Pregenerated sensors for MAFF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042622Ensembl transcript IDs: ENSMUST00000096350.11, ENSMUST00000163691.3, ENSMUST00000229130.2, ENSMUST00000229285.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCCAGCAGGACAGTCTCACAAGGCCACACCTAGTCCTGGGTCCTaGGAGGGTCGGAAGGGCATGCTGGCACAATCCAAAGCCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: FPAGQSHKATPSPGS*EGRKGMLAQSKASS Trigger: GGAAGAGGCTTTGGATTGTGCCAGCATGCCCTTCCGACCCTCCCAGGACCCAGGACTAGGTGTGGCCTTGTGAGACTGTCCTGCTGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 90 bp | CCCAGGGGGACAGTGATCAGCACCCTCAGACCACCACAGATACTCTaGACCAAAGTGGAAGCCGTAACTCCAGGTCACCCCACACCCACC | + |
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Preference number: 1 (lower is better) Translates to: PRGTVISTLRPPQIL*TKVEAVTPGHPTPT Trigger: GGTGGGTGTGGGGTGACCTGGAGTTACGGCTTCCACTTTGGTCCAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGTCCCCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR TCA 90 bp | TACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCCAGGGGGACAGTaGTCAGCACCCTCAGACCACCACAGATACTCTGGACCAAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: YSVGKVLGLDFPGGQ*SAPSDHHRYSGPKW Trigger: CCACTTTGGTCCAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGTCCCCCTGGGAAGTCCAGCCCTAGCACCTTCCCAACACTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 90 bp | CTCTTAGCTTGGGAAAGCCTGGCATTCCCAAGTCTCAAGCACAGTTaGGAGGTCTGCTTCCCAGCAGGACAGTCTCACAAGGCCACACCT | + |
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Preference number: 1 (lower is better) Translates to: LLAWESLAFPSLKHS*EVCFPAGQSHKATP Trigger: AGGTGTGGCCTTGTGAGACTGTCCTGCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTTGGGAATGCCAGGCTTTCCCAAGCTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR GCA 90 bp | TCACCCCACACCCACCCCATTCTCCTGCATCAGGACTGTAGTGTTTaGCTCTCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SPHTHPILLHQDCSV*LSLPVVVSIHLSLA Trigger: AGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGAGGCAAACACTACAGTCCTGATGCAGGAGAATGGGGTGGGTGTGGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 90 bp | GTGTTTGCCTCTCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTaGCTGGCCAGCTCCTCACCTCAACCCTTTGTGTCACCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: VFASLYQWSSPSIFL*LASSSPQPFVSPSL Trigger: GAGAGAAGGTGACACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGAGGCAAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 90 bp | GGAAAGGAATGTGAAGTCACTACAACGAGTGGCAGAGGAAAGGAATaGGAAGCAGAAGGAACTCAGGCACTTGAAGAAGGGAGTGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: GKECEVTTTSGRGKE*EAEGTQALEEGSGL Trigger: GAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCTTCTGCTTCCCATTCCTTTCCTCTGCCACTCGTTGTAGTGACTTCACATTCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 90 bp | ATGTGTCAACTGAGCTCCATTGATCCGTTCCAAAGACTCTTAGCTTaGGAAAGCCTGGCATTCCCAAGTCTCAAGCACAGTTGGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: MCQLSSIDPFQRLLA*ESLAFPSLKHSWEV Trigger: GACCTCCCAACTGTGCTTGAGACTTGGGAATGCCAGGCTTTCCCAAGCTAAGAGTCTTTGGAACGGATCAATGGAGCTCAGTTGACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACTTCCCAGGGGGACAGTGATCAGCACCCTCAGACCACCACAGATACTCTGCCTAGTCCTGGGTCCTaGGAGGGTCGGAAGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: WTSQGDSDQHPQTTTDTLPSPGS*EGRKGM Trigger: CATGCCCTTCCGACCCTCCCAGGACCCAGGACTAGG...CAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGTCCCCCTGGGAAGTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCGGAAGGGCATGCTGGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTTCTCCCAGTTTGGGGGCCTaGAAGAGTCAGAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GRKGMLAQSKASSTSSPSPSLGA*KSQSPG Trigger: TCCTGGGCTCTGACTCTTGCAGGCCCCCAAACTGGG...AGAAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCCAGCATGCCCTTCCGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCGGAAGGGCATGCTGGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTTCTAGGAACTCAGGCACTTaGAGAAGGGAGTGGCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: GRKGMLAQSKASSTSSPSRNSGT*RREWPP Trigger: CGGAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCT...AGAAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCCAGCATGCCCTTCCGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAGTGGAAGCCGTAACTCCAGGTCACCCCACACCCACCCCATTCTCCTGCCATCAGGTCCCAGTTTaGGGGCCTGCAAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TKVEAVTPGHPTPTPFSCHQVPV*GPARVR Trigger: TCTGACTCTTGCAGGCCCCCAAACTGGGACCTGATG...GCAGGAGAATGGGGTGGGTGTGGGGTGACCTGGAGTTACGGCTTCCACTTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCACACCCACCCCATTCTCCTGCATCAGGACTGTAGTGTTTGCCTCTCTCTAAGGAACTCAGGCACTTaGAGAAGGGAGTGGCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: PHTHPILLHQDCSVCLSLRNSGT*RREWPP Trigger: CGGAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCT...TAGAGAGAGGCAAACACTACAGTCCTGATGCAGGAGAATGGGGTGGGTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTTCTGGCCACACGACCTCATTAGGAACTCAGGCACTTaGAGAAGGGAGTGGCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: GTIQSLFHQLSFWPHDLIRNSGT*RREWPP Trigger: CGGAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCT...AATGAGGTCGTGTGGCCAGAAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR GCA 90 bp | TACCATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGACCCAGTTTGGGGGCCTaGAAGAGTCAGAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: YHVIQSRGTVPPVKATLGPSLGA*KSQSPG Trigger: TCCTGGGCTCTGACTCTTGCAGGCCCCCAAACTGGG...TCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGAATGCCCAGTTTGGGGGCCTaGAAGAGTCAGAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HVIQSRGTVPPVKATLGMPSLGA*KSQSPG Trigger: TCCTGGGCTCTGACTCTTGCAGGCCCCCAAACTGGG...CATTCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CAA 90 bp | ACTCTTAGCTTGGGAAAGCCTGGCATTCCCAAGTCTCAAGCACAGTaGGGAGGTCTGCTTCCCAGCAGGACAGTCTCACAAGGCCACACC | + |
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Preference number: 2 (lower is better) Translates to: TLSLGKPGIPKSQAQ*GGLLPSRTVSQGHT Trigger: GGTGTGGCCTTGTGAGACTGTCCTGCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTTGGGAATGCCAGGCTTTCCCAAGCTAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCACCGGCCTTAGGTCGTTTTaGCTGACAGCTTCCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: SLPVVVSIHLSLAGQLLTGLRSF*LTASPC Trigger: ACATGGGGAAGCTGTCAGGCAAAACGACCTAAGGCC...GGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGATACTCTGGACCAAAGTGGAAGCCGTAACTCCAGGTCACCCCACACCCGGCCTTAGGTCGTTTTaGCTGACAGCTTCCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: PQILWTKVEAVTPGHPTPGLRSF*LTASPC Trigger: ACATGGGGAAGCTGTCAGGCAAAACGACCTAAGGCC...GGGTGTGGGGTGACCTGGAGTTACGGCTTCCACTTTGGTCCAGAGTATCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCACCTCAACCCTTTGTGTCCCCATGTGTCAACTaGGCTCCATTGATCCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSPSIFLWLASSSPQPFVSPCVN*APLIRS Trigger: GGAACGGATCAATGGAGCTCAGTTGACACATGGGGA...CACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGAATGCATCAGGTCCCAGTTTaGGGGCCTGCAAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HVIQSRGTVPPVKATLGMHQVPV*GPARVR Trigger: TCTGACTCTTGCAGGCCCCCAAACTGGGACCTGATG...CATTCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCCAGGGGGACAGTGATCCCCACCCCATTCTCCTaGATCAGGACTGTAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CIQCWEGARAGLPRGTVIPTPFS*IRTVVF Trigger: AAACACTACAGTCCTGATGCAGGAGAATGGGGTGGG...GATCACTGTCCCCCTGGGAAGTCCAGCCCTAGCACCTTCCCAACACTGTATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTGGAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCATCTTTCTCTGGCTaGCCAGCTCCTCACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: ECGRVSCIQCWEGARAGLPSFSG*PAPHLN Trigger: GTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGG...AAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTCCACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTGGAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCATCCATCTTTCTCTaGCTGGCCAGCTCCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: ECGRVSCIQCWEGARAGLPSIFL*LASSSP Trigger: AGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGG...AAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTCCACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CAA 90 bp | CTCTTCCACCAGCTCTCCTTCTGGCCACACGACCTCATTTTCAATTaGAGCCGGACTTTCAGCCCAGGGAAACTTAGAACCCTAACGCCT | + |
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Preference number: 2 (lower is better) Translates to: LFHQLSFWPHDLIFN*SRTFSPGKLRTLTP Trigger: AGGCGTTAGGGTTCTAAGTTTCCCTGGGCTGAAAGTCCGGCTCAAATTGAAAATGAGGTCGTGTGGCCAGAAGGAGAGCTGGTGGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTTCTGGCCACACGACCTCATTAGTCACTACAACGAGTaGCAGAGGAAAGGAATGGGA | + |
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Preference number: 2 (lower is better) Translates to: GTIQSLFHQLSFWPHDLISHYNE*QRKGMG Trigger: TCCCATTCCTTTCCTCTGCCACTCGTTGTAGTGACT...AATGAGGTCGTGTGGCCAGAAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGACTTTATTCAGAAAGTCTACAAAATACTCAAGGCAGATAACTGGCTCCATCAGGTCCCAGTTTaGGGGCCTGCAAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ELDFIQKVYKILKADNWLHQVPV*GPARVR Trigger: TCTGACTCTTGCAGGCCCCCAAACTGGGACCTGATG...GAGCCAGTTATCTGCCTTGAGTATTTTGTAGACTTTCTGAATAAAGTCAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGACTTTATTCAGAAAGTCTACAAAATACTCAAGGCAGATAACTGGCTCCCATCTTTCTCTGGCTaGCCAGCTCCTCACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: ELDFIQKVYKILKADNWLPSFSG*PAPHLN Trigger: GTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGG...GAGCCAGTTATCTGCCTTGAGTATTTTGTAGACTTTCTGAATAAAGTCAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTTGACTTTATTCAGAAAGTCTACAAAATACTCAAGGCAGATAACTGGCTCTCCCCATGTGTCAACTaGGCTCCATTGATCCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ELDFIQKVYKILKADNWLSPCVN*APLIRS Trigger: GGAACGGATCAATGGAGCTCAGTTGACACATGGGGA...GAGCCAGTTATCTGCCTTGAGTATTTTGTAGACTTTCTGAATAAAGTCAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR GCA 72 bp | CACCTAGTCCTGGGTCCTGGGAGGGTCGGAAGGGCATaGTGGCACAATCCAAAGCCTCTTCCACCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: HLVLGPGRVGRA*WHNPKPLPPAL Trigger: GAGAGCTGGTGGAAGAGGCTTTGGATTGTGCCAGCATGCCCTTCCGACCCTCCCAGGACCCAGGACTAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR TCA 72 bp | GGGAAGGTGCTAGGGCTGGACTTCCCAGGGGGACAGTaGTCAGCACCCTCAGACCACCACAGATACTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GKVLGLDFPGGQ*SAPSDHHRYSG Trigger: TCCAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGTCCCCCTGGGAAGTCCAGCCCTAGCACCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 72 bp | CTAGTCCTGGGTCCTGGGAGGGTCGGAAGGGCATGCTaGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LVLGPGRVGRAC*HNPKPLPPALL Trigger: AAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCCAGCATGCCCTTCCGACCCTCCCAGGACCCAGGACTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 72 bp | GGACAGTCTCACAAGGCCACACCTAGTCCTGGGTCCTaGGAGGGTCGGAAGGGCATGCTGGCACAATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: GQSHKATPSPGS*EGRKGMLAQSK Trigger: TTTGGATTGTGCCAGCATGCCCTTCCGACCCTCCCAGGACCCAGGACTAGGTGTGGCCTTGTGAGACTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCACACCCACCCCATTCTCCTGCATCAGGACTGTAGTGTTTGCCTCTCTCTACCATCAGGTCCCAGTTaGGGGGCCTGCAAGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: PHTHPILLHQDCSVCLSLPSGPS*GACKSQ Trigger: CTGACTCTTGCAGGCCCCCAAACTGGGACCTGATGG...TAGAGAGAGGCAAACACTACAGTCCTGATGCAGGAGAATGGGGTGGGTGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | GGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTTCTGGCCACACGACCTCATTCCCAACTTAGCAAAGTaGCCCCTCCCCAGGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: GTIQSLFHQLSFWPHDLIPNLAK*PLPRAI Trigger: GATGGCCCTGGGGAGGGGCAACTTTGCTAAGTTGGG...AATGAGGTCGTGTGGCCAGAAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | CCACAGATACTCTGGACCAAAGTGGAAGCCGTAACTCCAGGTCACCCCACACCCAAGGAACTCAGGCACTaGAAGAAGGGAGTGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PQILWTKVEAVTPGHPTPKELRH*KKGVAS Trigger: GGAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCTT...GGGTGTGGGGTGACCTGGAGTTACGGCTTCCACTTTGGTCCAGAGTATCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGATCAGCACCCTCAGACCACCACAGATACTCTGGACCAAAGTGGAAGCCCCCAACTTAGCAAAGTaGCCCCTCCCCAGGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: TVISTLRPPQILWTKVEAPNLAK*PLPRAI Trigger: GATGGCCCTGGGGAGGGGCAACTTTGCTAAGTTGGG...GGCTTCCACTTTGGTCCAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCAAGTCTCAAGCACAGTaGGGAGGTCTGCTTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LSLPVVVSIHLSLAGQLLKSQAQ*GGLLPS Trigger: GCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTT...GAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | GAGTGTGGAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCATCAGGTCCCAGTTaGGGGGCCTGCAAGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: ECGRVSCIQCWEGARAGLPSGPS*GACKSQ Trigger: CTGACTCTTGCAGGCCCCCAAACTGGGACCTGATGG...AAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTCCACACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCACACCCACCCCATTCTCCTGCATCAGGACTGTAGTGTTTGCCTCTCTCTAAAGTCTCAAGCACAGTaGGGAGGTCTGCTTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PHTHPILLHQDCSVCLSLKSQAQ*GGLLPS Trigger: GCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTT...TAGAGAGAGGCAAACACTACAGTCCTGATGCAGGAGAATGGGGTGGGTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCCCAAAGACTCTTAGCTaGGGAAAGCCTGGCATTCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLPVVVSIHLSLAGQLLPKTLS*GKPGIP Trigger: GGGAATGCCAGGCTTTCCCAAGCTAAGAGTCTTTGG...GAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
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| 3UTR CCA 72 bp | TGGGAAAGCCTGGCATTCCCAAGTCTCAAGCACAGTTaGGAGGTCTGCTTCCCAGCAGGACAGTCTCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: WESLAFPSLKHS*EVCFPAGQSHK Trigger: CTTGTGAGACTGTCCTGCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTTGGGAATGCCAGGCTTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CCA 72 bp | ACAGTGATCAGCACCCTCAGACCACCACAGATACTCTaGACCAAAGTGGAAGCCGTAACTCCAGGTCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TVISTLRPPQIL*TKVEAVTPGHP Trigger: GGGGTGACCTGGAGTTACGGCTTCCACTTTGGTCCAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGAATGAAGGAACTCAGGCACTaGAAGAAGGGAGTGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HVIQSRGTVPPVKATLGMKELRH*KKGVAS Trigger: GGAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCTT...CATTCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCACACGACCTCATTTTCAATTTGAGCCGGACTTTCAGCCCAGGGAAACTTCCATCAGGTCCCAGTTaGGGGGCCTGCAAGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WPHDLIFNLSRTFSPGKLPSGPS*GACKSQ Trigger: CTGACTCTTGCAGGCCCCCAAACTGGGACCTGATGG...AAGTTTCCCTGGGCTGAAAGTCCGGCTCAAATTGAAAATGAGGTCGTGTGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCACCTCAACCCTTTGTGCCAAAGACTCTTAGCTaGGGAAAGCCTGGCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPSIFLWLASSSPQPFVPKTLS*GKPGIP Trigger: GGGAATGCCAGGCTTTCCCAAGCTAAGAGTCTTTGG...CACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCCAGGGCCAAAGACTCTTAGCTaGGGAAAGCCTGGCATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EESAVYSVGKVLGLDFPGPKTLS*GKPGIP Trigger: GGGAATGCCAGGCTTTCCCAAGCTAAGAGTCTTTGG...CCCTGGGAAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGAATGAGGCCCCACTTGGGTTaGCAGCTCAACAATTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: HVIQSRGTVPPVKATLGMRPHLG*QLNNSV Trigger: CACGGAATTGTTGAGCTGCAAACCCAAGTGGGGCCT...CATTCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGACTTCCCAGGGGGACAGTGATCAGCACCCTCAGACCACCACAGATACTCTGGTAAGAAGGCCCCACTaGGGTTTGCAGCTCAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: WTSQGDSDQHPQTTTDTLVRRPH*GLQLNN Trigger: ATTGTTGAGCTGCAAACCCAAGTGGGGCCTTCTTAC...CAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGTCCCCCTGGGAAGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCCAGGGCCTCACCTCAACCCTTaGTGTCACCTTCTCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EESAVYSVGKVLGLDFPGPHLNP*CHLLSP Trigger: AGGAGAGAGAAGGTGACACAAAGGGTTGAGGTGAGG...CCCTGGGAAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CCA 72 bp | TCTACCAGTGGTCGTCTCCATCCATCTTTCTCTGGCTaGCCAGCTCCTCACCTCAACCCTTTGTGTCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: STSGRLHPSFSG*PAPHLNPLCHL Trigger: AAGGTGACACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CCA 72 bp | TCTCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTaGCTGGCCAGCTCCTCACCTCAACCCTTTGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLYQWSSPSIFL*LASSSPQPFVS Trigger: TGACACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CCA 72 bp | TGCATCAGGACTGTAGTGTTTGCCTCTCTCTACCAGTaGTCGTCTCCATCCATCTTTCTCTGGCTGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CIRTVVFASLYQ*SSPSIFLWLAS Trigger: GCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGAGGCAAACACTACAGTCCTGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGTGGAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTAAGTCTCAAGCACAGTaGGGAGGTCTGCTTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ECGRVSCIQCWEGARAGLKSQAQ*GGLLPS Trigger: GCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTT...AAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTCCACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CCA 72 bp | GGCACAATCCAAAGCCTCTTCCACCAGCTCTCCTTCTaGCCACACGACCTCATTTTCAATTTGAGCCGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GTIQSLFHQLSF*PHDLIFNLSRT Trigger: AGTCCGGCTCAAATTGAAAATGAGGTCGTGTGGCCAGAAGGAGAGCTGGTGGAAGAGGCTTTGGATTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTCAATTTGAGCCGGACTTTCAGCCCAGGGAAACTTAGAACCCTAACGCCTCCCAACTTAGCAAAGTaGCCCCTCCCCAGGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: IFNLSRTFSPGKLRTLTPPNLAK*PLPRAI Trigger: GATGGCCCTGGGGAGGGGCAACTTTGCTAAGTTGGG...AGGCGTTAGGGTTCTAAGTTTCCCTGGGCTGAAAGTCCGGCTCAAATTGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGATCAGCACCCTCAGACCACCACAGATACTCTGGACCAAAGTGGAAGCCGTAAGAAGGCCCCACTaGGGTTTGCAGCTCAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVISTLRPPQILWTKVEAVRRPH*GLQLNN Trigger: ATTGTTGAGCTGCAAACCCAAGTGGGGCCTTCTTAC...GGCTTCCACTTTGGTCCAGAGTATCTGTGGTGGTCTGAGGGTGCTGATCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CCA 72 bp | CTGAGCTCCATTGATCCGTTCCAAAGACTCTTAGCTTaGGAAAGCCTGGCATTCCCAAGTCTCAAGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSIDPFQRLLA*ESLAFPSLKHS Trigger: ACTGTGCTTGAGACTTGGGAATGCCAGGCTTTCCCAAGCTAAGAGTCTTTGGAACGGATCAATGGAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACTTGACTTTATTCAGAAAGTCTACAAAATACTCAAGGCAGATAACTGGCTCCCTCACCTCAACCCTTaGTGTCACCTTCTCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ELDFIQKVYKILKADNWLPHLNP*CHLLSP Trigger: AGGAGAGAGAAGGTGACACAAAGGGTTGAGGTGAGG...GAGCCAGTTATCTGCCTTGAGTATTTTGTAGACTTTCTGAATAAAGTCAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCACCTCAACCCTTTGTGGTCAGCAGCAGGGGCTaGGCCCGGCGCCGACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSIFLWLASSSPQPFVVSSRG*ARRRLD Trigger: GTCAAGTCGGCGCCGGGCCCAGCCCCTGCTGCTGAC...CACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | TGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTCCCAGGGGGACAGTGATCAGTGTGCGGCGCCGCTaGTTCAGCCGCGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIQCWEGARAGLPRGTVISVRRR*FSRVTS Trigger: GGAGGTGACGCGGCTGAAGCAGCGGCGCCGCACACT...GATCACTGTCCCCCTGGGAAGTCCAGCCCTAGCACCTTCCCAACACTGTATACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGATACTCTGGACCAAAGTGGAAGCCGTAACTCCAGGTCACCCCACACCCGAGCGCGCGAAGCCCTaGAGCGCTTCACACTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQILWTKVEAVTPGHPTPERAKP*SASHLP Trigger: CGGCAAGTGTGAAGCGCTGCAGGGCTTCGCGCGCTC...GGGTGTGGGGTGACCTGGAGTTACGGCTTCCACTTTGGTCCAGAGTATCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CCA 90 bp | TACCATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGACGAGCTCCAGGCGCATaGCGGCGTTCTCGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YHVIQSRGTVPPVKATLGRAPGA*RRSRAP Trigger: TGGCGCGCGAGAACGCCGCCATGCGCCTGGAGCTCG...TCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGGAAGAGTCAGCTGTATACAGTGTTGGGAAGGTGCTAGGGCTGGACTTAGTGTGCGGCGCCGCTaGTTCAGCCGCGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECGRVSCIQCWEGARAGLSVRRR*FSRVTS Trigger: GGAGGTGACGCGGCTGAAGCAGCGGCGCCGCACACT...AAGTCCAGCCCTAGCACCTTCCCAACACTGTATACAGCTGACTCTTCCACACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTACCAGTGGTCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCGCTTCATCCGACAGGTaGGGCGTGTTCTCGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPVVVSIHLSLAGQLLASSDR*GVFSLN Trigger: GTTGAGCGAGAACACGCCGCACCTGTCGGATGAAGC...GAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGACCACTGGTAGAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CCA 90 bp | CATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGAATGTGCAGCTCCTCCTTCTaGCACACGCGCTTCACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HVIQSRGTVPPVKATLGMCSSSF*HTRFTR Trigger: CCGCGTGAAGCGCGTGTGCCAGAAGGAGGAGCTGCA...CATTCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | TCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCACCTCAACCCTTTGTGGCTTCATCCGACAGGTaGGGCGTGTTCTCGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSIFLWLASSSPQPFVASSDR*GVFSLN Trigger: GTTGAGCGAGAACACGCCGCACCTGTCGGATGAAGC...CACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCCTGCAAGAGTCAGAGCCCAGGAAAGGAATGTGAAGTCACTACAACGAGCTTCATCCGACAGGTaGGGCGTGTTCTCGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WGPARVRAQERNVKSLQRASSDR*GVFSLN Trigger: GTTGAGCGAGAACACGCCGCACCTGTCGGATGAAGC...TCGTTGTAGTGACTTCACATTCCTTTCCTGGGCTCTGACTCTTGCAGGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | TCGTCTCCATCCATCTTTCTCTGGCTGGCCAGCTCCTCACCTCAACCCTTTGTGTCCAGCTCGGACTTCTaGTTCTGCAGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSIFLWLASSSPQPFVSSSDF*FCSSSF Trigger: GAAGGAGGAGCTGCAGAAGCAGAAGTCCGAGCTGGA...CACAAAGGGTTGAGGTGAGGAGCTGGCCAGCCAGAGAAAGATGGATGGAGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTAAGGCAGCTGTAAGAAGGCCCCACTTGGGTTTGCAGCTCAACAATTCCGAGCGCGCGAAGCCCTaGAGCGCTTCACACTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FIKAAVRRPHLGLQLNNSERAKP*SASHLP Trigger: CGGCAAGTGTGAAGCGCTGCAGGGCTTCGCGCGCTC...GGAATTGTTGAGCTGCAAACCCAAGTGGGGCCTTCTTACAGCTGCCTTAATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | CATGTTATTCAGTCCCGGGGTACTGTTCCCCCTGTGAAAGCCACGCTTGGAATGTCCAGCTCGGACTTCTaGTTCTGCAGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVIQSRGTVPPVKATLGMSSSDF*FCSSSF Trigger: GAAGGAGGAGCTGCAGAAGCAGAAGTCCGAGCTGGA...CATTCCAAGCGTGGCTTTCACAGGGGGAACAGTACCCCGGGACTGAATAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAATGTGAAGTCACTACAACGAGTGGCAGAGGAAAGGAATGGGAAGCAGTGCAGCTCCTCCTTCTaGCACACGCGCTTCACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERNVKSLQRVAEERNGKQCSSSF*HTRFTR Trigger: CCGCGTGAAGCGCGTGTGCCAGAAGGAGGAGCTGCA...CTGCTTCCCATTCCTTTCCTCTGCCACTCGTTGTAGTGACTTCACATTCCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CAA 72 bp | TTGGGAAAGCCTGGCATTCCCAAGTCTCAAGCACAGTaGGGAGGTCTGCTTCCCAGCAGGACAGTCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKPGIPKSQAQ*GGLLPSRTVSQ Trigger: TTGTGAGACTGTCCTGCTGGGAAGCAGACCTCCCAACTGTGCTTGAGACTTGGGAATGCCAGGCTTTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCACACGACCTCATTTTCAATTTGAGCCGGACTTTCAGCCCAGGGAAACTTTCCAGCTCGGACTTCTaGTTCTGCAGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WPHDLIFNLSRTFSPGKLSSSDF*FCSSSF Trigger: GAAGGAGGAGCTGCAGAAGCAGAAGTCCGAGCTGGA...AAGTTTCCCTGGGCTGAAAGTCCGGCTCAAATTGAAAATGAGGTCGTGTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CCA 90 bp | GAACTTGACTTTATTCAGAAAGTCTACAAAATACTCAAGGCAGATAACTGGCTCCGAGCTCCAGGCGCATaGCGGCGTTCTCGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELDFIQKVYKILKADNWLRAPGA*RRSRAP Trigger: TGGCGCGCGAGAACGCCGCCATGCGCCTGGAGCTCG...GAGCCAGTTATCTGCCTTGAGTATTTTGTAGACTTTCTGAATAAAGTCAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CAA 72 bp | CAGCTCTCCTTCTGGCCACACGACCTCATTTTCAATTaGAGCCGGACTTTCAGCCCAGGGAAACTTAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLSFWPHDLIFN*SRTFSPGKLRT Trigger: GGTTCTAAGTTTCCCTGGGCTGAAAGTCCGGCTCAAATTGAAAATGAGGTCGTGTGGCCAGAAGGAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| 3UTR CAA 72 bp | TTCATTAAGGCAGCTGTAAGAAGGCCCCACTTGGGTTaGCAGCTCAACAATTCCGTGCTCAGTGGCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIKAAVRRPHLG*QLNNSVLSGLR Trigger: CCTAAGGCCACTGAGCACGGAATTGTTGAGCTGCAAACCCAAGTGGGGCCTTCTTACAGCTGCCTTAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGCAGAAGGAACTCAGGCACTTGAAGAAGGGAGTGGCCTCCGAGGGGTGGGGCCCGGCGCCGACTaGACGATGGTGATGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WEAEGTQALEEGSGLRGVGPGAD*TMVMTL Trigger: CAGCGTCATCACCATCGTCAAGTCGGCGCCGGGCCC...CACCCCTCGGAGGCCACTCCCTTCTTCAAGTGCCTGAGTTCCTTCTGCTTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGGAATGTGAAGTCACTACAACGAGTGGCAGAGGAAAGGAATGGGAAGCAGGGGCCCGGCGCCGACTaGACGATGGTGATGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERNVKSLQRVAEERNGKQGPGAD*TMVMTL Trigger: CAGCGTCATCACCATCGTCAAGTCGGCGCCGGGCCC...CTGCTTCCCATTCCTTTCCTCTGCCACTCGTTGTAGTGACTTCACATTCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS-3UTR CAA 90 bp | TTCATTAAGGCAGCTGTAAGAAGGCCCCACTTGGGTTTGCAGCTCAACAATTCCGGGCCCGGCGCCGACTaGACGATGGTGATGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIKAAVRRPHLGLQLNNSGPGAD*TMVMTL Trigger: CAGCGTCATCACCATCGTCAAGTCGGCGCCGGGCCC...GGAATTGTTGAGCTGCAAACCCAAGTGGGGCCTTCTTACAGCTGCCTTAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 |
||
| CDS GCA 72 bp | CGCACCGACAGCCCCATCAGCGCTTCATCCGACAGGTaGGGCGTGTTCTCGCTCAACTCGCGCTTGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RTDSPISASSDR*GVFSLNSRLTF Trigger: GAAGGTCAAGCGCGAGTTGAGCGAGAACACGCCGCACCTGTCGGATGAAGCGCTGATGGGGCTGTCGGTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 ENSMUST00000229285.2 |
||
| CDS CAA 72 bp | TCCGACAGGTGCGGCGTGTTCTCGCTCAACTCGCGCTaGACCTTCAGGGCTTTGCTAGATAAGGGATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SDRCGVFSLNSR*TFRALLDKGST Trigger: TGTGGATCCCTTATCTAGCAAAGCCCTGAAGGTCAAGCGCGAGTTGAGCGAGAACACGCCGCACCTGTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096350.11 ENSMUST00000163691.3 ENSMUST00000229130.2 ENSMUST00000229285.2 |
||