Pregenerated sensors for MAEA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079562Ensembl transcript IDs: ENSMUST00000114449.7, ENSMUST00000200716.3, ENSMUST00000200882.3
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTaGAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: AQVHVVHGALAAARQ*SQERPRHHVTSHCS Trigger: GCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR GCA 90 bp | AAAGCAGGAGATAAGGCGGTGCTGGAAGGTGAGATGCTGAACCTGTaGAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: KAGDKAVLEGEMLNL*RHSPRHWPRGQSLL Trigger: GAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGGTTCAGCATCTCACCTTCCAGCACCGCCTTATCTCCTGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR TCA 90 bp | ACATTCTCAAAGCAGGAGATAAGGCGGTGCTGGAAGGTGAGATGCTaGACCTGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: TFSKQEIRRCWKVRC*TCADTAPDTGHVGR Trigger: TCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGGTTCAGCATCTCACCTTCCAGCACCGCCTTATCTCCTGCTTTGAGAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR TCA 90 bp | ACCAACAGGAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTaGGTCCCATCACTAGCAAAAGGAAGGAAACGGAGAAACACAGGG | + |
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Preference number: 1 (lower is better) Translates to: TNRSWQRASLLLKLP*VPSLAKGRKRRNTG Trigger: CCCTGTGTTTCTCCGTTTCCTTCCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTCCTGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR GCA 90 bp | GGTGAACCTCCAGGTCACACTGTAGAGAAAGTTTCCTTTGAGAGGTaGAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAAATCCTA | + |
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Preference number: 1 (lower is better) Translates to: GEPPGHTVEKVSFER*KTLQRHRRLMLQIL Trigger: TAGGATTTGTAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTTCTCTACAGTGTGACCTGGAGGTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR GCA 90 bp | GACTTATTAAATCTCACTTCCTCTTTTTCTAAGAGTATTTGTCGTTaGTCACTGATCTTTGGTCGCAAGAAACAAATGTCGATGCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: DLLNLTSSFSKSICR*SLIFGRKKQMSMQA Trigger: AGCCTGCATCGACATTTGTTTCTTGCGACCAAAGATCAGTGAGCAACGACAAATACTCTTAGAAAAAGAGGAAGTGAGATTTAATAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTAAGAGGTGCAAGACCCTaGAGAGGCATCGTCGACTTA | + |
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Preference number: 2 (lower is better) Translates to: PVQTQPQTLATWAEPPQVRGARP*RGIVDL Trigger: TAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCT...TACTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCTAGACAGTGAAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTAATGTCGATGCAGGCTaGGGTCTGGGGTCAGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: QQLDSEVRKGLGTTSQVTNVDAG*GLGSGV Trigger: GACCCCTGACCCCAGACCCCAGCCTGCATCGACATT...AGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTTCACTGTCTAGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTGACCAACAGGAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGGTTTCCTTTGAGAGGTaGAAGACCCTGCAGAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SCDQQELAKGQPAPQAPLVSFER*KTLQRH Trigger: ATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAAC...CAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTCCTGTTGGTCACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTTCCTTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAGGGCAGGAGGGCATaGCTCCCACCCACCACCGCC | + |
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Preference number: 2 (lower is better) Translates to: KVSFERCKTLQRHRRLMLQGRRA*LPPTTA Trigger: GGCGGTGGTGGGTGGGAGCCATGCCCTCCTGCCCTG...TAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGTTCTGGATTTCCTGGGTaGACCTCCAGGTCACACTGT | + |
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Preference number: 2 (lower is better) Translates to: KSGKASAPRHKSLQPTWCSGFPG*TSRSHC Trigger: ACAGTGTGACCTGGAGGTTCACCCAGGAAATCCAGA...ACACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTAGCACCAATTCCTACTTCTaGGATGCTCTGGATTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CADTAPDTGHVGRASSSSTNSYF*DALDFL Trigger: CAGGAAATCCAGAGCATCTCAGAAGTAGGAATTGGT...GCTACTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCAAAAGGATGCTCTGGATTTCCTaGGTGAACCTCCAGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: AKGQPAPQAPLSPITSKRMLWIS*VNLQVT Trigger: TGTGACCTGGAGGTTCACCCAGGAAATCCAGAGCAT...CCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTATTGCTCACTGATCTTTaGTCGCAAGAAACAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: PVQTQPQTLATWAEPPQVLLTDL*SQETNV Trigger: GACATTTGTTTCTTGCGACCAAAGATCAGTGAGCAA...TACTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR CCA 90 bp | ACCACACCATCCAATAGGCTGACCACAGAGTCCACAGCTGGGCAACTACTCAAGACCACCATGGTGACGTaGCTAGTCTCTCGATCGATG | + |
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Preference number: 2 (lower is better) Translates to: TTPSNRLTTESTAGQLLKTTMVT*LVSRSM Trigger: CATCGATCGAGAGACTAGCCACGTCACCATGGTGGT...CTTGAGTAGTTGCCCAGCTGTGGACTCTGTGGTCAGCCTATTGGATGGTGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGTAATGAAAAGCATGTACACTCTAGGACTACGGAACCACCTGGCAAGGCCTTGGAAGGTGAGATGCTaGACCTGTGCAGACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SVMKSMYTLGLRNHLARPWKVRC*TCADTA Trigger: GGCTGTGTCTGCACAGGTTCAGCATCTCACCTTCCA...AGGCCTTGCCAGGTGGTTCCGTAGTCCTAGAGTGTACATGCTTTTCATTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTTCCTTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTAAGAAACAAATGTCGATaGAGGCTGGGGTCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KVSFERCKTLQRHRRLMLRNKCR*RLGSGV Trigger: GACCCCAGACCCCAGCCTGCATCGACATTTGTTTCT...TAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGTAATGAAAAGCATGTACACTCTAGGACTACGGAACCACCTGGCAAGGCCTACTTCTGAGATGCTCTaGATTTCCTGGGTGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: SVMKSMYTLGLRNHLARPTSEML*ISWVNL Trigger: GAGGTTCACCCAGGAAATCCAGAGCATCTCAGAAGT...AGGCCTTGCCAGGTGGTTCCGTAGTCCTAGAGTGTACATGCTTTTCATTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR GCA 72 bp | AGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTaGAGCCAACCTGGTGTGGCCAGCACCTTGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SQERPRHHVTSH*SQPGVASTLPK Trigger: CTTGGGCAAGGTGCTGGCCACACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR GCA 72 bp | GATAAGGCGGTGCTGGAAGGTGAGATGCTGAACCTGTaGAGACACAGCCCCAGACACTGGCCACGTGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: DKAVLEGEMLNL*RHSPRHWPRGQ Trigger: CTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGGTTCAGCATCTCACCTTCCAGCACCGCCTTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR TCA 72 bp | CATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTaGAGTCAGGAAAGGCCTCGGCACCACGTCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: HVVHGALAAARQ*SQERPRHHVTS Trigger: ACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR TCA 72 bp | AAGCAGGAGATAAGGCGGTGCTGGAAGGTGAGATGCTaGACCTGTGCAGACACAGCCCCAGACACTGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: KQEIRRCWKVRC*TCADTAPDTGH Trigger: GTGGCCAGTGTCTGGGGCTGTGTCTGCACAGGTTCAGCATCTCACCTTCCAGCACCGCCTTATCTCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR TCA 72 bp | AGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTaGGTCCCATCACTAGCAAAAGGAAGGAAACGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SWQRASLLLKLP*VPSLAKGRKRR Trigger: TCTCCGTTTCCTTCCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR GCA 72 bp | CCAGGTCACACTGTAGAGAAAGTTTCCTTTGAGAGGTaGAAGACCCTGCAGAGGCATCGTCGACTTATGTTA | + |
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Preference number: 3 (lower is better) Translates to: PGHTVEKVSFER*KTLQRHRRLML Trigger: TAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTTCTCTACAGTGTGACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| 3UTR TCA 72 bp | CTTCCTCTTTTTCTAAGAGTATTTGTCGTTGCTCACTaGTCTTTGGTCGCAAGAAACAAATGTCGATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LPLFLRVFVVAH*SLVARNKCRCR Trigger: CCTGCATCGACATTTGTTTCTTGCGACCAAAGATCAGTGAGCAACGACAAATACTCTTAGAAAAAGAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | TGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTAGCCGGGAGTTGGCACAGTaGGCCATGGGCAGGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CADTAPDTGHVGRASSSSRELAQ*AMGRGC Trigger: ACAGCCCCTGCCCATGGCTCACTGTGCCAACTCCCG...GCTACTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | AGCTGTGACCAACAGGAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGGGTCATGGACAGCTaGGCCGCCGACTCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: SCDQQELAKGQPAPQAPLRVMDS*AADSCT Trigger: GGTGCAGGAGTCGGCGGCCCAGCTGTCCATGACCCT...CAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTCCTGTTGGTCACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | TGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTAGCACCAGGCAAGGCAGGTaGCTGTCTCACGCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CADTAPDTGHVGRASSSSTRQGR*LSHASP Trigger: TGGAGAGGCGTGAGACAGCCACCTGCCTTGCCTGGT...GCTACTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGCCACATGCTGGCTGCTaGTGGCTGGTCACTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PRCMWCTALWQQLDSEVRPHAGC*WLVTAV Trigger: CACAGCAGTGACCAGCCAGCAGCAGCCAGCATGTGG...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGCATTCGCCACCGGGCTaGGTCCAGGAGGTCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: PRCMWCTALWQQLDSEVRHSPPG*VQEVLV Trigger: TACAAGGACCTCCTGGACCCAGCCCGGTGGCGAATG...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | CAAGCTGTGACCAACAGGAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCGGTGAGGGTGAAGACTaGGCTGTTTCCCAGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QAVTNRSWQRASLLLKLPGEGED*AVSQLV Trigger: CACCAGCTGGGAAACAGCTCAGTCTTCACCCTCACC...GGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTCCTGTTGGTCACAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGGGCTGGTCACTGCTGTaGTCCTTGAGGTGCTCGATC | + |
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Preference number: 4 (lower is better) Translates to: PRCMWCTALWQQLDSEVRGWSLL*SLRCSI Trigger: GATCGAGCACCTCAAGGAGCACAGCAGTGACCAGCC...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGCCATCATCCGGTCCATaGGCTTCCGCTTCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: PRCMWCTALWQQLDSEVRPSSGP*ASASTC Trigger: GCATGTGGAAGCGGAAGCGCATGGACCGGATGATGG...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | AACCTGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGCATCCTCGGCCTGGATaGACTCTACTGCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: NLCRHSPRHWPRGQSLLKHPRPG*TLLPSS Trigger: AGAGGAAGGCAGTAGAGTCCATCCAGGCCGAGGATG...CTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | GAAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGCTGGCTGCTGCTGGCTaGTCACTGCTGTGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EVRKGLGTTSQVTAANLVLAAAG*SLLCSL Trigger: CAAGGAGCACAGCAGTGACCAGCCAGCAGCAGCCAG...CACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCAAAAGGAGACCAGGCGGGAGTTaGCACAGTGAGCCATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AKGQPAPQAPLSPITSKRRPGGS*HSEPWA Trigger: TGCCCATGGCTCACTGTGCCAACTCCCGCCTGGTCT...CCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | CAAGCTGTGACCAACAGGAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGGTGTCTTTATTGCTaGGAGCCCAGCCTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QAVTNRSWQRASLLLKLPWCLYC*EPSLQG Trigger: ACCCTGCAGGCTGGGCTCTCAGCAATAAAGACACCA...GGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTCCTGTTGGTCACAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | CCTGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTAGCTCGATCCTACGTTTaGAGAGCTTGGCGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PVQTQPQTLATWAEPPQVARSYV*RAWRSH Trigger: ATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGC...TACTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CACAGAGTCCACAGCTGGGCAACTACTCAAGGTCTTCTCAAGCTCAGCTACCACAGGGTCATGGACAGCTaGGCCGCCGACTCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: HRVHSWATTQGLLKLSYHRVMDS*AADSCT Trigger: GGTGCAGGAGTCGGCGGCCCAGCTGTCCATGACCCT...GTGGTAGCTGAGCTTGAGAAGACCTTGAGTAGTTGCCCAGCTGTGGACTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS-3UTR TCA 90 bp | AACCTGTGCAGACACAGCCCCAGACACTGGCCACGTGGGCAGAGCCTCCTCAAGTCCCTTCAGCCTGACTaGAGTGCTTTCTTGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: NLCRHSPRHWPRGQSLLKSLQPD*SAFLHV Trigger: GACATGCAAGAAAGCACTTCAGTCAGGCTGAAGGGA...CTTGAGGAGGCTCTGCCCACGTGGCCAGTGTCTGGGGCTGTGTCTGCACAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | GAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCTGGCTCCCTTCAGCCTaGCTGAAGTGCTTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: ELAKGQPAPQAPLSPITSWLPSA*LKCFLA Trigger: TGCAAGAAAGCACTTCAGTCAGGCTGAAGGGAGCCA...GCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGTGGCCCTGGATGGACTCTACTaGCTTCCTCTTGAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: QERPRHHVTSHCSQPGVALDGLY*LPLEDT Trigger: AGTGTCCTCAAGAGGAAGGCAGTAGAGTCCATCCAG...GGCCACACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGACCACCATGGTGACGTaGCTAGTCTCTCGATCGATG | + |
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Preference number: 4 (lower is better) Translates to: PRCMWCTALWQQLDSEVRTTMVT*LVSRSM Trigger: CATCGATCGAGAGACTAGCCACGTCACCATGGTGGT...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | TGCTCACTGATCTTTGGTCGCAAGAAACAAATGTCGATGCAGGCTGGGGTCTGGGCACCTTCAGGGTCATaGACAGCTGGGCCGCCGACT | + |
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Preference number: 4 (lower is better) Translates to: CSLIFGRKKQMSMQAGVWAPSGS*TAGPPT Trigger: AGTCGGCGGCCCAGCTGTCCATGACCCTGAAGGTGC...CCAGACCCCAGCCTGCATCGACATTTGTTTCTTGCGACCAAAGATCAGTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | GAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCCACAGAGTCCACAGCTaGGCAACTACTCAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ELAKGQPAPQAPLSPITSHRVHS*ATTQGL Trigger: AAGACCTTGAGTAGTTGCCCAGCTGTGGACTCTGTG...GCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGTGGCCACTCCTCCACTTCTTTaGCTGTCAGGAACATCTCGA | + |
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Preference number: 4 (lower is better) Translates to: QERPRHHVTSHCSQPGVATPPLL*LSGTSR Trigger: TCGAGATGTTCCTGACAGCCAAAGAAGTGGAGGAGT...GGCCACACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | AAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGTCGGGACTTGTTATCATaGCACCAGGCAAGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KSGKASAPRHKSLQPTWCRDLLS*HQARQV Trigger: CACCTGCCTTGCCTGGTGCCATGATAACAAGTCCCG...ACACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | AGGCTGACCACAGAGTCCACAGCTGGGCAACTACTCAAGGTCTTCTCAAGCTCAAGGGTCGGGTACTCCTaGACCTTCAGGGTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLTTESTAGQLLKVFSSSRVGYS*TFRVMD Trigger: GTCCATGACCCTGAAGGTGCAGGAGTACCCGACCCT...TGAGCTTGAGAAGACCTTGAGTAGTTGCCCAGCTGTGGACTCTGTGGTCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS-3UTR GCA 90 bp | CCAATTCCTACTTCTGAGATGCTCTGGATTTCCTGGGTGAACCTCCAGGTCACATGTTCAGAGAGCGGCTaGACACAGGGCAGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIPTSEMLWISWVNLQVTCSESG*TQGSQG Trigger: GCCCTGACTGCCCTGTGTGCAGCCGCTCTCTGAACA...TGTGACCTGGAGGTTCACCCAGGAAATCCAGAGCATCTCAGAAGTAGGAATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | GGTGAACCTCCAGGTCACACTGTAGAGAAAGTTTCCTTTGAGAGGTGCAAGACCTCTCATAGGGCACCTTaGGGGTCGGGTACTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEPPGHTVEKVSFERCKTSHRAP*GSGTPA Trigger: TGCAGGAGTACCCGACCCTCAAGGTGCCCTATGAGA...GGTCTTGCACCTCTCAAAGGAAACTTTCTCTACAGTGTGACCTGGAGGTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | TCTGTAATGAAAAGCATGTACACTCTAGGACTACGGAACCACCTGGCAAGGCCTGCTTCCGCTTCCACATaGTGGCTGCTGCTGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SVMKSMYTLGLRNHLARPASAST*WLLLAG Trigger: ACCAGCCAGCAGCAGCCAGCATGTGGAAGCGGAAGC...AGGCCTTGCCAGGTGGTTCCGTAGTCCTAGAGTGTACATGCTTTTCATTACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCAAAAGGACTGAAGTGCTTTCTTaGATGTCTCACAGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKGQPAPQAPLSPITSKRTEVLS*MSHSIQ Trigger: CTGGATGCTGTGAGACATGCAAGAAAGCACTTCAGT...CCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | CCAATTCCTACTTCTGAGATGCTCTGGATTTCCTGGGTGAACCTCCAGGTCACACGTCACCAGAGATCTTaGAGACCAGGCGGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIPTSEMLWISWVNLQVTRHQRS*RPGGSW Trigger: CCAACTCCCGCCTGGTCTGCAAGATCTCTGGTGACG...TGTGACCTGGAGGTTCACCCAGGAAATCCAGAGCATCTCAGAAGTAGGAATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CTCTCGATCGATGTTTTTCTGAGCAGCTCGGAAGCGTTTGTTCAGTGTCTCATAGCACCTTCAGGGTCATaGACAGCTGGGCCGCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSIDVFLSSSEAFVQCLIAPSGS*TAGPPT Trigger: AGTCGGCGGCCCAGCTGTCCATGACCCTGAAGGTGC...TATGAGACACTGAACAAACGCTTCCGAGCTGCTCAGAAAAACATCGATCGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS-3UTR CCA 90 bp | CCACAGAGTCCACAGCTGGGCAACTACTCAAGGTCTTCTCAAGCTCAGCTACCACAGTGGATGAAGTACTaGCTTGAGGGTCGGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: PQSPQLGNYSRSSQAQLPQWMKY*LEGRVL Trigger: GAGTACCCGACCCTCAAGCCAGTACTTCATCCACTG...TGGTAGCTGAGCTTGAGAAGACCTTGAGTAGTTGCCCAGCTGTGGACTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS-3UTR CCA 90 bp | TTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAAATCCTACATGCTGGCTGCTGCTaGCTGGTCACTGCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FERCKTLQRHRRLMLQILHAGCC*LVTAVL Trigger: GAGCACAGCAGTGACCAGCCAGCAGCAGCCAGCATG...TAGGATTTGTAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | TTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAAATCCTATGGCACAGTGAGCCATaGGCAGGGGCTGTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FERCKTLQRHRRLMLQILWHSEP*AGAVPV Trigger: AACTGGCACAGCCCCTGCCCATGGCTCACTGTGCCA...TAGGATTTGTAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | TTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAAATCCTACTTCCACATGCTGGCTaGTGCTGGCTGGTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FERCKTLQRHRRLMLQILLPHAG*CWLVTA Trigger: AGCAGTGACCAGCCAGCAGCAGCCAGCATGTGGAAG...TAGGATTTGTAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR GCA 90 bp | TTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAAATCCTACATGGGCAGGGGCTGTaGCAGTTTGTTCAGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FERCKTLQRHRRLMLQILHGQGL*QFVQRA Trigger: CGCTCTCTGAACAAACTGGCACAGCCCCTGCCCATG...TAGGATTTGTAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | GAGTTGGCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCGACTTCTTTGGTTCTTaGGCAAACAACTTTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: ELAKGQPAPQAPLSPITSDFFGS*ANNFII Trigger: GATGATAAAGTTGTTTGCCCAAGAACCAAAGAAGTC...GCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | AAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGTTCAGCTTGGGAGAAGTaGAAGACTTCTTTGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSGKASAPRHKSLQPTWCSAWEK*KTSLVL Trigger: AAGAACCAAAGAAGTCTTCCACTTCTCCCAAGCTGA...ACACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCAAAAGGTATACTTTCTCAGCTTaGGAGAAGTGGAAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKGQPAPQAPLSPITSKRYTFSA*EKWKTS Trigger: AGAAGTCTTCCACTTCTCCCAAGCTGAGAAAGTATA...CCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | TTGTCGTTGCTCACTGATCTTTGGTCGCAAGAAACAAATGTCGATGCAGGCTGGGGAGATATGTGTGTCTaGTGGGAAGGCCAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLTDLWSQETNVDAGWGDMCV*WEGQHA Trigger: GGCATGTTGGCCTTCCCACCAGACACACATATCTCC...CCAGCCTGCATCGACATTTGTTTCTTGCGACCAAAGATCAGTGAGCAACGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CCAATTCCTACTTCTGAGATGCTCTGGATTTCCTGGGTGAACCTCCAGGTCACACAGGAGGTCCTTGTATaGGGAGATATGTGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIPTSEMLWISWVNLQVTQEVLV*GDMCVW Trigger: CCAGACACACATATCTCCCCATACAAGGACCTCCTG...TGTGACCTGGAGGTTCACCCAGGAAATCCAGAGCATCTCAGAAGTAGGAATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCCTTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACTACTGCCTTCCTCTTaGGGACACTCAGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVSFERCKTLQRHRRLMLLLPSS*GHSASP Trigger: TGGAGAAGCTGAGTGTCCTCAAGAGGAAGGCAGTAG...TAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | AGGAAGGAAACGGAGAAACACAGGGAAATAACCGATGAACCAATTCCTACTTCTCACCATCCAATAGGCTaGCCACAGAGTCCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKETEKHREITDEPIPTSHHPIG*PQSPQL Trigger: CAGCTGTGGACTCTGTGGTCAGCCTATTGGATGGTG...AGAAGTAGGAATTGGTTCATCGGTTATTTCCCTGTGTTTCTCCGTTTCCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | CCAATTCCTACTTCTGAGATGCTCTGGATTTCCTGGGTGAACCTCCAGGTCACAAGGCAGCATCATGGGTaGGTTATTCTCATTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIPTSEMLWISWVNLQVTRQHHG*VILIHH Trigger: GTGATGAATGAGAATAACCCACCCATGATGCTGCCT...TGTGACCTGGAGGTTCACCCAGGAAATCCAGAGCATCTCAGAAGTAGGAATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCAGCTACCACCATGGTGACGTGGCTAGTCTCTCGATCGATGTTTTTCAACAACACAGTGCAGTaGATGAAGTACTGGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSATTMVTWLVSRSMFFNNTVQ*MKYWLE Trigger: CTCAAGCCAGTACTTCATCCACTGCACTGTGTTGTT...GAAAAACATCGATCGAGAGACTAGCCACGTCACCATGGTGGTAGCTGAGCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS-3UTR GCA 90 bp | ACAAATCCTACCAATCAAACGCTGTTCTCAAGCACAGACTTATTAAATCTCACTAGGGTCGGGTACTCCTaGACCTTCAGGGTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TNPTNQTLFSSTDLLNLTRVGYS*TFRVMD Trigger: GTCCATGACCCTGAAGGTGCAGGAGTACCCGACCCT...AGTGAGATTTAATAAGTCTGTGCTTGAGAACAGCGTTTGATTGGTAGGATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR TCA 90 bp | ACAAATCCTACCAATCAAACGCTGTTCTCAAGCACAGACTTATTAAATCTCACTCACTGCTGTGCTCCTTaGGGTGCTCGATCCTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: TNPTNQTLFSSTDLLNLTHCCAP*GARSYV Trigger: AACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTG...AGTGAGATTTAATAAGTCTGTGCTTGAGAACAGCGTTTGATTGGTAGGATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | TGGCTCCCACCCACCACCGCCTCTGGCCAAGGGCGTGCCCATAGCAACTCGGGGCTACGTTTGCAGAGCTaGGCGCTCTCATCCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: WLPPTTASGQGRAHSNSGLRLQS*ALSSSA Trigger: GGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAG...CCCCGAGTTGCTATGGGCACGCCCTTGGCCAGAGGCGGTGGTGGGTGGGAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | GGCAGGAGGGCATGGCTCCCACCCACCACCGCCTCTGGCCAAGGGCGTGCCCATTCACTGCTGTGCTCCTaGAGGTGCTCGATCCTACGT | + |
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Preference number: 5 (lower is better) Translates to: GRRAWLPPTTASGQGRAHSLLCS*RCSILR Trigger: ACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGA...ATGGGCACGCCCTTGGCCAGAGGCGGTGGTGGGTGGGAGCCATGCCCTCCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS GCA 90 bp | GCAGACCAGGCGGGAGTTGGCACAGTGAGCCATGGGCAGGGGCTGTaGCAGTTTGTTCAGAGAGCGGCTGCACACAGGGCAGTCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: ADQAGVGTVSHGQGL*QFVQRAAAHRAVRA Trigger: AGCCCTGACTGCCCTGTGTGCAGCCGCTCTCTGAACAAACTGGCACAGCCCCTGCCCATGGCTCACTGTGCCAACTCCCGCCTGGTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | GGCAGGAGGGCATGGCTCCCACCCACCACCGCCTCTGGCCAAGGGCGTGCCCATTCTACTGCCTTCCTCTaGAGGACACTCAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRAWLPPTTASGQGRAHSTAFL*RTLSFS Trigger: GGAGAAGCTGAGTGTCCTCAAGAGGAAGGCAGTAGA...ATGGGCACGCCCTTGGCCAGAGGCGGTGGTGGGTGGGAGCCATGCCCTCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS GCA 90 bp | CACCATCATCCGGTCCATGCGCTTCCGCTTCCACATGCTGGCTGCTaGTGGCTGGTCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACG | + |
|
Preference number: 5 (lower is better) Translates to: HHHPVHALPLPHAGC*WLVTAVLLEVLDPT Trigger: CGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGACCAGCCAGCAGCAGCCAGCATGTGGAAGCGGAAGCGCATGGACCGGATGATGGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114449.7 ENSMUST00000200716.3 |
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| CDS GCA 90 bp | CTCCACCATCATCCGGTCCATGCGCTTCCGCTTCCACATGCTGGCTaGTGCTGGCTGGTCACTGCTGTGCTCCTTGAGGTGCTCGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHHHPVHALPLPHAG*CWLVTAVLLEVLDP Trigger: AGGATCGAGCACCTCAAGGAGCACAGCAGTGACCAGCCAGCAGCAGCCAGCATGTGGAAGCGGAAGCGCATGGACCGGATGATGGTGGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114449.7 ENSMUST00000200716.3 |
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| CDS CCA 90 bp | CCGGGCTGGGTCCAGGAGGTCCTTGTATGGGGAGATATGTGTGTCTaGTGGGAAGGCCAACATGCCCATGACCTGGCGGACCTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGWVQEVLVWGDMCV*WEGQHAHDLADLIQ Trigger: CTGGATGAGGTCCGCCAGGTCATGGGCATGTTGGCCTTCCCACCAGACACACATATCTCCCCATACAAGGACCTCCTGGACCCAGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 90 bp | CTGGATCAGCATTCGCCACCGGGCTGGGTCCAGGAGGTCCTTGTATaGGGAGATATGTGTGTCTGGTGGGAAGGCCAACATGCCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDQHSPPGWVQEVLV*GDMCVWWEGQHAHD Trigger: GTCATGGGCATGTTGGCCTTCCCACCAGACACACATATCTCCCCATACAAGGACCTCCTGGACCCAGCCCGGTGGCGAATGCTGATCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGTGCTCGATCCTACGTTaGCAGAGCTTGGCGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRCMWCTALWQQLDSEVRCSILR*QSLALS Trigger: TGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCA...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | CCCAGGTGCATGTGGTGCACGGCGCTTTGGCAGCAGCTAGACAGTGAAGTCAGGTTCCGGAGTCGGGACTaGTTATCATGGCACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRCMWCTALWQQLDSEVRFRSRD*LSWHQA Trigger: TGCCTGGTGCCATGATAACAAGTCCCGACTCCGGAA...CCTGACTTCACTGTCTAGCTGCTGCCAAAGCGCCGTGCACCACATGCACCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS TCA 90 bp | ATGCCCATGACCTGGCGGACCTCATCCAGCTGGCTCCCTTCAGCCTaGCTGAAGTGCTTTCTTGCATGTCTCACAGCATCCAGGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MPMTWRTSSSWLPSA*LKCFLACLTASRRL Trigger: CAAGCGCCTGGATGCTGTGAGACATGCAAGAAAGCACTTCAGTCAGGCTGAAGGGAGCCAGCTGGATGAGGTCCGCCAGGTCATGGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 90 bp | TCTTCCGGAGTCGGGACTTGTTATCATGGCACCAGGCAAGGCAGGTaGCTGTCTCACGCCTCTCCAAGGACTCCTCCACTTCTTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGVGTCYHGTRQGR*LSHASPRTPPLLWL Trigger: CAGCCAAAGAAGTGGAGGAGTCCTTGGAGAGGCGTGAGACAGCCACCTGCCTTGCCTGGTGCCATGATAACAAGTCCCGACTCCGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS GCA 90 bp | GCATCATGGGTGGGTTATTCTCATTCATCACGTCACCAGAGATCTTaGAGACCAGGCGGGAGTTGGCACAGTGAGCCATGGGCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASWVGYSHSSRHQRS*RPGGSWHSEPWAGA Trigger: AGCCCCTGCCCATGGCTCACTGTGCCAACTCCCGCCTGGTCTGCAAGATCTCTGGTGACGTGATGAATGAGAATAACCCACCCATGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 90 bp | AACTCTAGGCAGCTCTTCATCTTCCGGAGTCGGGACTTGTTATCATaGCACCAGGCAAGGCAGGTGGCTGTCTCACGCCTCTCCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSRQLFIFRSRDLLS*HQARQVAVSRLSKD Trigger: GTCCTTGGAGAGGCGTGAGACAGCCACCTGCCTTGCCTGGTGCCATGATAACAAGTCCCGACTCCGGAAGATGAAGAGCTGCCTAGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | GCAAAGGGCCAGCCTGCTCCTCAAGCTCCCCTGAGTCCCATCACTAGCAAAAGGGACTCCTCCACTTCTTaGGCTGTCAGGAACATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AKGQPAPQAPLSPITSKRDSSTS*AVRNIS Trigger: CGAGATGTTCCTGACAGCCAAAGAAGTGGAGGAGTC...CCTTTTGCTAGTGATGGGACTCAGGGGAGCTTGAGGAGCAGGCTGGCCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS GCA 90 bp | GACCTCATCCAGCTGGCTCCCTTCAGCCTGACTGAAGTGCTTTCTTaGATGTCTCACAGCATCCAGGCGCTTGTTCTGCCGGACAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLIQLAPFSLTEVLS*MSHSIQALVLPDKF Trigger: GAACTTGTCCGGCAGAACAAGCGCCTGGATGCTGTGAGACATGCAAGAAAGCACTTCAGTCAGGCTGAAGGGAGCCAGCTGGATGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 90 bp | GGCAGGTGGCTGTCTCACGCCTCTCCAAGGACTCCTCCACTTCTTTaGCTGTCAGGAACATCTCGATATTCACAAGGTCCTCGATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRWLSHASPRTPPLL*LSGTSRYSQGPRCH Trigger: GTGGCATCGAGGACCTTGTGAATATCGAGATGTTCCTGACAGCCAAAGAAGTGGAGGAGTCCTTGGAGAGGCGTGAGACAGCCACCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS TCA 90 bp | CAGAGTTTCCATGAACAACACAGTGCAGTGGATGAAGTACTGGCTTaGGGGTCGGGTACTCCTGCACCTTCAGGGTCATGGACAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSFHEQHSAVDEVLA*GSGTPAPSGSWTAG Trigger: CCCAGCTGTCCATGACCCTGAAGGTGCAGGAGTACCCGACCCTCAAGCCAGTACTTCATCCACTGCACTGTGTTGTTCATGGAAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS CCA 90 bp | GTAGTTATCATATCGAAACTGCTGGATCAGCATTCGCCACCGGGCTaGGTCCAGGAGGTCCTTGTATGGGGAGATATGTGTGTCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVIISKLLDQHSPPG*VQEVLVWGDMCVWW Trigger: CCACCAGACACACATATCTCCCCATACAAGGACCTCCTGGACCCAGCCCGGTGGCGAATGCTGATCCAGCAGTTTCGATATGATAACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | GAAGTCAGGAAAGGCCTCGGCACCACGTCACAAGTCACTGCAGCCAACCTGGTGGTATACTTTCTCAGCTaGGGAGAAGTGGAAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVRKGLGTTSQVTAANLVVYFLS*GEVEDF Trigger: GAAGTCTTCCACTTCTCCCAAGCTGAGAAAGTATAC...CACCAGGTTGGCTGCAGTGACTTGTGACGTGGTGCCGAGGCCTTTCCTGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 90 bp | TTCAGCAGAGTTTCCATGAACAACACAGTGCAGTGGATGAAGTACTaGCTTGAGGGTCGGGTACTCCTGCACCTTCAGGGTCATGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSRVSMNNTVQWMKY*LEGRVLLHLQGHGQ Trigger: CTGTCCATGACCCTGAAGGTGCAGGAGTACCCGACCCTCAAGCCAGTACTTCATCCACTGCACTGTGTTGTTCATGGAAACTCTGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS-3UTR CAA 90 bp | TTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTACAAATCCTAAGGGGCTGTGCCAGTTaGTTCAGAGAGCGGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FERCKTLQRHRRLMLQILRGCAS*FRERLH Trigger: GTGCAGCCGCTCTCTGAACAAACTGGCACAGCCCCT...TAGGATTTGTAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | AAAGTTTCCTTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTAACGTCACCAGAGATCTaGCAGACCAGGCGGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KVSFERCKTLQRHRRLMLTSPEI*QTRREL Trigger: CAACTCCCGCCTGGTCTGCAAGATCTCTGGTGACGT...TAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 90 bp | CAGAGAATTGTAGCCATAGACATAGCCATTAGGCAGCATCATGGGTaGGTTATTCTCATTCATCACGTCACCAGAGATCTTGCAGACCAG | + |
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Preference number: 5 (lower is better) Translates to: QRIVAIDIAIRQHHG*VILIHHVTRDLADQ Trigger: CTGGTCTGCAAGATCTCTGGTGACGTGATGAATGAGAATAACCCACCCATGATGCTGCCTAATGGCTATGTCTATGGCTACAATTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS-3UTR CAA 90 bp | AAAGTTTCCTTTGAGAGGTGCAAGACCCTGCAGAGGCATCGTCGACTTATGTTAAAGTGGAAGACTTCTTaGGTTCTTGGGCAAACAACT | + |
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Preference number: 5 (lower is better) Translates to: KVSFERCKTLQRHRRLMLKWKTS*VLGQTT Trigger: AGTTGTTTGCCCAAGAACCAAAGAAGTCTTCCACTT...TAACATAAGTCGACGATGCCTCTGCAGGGTCTTGCACCTCTCAAAGGAAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS GCA 72 bp | GCTGCTGCTGGCTGGTCACTGCTGTGCTCCTTGAGGTaGTCGATCCTACGTTTGCAGAGCTTGGCGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AAAGWSLLCSLR*SILRLQSLALS Trigger: TGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGACCAGCCAGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114449.7 ENSMUST00000200716.3 |
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| CDS CAA 90 bp | GCTGGCTGGTCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACGTTaGCAGAGCTTGGCGCTCTCATCCTCGGCCTGGATGGACTCTACT | + |
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Preference number: 6 (lower is better) Translates to: AGWSLLCSLRCSILR*QSLALSSSAWMDST Trigger: AGTAGAGTCCATCCAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGACCAGCCAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 90 bp | AACTGCTGGATCAGCATTCGCCACCGGGCTGGGTCCAGGAGGTCCTaGTATGGGGAGATATGTGTGTCTGGTGGGAAGGCCAACATGCCC | + |
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Preference number: 6 (lower is better) Translates to: NCWISIRHRAGSRRS*YGEICVSGGKANMP Trigger: GGGCATGTTGGCCTTCCCACCAGACACACATATCTCCCCATACAAGGACCTCCTGGACCCAGCCCGGTGGCGAATGCTGATCCAGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 90 bp | GCTGGCTGGTCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACGTTaGCAGAGCTTGGCGCTCTCATCCTCGGCCTTCCTCTTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: AGWSLLCSLRCSILR*QSLALSSSAFLLRT Trigger: TGTCCTCAAGAGGAAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGACCAGCCAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200716.3 |
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| CDS CAA 90 bp | TCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACGTTTGCAGAGCTaGGCGCTCTCATCCTCGGCCTGGATGGACTCTACTGCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLCSLRCSILRLQS*ALSSSAWMDSTAFL Trigger: GAGGAAGGCAGTAGAGTCCATCCAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | GTCGGGACTTGTTATCATGGCACCAGGCAAGGCAGGTaGCTGTCTCACGCCTCTCCAAGGACTCCTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: VGTCYHGTRQGR*LSHASPRTPPL Trigger: AAGTGGAGGAGTCCTTGGAGAGGCGTGAGACAGCCACCTGCCTTGCCTGGTGCCATGATAACAAGTCCCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | CAGCTCTTCATCTTCCGGAGTCGGGACTTGTTATCATaGCACCAGGCAAGGCAGGTGGCTGTCTCACGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLFIFRSRDLLS*HQARQVAVSRL Trigger: GAGGCGTGAGACAGCCACCTGCCTTGCCTGGTGCCATGATAACAAGTCCCGACTCCGGAAGATGAAGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | CAGGAGGTCCTTGTATGGGGAGATATGTGTGTCTGGTaGGAAGGCCAACATGCCCATGACCTGGCGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: QEVLVWGDMCVW*EGQHAHDLADL Trigger: GAGGTCCGCCAGGTCATGGGCATGTTGGCCTTCCCACCAGACACACATATCTCCCCATACAAGGACCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | GTCCAGGAGGTCCTTGTATGGGGAGATATGTGTGTCTaGTGGGAAGGCCAACATGCCCATGACCTGGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: VQEVLVWGDMCV*WEGQHAHDLAD Trigger: GTCCGCCAGGTCATGGGCATGTTGGCCTTCCCACCAGACACACATATCTCCCCATACAAGGACCTCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | CATTCGCCACCGGGCTGGGTCCAGGAGGTCCTTGTATaGGGAGATATGTGTGTCTGGTGGGAAGGCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: HSPPGWVQEVLV*GDMCVWWEGQH Trigger: ATGTTGGCCTTCCCACCAGACACACATATCTCCCCATACAAGGACCTCCTGGACCCAGCCCGGTGGCGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 72 bp | TCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACGTTaGCAGAGCTTGGCGCTCTCATCCTCGGCCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: SLLCSLRCSILR*QSLALSSSAWM Trigger: CATCCAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 72 bp | TCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACGTTaGCAGAGCTTGGCGCTCTCATCCTCGGCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLCSLRCSILR*QSLALSSSAFL Trigger: GAGGAAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200716.3 |
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| CDS CAA 90 bp | TCACTGCTGTGCTCCTTGAGGTGCTCGATCCTACGTTTGCAGAGCTaGGCGCTCTCATCCTCGGCCTTCCTCTTGAGGACACTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLCSLRCSILRLQS*ALSSSAFLLRTLSF Trigger: GAAGCTGAGTGTCCTCAAGAGGAAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCACAGCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200716.3 |
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| CDS GCA 72 bp | CAGCTGGCTCCCTTCAGCCTGACTGAAGTGCTTTCTTaGATGTCTCACAGCATCCAGGCGCTTGTTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: QLAPFSLTEVLS*MSHSIQALVLP Trigger: CGGCAGAACAAGCGCCTGGATGCTGTGAGACATGCAAGAAAGCACTTCAGTCAGGCTGAAGGGAGCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | CTACGTTTGCAGAGCTTGGCGCTCTCATCCTCGGCCTaGATGGACTCTACTGCCTTCCTCTTGAGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: LRLQSLALSSSA*MDSTAFLLRTL Trigger: GAGTGTCCTCAAGAGGAAGGCAGTAGAGTCCATCCAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 72 bp | TGCTCCTTGAGGTGCTCGATCCTACGTTTGCAGAGCTaGGCGCTCTCATCCTCGGCCTGGATGGACTCTACT | + |
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Preference number: 6 (lower is better) Translates to: CSLRCSILRLQS*ALSSSAWMDST Trigger: AGTAGAGTCCATCCAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 72 bp | TGCTCCTTGAGGTGCTCGATCCTACGTTTGCAGAGCTaGGCGCTCTCATCCTCGGCCTTCCTCTTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: CSLRCSILRLQS*ALSSSAFLLRT Trigger: TGTCCTCAAGAGGAAGGCCGAGGATGAGAGCGCCAAGCTCTGCAAACGTAGGATCGAGCACCTCAAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200716.3 |
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| CDS CAA 90 bp | AGGCAGGTGGCTGTCTCACGCCTCTCCAAGGACTCCTCCACTTCTTaGGCTGTCAGGAACATCTCGATATTCACAAGGTCCTCGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: RQVAVSRLSKDSSTS*AVRNISIFTRSSMP Trigger: TGGCATCGAGGACCTTGTGAATATCGAGATGTTCCTGACAGCCAAAGAAGTGGAGGAGTCCTTGGAGAGGCGTGAGACAGCCACCTGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS TCA 72 bp | CATGAACAACACAGTGCAGTGGATGAAGTACTGGCTTaGGGGTCGGGTACTCCTGCACCTTCAGGGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: HEQHSAVDEVLA*GSGTPAPSGSW Trigger: CCATGACCCTGAAGGTGCAGGAGTACCCGACCCTCAAGCCAGTACTTCATCCACTGCACTGTGTTGTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS GCA 72 bp | GTGGGTTATTCTCATTCATCACGTCACCAGAGATCTTaGAGACCAGGCGGGAGTTGGCACAGTGAGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: VGYSHSSRHQRS*RPGGSWHSEPW Trigger: CCATGGCTCACTGTGCCAACTCCCGCCTGGTCTGCAAGATCTCTGGTGACGTGATGAATGAGAATAACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | ATATCGAAACTGCTGGATCAGCATTCGCCACCGGGCTaGGTCCAGGAGGTCCTTGTATGGGGAGATATGTGT | + |
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Preference number: 6 (lower is better) Translates to: ISKLLDQHSPPG*VQEVLVWGDMC Trigger: ACACATATCTCCCCATACAAGGACCTCCTGGACCCAGCCCGGTGGCGAATGCTGATCCAGCAGTTTCGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS GCA 72 bp | CTGTCAGGAACATCTCGATATTCACAAGGTCCTCGATaGCACTCTGGCGAGCCAGCTTCACAGCTGTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LSGTSRYSQGPR*HSGEPASQLCC Trigger: ACAACACAGCTGTGAAGCTGGCTCGCCAGAGTGGCATCGAGGACCTTGTGAATATCGAGATGTTCCTGACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | GTTTCCATGAACAACACAGTGCAGTGGATGAAGTACTaGCTTGAGGGTCGGGTACTCCTGCACCTTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VSMNNTVQWMKY*LEGRVLLHLQG Trigger: ACCCTGAAGGTGCAGGAGTACCCGACCCTCAAGCCAGTACTTCATCCACTGCACTGTGTTGTTCATGGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS CCA 72 bp | CCCTTCAGCAGAGTTTCCATGAACAACACAGTGCAGTaGATGAAGTACTGGCTTGAGGGTCGGGTACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PFSRVSMNNTVQ*MKYWLEGRVLL Trigger: CAGGAGTACCCGACCCTCAAGCCAGTACTTCATCCACTGCACTGTGTTGTTCATGGAAACTCTGCTGAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200882.3 |
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| CDS CAA 72 bp | GCTGTCTCACGCCTCTCCAAGGACTCCTCCACTTCTTaGGCTGTCAGGAACATCTCGATATTCACAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AVSRLSKDSSTS*AVRNISIFTRS Trigger: GGACCTTGTGAATATCGAGATGTTCCTGACAGCCAAAGAAGTGGAGGAGTCCTTGGAGAGGCGTGAGACAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | CTGTCTCACGCCTCTCCAAGGACTCCTCCACTTCTTTaGCTGTCAGGAACATCTCGATATTCACAAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSHASPRTPPLL*LSGTSRYSQGP Trigger: AGGACCTTGTGAATATCGAGATGTTCCTGACAGCCAAAGAAGTGGAGGAGTCCTTGGAGAGGCGTGAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | GTAGCCATAGACATAGCCATTAGGCAGCATCATGGGTaGGTTATTCTCATTCATCACGTCACCAGAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: VAIDIAIRQHHG*VILIHHVTRDL Trigger: AAGATCTCTGGTGACGTGATGAATGAGAATAACCCACCCATGATGCTGCCTAATGGCTATGTCTATGGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CCA 72 bp | CTCAGCTTGGGAGAAGTGGAAGACTTCTTTGGTTCTTaGGCAAACAACTTTATCATCTTGACGAATAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSLGEVEDFFGS*ANNFIILTNRK Trigger: CTTTCTATTCGTCAAGATGATAAAGTTGTTTGCCCAAGAACCAAAGAAGTCTTCCACTTCTCCCAAGCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 90 bp | GAAGTGGAAGACTTCTTTGGTTCTTGGGCAAACAACTTTATCATCTaGACGAATAGAAAGCAGAGAATTGTAGCCATAGACATAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: EVEDFFGSWANNFII*TNRKQRIVAIDIAI Trigger: AATGGCTATGTCTATGGCTACAATTCTCTGCTTTCTATTCGTCAAGATGATAAAGTTGTTTGCCCAAGAACCAAAGAAGTCTTCCACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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| CDS CAA 72 bp | GACTTCTTTGGTTCTTGGGCAAACAACTTTATCATCTaGACGAATAGAAAGCAGAGAATTGTAGCCATAGAC | + |
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Preference number: 6 (lower is better) Translates to: DFFGSWANNFII*TNRKQRIVAID Trigger: GTCTATGGCTACAATTCTCTGCTTTCTATTCGTCAAGATGATAAAGTTGTTTGCCCAAGAACCAAAGAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114449.7 |
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