Pregenerated sensors for MAD2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029003Ensembl transcript IDs: ENSMUST00000030860.9, ENSMUST00000084129.9, ENSMUST00000105707.2, ENSMUST00000132698.8, ENSMUST00000140049.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCCCAGGACTGGGCAGCCTaGCCAGAGGGGCAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: PEGQPHVKAIRALGVWGPQDWAA*PEGQPH Trigger: ATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTG...GGGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAACAGGACTGGGCAGCCTaGCCAGAGGGGCAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: VVSPWGHFINNNAWHSGQQDWAA*PEGQPH Trigger: ATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTG...TTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAAAGCCCAGGAGGCTGCTaGGAAATGGCGTGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VVSPWGHFINNNAWHSGQSPGGC*EMACVL Trigger: GAGGACACACGCCATTTCTCAGCAGCCTCCTGGGCT...TTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTTAGCCAGCTGAGCCAGCTGGGTAGCTGGTaGCAGGCATGCCCTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ATLLTITHGTVDNVSQLSQLGSW*QACPQL Trigger: CAGCTGAGGGCATGCCTGTCACCAGCTACCCAGCTG...GCTCAGCTGGCTAACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105707.2 |
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| 3UTR-3UTR GCA 90 bp | GCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTTAGCCAGCTGAGCAGCTCCTGGGAAGGCTaGCTCACGAAGGCAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ATLLTITHGTVDNVSQLSSSWEG*LTKASR Trigger: CCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCT...GCTCAGCTGGCTAACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| 3UTR TCA 72 bp | GGCTGGGGCCCCGTAGTGGGACAGCTGGGTAGCTGGTaGCAGGCATGCCCTCAGCTGTTCTTATGCGCTCGC | + |
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Preference number: 3 (lower is better) Translates to: GWGPVVGQLGSW*QACPQLFLCAR Trigger: GCGAGCGCATAAGAACAGCTGAGGGCATGCCTGTCACCAGCTACCCAGCTGTCCCACTACGGGGCCCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105707.2 |
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| 3UTR TCA 72 bp | AGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTaGCCAGAGGGGCAGCCACATGTCAAGGCAATAAGA | + |
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Preference number: 3 (lower is better) Translates to: RLPHEGKQDWAA*PEGQPHVKAIR Trigger: TCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGCAGCCTGGAGGGTTGTaGTCCAGGACAGCATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PGKAASRRQAGLGSLTRGQPGGL*SRTASH Trigger: GTGTGATGCTGTCCTGGATCACAACCCTCCAGGCTG...CCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGTCTCCAGGAGAGGTTTaGCGCAGTGGAGTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGKAASRRQAGLGSLTRGSPGEV*RSGVCP Trigger: AGGACACACTCCACTGCGTCAAACCTCTCCTGGAGA...CCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | GCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACAAGCAGCTGCTCCACATaGGACAGGAGGGAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AASRRQAGLGSLTRGAATSSCST*DRRESE Trigger: TTCAGACTCCCTCCTGTCTCATGTGGAGCAGCTGCT...TGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGATCTCCAGGAGAGGTTTaGCGCAGTGGAGTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: APGKAASRRQAGLGSLTRSPGEV*RSGVCP Trigger: AGGACACACTCCACTGCGTCAAACCTCTCCTGGAGA...TCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGCAGTGGAGTGTGTCCTaGATGTACTGGTTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPAPGKAASRRQAGLGSLQWSVS*MYWFSS Trigger: GGAGCTGAACCAGTACATCCAGGACACACTCCACTG...CAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACACAGTGGAGTGTGTCCTaGATGTACTGGTTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AASRRQAGLGSLTRGAATQWSVS*MYWFSS Trigger: GGAGCTGAACCAGTACATCCAGGACACACTCCACTG...TGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | CTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGCAGCTGCTCCACATaGGACAGGAGGGAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LTKASRTGQPDQRGSHMSSSCST*DRRESE Trigger: TTCAGACTCCCTCCTGTCTCATGTGGAGCAGCTGCT...TGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGTGCGCTTCTGGAAGATaGCCACCGGGTAGACCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LGSLTRGAATCQGNKSTWCASGR*PPGRPR Trigger: GCGAGGTCTACCCGGTGGGCATCTTCCAGAAGCGCA...CCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGTGTAAATGTGCAGCCTaGAGGGTTGTGATCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPAPGKAASRRQAGLGSLCKCAA*RVVIQD Trigger: GTCCTGGATCACAACCCTCCAGGCTGCACATTTACA...CAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | TCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGGCAAGGGAGGCTGAGTaGTCTCAAAGACAAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPAPGKAASRRQAGLGSLAREAE*SQRQTS Trigger: AGAAGTTTGTCTTTGAGATCACTCAGCCTCCCTTGC...CAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | ACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCCAGCCTGGAGGGTTGTaGTCCAGGACAGCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: TRGAATCQGNKSTWSLGPQPGGL*SRTASH Trigger: GTGTGATGCTGTCCTGGATCACAACCCTCCAGGCTG...GGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | CGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCGCACGTTGTACTTCTTaGGCTTCTGGAAGATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRQAGLGSLTRGAATCQGARCTS*ASGRCP Trigger: TGGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGC...GCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | CTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAACGTCAGCCACCACTTaGCCAAAGTTGAGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTKASRTGQPDQRGSHMSTSATT*PKLRSW Trigger: CCAAGACCTCAACTTTGGCCAAGTGGTGGCTGACGT...TGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGAGAGGTTTGACGCAGTaGAGTGTGTCCTGGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: SWEGCLTKASRTGQPDQRRGLTQ*SVSWMY Trigger: GTACATCCAGGACACACTCCACTGCGTCAAACCTCT...CCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | CTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGGGAGGGAGTCTGAATTaGTGGACAGCAAGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGSLTRGAATCQGNKSTWGGSLN*WTAREA Trigger: AGCCTCCCTTGCTGTCCATCAATTCAGACTCCCTCC...CCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | TGGGTAGCTGGTGACAGGCATGCCCTCAGCTGTTCTTATGCGCTCGCTCTTCAATGCGCTTCTGGAAGATaGCCACCGGGTAGACCTCGC | + |
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Preference number: 4 (lower is better) Translates to: WVAGDRHALSCSYALALQCASGR*PPGRPR Trigger: GCGAGGTCTACCCGGTGGGCATCTTCCAGAAGCGCA...TTGAAGAGCGAGCGCATAAGAACAGCTGAGGGCATGCCTGTCACCAGCTACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | CTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAGCACGTTGTACTTCTTaGGCTTCTGGAAGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LTKASRTGQPDQRGSHMSARCTS*ASGRCP Trigger: TGGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGC...TGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCCATCAAGCGGGGGTCGTaGATGTGGACATCCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PEGQPHVKAIRALGVWGPIKRGS*MWTSCS Trigger: TGAACAGGATGTCCACATGCACGACCCCCGCTTGAT...GGGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR TCA 90 bp | GGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTTCTCCAGGAGAGGTTTaGCGCAGTGGAGTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSLTRGAATCQGNKSTWSSPGEV*RSGVCP Trigger: AGGACACACTCCACTGCGTCAAACCTCTCCTGGAGA...ACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGACGTCAGCCACCACTTaGCCAAAGTTGAGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LGSLTRGAATCQGNKSTWTSATT*PKLRSW Trigger: CCAAGACCTCAACTTTGGCCAAGTGGTGGCTGACGT...CCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGAAATGTCCGACGTCATaGTTTTTAGGGGTATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PGKAASRRQAGLGSLTRGKCPTS*FLGVSS Trigger: GCTTGATACCCCTAAAAACCATGACGTCGGACATTT...CCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR TCA 90 bp | AGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGAGGGAGTCTGAATTaGTGGACAGCAAGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLTRGAATCQGNKSTWSLGGSLN*WTAREA Trigger: AGCCTCCCTTGCTGTCCATCAATTCAGACTCCCTCC...CAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | AGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGAGCAGCTGCTCCACATaGGACAGGAGGGAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLTRGAATCQGNKSTWSLSSCST*DRRESE Trigger: TTCAGACTCCCTCCTGTCTCATGTGGAGCAGCTGCT...CAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGAGGTTTGACGCAGTaGAGTGTGTCCTGGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: LGSLTRGAATCQGNKSTWRGLTQ*SVSWMY Trigger: GTACATCCAGGACACACTCCACTGCGTCAAACCTCT...CCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | ACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCTGTAAATGTGCAGCCTaGAGGGTTGTGATCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TRGAATCQGNKSTWSLGPCKCAA*RVVIQD Trigger: GTCCTGGATCACAACCCTCCAGGCTGCACATTTACA...GGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | AGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGATCAAGCGGGGGTCGTaGATGTGGACATCCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLTRGAATCQGNKSTWSLIKRGS*MWTSCS Trigger: TGAACAGGATGTCCACATGCACGACCCCCGCTTGAT...CAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR CCA 90 bp | AGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGACGTCAGCCACCACTTaGCCAAAGTTGAGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLTRGAATCQGNKSTWSLTSATT*PKLRSW Trigger: CCAAGACCTCAACTTTGGCCAAGTGGTGGCTGACGT...CAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | GTAGTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAACAGCCTGGAGGGTTGTaGTCCAGGACAGCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: VVSPWGHFINNNAWHSGQQPGGL*SRTASH Trigger: GTGTGATGCTGTCCTGGATCACAACCCTCCAGGCTG...TTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTTTGCGCTTCTGGAAGATaGCCACCGGGTAGACCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SALGATLLTITHGTVDNVCASGR*PPGRPR Trigger: GCGAGGTCTACCCGGTGGGCATCTTCCAGAAGCGCA...AACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | GTAGTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAAGGAGGGAGTCTGAATTaGTGGACAGCAAGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VVSPWGHFINNNAWHSGQGGSLN*WTAREA Trigger: AGCCTCCCTTGCTGTCCATCAATTCAGACTCCCTCC...TTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTAGAGGTTTGACGCAGTaGAGTGTGTCCTGGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: VSPWGHFINNNAWHSGQCRGLTQ*SVSWMY Trigger: GTACATCCAGGACACACTCCACTGCGTCAAACCTCT...ACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTATCTGCCAGGATCCATaGGAAGTCCTTGATGACCTG | + |
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Preference number: 4 (lower is better) Translates to: VSPWGHFINNNAWHSGQCICQDP*EVLDDL Trigger: CAGGTCATCAAGGACTTCCCATGGATCCTGGCAGAT...ACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR CCA 90 bp | GTAGTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAAATCTGCCAGGATCCATaGGAAGTCCTTGATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVSPWGHFINNNAWHSGQICQDP*EVLDDL Trigger: CAGGTCATCAAGGACTTCCCATGGATCCTGGCAGAT...TTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR CCA 90 bp | GCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTTAGCCAGCTGAGCTGTAAATGTGCAGCCTaGAGGGTTGTGATCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ATLLTITHGTVDNVSQLSCKCAA*RVVIQD Trigger: GTCCTGGATCACAACCCTCCAGGCTGCACATTTACA...GCTCAGCTGGCTAACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR TCA 90 bp | GCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTTAGCCAGCTGAGCGCAAGGGAGGCTGAGTaGTCTCAAAGACAAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: ATLLTITHGTVDNVSQLSAREAE*SQRQTS Trigger: AGAAGTTTGTCTTTGAGATCACTCAGCCTCCCTTGC...GCTCAGCTGGCTAACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCTTGGGGCCACTTTATTAACAATAACGCATGGCACAGTGGACAATGTAAATGTCCGACGTCATaGTTTTTAGGGGTATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VSPWGHFINNNAWHSGQCKCPTS*FLGVSS Trigger: GCTTGATACCCCTAAAAACCATGACGTCGGACATTT...ACATTGTCCACTGTGCCATGCGTTATTGTTAATAAAGTGGCCCCAAGGGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR CAA 90 bp | TCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGGCCAAAGTTGAGGTCTaGGCGCGTGAGGGTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SPAPGKAASRRQAGLGSLAKVEV*AREGGH Trigger: ATGACCACCCTCACGCGCCAAGACCTCAACTTTGGC...CAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGACCACTTGGCCAAAGTaGAGGTCTTGGCGCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SWEGCLTKASRTGQPDQRTTWPK*RSWRVR Trigger: CCTCACGCGCCAAGACCTCAACTTTGGCCAAGTGGT...CCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGCACGTCAGCCACCACTaGGCCAAAGTTGAGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGKAASRRQAGLGSLTRGHVSHH*AKVEVL Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCTGACGTG...CCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | TCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGGGCACGTTGTACTTCTaGCGCTTCTGGAAGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: SPAPGKAASRRQAGLGSLGTLYF*RFWKMP Trigger: GGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGCC...CAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGGCACGTTGTACTTCTaGCGCTTCTGGAAGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: PGKAASRRQAGLGSLTRGGTLYF*RFWKMP Trigger: GGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGCC...CCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | GCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATTCTCCAGGAGAGGTTaGACGCAGTGGAGTGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: AASRRQAGLGSLTRGAATFSRRG*TQWSVS Trigger: GGACACACTCCACTGCGTCAAACCTCTCCTGGAGAA...TGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | TCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGAGGAGGGAGTCTGAATaGATGGACAGCAAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SPAPGKAASRRQAGLGSLRRESE*MDSKGG Trigger: GCCTCCCTTGCTGTCCATCAATTCAGACTCCCTCCT...CAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | CTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAGCCAAAGTTGAGGTCTaGGCGCGTGAGGGTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LTKASRTGQPDQRGSHMSAKVEV*AREGGH Trigger: ATGACCACCCTCACGCGCCAAGACCTCAACTTTGGC...TGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCCGGGCTGGGACCACTTGGCCAAAGTaGAGGTCTTGGCGCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AATCQGNKSTWSLGPRAGTTWPK*RSWRVR Trigger: CCTCACGCGCCAAGACCTCAACTTTGGCCAAGTGGT...CCCAGCCCGGGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | GCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGATTCTCCAGGAGAGGTTaGACGCAGTGGAGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: APGKAASRRQAGLGSLTRFSRRG*TQWSVS Trigger: GGACACACTCCACTGCGTCAAACCTCTCCTGGAGAA...TCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGTTCTCCAGGAGAGGTTaGACGCAGTGGAGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPSSWEGCLTKASRTGQFSRRG*TQWSVS Trigger: GGACACACTCCACTGCGTCAAACCTCTCCTGGAGAA...CTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCCGGGCTGGGCACGTCAGCCACCACTaGGCCAAAGTTGAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AATCQGNKSTWSLGPRAGHVSHH*AKVEVL Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCTGACGTG...CCCAGCCCGGGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCCGGGCTGGGAGGAGGGAGTCTGAATaGATGGACAGCAAGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AATCQGNKSTWSLGPRAGRRESE*MDSKGG Trigger: GCCTCCCTTGCTGTCCATCAATTCAGACTCCCTCCT...CCCAGCCCGGGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | ACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCACCACTTGGCCAAAGTaGAGGTCTTGGCGCGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRGAATCQGNKSTWSLGPTTWPK*RSWRVR Trigger: CCTCACGCGCCAAGACCTCAACTTTGGCCAAGTGGT...GGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGCACGTCAGCCACCACTaGGCCAAAGTTGAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSLTRGAATCQGNKSTWHVSHH*AKVEVL Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCTGACGTG...CCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | ACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGGCCCAGGAGGGAGTCTGAATaGATGGACAGCAAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TRGAATCQGNKSTWSLGPRRESE*MDSKGG Trigger: GCCTCCCTTGCTGTCCATCAATTCAGACTCCCTCCT...GGGCCCCAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCCCCAGCTCCTGGGAAGGCTGCCTCACGAAGGCAAGCAGGACTGGGCAGATCCATGGGAAGTCCTaGATGACCTGTATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SFPSSWEGCLTKASRTGQIHGKS*MTCIFS Trigger: GGAGAAGATACAGGTCATCAAGGACTTCCCATGGAT...CTGCCCAGTCCTGCTTGCCTTCGTGAGGCAGCCTTCCCAGGAGCTGGGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS GCA 90 bp | AGGACATCTGAACCGGCACGTTGTACTTCTTGCGCTTCTGGAAGATaGCCACCGGGTAGACCTCGCGCACATAGAGAATCAGGTGCACGG | + |
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Preference number: 5 (lower is better) Translates to: RTSEPARCTSCASGR*PPGRPRAHRESGAR Trigger: CCGTGCACCTGATTCTCTATGTGCGCGAGGTCTACCCGGTGGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGCCGGTTCAGATGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 |
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| CDS-3UTR CAA 90 bp | ACGAAGGCAAGCAGGACTGGGCAGCCTGACCAGAGGGGCAGCCACATGTCAAGGATCCATGGGAAGTCCTaGATGACCTGTATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TKASRTGQPDQRGSHMSRIHGKS*MTCIFS Trigger: GGAGAAGATACAGGTCATCAAGGACTTCCCATGGAT...CCTTGACATGTGGCTGCCCCTCTGGTCAGGCTGCCCAGTCCTGCTTGCCTTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 |
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| CDS-3UTR CAA 90 bp | AGCCTGACCAGAGGGGCAGCCACATGTCAAGGCAATAAGAGCACTTGGAGTCTGGGCACGTTGTACTTCTaGCGCTTCTGGAAGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: SLTRGAATCQGNKSTWSLGTLYF*RFWKMP Trigger: GGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGCC...CAGACTCCAAGTGCTCTTATTGCCTTGACATGTGGCTGCCCCTCTGGTCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 |
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| CDS CCA 90 bp | GGACAGCAAGGGAGGCTGAGTGATCTCAAAGACAAACTTCTCCACTaGGCGGTGTTCCTTATCCAAAATCACCACCACCACCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GQQGRLSDLKDKLLH*AVFLIQNHHHHLLH Trigger: GTGGAGAAGGTGGTGGTGGTGATTTTGGATAAGGAACACCGCCCAGTGGAGAAGTTTGTCTTTGAGATCACTCAGCCTCCCTTGCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 |
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| CDS TCA 90 bp | TCTCTTGTGTGCACGAGGACTGTAAATGTGCAGCCTGGAGGGTTGTaGTCCAGGACAGCATCACACACACTAATCTTAAGGATGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SLVCTRTVNVQPGGL*SRTASHTLILRMKA Trigger: AGCCTTCATCCTTAAGATTAGTGTGTGTGATGCTGTCCTGGATCACAACCCTCCAGGCTGCACATTTACAGTCCTCGTGCACACAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 ENSMUST00000140049.8 |
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| CDS GCA 72 bp | GGTGACAGGACATCTGAACCGGCACGTTGTACTTCTTaGGCTTCTGGAAGATGCCCACCGGGTAGACCTCGC | + |
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Preference number: 6 (lower is better) Translates to: GDRTSEPARCTS*ASGRCPPGRPR Trigger: GCGAGGTCTACCCGGTGGGCATCTTCCAGAAGCGCAAGAAGTACAACGTGCCGGTTCAGATGTCCTGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 |
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| CDS CCA 72 bp | TCCACATCGTTCTTCTCCAGGAGAGGTTTGACGCAGTaGAGTGTGTCCTGGATGTACTGGTTCAGCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: STSFFSRRGLTQ*SVSWMYWFSSG Trigger: CCCGGAGCTGAACCAGTACATCCAGGACACACTCCACTGCGTCAAACCTCTCCTGGAGAAGAACGATGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 |
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| CDS CCA 72 bp | GGGAGGCTGAGTGATCTCAAAGACAAACTTCTCCACTaGGCGGTGTTCCTTATCCAAAATCACCACCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRLSDLKDKLLH*AVFLIQNHHHH Trigger: GTGGTGGTGGTGATTTTGGATAAGGAACACCGCCCAGTGGAGAAGTTTGTCTTTGAGATCACTCAGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 |
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| CDS TCA 72 bp | ATCTTAAGGATGAAGGCTCGAAGCAGCTGCTCCACATaGGACAGGAGGGAGTCTGAATTGATGGACAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ILRMKARSSCST*DRRESELMDSK Trigger: CTTGCTGTCCATCAATTCAGACTCCCTCCTGTCTCATGTGGAGCAGCTGCTTCGAGCCTTCATCCTTAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 ENSMUST00000140049.8 |
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| CDS TCA 72 bp | TGCACGAGGACTGTAAATGTGCAGCCTGGAGGGTTGTaGTCCAGGACAGCATCACACACACTAATCTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: CTRTVNVQPGGL*SRTASHTLILR Trigger: CCTTAAGATTAGTGTGTGTGATGCTGTCCTGGATCACAACCCTCCAGGCTGCACATTTACAGTCCTCGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030860.9 ENSMUST00000084129.9 ENSMUST00000105707.2 ENSMUST00000132698.8 ENSMUST00000140049.8 |
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