Pregenerated sensors for MAEL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040629Ensembl transcript IDs: ENSMUST00000038782.4, ENSMUST00000194057.6
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCAAGTCAGAAAGGAAGTTaGCTTGTTATTTTTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LKSSQFCLSTQTVRTYPSSQKGS*LVIFPE Trigger: TTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT...TGATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCAGAAAGGAAGTTGGCTaGTTATTTTTCCAGAAATCG | + |
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Preference number: 3 (lower is better) Translates to: FEIISVLFEYSDSKDIPIRKEVG*LFFQKS Trigger: CGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCT...GATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAAGAAATAGTAGGCATTaGGGCTGGCCCTGCGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPRNSRH*GWPCGW Trigger: CCAACCGCAGGGCCAGCCGCAATGCCTACTATTTCT...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCATCCTTTCCCTGGGCTaGTCTCCACTCTCGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIILSLG*SPLSSH Trigger: ATGGCTCGAGAGTGGAGAGCAGCCCAGGGAAAGGAT...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTCCAGAATCCTTTCCCTaGGCTGCTCTCCACTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSPESFP*AALHSR Trigger: TCGAGAGTGGAGAGCAGCCCAGGGAAAGGATTCTGG...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCCCAGAATCCTTTCCCTaGGCTGCTCTCCACTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIPESFP*AALHSR Trigger: TCGAGAGTGGAGAGCAGCCCAGGGAAAGGATTCTGG...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAAAGCGCTGTTCACAATaGGGAGGTAGCTCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPKRCSQ*GGSSPW Trigger: CCATGGTGAGCTACCTCCTCATTGTGAACAGCGCTT...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | TTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCAATCCTTTCCCTGGGCTaGTCTCCACTCTCGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKSSQFCLSTQTVRTYPSILSLG*SPLSSH Trigger: ATGGCTCGAGAGTGGAGAGCAGCCCAGGGAAAGGAT...TGATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTGTTTTGGTACAAGCATaGCTGGCCTCCTCAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSVLVQA*LASSVV Trigger: CACCACTGAGGAGGCCAGGCATGCTTGTACCAAAAC...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATGGTACAAGCATGCCTaGCCTCCTCAGTGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPWYKHA*PPQWCR Trigger: TCTACACCACTGAGGAGGCCAGGCATGCTTGTACCA...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCGTACATGAGCTCCAGTaGGCTGGATTCCAAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTVHELQ*AGFQTE Trigger: CTCTGTTTGGAATCCAGCTCACTGGAGCTCATGTAC...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTGTACATGAGCTCCAGTaGGCTGGATTCCAAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSVHELQ*AGFQTE Trigger: CTCTGTTTGGAATCCAGCTCACTGGAGCTCATGTAC...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAGCCTGGCCTCCTCAGTaGTGTAGATACAAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPAWPPQ*CRYKFL Trigger: CAGAAACTTGTATCTACACCACTGAGGAGGCCAGGC...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCGCCTGGCCTCCTCAGTaGTGTAGATACAAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTAWPPQ*CRYKFL Trigger: CAGAAACTTGTATCTACACCACTGAGGAGGCCAGGC...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCCTTGCAGCCTGGCAATaGAATCGAAATCCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTILAAWQ*NRNPRG Trigger: TCCACGAGGATTTCGATTCCATTGCCAGGCTGCAAG...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038782.4 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCACTTGCAGTAAATAGGTaGCCAGTTCCCTGGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPLAVNR*PVPWVW Trigger: CCAAACCCAGGGAACTGGCCACCTATTTACTGCAAG...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCTTGCAGTAAATAGGTaGCCAGTTCCCTGGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTLAVNR*PVPWVW Trigger: CCAAACCCAGGGAACTGGCCACCTATTTACTGCAAG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAAGTTTCTGCTTCTCTaGAGGCCCAGAATCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTKFLLL*RPRILS Trigger: GGAAAGGATTCTGGGCCTTCAGAGAAGCAGAAACTT...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAGCTTCAAACACCAGTTaGCTCTGGCTCTATCATCAG | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPASNTS*LWLYHQ Trigger: CTGATGATAGAGCCAGAGTCAACTGGTGTTTGAAGC...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTGCTTCAAACACCAGTTaGCTCTGGCTCTATCATCAG | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSASNTS*LWLYHQ Trigger: CTGATGATAGAGCCAGAGTCAACTGGTGTTTGAAGC...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCAAGGTCCTCTACAGTaGGAAGTTCTAGATCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTQGPLQ*EVLDLA Trigger: GGCAAGATCTAGAACTTCTCACTGTAGAGGACCTTG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCTCTTGTAGTGGTACATaGGCTCCAGTGAGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTISCSGT*APVSWI Trigger: AATCCAGCTCACTGGAGCTCATGTACCACTACAAGA...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCTCTTGTAGTGGTACATaGGCTCCAGTGAGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTSCSGT*APVSWI Trigger: AATCCAGCTCACTGGAGCTCATGTACCACTACAAGA...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCTGGGTGTCACACTGTTaGTGGCCTCATAGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIWVSHC*WPHSLV Trigger: TACAAGACTATGAGGCCAGCAACAGTGTGACACCCA...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATGGGTGTCACACTGTTaGTGGCCTCATAGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPWVSHC*WPHSLV Trigger: TACAAGACTATGAGGCCAGCAACAGTGTGACACCCA...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | TTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCAAAGTTTCTGCTTCTCTaGAGGCCCAGAATCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKSSQFCLSTQTVRTYPSKFLLL*RPRILS Trigger: GGAAAGGATTCTGGGCCTTCAGAGAAGCAGAAACTT...TGATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCTTCTGGTACCGCCCTaGATCCAATACAACCATTTT | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTLLVPP*IQYNHF Trigger: AAAATGGTTGTATTGGATGCAGGGCGGTACCAGAAG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCAGGGGGAGAAATACTTaGTTTTGGTACAAGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIRGRNT*FWYKHA Trigger: GGCATGCTTGTACCAAAACCAAGTATTTCTCCCCCT...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCGAATCACTTGCAGCCTaGCAATGGAATCGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIESLAA*QWNRNP Trigger: AGGATTTCGATTCCATTGCCAGGCTGCAAGTGATTC...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038782.4 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCACCAATACAACCATTTTaGGTGTCACACTGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPPIQPF*VSHCCW Trigger: CCAGCAACAGTGTGACACCCAAAATGGTTGTATTGG...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCCCAATACAACCATTTTaGGTGTCACACTGTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIPIQPF*VSHCCW Trigger: CCAGCAACAGTGTGACACCCAAAATGGTTGTATTGG...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR TCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCACCTGATTGTAAGAGTTaGAATGACAGAATCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPPDCKS*NDRILD Trigger: GTCCAGGATTCTGTCATTTCAACTCTTACAATCAGG...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCGTAGATACAAGTTTCTaGTTCTCTGAAGGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTVDTSF*FSEGPE Trigger: TTCTGGGCCTTCAGAGAAGCAGAAACTTGTATCTAC...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAGAAGTTCTAGATCTTaGCTTATTTCTGATGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTRSSRS*LISDAR Trigger: GCGGGCATCAGAAATAAGGCAAGATCTAGAACTTCT...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | ATACACAACAAGCAAGAGTGCCAAGATCTTCTCCAACCACAATTACTTTTAATCCTTCTGGTACCGCCCTaGATCCAATACAACCATTTT | + |
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Preference number: 4 (lower is better) Translates to: IHNKQECQDLLQPQLLLILLVPP*IQYNHF Trigger: AAAATGGTTGTATTGGATGCAGGGCGGTACCAGAAG...GATTAAAAGTAATTGTGGTTGGAGAAGATCTTGGCACTCTTGCTTGTTGTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCAGAAATACTTGGTTTTaGTACAAGCATGCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIRNTWF*YKHAWP Trigger: AGGCCAGGCATGCTTGTACCAAAACCAAGTATTTCT...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTAGAAATACTTGGTTTTaGTACAAGCATGCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSRNTWF*YKHAWP Trigger: AGGCCAGGCATGCTTGTACCAAAACCAAGTATTTCT...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAGAATCGAAATCCTCGTaGAATTTCACCTGGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPESKSS*NFTWMD Trigger: ATCCATCCAGGTGAAATTCCACGAGGATTTCGATTC...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038782.4 |
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| CDS-3UTR CCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCTGTAACACAGTTGCTTaGTCATGCCCGAATTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTCNTVA*SCPNSK Trigger: CTTTGAATTCGGGCATGACCAAGCAACTGTGTTACA...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTTGTAACACAGTTGCTTaGTCATGCCCGAATTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSCNTVA*SCPNSK Trigger: CTTTGAATTCGGGCATGACCAAGCAACTGTGTTACA...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTAGGTGGCCAGTTCCCTaGGTTTGGATGTATAAATTT | + |
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Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSRWPVP*VWMYKF Trigger: AAATTTATACATCCAAACCCAGGGAACTGGCCACCT...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCAGGTGGCCAGTTCCCTaGGTTTGGATGTATAAATTT | + |
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Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIRWPVP*VWMYKF Trigger: AAATTTATACATCCAAACCCAGGGAACTGGCCACCT...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTGTGAAGTCTCACAGCTaGAGAATCTATGGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSVKSHS*RIYGCC Trigger: ACAACATCCATAGATTCTCCAGCTGTGAGACTTCAC...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCGTGAAGTCTCACAGCTaGAGAATCTATGGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTVKSHS*RIYGCC Trigger: ACAACATCCATAGATTCTCCAGCTGTGAGACTTCAC...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR TCA 90 bp | TTTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCCCTGATTGTAAGAGTTaGAATGACAGAATCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FEIISVLFEYSDSKDIPIPDCKS*NDRILD Trigger: GTCCAGGATTCTGTCATTTCAACTCTTACAATCAGG...GATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
||
| CDS-3UTR TCA 90 bp | TTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCAGAAATAGGAATCTTGTaGCTAGAATCACCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSSQFCLSTQTVRTYPSEIGIL*LESPGW Trigger: CCATCCAGGTGATTCTAGTCACAAGATTCCTATTTC...TGATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTAAAACTGTGGAAATCTaGCATAATACCTTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSKTVEI*HNTFLE Trigger: CTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTT...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR GCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCAAAACTGTGGAAATCTaGCATAATACCTTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIKTVEI*HNTFLE Trigger: CTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTT...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR GCA 90 bp | ATACACAACAAGCAAGAGTGCCAAGATCTTCTCCAACCACAATTACTTTTAATCAGAAGTTCTAGATCTTaGCTTATTTCTGATGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNKQECQDLLQPQLLLIRSSRS*LISDAR Trigger: GCGGGCATCAGAAATAAGGCAAGATCTAGAACTTCT...GATTAAAAGTAATTGTGGTTGGAGAAGATCTTGGCACTCTTGCTTGTTGTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR GCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTAGTACGCGATTTTCTTaGAAACAGCTAAAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSSTRFS*KQLKHR Trigger: TCTGTGCTTTAGCTGTTTGCAAGAAAATCGCGTACT...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCTATGGATGTTGTTaGAGGAGTTTGAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTIYGCC*RSLRCS Trigger: AGAGCATCTCAAACTCCTCCAACAACATCCATAGAT...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCATCTATGGATGTTGTTaGAGGAGTTTGAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIIYGCC*RSLRCS Trigger: AGAGCATCTCAAACTCCTCCAACAACATCCATAGAT...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR TCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCCTCCAAGGAGAGCTTaGTCACTTTTTATAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTPPRRA*SLFIDK Trigger: TTTATCTATAAAAAGTGATCAAGCTCTCCTTGGAGG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR TCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCACCTCCAAGGAGAGCTTaGTCACTTTTTATAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPPPRRA*SLFIDK Trigger: TTTATCTATAAAAAGTGATCAAGCTCTCCTTGGAGG...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR TCA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCCCGAATTCAAAGTTTaGAATAGGAATCTTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTPEFKV*NRNLVT Trigger: AGTCACAAGATTCCTATTTCAAACTTTGAATTCGGG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTCCCGAATTCAAAGTTTaGAATAGGAATCTTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: DCSQKGSWLVIFPEIAQSPEFKV*NRNLVT Trigger: AGTCACAAGATTCCTATTTCAAACTTTGAATTCGGG...ACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR CCA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCACCAGTTCCCTGGGTTTaGATGTATAAATTTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPPVPWV*MYKFIE Trigger: CTCTATAAATTTATACATCCAAACCCAGGGAACTGG...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCGTGACTAGAATCACCTaGATGGATAAAACTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FEIISVLFEYSDSKDIPIVTRIT*MDKTVE Trigger: TTCCACAGTTTTATCCATCCAGGTGATTCTAGTCAC...GATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
||
| CDS-3UTR CCA 90 bp | ATAATACACAACAAGCAAGAGTGCCAAGATCTTCTCCAACCACAATTACTTTTACCAGTTCCCTGGGTTTaGATGTATAAATTTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIHNKQECQDLLQPQLLLPVPWV*MYKFIE Trigger: CTCTATAAATTTATACATCCAAACCCAGGGAACTGG...TAAAAGTAATTGTGGTTGGAGAAGATCTTGGCACTCTTGCTTGTTGTGTATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS TCA 90 bp | CCCAGAATCCTTTCCCTGGGCTGCTCTCCACTCTCGAGCCATTTCTaGGTATTTCTCCTTCTCATCCTCCCTCAAGAGCGCCCAGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRILSLGCSPLSSHF*VFLLLILPQERPVG Trigger: GCCGACTGGGCGCTCTTGAGGGAGGATGAGAAGGAGAAATACTCAGAAATGGCTCGAGAGTGGAGAGCAGCCCAGGGAAAGGATTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 90 bp | GTAGATACAAGTTTCTGCTTCTCTGAAGGCCCAGAATCCTTTCCCTaGGCTGCTCTCCACTCTCGAGCCATTTCTGAGTATTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VDTSFCFSEGPESFP*AALHSRAISEYFSF Trigger: GAAGGAGAAATACTCAGAAATGGCTCGAGAGTGGAGAGCAGCCCAGGGAAAGGATTCTGGGCCTTCAGAGAAGCAGAAACTTGTATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS CCA 90 bp | CAACTCTTAGCTTCTGGTACCGCCCTGCATCCAATACAACCATTTTaGGTGTCACACTGTTGCTGGCCTCATAGTCTTGTAGTGGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: QLLASGTALHPIQPF*VSHCCWPHSLVVVH Trigger: ATGTACCACTACAAGACTATGAGGCCAGCAACAGTGTGACACCCAAAATGGTTGTATTGGATGCAGGGCGGTACCAGAAGCTAAGAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 90 bp | ACCCATCTTTTTGGGGCGTGTAAGGTGAGAGTGAAGTCTCACAGCTaGAGAATCTATGGATGTTGTTGGAGGAGTTTGAGATGCTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: THLFGACKVRVKSHS*RIYGCCWRSLRCSL Trigger: TAGAGAGCATCTCAAACTCCTCCAACAACATCCATAGATTCTCCAGCTGTGAGACTTCACTCTCACCTTACACGCCCCAAAAAGATGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS CCA 90 bp | TCACCTGGATGGATAAAACTGTGGAAATCTGCCATAATACCTTCCTaGAGGGAGTATTTAACACAGCCAATTTCACAAGGGAGGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGWIKLWKSAIIPS*REYLTQPISQGRKR Trigger: GCGCTTCCTCCCTTGTGAAATTGGCTGTGTTAAATACTCCCTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTTATCCATCCAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCGAGAAATACTTGGTTTaGGTACAAGCATGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTEKYLV*VQACLA Trigger: GGCCAGGCATGCTTGTACCAAAACCAAGTATTTCTC...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCCAGGGGGAGAAATACTaGGTTTTGGTACAAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIQGEKY*VLVQAC Trigger: GCATGCTTGTACCAAAACCAAGTATTTCTCCCCCTG...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCCGCTTCAAACACCAGTaGACTCTGGCTCTATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SQKGSWLVIFPEIAQSTIRFKHQ*TLALSS Trigger: TGATGATAGAGCCAGAGTCAACTGGTGTTTGAAGCG...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCGCTTCAAACACCAGTaGACTCTGGCTCTATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTRFKHQ*TLALSS Trigger: TGATGATAGAGCCAGAGTCAACTGGTGTTTGAAGCG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAAAGGAGGAGAAAGGTTaGTACCCATCTTTTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPKEEKG*YPSFWG Trigger: GCCCCAAAAAGATGGGTACAAACCTTTCTCCTCCTT...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS GCA 90 bp | AAATCCTCGTGGAATTTCACCTGGATGGATAAAACTGTGGAAATCTaGCATAATACCTTCCTGGAGGGAGTATTTAACACAGCCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSSWNFTWMDKTVEI*HNTFLEGVFNTANF Trigger: GAAATTGGCTGTGTTAAATACTCCCTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTTATCCATCCAGGTGAAATTCCACGAGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038782.4 |
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| CDS-3UTR CAA 90 bp | TTGAAATCATCTCAGTTTTGTTTGAGTACTCAGACAGTAAGGACATACCCATCACAGGGGGAGAAATACTaGGTTTTGGTACAAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LKSSQFCLSTQTVRTYPSQGEKY*VLVQAC Trigger: GCATGCTTGTACCAAAACCAAGTATTTCTCCCCCTG...TGATGGGTATGTCCTTACTGTCTGAGTACTCAAACAAAACTGAGATGATTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | GTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCAGGTTTTGTAACACAGTaGCTTGGTCATGCCCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: VVRKEVGLLFFQKSHKVPGFVTQ*LGHARI Trigger: AATTCGGGCATGACCAAGCAACTGTGTTACAAAACC...TGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | TGTAGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCCTCCTTGAGGAATTTTaGCTGGTAGATCCCAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: CSQKGSWLVIFPEIAQSTLLEEF*LVDPNY Trigger: GTAGTTGGGATCTACCAGCAAAAATTCCTCAAGGAG...GGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | AGTCAGAAAGGAAGTTGGCTTGTTATTTTTCCAGAAATCGCACAAAGTACCATCTGTTGTTGGAGGAGTTaGAGATGCTCTCTAGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQKGSWLVIFPEIAQSTICCWRS*RCSLVS Trigger: GCTTACTAGAGAGCATCTCAAACTCCTCCAACAACA...GATGGTACTTTGTGCGATTTCTGGAAAAATAACAAGCCAACTTCCTTTCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS GCA 90 bp | AATCTTGTGACTAGAATCACCTGGATGGATAAAACTGTGGAAATCTaGCATAATACCTTCCTGGAGGGAGTATTTAACACAGCCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLVTRITWMDKTVEI*HNTFLEGVFNTANF Trigger: GAAATTGGCTGTGTTAAATACTCCCTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTTATCCATCCAGGTGATTCTAGTCACAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS-3UTR CAA 90 bp | ATAATACACAACAAGCAAGAGTGCCAAGATCTTCTCCAACCACAATTACTTTTAGAGAAATACTTGGTTTaGGTACAAGCATGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIHNKQECQDLLQPQLLLEKYLV*VQACLA Trigger: GGCCAGGCATGCTTGTACCAAAACCAAGTATTTCTC...TAAAAGTAATTGTGGTTGGAGAAGATCTTGGCACTCTTGCTTGTTGTGTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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| CDS TCA 72 bp | CTTTCCCTGGGCTGCTCTCCACTCTCGAGCCATTTCTaGGTATTTCTCCTTCTCATCCTCCCTCAAGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLGCSPLSSHF*VFLLLILPQER Trigger: GCGCTCTTGAGGGAGGATGAGAAGGAGAAATACTCAGAAATGGCTCGAGAGTGGAGAGCAGCCCAGGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS TCA 72 bp | CCTCCTCAGTGGTGTAGATACAAGTTTCTGCTTCTCTaGAGGCCCAGAATCCTTTCCCTGGGCTGCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPQWCRYKFLLL*RPRILSLGCSP Trigger: TGGAGAGCAGCCCAGGGAAAGGATTCTGGGCCTTCAGAGAAGCAGAAACTTGTATCTACACCACTGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 72 bp | AGTTTCTGCTTCTCTGAAGGCCCAGAATCCTTTCCCTaGGCTGCTCTCCACTCTCGAGCCATTTCTGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SFCFSEGPESFP*AALHSRAISEY Trigger: ATACTCAGAAATGGCTCGAGAGTGGAGAGCAGCCCAGGGAAAGGATTCTGGGCCTTCAGAGAAGCAGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 72 bp | GCTTCTGGTACCGCCCTGCATCCAATACAACCATTTTaGGTGTCACACTGTTGCTGGCCTCATAGTCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ASGTALHPIQPF*VSHCCWPHSLV Trigger: TACAAGACTATGAGGCCAGCAACAGTGTGACACCCAAAATGGTTGTATTGGATGCAGGGCGGTACCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CAA 72 bp | TCGCACCCAGGTCTTAGAGGGCTCCTTGAGGAATTTTaGCTGGTAGATCCCAACTACAAGGTCCTCTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SHPGLRGLLEEF*LVDPNYKVLYS Trigger: ACTGTAGAGGACCTTGTAGTTGGGATCTACCAGCAAAAATTCCTCAAGGAGCCCTCTAAGACCTGGGTGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS TCA 72 bp | CAGCCAATTTCACAAGGGAGGAAGCGCTGTTCACAATaGGGAGGTAGCTCACCATGGCTAAAAATGTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPISQGRKRCSQ*GGSSPWLKMFR Trigger: TCTGAACATTTTTAGCCATGGTGAGCTACCTCCTCATTGTGAACAGCGCTTCCTCCCTTGTGAAATTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS GCA 72 bp | CTGCATCCAATACAACCATTTTGGGTGTCACACTGTTaGTGGCCTCATAGTCTTGTAGTGGTACATGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHPIQPFWVSHC*WPHSLVVVHEL Trigger: GAGCTCATGTACCACTACAAGACTATGAGGCCAGCAACAGTGTGACACCCAAAATGGTTGTATTGGATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 72 bp | AGGGGGAGAAATACTTGGTTTTGGTACAAGCATGCCTaGCCTCCTCAGTGGTGTAGATACAAGTTTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGRNTWFWYKHA*PPQWCRYKFLL Trigger: AAGCAGAAACTTGTATCTACACCACTGAGGAGGCCAGGCATGCTTGTACCAAAACCAAGTATTTCTCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 72 bp | CATCCAATACAACCATTTTGGGTGTCACACTGTTGCTaGCCTCATAGTCTTGTAGTGGTACATGAGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPIQPFWVSHCC*PHSLVVVHELQ Trigger: CTGGAGCTCATGTACCACTACAAGACTATGAGGCCAGCAACAGTGTGACACCCAAAATGGTTGTATTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CAA 72 bp | GAGAGTGAAGTCTCACAGCTGGAGAATCTATGGATGTaGTTGGAGGAGTTTGAGATGCTCTCTAGTAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ESEVSQLENLWM*LEEFEMLSSKR Trigger: CCGCTTACTAGAGAGCATCTCAAACTCCTCCAACAACATCCATAGATTCTCCAGCTGTGAGACTTCACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CAA 72 bp | AGTGAAGTCTCACAGCTGGAGAATCTATGGATGTTGTaGGAGGAGTTTGAGATGCTCTCTAGTAAGCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SEVSQLENLWML*EEFEMLSSKRV Trigger: TACCCGCTTACTAGAGAGCATCTCAAACTCCTCCAACAACATCCATAGATTCTCCAGCTGTGAGACTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
||
| CDS CCA 72 bp | GACTCTGGCTCTATCATCAGACTTGCAGTAAATAGGTaGCCAGTTCCCTGGGTTTGGATGTATAAATTTATA | + |
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Preference number: 6 (lower is better) Translates to: DSGSIIRLAVNR*PVPWVWMYKFI Trigger: TATAAATTTATACATCCAAACCCAGGGAACTGGCCACCTATTTACTGCAAGTCTGATGATAGAGCCAGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038782.4 ENSMUST00000194057.6 |
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| CDS GCA 72 bp | TGGAATTTCACCTGGATGGATAAAACTGTGGAAATCTaGCATAATACCTTCCTGGAGGGAGTATTTAACACA | + |
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Preference number: 6 (lower is better) Translates to: WNFTWMDKTVEI*HNTFLEGVFNT Trigger: TGTGTTAAATACTCCCTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTTATCCATCCAGGTGAAATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038782.4 |
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| CDS GCA 72 bp | ACTAGAATCACCTGGATGGATAAAACTGTGGAAATCTaGCATAATACCTTCCTGGAGGGAGTATTTAACACA | + |
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Preference number: 6 (lower is better) Translates to: TRITWMDKTVEI*HNTFLEGVFNT Trigger: TGTGTTAAATACTCCCTCCAGGAAGGTATTATGGCAGATTTCCACAGTTTTATCCATCCAGGTGATTCTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194057.6 |
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