTACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VTTKMIKGLSPVPLGAGCVLAKF*RASYLE Trigger: CTCCAAGTACGAGGCCCTGCAGAACTTTGCCAGGAC...ACAACCTGCACCCAGGGGCACTGGGCTGAGCCCCTTGATCATCTTCGTTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
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| CDS-3UTR CCA 90 bp | AACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGCTCCGCTGCTTCAGCTaGATGATCTCTTCCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NSATHLVAPQRPAWQLHVLRCFS*MISSLE Trigger: CTCCAAGGAAGAGATCATCCAGCTGAAGCAGCGGAG...CACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CCA 90 bp | TACTACTCCTGTTTAACACATACCCAGCCGCAGCCTCCTCTTCCTCATCCTCCCTGCGGGCCACGGTCCTaGCAAAGTTCTGCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: YYSCLTHTQPQPPLPHPPCGPRS*QSSAGP Trigger: AGGCCCTGCAGAACTTTGCCAGGACCGTGGCCCGCA...GGGAGGATGAGGAAGAGGAGGCTGCGGCTGGGTATGTGTTAAACAGGAGTAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| CDS-3UTR TCA 90 bp | AAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGCTGCTTCAGCTGGATaGTCTCTTCCTTGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KGNERKRDGAANSATHLVAASAG*SLPWRG Trigger: GCCTCTCCAAGGAAGAGATCATCCAGCTGAAGCAGC...CACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CCA 90 bp | CAACGTACGAAACACAGGCGTGACAACGAAGATGATCAAGGGGCTCAGCCCAGTGCTCCAGCTTCATGCTaGCATTCTCCGAGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QRTKHRRDNEDDQGAQPSAPASC*HSPRPA Trigger: AGCTGGCCTCGGAGAATGCCAGCATGAAGCTGGAGC...ACTGGGCTGAGCCCCTTGATCATCTTCGTTGTCACGCCTGTGTTTCGTACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
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| 3UTR CAA 72 bp | ATCCAACTCAGGCATCAATGGGACTGTCTGAGCACCTaGAGCCATAGTAGCCCACCAAAACGCCAGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IQLRHQWDCLST*SHSSPPKRQGG Trigger: GCCACCCTGGCGTTTTGGTGGGCTACTATGGCTCAAGGTGCTCAGACAGTCCCATTGATGCCTGAGTTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| CDS-3UTR CCA 90 bp | CCCAACGTACGAAACACAGGCGTGACAACGAAGATGATCAAGGGGCTCAGCCCACTCCGCTGCTTCAGCTaGATGATCTCTTCCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PNVRNTGVTTKMIKGLSPLRCFS*MISSLE Trigger: CTCCAAGGAAGAGATCATCCAGCTGAAGCAGCGGAG...TGGGCTGAGCCCCTTGATCATCTTCGTTGTCACGCCTGTGTTTCGTACGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
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| 3UTR CAA 72 bp | CACACTTCCAGAGACACCCGTGCTATATTAATGCCGTaGCTCCAGGGGCAGGGTACGTATGTGTGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HTSRDTRAILMP*LQGQGTYVCSW Trigger: CCAGCTACACACATACGTACCCTGCCCCTGGAGCAACGGCATTAATATAGCACGGGTGTCTCTGGAAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| 3UTR CAA 72 bp | CAGACTCAAGAAGCAGGTGCTGCAAACCTGAAAGCCTaGAGCATAGCTCTATCCTGTTCAGAAGCAAAGACC | + |
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Preference number: 4 (lower is better) Translates to: QTQEAGAANLKA*SIALSCSEAKT Trigger: GGTCTTTGCTTCTGAACAGGATAGAGCTATGCTCAAGGCTTTCAGGTTTGCAGCACCTGCTTCTTGAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| CDS-3UTR CAA 90 bp | AAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTTGCAGGGCCTCGTACTaGGAGCGCAGGGCATCGAGC | + |
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Preference number: 5 (lower is better) Translates to: KRDGAANSATHLVAPQRPCRASY*ERRASS Trigger: GCTCGATGCCCTGCGCTCCAAGTACGAGGCCCTGCA...AGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | TGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCATGCAGGGCCTCGTACTaGGAGCGCAGGGCATCGAGC | + |
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Preference number: 5 (lower is better) Translates to: CQLCHAPSGPSKTCLATACRASY*ERRASS Trigger: GCTCGATGCCCTGCGCTCCAAGTACGAGGCCCTGCA...TGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTACTGGTGGCAGCCACCTaGCCAGGAACCAGGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RKGNERKRDGAANSATHLLVAAT*PGTRGP Trigger: GGGGCCCCTGGTTCCTGGCAAGGTGGCTGCCACCAG...TAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCCAACCCACAAGGGAGGGCCCTGGGGCGGAGACCCCAACGAAGCCTATATGGATGATCTCTTCCTaGGAGAGGCCTCGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VSQPTREGPGAETPTKPIWMISS*ERPRRC Trigger: GCACCTGCGAGGCCTCTCCAAGGAAGAGATCATCCA...TATAGGCTTCGTTGGGGTCTCCGCCCCAGGGCCCTCCCTTGTGGGTTGGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| CDS-3UTR CAA 90 bp | CCCAACGTACGAAACACAGGCGTGACAACGAAGATGATCAAGGGGCTCAGCCCACTGGTGGCAGCCACCTaGCCAGGAACCAGGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PNVRNTGVTTKMIKGLSPLVAAT*PGTRGP Trigger: GGGGCCCCTGGTTCCTGGCAAGGTGGCTGCCACCAG...TGGGCTGAGCCCCTTGATCATCTTCGTTGTCACGCCTGTGTTTCGTACGTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTATGCAGGGCCTCGTACTaGGAGCGCAGGGCATCGAGC | + |
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Preference number: 5 (lower is better) Translates to: RKGNERKRDGAANSATHLCRASY*ERRASS Trigger: GCTCGATGCCCTGCGCTCCAAGTACGAGGCCCTGCA...TAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGTGGATGATCTCTTCCTaGGAGAGGCCTCGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: NSATHLVAPQRPAWQLHVWMISS*ERPRRC Trigger: GCACCTGCGAGGCCTCTCCAAGGAAGAGATCATCCA...CACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCCCAAGCTCTCCATTCGCTGTGTCAGAAAGTCAAACACAACACCCTCACCTGGTGGCAGCCACCTaGCCAGGAACCAGGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LSPSSPFAVSESQTQHPHLVAAT*PGTRGP Trigger: GGGGCCCCTGGTTCCTGGCAAGGTGGCTGCCACCAG...GTGAGGGTGTTGTGTTTGACTTTCTGACACAGCGAATGGAGAGCTTGGGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058162.14 |
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| CDS-3UTR CAA 90 bp | CTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGTCGACCGAGCATCCGTCTaGGACTTTACTATTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: LCHAPSGPSKTCLATARVDRASV*DFTIVM Trigger: CATCACAATAGTAAAGTCCAAGACGGATGCTCGGTC...GACACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGACCGAGCATCCGTCTaGGACTTTACTATTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: KRDGAANSATHLVAPQRPDRASV*DFTIVM Trigger: CATCACAATAGTAAAGTCCAAGACGGATGCTCGGTC...AGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AACTCTGCCACGCACCTAGTGGCCCCTCAAAGACCTGCCTGGCAACTGCACGTGTTCACCTTTAAGGCCTaGTTTCCTTTATTGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: NSATHLVAPQRPAWQLHVFTFKA*FPLLGV Trigger: GACCCCCAATAAAGGAAACAAGGCCTTAAAGGTGAA...CACGTGCAGTTGCCAGGCAGGTCTTTGAGGGGCCACTAGGTGCGTGGCAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AAGATGATCAAGGGGCTCAGCCCAGTGCCCCTGGGTGCAGGTTGTGCTTTGCAGTTCACCTTTAAGGCCTaGTTTCCTTTATTGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KMIKGLSPVPLGAGCALQFTFKA*FPLLGV Trigger: GACCCCCAATAAAGGAAACAAGGCCTTAAAGGTGAA...CTGCAAAGCACAACCTGCACCCAGGGGCACTGGGCTGAGCCCCTTGATCATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058162.14 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGGACCGAGCATCCGTCTaGGACTTTACTATTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: KGNERKRDGAANSATHLVDRASV*DFTIVM Trigger: CATCACAATAGTAAAGTCCAAGACGGATGCTCGGTC...CACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS-3UTR CAA 90 bp | AAGGGAAATGAAAGGAAGAGGGACGGGGCTGCCAACTCTGCCACGCACCTAGTGTTCACCTTTAAGGCCTaGTTTCCTTTATTGGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KGNERKRDGAANSATHLVFTFKA*FPLLGV Trigger: GACCCCCAATAAAGGAAACAAGGCCTTAAAGGTGAA...CACTAGGTGCGTGGCAGAGTTGGCAGCCCCGTCCCTCTTCCTTTCATTTCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058162.14 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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| CDS GCA 72 bp | CCGACATGGTTACCAGCTCCTCGTCGGTCAAGCTGGTaGCATTCTCGCCTGGCTCCCGCTTCACCTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: PTWLPAPRRSSW*HSRLAPASPLR Trigger: CCTTAAAGGTGAAGCGGGAGCCAGGCGAGAATGGCACCAGCTTGACCGACGAGGAGCTGGTAACCATGTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058162.14 ENSMUST00000106180.2 ENSMUST00000106181.8 ENSMUST00000106182.8 |
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