Pregenerated sensors for MAF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055435Ensembl transcript IDs: ENSMUST00000069009.7, ENSMUST00000109104.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTCCCTCCCCAATTCAAAAGAGCCATCACCACCACCACAAGCTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LSLPNSKEPSPPPQA*CVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACACACCAAGCTTGTGGTGGTGGTGATGGCTCTTTTGAATTGGGGAGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR TCA 90 bp | TACAGGCAATTGATGGCCCGGTTCAAAGGTGAGCTATGCCCTACATaGAGTATGCTGCTCAGATCTTTGACCCTTGTGCAAGTCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: YRQLMARFKGELCPT*SMLLRSLTLVQVQG Trigger: ACCCTGGACTTGCACAAGGGTCAAAGATCTGAGCAGCATACTTCATGTAGGGCATAGCTCACCTTTGAACCGGGCCATCAATTGCCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR GCA 90 bp | ACCATTAAATGCATATGTTCCCATGCACCTCTGGTGAGCCAGACTTaGTGGTCCCAGTCCCTCTATCTGTGCTCCTTCGTCAGAAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: TIKCICSHAPLVSQT*WSQSLYLCSFVRSL Trigger: TAAGCTTCTGACGAAGGAGCACAGATAGAGGGACTGGGACCAGCAAGTCTGGCTCACCAGAGGTGCATGGGAACATATGCATTTAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CCA 90 bp | CCTATACTTGTTTCAAGGACTGAAGATGACATACGTTCTGGCTCCTaGGAGACTGGCTCCTCAGTAGCTTCTCACCATACCCATCGACTC | + |
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Preference number: 1 (lower is better) Translates to: PILVSRTEDDIRSGS*ETGSSVASHHTHRL Trigger: GAGTCGATGGGTATGGTGAGAAGCTACTGAGGAGCCAGTCTCCCAGGAGCCAGAACGTATGTCATCTTCAGTCCTTGAAACAAGTATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR CCA 90 bp | TCAAGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTaGTGGGGGTGTTTACCCAGTGCAGGTGTTTTACATATATTAACA | + |
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Preference number: 1 (lower is better) Translates to: SRSEFHPCNTVHGGT*WGCLPSAGVLHILT Trigger: TGTTAATATATGTAAAACACCTGCACTGGGTAAACACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR TCA 90 bp | ATTTGGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTaGTGTAGGCTTGATTGTGGCAGGTTCAGGAGTGGCTTTAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: IWHHKAKTHKSHPEG*CRLDCGRFRSGFSS Trigger: TGAACTAAAGCCACTCCTGAACCTGCCACAATCAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR TCA 90 bp | TATTTGCCTAAACTCTTTCTTCTGGTGCTGAGCTTTGGGTCCAAGTaGTATACCCATTTCCTCCTCGCCAGACTGGTAATGTGTGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: YLPKLFLLVLSFGSK*YTHFLLARLVMCAY Trigger: ATAGGCACACATTACCAGTCTGGCGAGGAGGAAATGGGTATATCACTTGGACCCAAAGCTCAGCACCAGAAGAAAGAGTTTAGGCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CCA 90 bp | AGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTaGGGGTGTTTACCCAGTGCAGGTGTTTTACATATATTAACATAT | + |
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Preference number: 1 (lower is better) Translates to: RSEFHPCNTVHGGTW*GCLPSAGVLHILTY Trigger: ATATGTTAATATATGTAAAACACCTGCACTGGGTAAACACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR GCA 90 bp | AAATTTGTAGCCCATTCTGCTATCTTTGACAAGGAACGCCTTCAGTaGATGTACAACGGGAGGCTGAAGTTCATTGTAACTCAAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: KFVAHSAIFDKERLQ*MYNGRLKFIVTQSS Trigger: ACTGCTTTGAGTTACAATGAACTTCAGCCTCCCGTTGTACATGCACTGAAGGCGTTCCTTGTCAAAGATAGCAGAATGGGCTACAAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR GCA 90 bp | GTCCAAGTGATATACCCATTTCCTCCTCGCCAGACTGGTAATGTGTaGCTATTTTCTGGCTGTAGTCAGATGATGAAAATCTCTAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: VQVIYPFPPRQTGNV*LFSGCSQMMKISKA Trigger: AGCTTTAGAGATTTTCATCATCTGACTACAGCCAGAAAATAGGCACACATTACCAGTCTGGCGAGGAGGAAATGGGTATATCACTTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR GCA 90 bp | TCAATTTTGGCCAAACGGCAAGAATTATTTATCTTTACCATTAAATaGATATGTTCCCATGCACCTCTGGTGAGCCAGACTTGCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SILAKRQELFIFTIK*ICSHAPLVSQTCWS Trigger: GGACCAGCAAGTCTGGCTCACCAGAGGTGCATGGGAACATATGCATTTAATGGTAAAGATAAATAATTCTTGCCGTTTGGCCAAAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CCA 90 bp | TATGCTGCTCAGATCTTTGACCCTTGTGCAAGTCCAGGGTATGTGTaGGGCAGGCGGTGTAAAAAGAGTAGTAGTTGTAATAATAATAAT | + |
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Preference number: 1 (lower is better) Translates to: YAAQIFDPCASPGYV*GRRCKKSSSCNNNN Trigger: ATTATTATTATTACAACTACTACTCTTTTTACACCGCCTGCCCCACACATACCCTGGACTTGCACAAGGGTCAAAGATCTGAGCAGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR GCA 90 bp | CTCTTTGATAAACAACTGCGACCATCGTGTTACAAATGCCTCTTGTaGCTAAGAATATATTTGCCTAAACTCTTTCTTCTGGTGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: LFDKQLRPSCYKCLL*LRIYLPKLFLLVLS Trigger: GCTCAGCACCAGAAGAAAGAGTTTAGGCAAATATATTCTTAGGCACAAGAGGCATTTGTAACACGATGGTCGCAGTTGTTTATCAAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR GCA 90 bp | CAGGTCTTACTCTTTGATAAACAACTGCGACCATCGTGTTACAAATaGCTCTTGTGCCTAAGAATATATTTGCCTAAACTCTTTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: QVLLFDKQLRPSCYK*LLCLRIYLPKLFLL Trigger: CAGAAGAAAGAGTTTAGGCAAATATATTCTTAGGCACAAGAGGCATTTGTAACACGATGGTCGCAGTTGTTTATCAAAGAGTAAGACCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CCA 90 bp | TATTCTGATGGTGCTGTCTCATTTTCTAATGTCCAGGGCCCAAACTaGCTTCTGATATTGAACTGCTTTATAGAACTCTATCAAAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: YSDGAVSFSNVQGPN*LLILNCFIELYQSD Trigger: ATCACTTTGATAGAGTTCTATAAAGCAGTTCAATATCAGAAGCCAGTTTGGGCCCTGGACATTAGAAAATGAGACAGCACCATCAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CCA 90 bp | GCTTTAATACTTAGGCAATCATATTTTCTCTCTCTCAAAATTGCCTaGAACAATGCTAGTTACAGGAAACCGGTGTTTAGAAACAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALILRQSYFLSLKIA*NNASYRKPVFRNKQ Trigger: CTGCTTGTTTCTAAACACCGGTTTCCTGTAACTAGCATTGTTCCAGGCAATTTTGAGAGAGAGAAAATATGATTGCCTAAGTATTAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR TCA 90 bp | AGCGCTTTACATATATTACCATATTTAATCCTTTATGCTCCCCTTTaGGGGACAATTCCCATCCTCAAGATGTGGAAATTGTATTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SALHILPYLILYAPL*GTIPILKMWKLYSL Trigger: CAAAGAATACAATTTCCACATCTTGAGGATGGGAATTGTCCCTCAAAGGGGAGCATAAAGGATTAAATATGGTAATATATGTAAAGCGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGAGCCACACTCATCTCTGCTCAGGAAAAGAGGCCAAGGGGAGGGCACCTGCTGGTCGCATGCACTaGCATCCTGGGTGCGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LLSHTHLCSGKEAKGRAPAGRMH*HPGCEF Trigger: AAACTCGCACCCAGGATGTCAGTGCATGCGACCAGC...AGGTGCCCTCCCCTTGGCCTCTTTTCCTGAGCAGAGATGAGTGTGGCTCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTGGGGAGGGGGCGAGGTaGTGGCCGAGCGAGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFGEGAR*WPSELG Trigger: GCCAAGCTCGCTCGGCCACCACCTCGCCCCCTCCCC...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTGAGGGGGCGAGGTGGTaGCCGAGCGAGCTTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFEGARW*PSELGP Trigger: AGGGCCAAGCTCGCTCGGCCACCACCTCGCCCCCTC...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTGGGGGTGTTAAAGCCTTTCCCCATTaGCTAGCAAAATCCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: GQNSIRVTLSMAERGGGVKAFPH*LAKSKV Trigger: TACTTTGGATTTTGCTAGGCAATGGGGAAAGGCTTT...AACACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR-3UTR CCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACAGAGCATTTAACAAGGTaGCTAGCTGGGATCGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: PFITCFGGKQQYIRAPPTEHLTR*LAGIAC Trigger: ACACGCGATCCCAGCTAGCCACCTTGTTAAATGCTC...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGCGGAACGTGGTGGGGGTGTTTACCCAGTGCAGGTGTTTTACATATATCAGGACCGATTTCGCTaGCAACTTTTATTCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: SMAERGGGVYPVQVFYIYQDRFR*QLLFNR Trigger: CCTGTTGAATAAAAGTTGTCAGCGAAATCGGTCCTG...ATATATGTAAAACACCTGCACTGGGTAAACACCCCCACCACGTTCCGCCATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR-3UTR TCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACACCATTCTGCTATCTTTaGCAAGGAACGCCTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PFITCFGGKQQYIRAPPTPFCYL*QGTPSV Trigger: CACTGAAGGCGTTCCTTGTCAAAGATAGCAGAATGG...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTGGGGGTGGCAGAGGCTaGGAAACACAGCAAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFGGGRG*ETQQAP Trigger: TGGAGCTTGCTGTGTTTCCCAGCCTCTGCCACCCCC...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGCGGAACGTGGTGGGGGTGTTTACCCAGTGCAGGTGTTTTACATATATCAGCAATTTGCTGAGTaGCTCTTTACACATTATGGA | + |
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Preference number: 2 (lower is better) Translates to: SMAERGGGVYPVQVFYIYQQFAE*LFTHYG Trigger: TCCATAATGTGTAAAGAGTCACTCAGCAAATTGCTG...ATATATGTAAAACACCTGCACTGGGTAAACACCCCCACCACGTTCCGCCATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR-3UTR GCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACAGCCACACTCATCTCTaGTCAGGAAAAGAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYSHTHL*SGKEAK Trigger: CTTGGCCTCTTTTCCTGAGCAGAGATGAGTGTGGCT...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR CAA 90 bp | TTATATATAATTGCATCTCCCCCACCCCAACCCAGGTCTTACTCTTaGATAAACAACTGCGACCATCGTGTTACAAATGCCTCTTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LYIIASPPPQPRSYS*INNCDHRVTNASCA Trigger: GGCACAAGAGGCATTTGTAACACGATGGTCGCAGTTGTTTATCAAAGAGTAAGACCTGGGTTGGGGTGGGGGAGATGCAATTATATATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGTGCGGACAGACTGACTaGCAGGGAGGAAGTAGCATG | + |
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Preference number: 2 (lower is better) Translates to: LPSKIQSTESLFVRRLTRCGQTD*QGGSSM Trigger: CATGCTACTTCCTCCCTGTCAGTCAGTCTGTCCGCA...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR CAA 90 bp | ATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTaGATTGTGGCAGGTTCAGGAGTGGCTTTAGTTCATTCTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: IRPKLTSHTQKVDVG*IVAGSGVALVHSVL Trigger: TAAAACAGAATGAACTAAAGCCACTCCTGAACCTGCCACAATCAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTCAGGTTGGCAATCCATaGGCCAGACACCCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCQVGNP*ARHPFP Trigger: AGGGAAAGGGTGTCTGGCTCATGGATTGCCAACCTG...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | ATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGATTATATATACAGGCAATTaGTGGCCCGGTTCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: IIRPKLTSHTQKVDVGLIIYTGN*WPGSKV Trigger: CACCTTTGAACCGGGCCATCAATTGCCTGTATATAT...AATCAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTCGGGGGAATTCAGGTTaGCAATCCATGAGCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFRGNSG*QSMSQT Trigger: TGTCTGGCTCATGGATTGCCAACCTGAATTCCCCCG...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTGCTGCTCAGATCTTTaGCCCTTGTGCAAGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HNQTKVICVSLYFQNSVGCCSDL*PLCKSR Trigger: CCTGGACTTGCACAAGGGTCAAAGATCTGAGCAGCA...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTAAGGAACGCCTTCAGTaGATGTACAACGGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCKERLQ*MYNGRL Trigger: CAGCCTCCCGTTGTACATGCACTGAAGGCGTTCCTT...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTAGTCCAGGGTATGTGTaGGGCAGGCGGTGTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCSPGYV*GRRCKK Trigger: CTTTTTACACCGCCTGCCCCACACATACCCTGGACT...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTTCACACCCAGAAGGTTaGTGTAGGCTTGATTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCSHPEG*CRLDCG Trigger: GCCACAATCAAGCCTACATCAACCTTCTGGGTGTGA...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR GCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTCAGAAAGCTCCTATGTaGTCTCAGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFQKAPM*SQCVCV Trigger: CACACACACACACTGAGAGCACATAGGAGCTTTCTG...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTATGCATATGTTCCCATaGACCTCTGGTGAGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCMHMFP*TSGEPD Trigger: GTCTGGCTCACCAGAGGTGCATGGGAACATATGCAT...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACTCATTATCTTTTGAGTaGAAAGCCTTTCCCCATTGC | + |
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Preference number: 2 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYSLSFE*KAFPHC Trigger: GCAATGGGGAAAGGCTTTCCACTCAAAAGATAATGA...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR CAA 90 bp | GTCAATCTCCTGCCTCTCAGAATAGAATTCCTGCCTCCAACTCCCTaGTTCAGAAATCAAAGAGAATGCATTTTGTATTTCATATCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VNLLPLRIEFLPPTP*FRNQRECILYFISK Trigger: CTTGGATATGAAATACAAAATGCATTCTCTTTGATTTCTGAACAAGGGAGTTGGAGGCAGGAATTCTATTCTGAGAGGCAGGAGATTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CAA 90 bp | TCTCTAAAGCTGAGGACGGCTAACTTAGAGCATAGAAGAGAAGTTTaGCCATTAAGATTTCTCTGTCAAGCAGAACTAAGTGTTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLKLRTANLEHRREV*PLRFLCQAELSVLR Trigger: CCTCAAAACACTTAGTTCTGCTTGACAGAGAAATCTTAATGGCAAAACTTCTCTTCTATGCTCTAAGTTAGCCGTCCTCAGCTTTAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGATGTGTCTTTTCTTCTaGGCCACACTCATCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSKIQSTESLFVRRLTRMCLFF*ATLISA Trigger: AGCAGAGATGAGTGTGGCTCAGAAGAAAAGACACAT...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTGAGCTATGCCCTACATaGAGTATGCTGCTCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCELCPT*SMLLRS Trigger: AGATCTGAGCAGCATACTTCATGTAGGGCATAGCTC...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR-3UTR GCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCACCCCATTCATAACCTaGTTTGGGGGCAAACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: HNQTKVICVSLYFQNSVGTPFIT*FGGKQQ Trigger: TTGCTGTTTGCCCCCAAAGCAGGTTATGAATGGGGT...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| 3UTR CAA 90 bp | CAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTaGTCTACTATGGGATTAATTCTCAGGGAGTCCTACCGAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QKSFVFRYISKTVLA*STMGLILRESYRKR Trigger: TCTCTTTCGGTAGGACTCCCTGAGAATTAATCCCATAGTAGACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 90 bp | TTACTCTTTGATAAACAACTGCGACCATCGTGTTACAAATGCCTCTaGTGCCTAAGAATATATTTGCCTAAACTCTTTCTTCTGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLFDKQLRPSCYKCL*CLRIYLPKLFLLVL Trigger: CAGCACCAGAAGAAAGAGTTTAGGCAAATATATTCTTAGGCACAAGAGGCATTTGTAACACGATGGTCGCAGTTGTTTATCAAAGAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTGTAGAACGTCACGCGTaGTTAGTTAGTAACTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFVERHA*LVSNSS Trigger: ACTTGAGTTACTAACTAACCACGCGTGACGTTCTAC...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 90 bp | GTCCATGGTATAGCAAGAACTACACATACCCAACTTATATTTAAGTaGCAAGCACATGCTTCAGAAAGCTACTTTTTAAACAGTCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VHGIARTTHTQLIFK*QAHASESYFLNSPL Trigger: AAGGGGACTGTTTAAAAAGTAGCTTTCTGAAGCATGTGCTTGCAACTTAAATATAAGTTGGGTATGTGTAGTTCTTGCTATACCATGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTTTGTTACTGACTATATaGTGTCAATCTCCTGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DKTWCELETLCANDRLSFLLLTI*CQSPAS Trigger: AGAGGCAGGAGATTGACACCATATAGTCAGTAACAA...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTAAGCATCGTAATGCATaGGATGAGAGTAAGTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCKHRNA*DESKFV Trigger: AACAAACTTACTCTCATCTCATGCATTACGATGCTT...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCAAAGTATGGATGTCATaGGCTAAGTCTTCAAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: HNQTKVICVSLYFQNSVGKVWMS*AKSSKV Trigger: GACTTTTGAAGACTTAGCGCATGACATCCATACTTT...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCCATACATGTCCAGCATaGAGGCTTCTTTTATTAATA | + |
|
Preference number: 2 (lower is better) Translates to: HNQTKVICVSLYFQNSVGHTCPA*RLLLLI Trigger: TATTAATAAAAGAAGCCTGCATGCTGGACATGTATG...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR GCA 72 bp | AGACAAGCCCCTACTCAGGTGCTCCAGTATCCAAGATaGTGGTCGCATGCACTGACATCCTGGGTGCGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RQAPTQVLQYPR*WSHALTSWVRV Trigger: AACTCGCACCCAGGATGTCAGTGCATGCGACCAGCATCTTGGATACTGGAGCACCTGAGTAGGGGCTTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR GCA 72 bp | TGCATATGTTCCCATGCACCTCTGGTGAGCCAGACTTaGTGGTCCCAGTCCCTCTATCTGTGCTCCTTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: CICSHAPLVSQT*WSQSLYLCSFV Trigger: GACGAAGGAGCACAGATAGAGGGACTGGGACCAGCAAGTCTGGCTCACCAGAGGTGCATGGGAACATATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CCA 72 bp | CAAGCCCCTACTCAGGTGCTCCAGTATCCAAGATGCTaGTCGCATGCACTGACATCCTGGGTGCGAGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QAPTQVLQYPRC*SHALTSWVRVC Trigger: ACAAACTCGCACCCAGGATGTCAGTGCATGCGACCAGCATCTTGGATACTGGAGCACCTGAGTAGGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR TCA 72 bp | ACACAGTGTCTGCTGGAGAGCATGAGTCTTAAAGCATaGCGGTCCGTCTCCACGCATGCCAGGGTACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQCLLESMSLKA*RSVSTHARVLS Trigger: ACTGAGTACCCTGGCATGCGTGGAGACGGACCGTCATGCTTTAAGACTCATGCTCTCCAGCAGACACTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CCA 72 bp | ATATGTTCCCATGCACCTCTGGTGAGCCAGACTTGCTaGTCCCAGTCCCTCTATCTGTGCTCCTTCGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ICSHAPLVSQTC*SQSLYLCSFVR Trigger: TCTGACGAAGGAGCACAGATAGAGGGACTGGGACCAGCAAGTCTGGCTCACCAGAGGTGCATGGGAACATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACAACGGGGGAATTCAGGTaGGCAATCCATGAGCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PFITCFGGKQQYIRAPPTTGEFR*AIHEPD Trigger: GTCTGGCTCATGGATTGCCAACCTGAATTCCCCCGT...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR TCA 72 bp | AGCTATGCCCTACATGAAGTATGCTGCTCAGATCTTTaGCCCTTGTGCAAGTCCAGGGTATGTGTGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SYALHEVCCSDL*PLCKSRVCVGQ Trigger: CTGCCCCACACATACCCTGGACTTGCACAAGGGTCAAAGATCTGAGCAGCATACTTCATGTAGGGCATAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CCA 72 bp | GTTTCAAGGACTGAAGATGACATACGTTCTGGCTCCTaGGAGACTGGCTCCTCAGTAGCTTCTCACCATACC | + |
|
Preference number: 3 (lower is better) Translates to: VSRTEDDIRSGS*ETGSSVASHHT Trigger: GGTATGGTGAGAAGCTACTGAGGAGCCAGTCTCCCAGGAGCCAGAACGTATGTCATCTTCAGTCCTTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CCA 72 bp | CCCAATTCAAAAGAGCCATCACCACCACCACAAGCTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PNSKEPSPPPQA*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCAAGCTTGTGGTGGTGGTGATGGCTCTTTTGAATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGCGGAACGTGGTGGGGGTGTTTACCCAGTGCAGGTGTTTTACATATATGAAAGCCTTTCCCCATaGCCTAGCAAAATCCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SMAERGGGVYPVQVFYIYESLSP*PSKIQS Trigger: ACTTTGGATTTTGCTAGGCAATGGGGAAAGGCTTTC...ATATATGTAAAACACCTGCACTGGGTAAACACCCCCACCACGTTCCGCCATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACACTGCCTCCAACTCCCTaGTTCAGAAATCAAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PFITCFGGKQQYIRAPPTLPPTP*FRNQRE Trigger: TTCTCTTTGATTTCTGAACAAGGGAGTTGGAGGCAG...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR TCA 72 bp | AAACTCTTTCTTCTGGTGCTGAGCTTTGGGTCCAAGTaGTATACCCATTTCCTCCTCGCCAGACTGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: KLFLLVLSFGSK*YTHFLLARLVM Trigger: CATTACCAGTCTGGCGAGGAGGAAATGGGTATATCACTTGGACCCAAAGCTCAGCACCAGAAGAAAGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR TCA 72 bp | CTTCTGAAGTCTCTCGTGTCTGAAAGCGCTTTTCAGTaGAGGTTAACTTTTGCTTTGAGCCAGTCACTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LLKSLVSESAFQ*RLTFALSQSLR Trigger: GCGGAGTGACTGGCTCAAAGCAAAAGTTAACCTTCACTGAAAAGCGCTTTCAGACACGAGAGACTTCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR GCA 72 bp | GCCCATTCTGCTATCTTTGACAAGGAACGCCTTCAGTaGATGTACAACGGGAGGCTGAAGTTCATTGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: AHSAIFDKERLQ*MYNGRLKFIVT Trigger: AGTTACAATGAACTTCAGCCTCCCGTTGTACATGCACTGAAGGCGTTCCTTGTCAAAGATAGCAGAATGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CAA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTTCTGGTGAGCCAGACTaGCTGGTCCCAGTCCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DKTWCELETLCANDRLSFSGEPD*LVPVPL Trigger: TAGAGGGACTGGGACCAGCAAGTCTGGCTCACCAGA...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR TCA 72 bp | CCTCCAGATACCAATCACATTATGTGTCTTTTCTTCTaGGCCACACTCATCTCTGCTCAGGAAAAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PPDTNHIMCLFF*ATLISAQEKRP Trigger: TGGCCTCTTTTCCTGAGCAGAGATGAGTGTGGCTCAGAAGAAAAGACACATAATGTGATTGGTATCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CCA 72 bp | GTGATCATTCAATTAGACCCCATTCATAACCTGCTTTaGGGGCAAACAGCAATATATCAGAGCACCGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: VIIQLDPIHNLL*GQTAIYQSTAY Trigger: GTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGGGGTCTAATTGAATGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR GCA 72 bp | ATATACCCATTTCCTCCTCGCCAGACTGGTAATGTGTaGCTATTTTCTGGCTGTAGTCAGATGATGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: IYPFPPRQTGNV*LFSGCSQMMKI Trigger: GATTTTCATCATCTGACTACAGCCAGAAAATAGGCACACATTACCAGTCTGGCGAGGAGGAAATGGGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR TCA 72 bp | CCAACAGTGATTTATCTTCACTGCCCAGCAATTTGCTaGGTGACTCTTTACACATTATGGAGTTTTAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTVIYLHCPAIC*VTLYTLWSFKE Trigger: CTCCTTAAAACTCCATAATGTGTAAAGAGTCACTCAGCAAATTGCTGGGCAGTGAAGATAAATCACTGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR-3UTR CAA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTAAGAAGGCTCTGGGGTaGTACTTTTTCTGTTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DKTWCELETLCANDRLSFKKALG*YFFCCC Trigger: ACAACAACAGAAAAAGTACAACCCCAGAGCCTTCTT...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR GCA 72 bp | AAACAACTGCGACCATCGTGTTACAAATGCCTCTTGTaGCTAAGAATATATTTGCCTAAACTCTTTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KQLRPSCYKCLL*LRIYLPKLFLL Trigger: CAGAAGAAAGAGTTTAGGCAAATATATTCTTAGGCACAAGAGGCATTTGTAACACGATGGTCGCAGTTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGACATTTTCTTCTTCTTaGAAAAGGGCGTGCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPSKIQSTESLFVRRLTRTFSSS*KRACFR Trigger: TCTGAAGCACGCCCTTTTCAAAGAAGAAGAAAATGT...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR TCA 72 bp | CATATATTACCATATTTAATCCTTTATGCTCCCCTTTaGGGGACAATTCCCATCCTCAAGATGTGGAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: HILPYLILYAPL*GTIPILKMWKL Trigger: CAATTTCCACATCTTGAGGATGGGAATTGTCCCTCAAAGGGGAGCATAAAGGATTAAATATGGTAATATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR-3UTR CAA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTGTTTATGTTTAGTCTaGTCAGGACTGTGCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: HNQTKVICVSLYFQNSVGCLCLV*SGLCQQ Trigger: TTGTTGGCACAGTCCTGACAAGACTAAACATAAACA...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCGTATTTGTAACATGGTaGCAGGAATTTGTGTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HNQTKVICVSLYFQNSVGVFVTW*QEFVSV Trigger: AACTGACACAAATTCCTGCAACCATGTTACAAATAC...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR TCA 72 bp | AATGGGTCAGGGTTTAGGAATTCAACTGAAGGTAATTaGGATATTTTTCCAAGTGATCATTCAATTAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: NGSGFRNSTEGN*DIFPSDHSIRP Trigger: GGGTCTAATTGAATGATCACTTGGAAAAATATCTCAATTACCTTCAGTTGAATTCCTAAACCCTGACCCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 72 bp | CGCCAGGGGAGGGGGCGAGGTGGTGGCCGAGCGAGCTaGGCCCTGCAACTAGCAAGCCCACTCAGGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRGRGGGRAS*ALQLASPLRSG Trigger: CCCGCTCCTGAGTGGGCTTGCTAGTTGCAGGGCCAAGCTCGCTCGGCCACCACCTCGCCCCCTCCCCTGGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTGGGGGTGCGCCTTCTGTTCGCTaGCCGAGCCCGGGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QGQNSIRVTLSMAERGGGAPSVR*PSPGWA Trigger: CGCCCAGCCCGGGCTCGGGCAGCGAACAGAAGGCGC...ACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | CTTCTGAGCCACACTCATCTCTGCTCAGGAAAAGAGGCCAAGGGGAGGGCACCTGCGTGCTCATGGGGGTaGAGGACAGCGAGCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSHTHLCSGKEAKGRAPACSWG*RTASPR Trigger: CCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGC...AGGTGCCCTCCCCTTGGCCTCTTTTCCTGAGCAGAGATGAGTGTGGCTCAGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR TCA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGCCGCGTCCTCCGGGCTaGAGCCCAGCGCCTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLPRPPG*SPAPPG Trigger: ACCCGGAGGCGCTGGGCTTCAGCCCGGAGGACGCGG...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACACCAGCGCCTCCGGGTTaGGCTGCTGCGGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFITCFGGKQQYIRAPPTPAPPG*AAAGSR Trigger: CCGGCTACCCGCAGCAGCTCAACCCGGAGGCGCTGG...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGAGCCACACTCATCTCTGCTCAGGAAAAGAGGCCAAGGGGAGGGCACCCCATCGAAGCCACCCTaGAGCTGGTGGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEPHSSLLRKRGQGEGTPSKPP*SWWLLL Trigger: CAGCAACAGCCACCAGCTCCAGGGTGGCTTCGATGG...GGTGCCCTCCCCTTGGCCTCTTTTCCTGAGCAGAGATGAGTGTGGCTCAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACAGCCGTCGGATGGTGGTaGTGCCCCGCGGCGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFITCFGGKQQYIRAPPTAVGWW*CPAAWW Trigger: CCACCACGCCGCGGGGCACCACCACCATCCGACGGC...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACAGTGATGGTAGTGGGGTaGCGCGCCGCTCTGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFITCFGGKQQYIRAPPTVMVVG*RAALRG Trigger: GCCGCGCAGAGCGGCGCGGCACCCCACTACCATCAC...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTGGGGGTCCATGGCCAGGGGACTaGTGGGCAGGTCGGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGQNSIRVTLSMAERGGGPWPGD*WAGRNC Trigger: ACAATTCCGACCTGCCCACCAGTCCCCTGGCCATGG...ACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACAAAGCGGTCGTCGAAGTaGAGGCCGCCCGCGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PFITCFGGKQQYIRAPPTKRSSK*RPPAAW Trigger: CCATGCCGCGGGCGGCCTGCACTTCGACGACCGCTT...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAATAAAACCTTGCTTGGGTGCACGCAACAAGGAGCGAATAAGCAGAGTTGGGCGCCGAGAAGCTaGGGGACGGGGGCACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SENKTLLGCTQQGANKQSWAPRS*GTGAPS Trigger: GCTCGGTGCCCCCGTCCCCCAGCTTCTCGGCGCCCA...ACTCTGCTTATTCGCTCCTTGTTGCGTGCACCCAAGCAAGGTTTTATTTTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGCCGAGCTGCAGGGCGTaGTCATGGGGGTGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLPSCRA*SWGWRT Trigger: TGTCCTCCACCCCCATGAGCACGCCCTGCAGCTCGG...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTGGGGGTAGCCTGGAGATCTCCTaGTTGAGGTGGTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGQNSIRVTLSMAERGGGSLEIS*LRWSTC Trigger: GCAGGTAGACCACCTCAAGCAGGAGATCTCCAGGCT...ACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGTGCTCCAGTATCCAAGATGCTGGTCGCATGCACTGACATCCTGGGTGAGGAAGGGTTGTCGCTaGTCGAGCCGTTTTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQYPRCWSHALTSWVRKGCR*SSRFLG Trigger: TCCGAGAAAACGGCTCGAGCAGCGACAACCCTTCCT...CACCCAGGATGTCAGTGCATGCGACCAGCATCTTGGATACTGGAGCACCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | ATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGATTACGGGGGCACCGAGCTaGAGGGCGTGCTCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IIRPKLTSHTQKVDVGLITGAPS*RACSWG Trigger: CCCCCATGAGCACGCCCTGCAGCTCGGTGCCCCCGT...AATCAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACGTGATGGTAGTGGGGTaGCGCGCCGCTCTGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYVMVVG*RAALRG Trigger: GCCGCGCAGAGCGGCGCGGCACCCCACTACCATCAC...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | CCATTCATAACCTGCTTTGGGGGCAAACAGCAATATATCAGAGCACCGCCTACACCACCCTGGAGCTGGTaGCTGTTGCTGATGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFITCFGGKQQYIRAPPTPPWSW*LLLMSA Trigger: GGCGCTCATCAGCAACAGCCACCAGCTCCAGGGTGG...TGTAGGCGGTGCTCTGATATATTGCTGTTTGCCCCCAAAGCAGGTTATGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 72 bp | GCCAAGGGGAGGGCACCTGGGCACTTACAGTACAAATaGAGGCTAAAAGCTAGAGTGTGTGACCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKGRAPGHLQYK*RLKARVCDPGR Trigger: CCTTCCTGGGTCACACACTCTAGCTTTTAGCCTCAATTTGTACTGTAAGTGCCCAGGTGCCCTCCCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CAA 72 bp | ATGCATATGTTCCCATGCACCTCTGGTGAGCCAGACTaGCTGGTCCCAGTCCCTCTATCTGTGCTCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MHMFPCTSGEPD*LVPVPLSVLLR Trigger: ACGAAGGAGCACAGATAGAGGGACTGGGACCAGCAAGTCTGGCTCACCAGAGGTGCATGGGAACATATGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR TCA 90 bp | GAGATGTGTCATCAATTACTTTTTAAAACTGCGGCTGGGATGACAATCATTATCCCGCGTCCTCCGGGCTaGAGCCCAGCGCCTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EMCHQLLFKTAAGMTIIIPRPPG*SPAPPG Trigger: ACCCGGAGGCGCTGGGCTTCAGCCCGGAGGACGCGG...GATAATGATTGTCATCCCAGCCGCAGTTTTAAAAAGTAATTGATGACACATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACAAGCGGTCGTCGAAGTaGAGGCCGCCCGCGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYKRSSK*RPPAAW Trigger: CCATGCCGCGGGCGGCCTGCACTTCGACGACCGCTT...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGCCATGGCCAGGGGACTaGTGGGCAGGTCGGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLPWPGD*WAGRNC Trigger: ACAATTCCGACCTGCCCACCAGTCCCCTGGCCATGG...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGCCAGCGCCTCCGGGTTaGGCTGCTGCGGGTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSKIQSTESLFVRRLTRPAPPG*AAAGSR Trigger: CCGGCTACCCGCAGCAGCTCAACCCGGAGGCGCTGG...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACCCGAGCTGCAGGGCGTaGTCATGGGGGTGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYPSCRA*SWGWRT Trigger: TGTCCTCCACCCCCATGAGCACGCCCTGCAGCTCGG...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGGACAATTCCCATCCTCAAGATGTGGAAATTGTATTCTTTGTAGTACCACGGGGGCACCGAGCTaGAGGGCGTGCTCATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FEGQFPSSRCGNCILCSTTGAPS*RACSWG Trigger: CCCCCATGAGCACGCCCTGCAGCTCGGTGCCCCCGT...GGTACTACAAAGAATACAATTTCCACATCTTGAGGATGGGAATTGTCCCTCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | CAAGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTGGGGGTTTTCTCGGAAGCCGTTaGTCACCAGCTTCTCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: QGQNSIRVTLSMAERGGGFLGSR*SPASRI Trigger: AATACGAGAAGCTGGTGAGCAACGGCTTCCGAGAAA...ACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGGCCGTCGGATGGTGGTaGTGCCCCGCGGCGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSKIQSTESLFVRRLTRAVGWW*CPAAWW Trigger: CCACCACGCCGCGGGGCACCACCACCATCCGACGGC...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGAGCCTGGAGATCTCCTaGTTGAGGTGGTCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLSLEIS*LRWSTC Trigger: GCAGGTAGACCACCTCAAGCAGGAGATCTCCAGGCT...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTGCGTGCTCATGGGGGTaGAGGACAGCGAGCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DKTWCELETLCANDRLSFACSWG*RTASPR Trigger: CCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGC...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTGGGCGCCGAGAAGCTaGGGGACGGGGGCACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HNQTKVICVSLYFQNSVGWAPRS*GTGAPS Trigger: GCTCGGTGCCCCCGTCCCCCAGCTTCTCGGCGCCCA...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACCCACCCTGGAGCTGGTaGCTGTTGCTGATGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYPPWSW*LLLMSA Trigger: GGCGCTCATCAGCAACAGCCACCAGCTCCAGGGTGG...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGATCTCCTGCTTGAGGTaGTCTACCTGCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLISCLR*STCCSS Trigger: GCTGCTGCAGCAGGTAGACCACCTCAAGCAGGAGAT...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCTCACCATACCCATCGACTCTGTGAGATGTTCGAGTGCATGGATGTTAATAGGTGGTCTACCTGCTaGAGCAGCTGGTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASHHTHRLCEMFECMDVNRWSTC*SSWFFS Trigger: GGAGAAGAACCAGCTGCTGCAGCAGGTAGACCACCT...ATTAACATCCATGCACTCGAACATCTCACAGAGTCGATGGGTATGGTGAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAATAAAACCTTGCTTGGGTGCACGCAACAAGGAGCGAATAAGCAGAGTTGGCCAGGGGACTGGTaGGCAGGTCGGAATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SENKTLLGCTQQGANKQSWPGDW*AGRNCS Trigger: TGAACAATTCCGACCTGCCCACCAGTCCCCTGGCCA...ACTCTGCTTATTCGCTCCTTGTTGCGTGCACCCAAGCAAGGTTTTATTTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | GCTTCTCACCATACCCATCGACTCTGTGAGATGTTCGAGTGCATGGATGTTAATTTGAGGTGGTCTACCTaGTGCAGCAGCTGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASHHTHRLCEMFECMDVNLRWST*CSSWFF Trigger: GAAGAACCAGCTGCTGCAGCAGGTAGACCACCTCAA...ATTAACATCCATGCACTCGAACATCTCACAGAGTCGATGGGTATGGTGAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAATAAAACCTTGCTTGGGTGCACGCAACAAGGAGCGAATAAGCAGAGTATCTCCTGCTTGAGGTaGTCTACCTGCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SENKTLLGCTQQGANKQSISCLR*STCCSS Trigger: GCTGCTGCAGCAGGTAGACCACCTCAAGCAGGAGAT...ACTCTGCTTATTCGCTCCTTGTTGCGTGCACCCAAGCAAGGTTTTATTTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CAA 72 bp | ATTGCATCTCCCCCACCCCAACCCAGGTCTTACTCTTaGATAAACAACTGCGACCATCGTGTTACAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IASPPPQPRSYS*INNCDHRVTNA Trigger: GGCATTTGTAACACGATGGTCGCAGTTGTTTATCAAAGAGTAAGACCTGGGTTGGGGTGGGGGAGATGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR TCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACTGGAGATCTCCTGCTTaGGGTGGTCTACCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYWRSPA*GGLPAA Trigger: TGCAGCAGGTAGACCACCTCAAGCAGGAGATCTCCA...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGGACAATTCCCATCCTCAAGATGTGGAAATTGTATTCTTTGTAGTACCTCCAGGACGTGTCTCTaGTGCACCCTCTTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FEGQFPSSRCGNCILCSTSRTCL*CTLLKR Trigger: CCGCTTCAAGAGGGTGCAGCAGAGACACGTCCTGGA...GGTACTACAAAGAATACAATTTCCACATCTTGAGGATGGGAATTGTCCCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR CCA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGATGAGACGGCCGCACTaGCTGATGATGCGGTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSKIQSTESLFVRRLTRMRRPH*LMMRSV Trigger: GACCGACCGCATCATCAGCCAGTGCGGCCGTCTCAT...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGAGGACGTGTCTCTGCTaGACCCTCTTGAAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSKIQSTESLFVRRLTRRTCLC*TLLKRQ Trigger: CTGCCGCTTCAAGAGGGTGCAGCAGAGACACGTCCT...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTAGGACGTGTCTCTGCTaGACCCTCTTGAAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKTWCELETLCANDRLSFRTCLC*TLLKRQ Trigger: CTGCCGCTTCAAGAGGGTGCAGCAGAGACACGTCCT...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTTGGCCAGGGGACTGGTaGGCAGGTCGGAATTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DKTWCELETLCANDRLSFWPGDW*AGRNCS Trigger: TGAACAATTCCGACCTGCCCACCAGTCCCCTGGCCA...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCCCATCGAAGCCACCCTaGAGCTGGTGGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNQTKVICVSLYFQNSVGPSKPP*SWWLLL Trigger: CAGCAACAGCCACCAGCTCCAGGGTGGCTTCGATGG...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 72 bp | AAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTaGATTGTGGCAGGTTCAGGAGTGGCTTTAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLTSHTQKVDVG*IVAGSGVALVH Trigger: ATGAACTAAAGCCACTCCTGAACCTGCCACAATCAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTTCCAGGACGTGTCTCTaGTGCACCCTCTTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCSRTCL*CTLLKR Trigger: CCGCTTCAAGAGGGTGCAGCAGAGACACGTCCTGGA...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTAGGTGGTCTACCTGCTaGAGCAGCTGGTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCRWSTC*SSWFFS Trigger: GGAGAAGAACCAGCTGCTGCAGCAGGTAGACCACCT...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | GATAAAACCTGGTGTGAACTGGAAACTCTGTGTGCAAATGATAGACTTTCTTTTTTGAGGTGGTCTACCTaGTGCAGCAGCTGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DKTWCELETLCANDRLSFLRWST*CSSWFF Trigger: GAAGAACCAGCTGCTGCAGCAGGTAGACCACCTCAA...AAAAGAAAGTCTATCATTTGCACACAGAGTTTCCAGTTCACACCAGGTTTTATC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTGTAGGAAGGGTTGTCGCTaGTCGAGCCGTTTTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDKSHLCFAIFPKQCWLCRKGCR*SSRFLG Trigger: TCCGAGAAAACGGCTCGAGCAGCGACAACCCTTCCT...ACAAAGCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS-3UTR CCA 90 bp | AAACCGGTGTTTAGAAACAAGCAGGGTCCATGTTCACACAAGTTCGGAAAATACTGTAGAGGAGTCCCTTaGGTACATGAAAAATTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVFRNKQGPCSHKFGKYCRGVP*VHEKFG Trigger: CCCGAATTTTTCATGTACCCAAGGGACTCCTCTACA...GTATTTTCCGAACTTGTGTGAACATGGACCCTGCTTGTTTCTAAACACCGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CAA 72 bp | CATTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTaGTTCGGAGACTTACAAGGGTCCTTGGGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLAKSKVQNLY*FGDLQGSLGVK Trigger: CTTGACCCCCAAGGACCCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| CDS-3UTR GCA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTTTCTCGGAAGCCGTTaGTCACCAGCTTCTCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HNQTKVICVSLYFQNSVGFLGSR*SPASRI Trigger: AATACGAGAAGCTGGTGAGCAACGGCTTCCGAGAAA...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 72 bp | CTGCCTCTCAGAATAGAATTCCTGCCTCCAACTCCCTaGTTCAGAAATCAAAGAGAATGCATTTTGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRIEFLPPTP*FRNQRECILYF Trigger: GAAATACAAAATGCATTCTCTTTGATTTCTGAACAAGGGAGTTGGAGGCAGGAATTCTATTCTGAGAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 72 bp | GATAAACAACTGCGACCATCGTGTTACAAATGCCTCTaGTGCCTAAGAATATATTTGCCTAAACTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKQLRPSCYKCL*CLRIYLPKLFL Trigger: AAGAAAGAGTTTAGGCAAATATATTCTTAGGCACAAGAGGCATTTGTAACACGATGGTCGCAGTTGTTTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| 3UTR CAA 72 bp | CATCATTATAGTGGATTAAAGTGTCTATTCCTATACTaGTTTCAAGGACTGAAGATGACATACGTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HHYSGLKCLFLY*FQGLKMTYVLA Trigger: AGCCAGAACGTATGTCATCTTCAGTCCTTGAAACAAGTATAGGAATAGACACTTTAATCCACTATAATGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CAA 72 bp | ACATATATTACCATATTTAATCCTTTATGCTCCCCTTaGAGGGACAATTCCCATCCTCAAGATGTGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TYITIFNPLCSP*RDNSHPQDVEI Trigger: AATTTCCACATCTTGAGGATGGGAATTGTCCCTCAAAGGGGAGCATAAAGGATTAAATATGGTAATATATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
||
| 3UTR CAA 72 bp | ACAACTTTGATTTGTGCAAAGTGTTTATGTTTAGTCTaGTCAGGACTGTGCCAACAAGAAAATCACAACATG | + |
|
Preference number: 4 (lower is better) Translates to: TTLICAKCLCLV*SGLCQQENHNM Trigger: CATGTTGTGATTTTCTTGTTGGCACAGTCCTGACAAGACTAAACATAAACACTTTGCACAAATCAAAGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
||
| CDS GCA 90 bp | GTGGTGGTGCCCCGCGGCGTGGTGGTGGTGGTGATGGTAGTGGGGTaGCGCGCCGCTCTGCGCGGCGGCCGCGGCGATCACGGCGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VVVPRGVVVVVMVVG*RAALRGGRGDHGGH Trigger: GTGTCCGCCGTGATCGCCGCGGCCGCCGCGCAGAGCGGCGCGGCACCCCACTACCATCACCACCACCACCACGCCGCGGGGCACCACCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069009.7 ENSMUST00000109104.2 |
||
| CDS CCA 90 bp | AGTAGTCTTCCAGGTGCGCCTTCTGTTCGCTGCCCGAGCCCGGGCTaGGCGCCGAGAAGCTGGGGGACGGGGGCACCGAGCTGCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSLPGAPSVRCPSPG*APRSWGTGAPSCRA Trigger: CGCCCTGCAGCTCGGTGCCCCCGTCCCCCAGCTTCTCGGCGCCCAGCCCGGGCTCGGGCAGCGAACAGAAGGCGCACCTGGAAGACTACT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069009.7 ENSMUST00000109104.2 |
||
| CDS GCA 90 bp | CTTTCGCGCACCAGCCTGGAGATCTCCTGCTTGAGGTGGTCTACCTaGTGCAGCAGCTGGTTCTTCTCCGACTCCAGGACGTGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRTSLEISCLRWST*CSSWFFSDSRTCLC Trigger: GCAGAGACACGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAGGTAGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069009.7 ENSMUST00000109104.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCAGAATTCCATCCGTGTAACACTGTCCATGGCGGAACGTGGTGGGGGTTGGAGCTGGTGGCTGTaGCTGATGAGCGCCTCGACC | + |
|
Preference number: 5 (lower is better) Translates to: QGQNSIRVTLSMAERGGGWSWWL*LMSAST Trigger: GGTCGAGGCGCTCATCAGCAACAGCCACCAGCTCCA...ACCCCCACCACGTTCCGCCATGGACAGTGTTACACGGATGGAATTCTGACCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| CDS-3UTR CAA 90 bp | GCTTCTCACCATACCCATCGACTCTGTGAGATGTTCGAGTGCATGGATGTTAATCGGATCACCTCCTCCTaGCTGACCCCGCGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ASHHTHRLCEMFECMDVNRITSS*LTPRSC Trigger: GCAGCTGCGCGGGGTCAGCAAGGAGGAGGTGATCCG...ATTAACATCCATGCACTCGAACATCTCACAGAGTCGATGGGTATGGTGAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| CDS-3UTR CAA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGCTGGAGATCTCCTGCTaGAGGTGGTCTACCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLLEISC*RWSTCC Trigger: GCAGCAGGTAGACCACCTCAAGCAGGAGATCTCCAG...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| CDS-3UTR CAA 90 bp | GCTTCTCACCATACCCATCGACTCTGTGAGATGTTCGAGTGCATGGATGTTAATCTGGAGATCTCCTGCTaGAGGTGGTCTACCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ASHHTHRLCEMFECMDVNLEISC*RWSTCC Trigger: GCAGCAGGTAGACCACCTCAAGCAGGAGATCTCCAG...ATTAACATCCATGCACTCGAACATCTCACAGAGTCGATGGGTATGGTGAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| CDS-3UTR CAA 90 bp | GGCATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGGTGGGCAGGTCGGAATaGTTCATTGCCAGTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GIIRPKLTSHTQKVDVGLVGRSE*FIASSE Trigger: TTCAGAACTGGCAATGAACAATTCCGACCTGCCCAC...CAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| CDS-3UTR CAA 90 bp | CATAATCAGACAAAAGTCATTTGTGTTTCGCTATATTTCCAAAACAGTGTTGGCTGGAGCTGGTGGCTGTaGCTGATGAGCGCCTCGACC | + |
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Preference number: 5 (lower is better) Translates to: HNQTKVICVSLYFQNSVGWSWWL*LMSAST Trigger: GGTCGAGGCGCTCATCAGCAACAGCCACCAGCTCCA...GCCAACACTGTTTTGGAAATATAGCGAAACACAAATGACTTTTGTCTGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| CDS-3UTR CAA 90 bp | ATCATAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTGATGTAGGCTTGATTTTTTCTCGGAAGCCGTaGCTCACCAGCTTCTCGTAT | + |
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Preference number: 5 (lower is better) Translates to: IIRPKLTSHTQKVDVGLIFSRKP*LTSFSY Trigger: ATACGAGAAGCTGGTGAGCAACGGCTTCCGAGAAAA...AATCAAGCCTACATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTATGAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109104.2 |
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| CDS-3UTR CAA 90 bp | TTTGAGGGACAATTCCCATCCTCAAGATGTGGAAATTGTATTCTTTGTAGTACCGTGGGCAGGTCGGAATaGTTCATTGCCAGTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FEGQFPSSRCGNCILCSTVGRSE*FIASSE Trigger: TTCAGAACTGGCAATGAACAATTCCGACCTGCCCAC...GGTACTACAAAGAATACAATTTCCACATCTTGAGGATGGGAATTGTCCCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| CDS-3UTR CAA 90 bp | TTGCCTAGCAAAATCCAAAGTACAGAATCTTTATTTGTTCGGAGACTTACAAGGTTTTCTCGGAAGCCGTaGCTCACCAGCTTCTCGTAT | + |
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Preference number: 5 (lower is better) Translates to: LPSKIQSTESLFVRRLTRFSRKP*LTSFSY Trigger: ATACGAGAAGCTGGTGAGCAACGGCTTCCGAGAAAA...CCTTGTAAGTCTCCGAACAAATAAAGATTCTGTACTTTGGATTTTGCTAGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069009.7 |
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| CDS GCA 72 bp | GTCACCAACTGCTCGTCCGAGAAGCGGTCGTCGAAGTaGAGGCCGCCCGCGGCATGGTGCGGGTGCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VTNCSSEKRSSK*RPPAAWCGCRA Trigger: CGCCCTGCACCCGCACCATGCCGCGGGCGGCCTGCACTTCGACGACCGCTTCTCGGACGAGCAGTTGGTGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069009.7 ENSMUST00000109104.2 |
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| CDS CCA 72 bp | GAGGACAGCGAGCCCCCGGCGATGAGACGGCCGCACTaGCTGATGATGCGGTCGGTCTCCACCGGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: EDSEPPAMRRPH*LMMRSVSTGSF Trigger: AAAGGAACCGGTGGAGACCGACCGCATCATCAGCCAGTGCGGCCGTCTCATCGCCGGGGGCTCGCTGTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069009.7 ENSMUST00000109104.2 |
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| CDS GCA 72 bp | ACCAGCCTGGAGATCTCCTGCTTGAGGTGGTCTACCTaGTGCAGCAGCTGGTTCTTCTCCGACTCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: TSLEISCLRWST*CSSWFFSDSRT Trigger: CGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAGGTAGACCACCTCAAGCAGGAGATCTCCAGGCTGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069009.7 ENSMUST00000109104.2 |
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