Pregenerated sensors for MAFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074622Ensembl transcript IDs: ENSMUST00000099126.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTCCCTCTCCTCTCCTCTGCTCTTCCTGGGACGAACTGAGTCCTaGGCTGCAAAGCGGCGGCCCTGGCACTCACAAAGTTCTCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: ESLSSPLLFLGRTES*AAKRRPWHSQSSQS Trigger: GCTCTGAGAACTTTGTGAGTGCCAGGGCCGCCGCTTTGCAGCCCAGGACTCAGTTCGTCCCAGGAAGAGCAGAGGAGAGGAGAGGGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR TCA 90 bp | TTCCTTCGCGCGCCGAAAGTCCTAACTGAGGCCCGCGTCTCCGGCTaGGAGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FLRAPKVLTEARVSG*EPVFSVLWTDRSVC Trigger: ACAGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCTCTCAGCCGGAGACGCGGGCCTCAGTTAGGACTTTCGGCGCGCGAAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR GCA 90 bp | CCGATGCAGGACGAATATCCACAATATTTAAAACTGCAAGCACCATaGGGTTCATACAATCTTGTTATTTACTGTAAATTGTATCAACTA | + |
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Preference number: 1 (lower is better) Translates to: PMQDEYPQYLKLQAP*GSYNLVIYCKLYQL Trigger: TAGTTGATACAATTTACAGTAAATAACAAGATTGTATGAACCGCATGGTGCTTGCAGTTTTAAATATTGTGGATATTCGTCCTGCATCGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAATTCTCTGCCCGCCCGTaGTCCCGCCTGACTCCCGCG | + |
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Preference number: 2 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQFSARP*SRLTPA Trigger: CGCGGGAGTCAGGCGGGAGCACGGGCGGGCAGAGAA...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTGCTCTCCAGACAGCTCAAGGCCGGGGCCATaGCAGGGACAGGGAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: YNGRDLNTTIKSPCSPDSSRPGP*QGQGVQ Trigger: CTGGACTCCCTGTCCCTGCCATGGCCCCGGCCTTGA...GCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTGTTTTTCCTTCCTTAGAGGCTGCGCCGCCCTaGGCTGCCCTCTTCTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: SQCSPYSGQTDLSVFPSLEAAPP*AALFLA Trigger: GGCTAAGAAGAGGGCAGCTCAGGGCGGCGCAGCCTC...TAAGGAAGGAAAAACAGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CAA 90 bp | AAACCCAAACAAAGACTCAGCTTGCTGCTACCTTCTCAAGATGGTTaGGCCGGGGCGGGTAATCTACAAGCCGGCCGGCGACTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: KPKQRLSLLLPSQDG*AGAGNLQAGRRLKL Trigger: GAGTTTCAGTCGCCGGCCGGCTTGTAGATTACCCGCCCCGGCCAAACCATCTTGAGAAGGTAGCAGCAAGCTGAGTCTTTGTTTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAACCCTCTCCTCTCCTCTaGTCTTCCTGGGACGAACTG | + |
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Preference number: 2 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQPSPLL*SSWDEL Trigger: CAGTTCGTCCCAGGAAGAGCAGAGGAGAGGAGAGGG...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCTTGTTTTCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGGCCTTCCAGCTTaGAGAAAAGTTACTCCCGGA | + |
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Preference number: 2 (lower is better) Translates to: PVLFSSCVCVCVCVCVCVRGLPA*RKVTPG Trigger: TCCGGGAGTAACTTTTCTCCAAGCTGGAAGGCCGCG...CACACACACACACACACACACACACACACACACACACGAAGAAAACAAGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTGCTCTCCAGACAGCATTCCAAACCAGCCCTaGGTTGACTTCTTAGGACGC | + |
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Preference number: 2 (lower is better) Translates to: YNGRDLNTTIKSPCSPDSIPNQP*VDFLGR Trigger: GCGTCCTAAGAAGTCAACCCAGGGCTGGTTTGGAAT...GCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAAGTGTTCTCCGTACTCTaGACAGACAGATCTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQVFSVL*TDRSVC Trigger: ACAGACAGATCTGTCTGTCCAGAGTACGGAGAACAC...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTGCTCTCCAGACAGCGTAGAGGAGCAGTCGTaGGTGTGTGTATGTCAATTT | + |
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Preference number: 2 (lower is better) Translates to: YNGRDLNTTIKSPCSPDSVEEQS*VCVCQF Trigger: AAATTGACATACACACACCCACGACTGCTCCTCTAC...GCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR GCA 72 bp | CTCTGCCCAAGTCTAAGAGGCTGCGCCGCCCTGAGCTaGCCTCTTCTTAGCCAAGGTTCTCTGCCCGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: LCPSLRGCAALS*PLLSQGSLPAR Trigger: ACGGGCGGGCAGAGAACCTTGGCTAAGAAGAGGGCAGCTCAGGGCGGCGCAGCCTCTTAGACTTGGGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CCA 72 bp | GCGACTCCTTGGAATAAGCCTCGCGGCCTTCCAGCTTaGAGAAAAGTTACTCCCGGACCTCGCACCCGCCCG | + |
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Preference number: 3 (lower is better) Translates to: ATPWNKPRGLPA*RKVTPGPRTRP Trigger: CGGGCGGGTGCGAGGTCCGGGAGTAACTTTTCTCCAAGCTGGAAGGCCGCGAGGCTTATTCCAAGGAGTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR TCA 72 bp | GCGCCGAAAGTCCTAACTGAGGCCCGCGTCTCCGGCTaGGAGCCAGTGTTCTCCGTACTCTGGACAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: APKVLTEARVSG*EPVFSVLWTDR Trigger: TCTGTCTGTCCAGAGTACGGAGAACACTGGCTCTCAGCCGGAGACGCGGGCCTCAGTTAGGACTTTCGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CCA 72 bp | GGACGAACTGAGTCCTGGGCTGCAAAGCGGCGGCCCTaGCACTCACAAAGTTCTCAGAGCCAGAAGTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: GRTESWAAKRRP*HSQSSQSQKCP Trigger: TGGACACTTCTGGCTCTGAGAACTTTGTGAGTGCCAGGGCCGCCGCTTTGCAGCCCAGGACTCAGTTCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR-3UTR CAA 90 bp | GCGTCTCCGGCTGAGAGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTTCGCGGCCTTCCAGCTaGGAGAAAAGTTACTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: ASPAESQCSPYSGQTDLSSRPSS*EKSYSR Trigger: CCGGGAGTAACTTTTCTCCAAGCTGGAAGGCCGCGA...AGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCTCTCAGCCGGAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CCA 72 bp | ACAAAGTTCTCAGAGCCAGAAGTGTCCAGACGGCCTTaGCGACTCCTTGGAATAAGCCTCGCGGCCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TKFSEPEVSRRP*RLLGISLAAFQ Trigger: CTGGAAGGCCGCGAGGCTTATTCCAAGGAGTCGCCAAGGCCGTCTGGACACTTCTGGCTCTGAGAACTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR TCA 72 bp | GACCTCCCCTATAACTACTGTACAACGGAAGGGACTTaGACACCACCATTAAGTCTCCCTGCTCTCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: DLPYNYCTTEGT*TPPLSLPALQT Trigger: TGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTACAGTAGTTATAGGGGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR GCA 72 bp | AACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTaGTCTCCAGACAGCAGAGAAACATATAATGCACTG | + |
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Preference number: 3 (lower is better) Translates to: NGRDLNTTIKSP*SPDSRETYNAL Trigger: CAGTGCATTATATGTTTCTCTGCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CCA 72 bp | TGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTaGCCCCAAGACCCAACAATAATAAAGGACACACTC | + |
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Preference number: 3 (lower is better) Translates to: CRGAVVGVCMSI*PQDPTIIKDTL Trigger: GAGTGTGTCCTTTATTATTGTTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | CCAGGGCTAGGGGCGCAGAATAGGGAGTCTGGGCCAGGGCAAGGGCGGGGGCCGCTAGTGGGTAGCTGTTaGGCGGGACTGGCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGLGAQNRESGPGQGRGPLVGSC*AGLAAL Trigger: CAGCGCTGCCAGTCCCGCGCAACAGCTACCCACTAG...CGGCCCCCGCCCTTGCCCTGGCCCAGACTCCCTATTCTGCGCCCCTAGCCCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CCA 90 bp | CCCGCGACCCGCGCGTCCTTCCTCCCTCTAGCTCAAGTCAAACAGGTCAAGGCCCCATGGCCAGCGGGCTaGTGGGCAGCTCTTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PATRASFLPLAQVKQVKAPWPAG*WAALAP Trigger: TGGGGCAAGAGCTGCCCACCAGCCCGCTGGCCATGG...GGCCTTGACCTGTTTGACTTGAGCTAGAGGGAGGAAGGACGCGCGGGTCGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | CCAGGGCTAGGGGCGCAGAATAGGGAGTCTGGGCCAGGGCAAGGGCGGGGGCCGCGAGTTTCTCGCACTTaGCCTTGTAGGCGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGLGAQNRESGPGQGRGPRVSRT*PCRRLS Trigger: AGAGAGACGCCTACAAGGTCAAGTGCGAGAAACTCG...CGGCCCCCGCCCTTGCCCTGGCCCAGACTCCCTATTCTGCGCCCCTAGCCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CCA 90 bp | CCCGCGACCCGCGCGTCCTTCCTCCCTCTAGCTCAAGTCAAACAGGTCAAGGCCAAGCTCTGCAGCGGCTaGGGCACTGGGTGCGAACCG | + |
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Preference number: 4 (lower is better) Translates to: PATRASFLPLAQVKQVKAKLCSG*GTGCEP Trigger: CGGTTCGCACCCAGTGCCCCAGCCGCTGCAGAGCTT...GGCCTTGACCTGTTTGACTTGAGCTAGAGGGAGGAAGGACGCGCGGGTCGCGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | GCGTCTCCGGCTGAGAGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTCAGGCTGCAGGCGTGTaGATGGCCGGCCCGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: ASPAESQCSPYSGQTDLSQAAGV*MAGPDA Trigger: AGCGTCCGGGCCGGCCATGCACACGCCTGCAGCCTG...AGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCTCTCAGCCGGAGACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | GCGTCTCCGGCTGAGAGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTAGCTGCACGGAGTGCTaGGCGGGGTGGACGACACCG | + |
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Preference number: 4 (lower is better) Translates to: ASPAESQCSPYSGQTDLSSCTEC*AGWTTP Trigger: CGGTGTCGTCCACCCCGCTCAGCACTCCGTGCAGCT...AGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCTCTCAGCCGGAGACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | CCCGCGACCCGCGCGTCCTTCCTCCCTCTAGCTCAAGTCAAACAGGTCAAGGCCGCTCCACCTGCTGAATaGGCTGCGTCTTCTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PATRASFLPLAQVKQVKAAPPAE*AASSRS Trigger: AGAACGAGAAGACGCAGCTCATTCAGCAGGTGGAGC...GGCCTTGACCTGTTTGACTTGAGCTAGAGGGAGGAAGGACGCGCGGGTCGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CCA 90 bp | TACAACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTGCTCTCCAGACAGCCTGCAGGCGTGTGCATaGCCGGCCCGGACGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: YNGRDLNTTIKSPCSPDSLQACA*PARTLR Trigger: GCGGAGCGTCCGGGCCGGCCATGCACACGCCTGCAG...GCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAAGCTGTTGCGCGGGACTaGCAGCGCTGGACGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQAVARD*QRWTAG Trigger: CCCCGCCGTCCAGCGCTGCCAGTCCCGCGCAACAGC...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAACTGGGTGCGAACCGATaGGCGCCTCCACCGCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQLGANR*APPPRP Trigger: AGGACGCGGTGGAGGCGCTCATCGGTTCGCACCCAG...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAAACCGAGCCAGCAGGCTaGAGGCGTGTGCATGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQTEPAG*RRVHGR Trigger: CCGGCCATGCACACGCCTGCAGCCTGCTGGCTCGGT...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CCA 90 bp | TGTGTAGAGGAGCAGTCGTGGGTGTGTGTATGTCAATTTGGCCCCAAGACCCAACAGCGGCTGGGGCACTaGGTGCGAACCGATGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: CVEEQSWVCVCQFGPKTQQRLGH*VRTDER Trigger: GCGCTCATCGGTTCGCACCCAGTGCCCCAGCCGCTG...TTGGGTCTTGGGGCCAAATTGACATACACACACCCACGACTGCTCCTCTACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | GCGTCTCCGGCTGAGAGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTAGCTGCTCCACCTGCTaGATGAGCTGCGTCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: ASPAESQCSPYSGQTDLSSCSTC*MSCVFS Trigger: CGAGAAGACGCAGCTCATTCAGCAGGTGGAGCAGCT...AGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCTCTCAGCCGGAGACGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | TACAACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTGCTCTCCAGACAGCTGGAGCCCGCCTCCCTaGAGCCGGAGTTGGCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: YNGRDLNTTIKSPCSPDSWSPPP*SRSWRV Trigger: AACTCGCCAACTCCGGCTTCAGGGAGGCGGGCTCCA...GCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CCA 90 bp | TGGCCCCAAGACCCAACAATAATAAAGGACACACTCCTGCACGATGTGGATCTCTGGCCAGCGGGCTGGTaGGCAGCTCTTGCCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: WPQDPTIIKDTLLHDVDLWPAGW*AALAPC Trigger: GCATGGGGCAAGAGCTGCCCACCAGCCCGCTGGCCA...GAGATCCACATCGTGCAGGAGTGTGTCCTTTATTATTGTTGGGTCTTGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CAA 72 bp | CAAAGACTCAGCTTGCTGCTACCTTCTCAAGATGGTTaGGCCGGGGCGGGTAATCTACAAGCCGGCCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QRLSLLLPSQDG*AGAGNLQAGRR Trigger: TCGCCGGCCGGCTTGTAGATTACCCGCCCCGGCCAAACCATCTTGAGAAGGTAGCAGCAAGCTGAGTCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | CCTGTCTTGTTTTCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCTGGGGCACTGGGTaGGAACCGATGAGCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVLFSSCVCVCVCVCVCVGWGTG*EPMSAS Trigger: GGAGGCGCTCATCGGTTCGCACCCAGTGCCCCAGCC...CACACACACACACACACACACACACACACACACACACGAAGAAAACAAGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CAA 72 bp | CACAAAGTTCTCAGAGCCAGAAGTGTCCAGACGGCCTaGGCGACTCCTTGGAATAAGCCTCGCGGCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HKVLRARSVQTA*ATPWNKPRGLP Trigger: TGGAAGGCCGCGAGGCTTATTCCAAGGAGTCGCCAAGGCCGTCTGGACACTTCTGGCTCTGAGAACTTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| 3UTR CAA 72 bp | CTGAAACTCTGCTCGCTCGCTCGCAGCCGCAGGAGTTaGGGAACTGCATCCCTTCTCACCCAAAGAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: LKLCSLARSRRS*GTASLLTQRNK Trigger: CTTGTTTCTTTGGGTGAGAAGGGATGCAGTTCCCAAACTCCTGCGGCTGCGAGCGAGCGAGCAGAGTTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | CCTGTCTTGTTTTCTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCCAGGTCATCGTaGGTCACACCTGCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PVLFSSCVCVCVCVCVCVWPRSS*VTPAPG Trigger: CCCAGGAGCAGGTGTGACTCACGATGACCTGGGCCA...CACACACACACACACACACACACACACACACACACACGAAGAAAACAAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | TGGCCCCAAGACCCAACAATAATAAAGGACACACTCCTGCACGATGTGGATCTCGGGCGTCAGGTTGAGTaGCTCGGGGTTCATCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: WPQDPTIIKDTLLHDVDLGRQVE*LGVHLL Trigger: CAGCAGATGAACCCCGAGGCACTCAACCTGACGCCC...GAGATCCACATCGTGCAGGAGTGTGTCCTTTATTATTGTTGGGTCTTGGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | TGGCCCCAAGACCCAACAATAATAAAGGACACACTCCTGCACGATGTGGATCTCGGACGCGTTTATACCTaGACGACTGGGCGTAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: WPQDPTIIKDTLLHDVDLGRVYT*TTGRSP Trigger: GGGGCTACGCCCAGTCGTGCAGGTATAAACGCGTCC...GAGATCCACATCGTGCAGGAGTGTGTCCTTTATTATTGTTGGGTCTTGGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | AGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTGTTTTTCCTTCCTTAAGCCGGGACACCTCCTaGTTAAGCTGCTCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SQCSPYSGQTDLSVFPSLSRDTS*LSCSTC Trigger: GCAGGTGGAGCAGCTTAAGCAGGAGGTGTCCCGGCT...TAAGGAAGGAAAAACAGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR TCA 90 bp | AGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTGTTTTTCCTTCCTTATCGGTTCAGTCGGACTaGAGCTGGGAGAAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SQCSPYSGQTDLSVFPSLSVQSD*SWEKKA Trigger: TGCCTTCTTCTCCCAGCTTCAGTCCGACTGAACCGA...TAAGGAAGGAAAAACAGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR GCA 90 bp | AGCCAGTGTTCTCCGTACTCTGGACAGACAGATCTGTCTGTTTTTCCTTCCTTATCATCTGCTGGTAGTTaGTCGCCATCCAGTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SQCSPYSGQTDLSVFPSLSSAGS*SPSSTG Trigger: ACCTGTACTGGATGGCGAGCAACTACCAGCAGATGA...TAAGGAAGGAAAAACAGACAGATCTGTCTGTCCAGAGTACGGAGAACACTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS CCA 90 bp | CCCGCAGCCGTCGCCGCGGCTGTTGCGTGCGGTCCCGGCCCCGGGTaGCTAGTGGGTAGCTGTTGCGCGGGACTGGCAGCGCTGGACGGC | + |
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Preference number: 5 (lower is better) Translates to: PAAVAAAVACGPGPG*LVGSCCAGLAALDG Trigger: GCCGTCCAGCGCTGCCAGTCCCGCGCAACAGCTACCCACTAGCCACCCGGGGCCGGGACCGCACGCAACAGCCGCGGCGACGGCTGCGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS GCA 90 bp | TCCACACTACCGTTGCCGCCCGCAGCCGTCGCCGCGGCTGTTGCGTaGGGTCCCGGCCCCGGGTGGCTAGTGGGTAGCTGTTGCGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: STLPLPPAAVAAAVA*GPGPGWLVGSCCAG Trigger: TCCCGCGCAACAGCTACCCACTAGCCACCCGGGGCCGGGACCGCACGCAACAGCCGCGGCGACGGCTGCGGGCGGCAACGGTAGTGTGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CAA 90 bp | TGGCCCCAAGACCCAACAATAATAAAGGACACACTCCTGCACGATGTGGATCTCGCTGGTGGGCAGCTCTaGCCCCATGCTCAGCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: WPQDPTIIKDTLLHDVDLAGGQL*PHAQLR Trigger: GCGGAGCTGAGCATGGGGCAAGAGCTGCCCACCAGC...GAGATCCACATCGTGCAGGAGTGTGTCCTTTATTATTGTTGGGTCTTGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CAA 90 bp | TGGCCCCAAGACCCAACAATAATAAAGGACACACTCCTGCACGATGTGGATCTCCGGCGGGGGCGACGCTaGGTGATGATGGTGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: WPQDPTIIKDTLLHDVDLRRGRR*VMMVMV Trigger: CACCATCACCATCATCACCAAGCGTCGCCCCCGCCG...GAGATCCACATCGTGCAGGAGTGTGTCCTTTATTATTGTTGGGTCTTGGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS-3UTR CAA 90 bp | TACAACGGAAGGGACTTGAACACCACCATTAAGTCTCCCTGCTCTCCAGACAGCTCCCTGAAGCCGGAGTaGGCGAGTTTCTCGCACTTG | + |
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Preference number: 5 (lower is better) Translates to: YNGRDLNTTIKSPCSPDSSLKPE*ASFSHL Trigger: CAAGTGCGAGAAACTCGCCAACTCCGGCTTCAGGGA...GCTGTCTGGAGAGCAGGGAGACTTAATGGTGGTGTTCAAGTCCCTTCCGTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS CCA 72 bp | GGACGACACCGAGCCAGCAGGCTGCAGGCGTGTGCATaGCCGGCCCGGACGCTCCGCGCGCCCCAGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GRHRASRLQACA*PARTLRAPQGL Trigger: GAGCCCCTGGGGCGCGCGGAGCGTCCGGGCCGGCCATGCACACGCCTGCAGCCTGCTGGCTCGGTGTCGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS GCA 72 bp | CCGTTGCCGCCCGCAGCCGTCGCCGCGGCTGTTGCGTaGGGTCCCGGCCCCGGGTGGCTAGTGGGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLPPAAVAAAVA*GPGPGWLVGSC Trigger: ACAGCTACCCACTAGCCACCCGGGGCCGGGACCGCACGCAACAGCCGCGGCGACGGCTGCGGGCGGCAACGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS CCA 72 bp | GTCGCCGCGGCTGTTGCGTGCGGTCCCGGCCCCGGGTaGCTAGTGGGTAGCTGTTGCGCGGGACTGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: VAAAVACGPGPG*LVGSCCAGLAA Trigger: CGCTGCCAGTCCCGCGCAACAGCTACCCACTAGCCACCCGGGGCCGGGACCGCACGCAACAGCCGCGGCGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS GCA 72 bp | GCTGGTCATCAGAGAAGCGGTCCTCCACACTACCGTTaGCGCCCGCAGCCGTCGCCGCGGCTGTTGCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: AGHQRSGPPHYR*RPQPSPRLLRA Trigger: CGCACGCAACAGCCGCGGCGACGGCTGCGGGCGGCAACGGTAGTGTGGAGGACCGCTTCTCTGATGACCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS CCA 72 bp | TGCGCACTACGGAAGCCGTCGAAGCTCTGCAGCGGCTaGGGCACTGGGTGCGAACCGATGAGCGCCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CALRKPSKLCSG*GTGCEPMSAST Trigger: GGTGGAGGCGCTCATCGGTTCGCACCCAGTGCCCCAGCCGCTGCAGAGCTTCGACGGCTTCCGTAGTGCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS GCA 72 bp | GTGAGCGTGCTGGCCCAGGTCATCGTGAGTCACACCTaGTCCTGGGTACCCGTGGTGCGGATGAGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VSVLAQVIVSHT*SWVPVVRMRVV Trigger: CACCACCCTCATCCGCACCACGGGTACCCAGGAGCAGGTGTGACTCACGATGACCTGGGCCAGCACGCTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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| CDS GCA 72 bp | TCTCCAGGTGATGTTTCTGCTGGACGCGTTTATACCTaGACGACTGGGCGTAGCCCCGGTTCTTCAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SPGDVSAGRVYT*TTGRSPGSSGS Trigger: GGACCCTGAAGAACCGGGGCTACGCCCAGTCGTGCAGGTATAAACGCGTCCAGCAGAAACATCACCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099126.5 |
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