Pregenerated sensors for MAD2L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029910Ensembl transcript IDs: ENSMUST00000101343.2, ENSMUST00000116605.8
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCCTCCCCAGTCCCTGAGGCCTCAAGTCTCTCAAGGGTTAGGTaGATCTTCTCTCAGAAGCCAGACCAGGCAGTCCTCTGCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: QASPVPEASSLSRVR*IFSQKPDQAVLCCS Trigger: GCTACAGCAGAGGACTGCCTGGTCTGGCTTCTGAGAGAAGATGCACCTAACCCTTGAGAGACTTGAGGCCTCAGGGACTGGGGAGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | CACAGGGTTGCCCTGCTTTTGTCCAGCAGTTGGGTGCAAATTATCTaGTTCTGTCTTGGTCATCTGCTTGTTGGGCCTCTTGGAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HRVALLLSSSWVQII*FCLGHLLVGPLGGQ Trigger: CTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | AGCAGTCCCACAATTGCTCTCTCACTGGAGAGGCTGAAAACTCAGTaGATTGGGGATGGATGCTTCAGCAGGCCCAATCCAGCATTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSPTIALSLERLKTQ*IGDGCFSRPNPALK Trigger: TTTCAATGCTGGATTGGGCCTGCTGAAGCATCCATCCCCAATGCACTGAGTTTTCAGCCTCTCCAGTGAGAGAGCAATTGTGGGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 90 bp | CTCAATCACACTTGGGAGGCTAAGAACTTGGCAGTCATTTGGTCCTaGAGACTGGGTACTCAGCAGTGTGAGCAGTCCCACAATTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LNHTWEAKNLAVIWS*RLGTQQCEQSHNCS Trigger: AGAGCAATTGTGGGACTGCTCACACTGCTGAGTACCCAGTCTCCAGGACCAAATGACTGCCAAGTTCTTAGCCTCCCAAGTGTGATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | CCTAATTCAACCACAGGGTTGCCCTGCTTTTGTCCAGCAGTTGGGTaGAAATTATCTGCTTCTGTCTTGGTCATCTGCTTGTTGGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: PNSTTGLPCFCPAVG*KLSASVLVICLLGL Trigger: GAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | CTCAACTTCATCCAGCCTTCCCCTAATTCAACCACAGGGTTGCCCTaGTTTTGTCCAGCAGTTGGGTGCAAATTATCTGCTTCTGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: LNFIQPSPNSTTGLP*FCPAVGCKLSASVL Trigger: CAAGACAGAAGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAGGCTGGATGAAGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 90 bp | GCAGGTGTGGTCCAGACTAAAGATGTGTACCACCATGCTGGGATCTaGGATTTGCTTTGTCCCAGGCTGACATTGAACTCAAGAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: AGVVQTKDVYHHAGI*DLLCPRLTLNSRDL Trigger: AAGATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGCAAATCCCAGATCCCAGCATGGTGGTACACATCTTTAGTCTGGACCACACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | CCCGGCTATGCTGGCCTGGCCTACTATTATAACAAGGACTGCAACTaGCAATATCCAGATTACAACAAGATCTCTGAGCACAGCAATCAG | + |
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Preference number: 1 (lower is better) Translates to: PGYAGLAYYYNKDCN*QYPDYNKISEHSNQ Trigger: CTGATTGCTGTGCTCAGAGATCTTGTTGTAATCTGGATATTGGCAGTTGCAGTCCTTGTTATAATAGTAGGCCAGGCCAGCATAGCCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | GTTTGGGGATGGTCTTGTGGACTGTGTGCTATGCTGAGATCTGGTTaGAGTCTGGAAGTTGGCATTGTCATGGTATTTGAAGCATCACCT | + |
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Preference number: 1 (lower is better) Translates to: VWGWSCGLCAMLRSG*SLEVGIVMVFEASP Trigger: AGGTGATGCTTCAAATACCATGACAATGCCAACTTCCAGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | CTGGGATTTGCTTTGTCCCAGGCTGACATTGAACTCAAGAGATCTTaGCTCAATCTCCTGGGATTAAAGGTGTGTAATACCTTGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LGFALSQADIELKRS*LNLLGLKVCNTLPG Trigger: CCCAGGCAAGGTATTACACACCTTTAATCCCAGGAGATTGAGGCAAGATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGCAAATCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 90 bp | GTTGTGATGAAAAAGGTGGTACGTAGTTGTTTGGGGATGGTCTTGTaGACTGTGTGCTATGCTGAGATCTGGTTGCAGTCTGGAAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: VVMKKVVRSCLGMVL*TVCYAEIWLQSGSW Trigger: CCAACTTCCAGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCCCAAACAACTACGTACCACCTTTTTCATCACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | GCATTTCGTGGGTTCTTCCTGAACTTACCACAGAATCAGCAAGAGTaGTACACGTTATTAAGGGAGCCAACAGATTCACTGTGGGATGGA | + |
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Preference number: 1 (lower is better) Translates to: AFRGFFLNLPQNQQE*YTLLREPTDSLWDG Trigger: TCCATCCCACAGTGAATCTGTTGGCTCCCTTAATAACGTGTAGCACTCTTGCTGATTCTGTGGTAAGTTCAGGAAGAACCCACGAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | AAAAAGGTGGTACGTAGTTGTTTGGGGATGGTCTTGTGGACTGTGTaGTATGCTGAGATCTGGTTGCAGTCTGGAAGTTGGCATTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: KKVVRSCLGMVLWTV*YAEIWLQSGSWHCH Trigger: ATGACAATGCCAACTTCCAGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCCCAAACAACTACGTACCACCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 90 bp | GTGCAGGTGCTGGGATGGTCTACTTCTCATCTCTATAGAAATCTATaGCTAAGTATTTCTACTAAGCACTGTCTAGCCTCTGCTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VQVLGWSTSHLYRNL*LSISTKHCLASAAG Trigger: TCCAGCAGCAGAGGCTAGACAGTGCTTAGTAGAAATACTTAGTCATAGATTTCTATAGAGATGAGAAGTAGACCATCCCAGCACCTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 90 bp | GTTTCAGAAAGGAGCACCAGGAACAGCTCCAGTAGTTTTCCAAGATaGAGTATTTGGGAATGGATGGTGGAGACAAGAGCACAGCATTAT | + |
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Preference number: 1 (lower is better) Translates to: VSERSTRNSSSSFPR*SIWEWMVETRAQHY Trigger: ATAATGCTGTGCTCTTGTCTCCACCATCCATTCCCAAATACTTCATCTTGGAAAACTACTGGAGCTGTTCCTGGTGCTCCTTTCTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | AATGCAAGCAGTTTCATTTCTGTACCTTTCCCAATTCCAGATTATTaGAGGCTCTCTCGCTCCTATGACCTATTCTCACTTTCAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: NASSFISVPFPIPDY*RLSRSYDLFSLSER Trigger: CCTCTCTGAAAGTGAGAATAGGTCATAGGAGCGAGAGAGCCTGCAATAATCTGGAATTGGGAAAGGTACAGAAATGAAACTGCTTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 90 bp | CAGCACTCTTGTCGACTCAGACAAGTCCAGGAAGAACCCAAGAAATaGAACAATAACACACATTTATCAATGTCGGATCTTAGCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: QHSCRLRQVQEEPKK*NNNTHLSMSDLSFL Trigger: AAGAAAGCTAAGATCCGACATTGATAAATGTGTGTTATTGTTCCATTTCTTGGGTTCTTCCTGGACTTGTCTGAGTCGACAAGAGTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101343.2 |
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| 3UTR TCA 90 bp | ATGCCCTGGAGTCCTGTCCAAAACCTAATGTCAGCATCAATACTATaGAGTGCTTCCACTATGTGTTCTGCTAACACAGAATTTTATGTT | + |
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Preference number: 1 (lower is better) Translates to: MPWSPVQNLMSASIL*SASTMCSANTEFYV Trigger: AACATAAAATTCTGTGTTAGCAGAACACATAGTGGAAGCACTTCATAGTATTGATGCTGACATTAGGTTTTGGACAGGACTCCAGGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 90 bp | CTTCCCACGGATTCGGTACTGATCACAAATCTTTTGGTGATTAGATaGAATTATCTTTGTCCCAAGACAATCCTCAAAGAAAGCACACAT | + |
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Preference number: 1 (lower is better) Translates to: LPTDSVLITNLLVIR*NYLCPKTILKESTH Trigger: ATGTGTGCTTTCTTTGAGGATTGTCTTGGGACAAAGATAATTCCATCTAATCACCAAAAGATTTGTGATCAGTACCGAATCCGTGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | GTATTTCAATATGGGGTCTATATAAAGAGAAATGTGTCTTACTGCTaGATTTCGTGGGTTCTTCCTGAACTTACCACAGAATCAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: VFQYGVYIKRNVSYC*ISWVLPELTTESAR Trigger: TCTTGCTGATTCTGTGGTAAGTTCAGGAAGAACCCACGAAATGCAGCAGTAAGACACATTTCTCTTTATATAGACCCCATATTGAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| 3UTR GCA 90 bp | CATGTATTTCAATATGGGGTCTATATAAAGAGAAATGTGTCTTACTaGTGCATTTCGTGGGTTCTTCCTGAACTTACCACAGAATCAGCA | + |
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Preference number: 1 (lower is better) Translates to: HVFQYGVYIKRNVSY*CISWVLPELTTESA Trigger: TGCTGATTCTGTGGTAAGTTCAGGAAGAACCCACGAAATGCAGCAGTAAGACACATTTCTCTTTATATAGACCCCATATTGAAATACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAAACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTCAAAAGGGATAGGCCTCCCCAGTCCCTaGGGCCTCAAGTCTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: CKPGWPRTQKSACLSKGIGLPSP*GLKSLK Trigger: CTTGAGAGACTTGAGGCCTCAGGGACTGGGGAGGCC...TATCCCTTTTGAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACCACCATGCTGGGATCTaGGATTTGCTTTGTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDHHAGI*DLLCPR Trigger: CCTGGGACAAAGCAAATCCCAGATCCCAGCATGGTG...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACACATGGGGCTCAGGCTaGCCTTTAACTCCCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDTWGSG*PLTPRD Trigger: ATCTCTGGGAGTTAAAGGCCAGCCTGAGCCCCATGT...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCAACTCCGGGCCTCAGTTCGGGCCTCAGTTAACTGACATACTCCTGCCTAATAAACTGGGGTCCTaGTTCTTCCCTCGTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLNSGPQFGPQLTDILLPNKLGS*FFPRFR Trigger: CCTGAAACGAGGGAAGAATCAGGACCCCAGTTTATT...AGGCAGGAGTATGTCAGTTAACTGAGGCCCGAACTGAGGCCCGGAGTTGAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACTTCTCTGTGTATCCCTaGCTGTCCTGGAACTCACTC | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDFSVYP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGTCAGGGATACACAGAGAA...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAAACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTCAAAAGGGATACACACACCCCCTGCTTaGTGCCCTGTTTTTATACTG | + |
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Preference number: 2 (lower is better) Translates to: CKPGWPRTQKSACLSKGIHTPPA*CPVFIL Trigger: CAGTATAAAAACAGGGCATCAAGCAGGGGGTGTGTG...TATCCCTTTTGAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACTATCTGCTTCTGTCTTaGTCATCTGCTTGTTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDYLLLS*SSACWA Trigger: GGCCCAACAAGCAGATGACCAAGACAGAAGCAGATA...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 90 bp | TGCAAATTATCTGCTTCTGTCTTGGTCATCTGCTTGTTGGGCCTCTaGGAGGGCAGCTGCTGTCTGTACGCATACCACTTGAGATGGATC | + |
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Preference number: 2 (lower is better) Translates to: CKLSASVLVICLLGL*EGSCCLYAYHLRWI Trigger: GATCCATCTCAAGTGGTATGCGTACAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAACCGTACCGTCTCTTCATTaGTGGGGTTTTGTAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PFVSLCCYFLCPGVLSKTVPSLH*WGFVGH Trigger: GTGGCCTACAAAACCCCATCAATGAAGAGACGGTAC...GGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATCCAGCCTTCCCCTAATTCAACCACAGGGTTGCCCTGCTTTTGTCCAGCATTCGTGGGTTCTTCCTaGACTTACCACAGAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: FIQPSPNSTTGLPCFCPAFVGSS*TYHRIS Trigger: GCTGATTCTGTGGTAAGTTCAGGAAGAACCCACGAA...TGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAGGCTGGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCAACTCCGGGCCTCAGTTCGGGCCTCAGTTAACTGACATACTCCTGCCTACAGCAATCAGCATCTaGATTTCCAGTGCACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: VLNSGPQFGPQLTDILLPTAISI*ISSAQN Trigger: GTTTTGTGCACTGGAAATTCAGATGCTGATTGCTGT...AGGCAGGAGTATGTCAGTTAACTGAGGCCCGAACTGAGGCCCGGAGTTGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | CCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAACCTCTGTCTTGGTCATCTaGTTGTTGGGCCTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PFVSLCCYFLCPGVLSKTSVLVI*LLGLLE Trigger: CTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGA...GGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACCGACAAGTTTTTGGCTaGCTACTGCTGACAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDRQVFG*LLLTKA Trigger: AGCTTTTGTCAGCAGTAGGCAGCCAAAAACTTGTCG...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 90 bp | CTTCCCCTAATTCAACCACAGGGTTGCCCTGCTTTTGTCCAGCAGTaGGGTGCAAATTATCTGCTTCTGTCTTGGTCATCTGCTTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LPLIQPQGCPAFVQQ*GANYLLLSWSSACW Trigger: CCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 90 bp | GTGGTCCAGACTAAAGATGTGTACCACCATGCTGGGATCTGGGATTaGCTTTGTCCCAGGCTGACATTGAACTCAAGAGATCTTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VVQTKDVYHHAGIWD*LCPRLTLNSRDLAS Trigger: TGAGGCAAGATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGCAAATCCCAGATCCCAGCATGGTGGTACACATCTTTAGTCTGGACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTCAAAAGGGATAAGATGGATCCCAAGTTaGGCCAGTCACTATATCTTC | + |
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Preference number: 2 (lower is better) Translates to: CKPGWPRTQKSACLSKGIRWIPS*ASHYIF Trigger: GAAGATATAGTGACTGGCCCAACTTGGGATCCATCT...TATCCCTTTTGAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTCAAAAGGGATAACTCCGACAAGTTTTTaGCTGCCTACTGCTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: CKPGWPRTQKSACLSKGITPTSF*LPTADK Trigger: TTTGTCAGCAGTAGGCAGCCAAAAACTTGTCGGAGT...TATCCCTTTTGAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 90 bp | GGGCAGCTGCTGTCTGTACGCATACCACTTGAGATGGATCCCAAGTaGGGCCAGTCACTATATCTTCTTTCCCTCAGTTTCTTTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: GQLLSVRIPLEMDPK*GQSLYLLSLSFFSI Trigger: AATGGAAAAGAAACTGAGGGAAAGAAGATATAGTGACTGGCCCAACTTGGGATCCATCTCAAGTGGTATGCGTACAGACAGCAGCTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAAGATGTGTACCACCATaGTGGGATCTGGGATTTGCT | + |
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Preference number: 2 (lower is better) Translates to: MPFVSLCCYFLCPGVLSKRCVPP*WDLGFA Trigger: AGCAAATCCCAGATCCCAGCATGGTGGTACACATCT...TTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACACACAGCCTAATATTTaGACTAATTTCAGAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDTQPNI*TNFRGH Trigger: ATGCCCTCTGAAATTAGTTCAAATATTAGGCTGTGT...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAATTGGCTGCCTACTGCTaGCAAAAGCTGAAAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: MPFVSLCCYFLCPGVLSKLAAYC*QKLKNR Trigger: TCTGTTTTTCAGCTTTTGTCAGCAGTAGGCAGCCAA...TTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACAAGTTCCAACAGATATaGTGTCAAGTAAGTAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDKFQQI*CQVSRS Trigger: GCTTCTACTTACTTGACAGCATATCTGTTGGAACTT...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATCCAGCCTTCCCCTAATTCAACCACAGGGTTGCCCTGCTTTTGTCCAGCAATTTCAGAGGGCATTTaGGTCTTCACATTAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: FIQPSPNSTTGLPCFCPAISEGI*VFTLTV Trigger: TACAGTTAATGTGAAGACGCAAATGCCCTCTGAAAT...TGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAGGCTGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGACATTGAACTCAAGAGATCTTGCCTCAATCTCCTGGGATTAAAGGTGTGTATGCTGAGATCTGGTTaGAGTCTGGAAGTTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: ADIELKRSCLNLLGLKVCMLRSG*SLEVGI Trigger: AATGCCAACTTCCAGACTGCAACCAGATCTCAGCAT...ACACACCTTTAATCCCAGGAGATTGAGGCAAGATCTCTTGAGTTCAATGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCACGTCTCCAAGGACCCATTTAAGATCAGAAATGCAAGCAGTTTCATTTCACACACACACCCCCTaGTTGATGCCCTGTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: VLTSPRTHLRSEMQAVSFHTHTP*LMPCFY Trigger: ATAAAAACAGGGCATCAAGCAGGGGGTGTGTGTGTG...AAATGAAACTGCTTGCATTTCTGATCTTAAATGGGTCCTTGGAGACGTGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTCAAAAGGGATATCAATGTGTAAAGATTaGTTTCCACCATGTCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: CKPGWPRTQKSACLSKGISMCKD*FPPCLI Trigger: AATCAGACATGGTGGAAACCAATCTTTACACATTGA...TATCCCTTTTGAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAACCAAGTTGGCATTGTCATaGTATTTGAAGCATCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: PFVSLCCYFLCPGVLSKTKLALS*YLKHHL Trigger: TAGGTGATGCTTCAAATACCATGACAATGCCAACTT...GGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAACCTTTAGACAAGAATTCTaGGTCAGAATGTTTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PFVSLCCYFLCPGVLSKTFRQEF*VRMFVG Trigger: TCCCACAAACATTCTGACCCAGAATTCTTGTCTAAA...GGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCACGTCTCCAAGGACCCATTTAAGATCAGAAATGCAAGCAGTTTCATTTAAACTGTGCAGGTGCTaGGATGGTCTACTTCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: VLTSPRTHLRSEMQAVSFKLCRC*DGLLLI Trigger: GATGAGAAGTAGACCATCCCAGCACCTGCACAGTTT...AAATGAAACTGCTTGCATTTCTGATCTTAAATGGGTCCTTGGAGACGTGAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTGAACCTTTGGACCACTaGTGGCAGCATGTTCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTEPLDH*WQHVLN Trigger: GTTGAGAACATGCTGCCATCAGTGGTCCAAAGGTTC...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAACCACAGGGTTGCCCTGCTTTTGTCCAGCAGTTGGGTGCAAATTATCTGCTATTATAACAAGGACTaGAACTGCCAATATCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: FNHRVALLLSSSWVQIICYYNKD*NCQYPD Trigger: ATCTGGATATTGGCAGTTGCAGTCCTTGTTATAATA...GCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTCCCTTTTTATCTGTGTaGCCACCAAAAGGTACCGCC | + |
|
Preference number: 2 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTPFLSV*PPKGTA Trigger: GGCGGTACCTTTTGGTGGCCACACAGATAAAAAGGG...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTGTAGTTGTTTGGGGATaGTCTTGTGGACTGTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTVVVWG*SCGLCA Trigger: AGCACACAGTCCACAAGACCATCCCCAAACAACTAC...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTTTCCTCTACAGGAAATaGATGAGTTCAGGTCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTFLYRK*MSSGLT Trigger: GGTCAGACCTGAACTCATCCATTTCCTGTAGAGGAA...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTATTTGAAGCATCACCTAGCTCAATGTGTAAAGATTGGTTTCCACCATGTCAACAAGGACTGCAACTaGCAATATCCAGATTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: WYLKHHLAQCVKIGFHHVNKDCN*QYPDYN Trigger: GTTGTAATCTGGATATTGGCAGTTGCAGTCCTTGTT...GACATGGTGGAAACCAATCTTTACACATTGAGCTAGGTGATGCTTCAAATACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CAA 90 bp | AACAGCATCTTTCTTCCCACGGATTCGGTACTGATCACAAATCTTTaGGTGATTAGATGGAATTATCTTTGTCCCAAGACAATCCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NSIFLPTDSVLITNL*VIRWNYLCPKTILK Trigger: TTTGAGGATTGTCTTGGGACAAAGATAATTCCATCTAATCACCAAAAGATTTGTGATCAGTACCGAATCCGTGGGAAGAAAGATGCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGACAAGTCCAGGAAGAACCCAAGAAATGGAACAATAACACACATTTATCAAAAGCACACTTGGGAATaGCAATTCCATCCTTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SDKSRKNPRNGTITHIYQKHTWE*QFHPFP Trigger: AGGAAAAGGATGGAATTGTCATTCCCAAGTGTGCTT...TTGATAAATGTGTGTTATTGTTCCATTTCTTGGGTTCTTCCTGGACTTGTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101343.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCACGTCTCCAAGGACCCATTTAAGATCAGAAATGCAAGCAGTTTCATTTATATTAAAAGTCCTTTaGAGGAATTTTCAGGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: VLTSPRTHLRSEMQAVSFILKVL*RNFQGP Trigger: TGGTCCCTGAAAATTCCTCCAAAGGACTTTTAATAT...AAATGAAACTGCTTGCATTTCTGATCTTAAATGGGTCCTTGGAGACGTGAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTTTTTCATGGCCACTATaGCTTAAGATCTGGATCATA | + |
|
Preference number: 2 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTFSWPL*LKIWII Trigger: TATGATCCAGATCTTAAGGCATAGTGGCCATGAAAA...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR TCA 72 bp | AACACCTACCCCTCTGGCTGGGAACCTTTGGACCACTaGTGGCAGCATGTTCTCAACTCCGGGCCTCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NTYPSGWEPLDH*WQHVLNSGPQF Trigger: GAACTGAGGCCCGGAGTTGAGAACATGCTGCCATCAGTGGTCCAAAGGTTCCCAGCCAGAGGGGTAGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACGTGTACACTGCCTGGTaGGTGGCTCAGTGTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDVYTAW*VAQCLR Trigger: TCTCAGACACTGAGCCACCAACCAGGCAGTGTACAC...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | TTGGTCATCTGCTTGTTGGGCCTCTTGGAGGGCAGCTaGTGTCTGTACGCATACCACTTGAGATGGATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVICLLGLLEGS*CLYAYHLRWIP Trigger: TGGGATCCATCTCAAGTGGTATGCGTACAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | GTTGGGTGCAAATTATCTGCTTCTGTCTTGGTCATCTaGTTGTTGGGCCTCTTGGAGGGCAGCTGCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGCKLSASVLVI*LLGLLEGSCCL Trigger: CAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCACCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | GTAGCAGGGGCCTCATATCAGCTAGTGTACACTGCCTaGTTGGTGGCTCAGTGTCTGAGAGATCTTAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VAGASYQLVYTA*LVAQCLRDLRD Trigger: ATCCCTAAGATCTCTCAGACACTGAGCCACCAACCAGGCAGTGTACACTAGCTGATATGAGGCCCCTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | TGCTCTCTCACTGGAGAGGCTGAAAACTCAGTGCATTaGGGATGGATGCTTCAGCAGGCCCAATCCAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: CSLTGEAENSVH*GWMLQQAQSSI Trigger: AATGCTGGATTGGGCCTGCTGAAGCATCCATCCCCAATGCACTGAGTTTTCAGCCTCTCCAGTGAGAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCTGTAAAGGGCAAGCTCACTGGGCAACACAGTCCTCACGTCTCCAAGGACCTGTACGCATACCACTaGAGATGGATCCCAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KPVKGKLTGQHSPHVSKDLYAYH*RWIPSW Trigger: CCAACTTGGGATCCATCTCAAGTGGTATGCGTACAG...GTCCTTGGAGACGTGAGGACTGTGTTGCCCAGTGAGCTTGCCCTTTACAGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | ACAATTGCTCTCTCACTGGAGAGGCTGAAAACTCAGTaGATTGGGGATGGATGCTTCAGCAGGCCCAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: TIALSLERLKTQ*IGDGCFSRPNP Trigger: TGGATTGGGCCTGCTGAAGCATCCATCCCCAATGCACTGAGTTTTCAGCCTCTCCAGTGAGAGAGCAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | GCAAATTATCTGCTTCTGTCTTGGTCATCTGCTTGTTaGGCCTCTTGGAGGGCAGCTGCTGTCTGTACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ANYLLLSWSSAC*ASWRAAAVCTH Trigger: ATGCGTACAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | AATCACACTTGGGAGGCTAAGAACTTGGCAGTCATTTaGTCCTGGAGACTGGGTACTCAGCAGTGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NHTWEAKNLAVI*SWRLGTQQCEQ Trigger: CTGCTCACACTGCTGAGTACCCAGTCTCCAGGACCAAATGACTGCCAAGTTCTTAGCCTCCCAAGTGTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | GTACGTAGTTGTTTGGGGATGGTCTTGTGGACTGTGTaGTATGCTGAGATCTGGTTGCAGTCTGGAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRSCLGMVLWTV*YAEIWLQSGSW Trigger: CCAACTTCCAGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCCCAAACAACTACGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | GCCCTGCTTTTGTCCAGCAGTTGGGTGCAAATTATCTaGTTCTGTCTTGGTCATCTGCTTGTTGGGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALLLSSSWVQII*FCLGHLLVGPL Trigger: AAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | ACCACAGGGTTGCCCTGCTTTTGTCCAGCAGTTGGGTaGAAATTATCTGCTTCTGTCTTGGTCATCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TTGLPCFCPAVG*KLSASVLVICL Trigger: CAAGCAGATGACCAAGACAGAAGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | ATCCAGCCTTCCCCTAATTCAACCACAGGGTTGCCCTaGTTTTGTCCAGCAGTTGGGTGCAAATTATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IQPSPNSTTGLP*FCPAVGCKLSA Trigger: AGCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAGGCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | TTTAGACAAGAATTCTGGGTCAGAATGTTTGTGGGATaGCACCCCCACACACACACACACCCCCTGCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FRQEFWVRMFVG*HPHTHTHPLLD Trigger: ATCAAGCAGGGGGTGTGTGTGTGTGTGGGGGTGCCATCCCACAAACATTCTGACCCAGAATTCTTGTCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | TCCTGGTTAGTTAAGACTGCTGATCTTCCTATGGGGTaGCCCTCCTCAACTTCATCCAGCCTTCCCCTAATT | + |
|
Preference number: 3 (lower is better) Translates to: SWLVKTADLPMG*PSSTSSSLPLI Trigger: AATTAGGGGAAGGCTGGATGAAGTTGAGGAGGGCCACCCCATAGGAAGATCAGCAGTCTTAACTAACCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAACCACAGGGTTGCCCTGCTTTTGTCCAGCAGTTGGGTGCAAATTATCTGCTGTACCGTCTCTTCATaGATGGGGTTTTGTAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FNHRVALLLSSSWVQIICCTVSS*MGFCRP Trigger: TGGCCTACAAAACCCCATCAATGAAGAGACGGTACA...GCAGATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTTGCCTGGGCCTAAGCTTTTCATGGCCACTATGCCTTAAGATCTGGATCTGTTTGGGGATGGTCTaGTGGACTGTGTGCTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: IPCLGLSFSWPLCLKIWICLGMV*WTVCYA Trigger: AGCATAGCACACAGTCCACAAGACCATCCCCAAACA...GATCCAGATCTTAAGGCATAGTGGCCATGAAAAGCTTAGGCCCAGGCAAGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR TCA 72 bp | TTGTTTGGGGATGGTCTTGTGGACTGTGTGCTATGCTaGGATCTGGTTGCAGTCTGGAAGTTGGCATTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFGDGLVDCVLC*DLVAVWKLALS Trigger: TGACAATGCCAACTTCCAGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCCCAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | ACTTCATCCAGCCTTCCCCTAATTCAACCACAGGGTTaGCCTGCTTTTGTCCAGCAGTTGGGTGCAAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSSLPLIQPQG*PAFVQQLGANY Trigger: ATAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAGGCTGGATGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | GGGATGGTCTTGTGGACTGTGTGCTATGCTGAGATCTaGTTGCAGTCTGGAAGTTGGCATTGTCATGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: GMVLWTVCYAEI*LQSGSWHCHGI Trigger: AATACCATGACAATGCCAACTTCCAGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAACCGTTGCAGTCTGGAAGTaGGCATTGTCATGGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PFVSLCCYFLCPGVLSKTVAVWK*ALSWYL Trigger: CAAATACCATGACAATGCCAACTTCCAGACTGCAAC...GGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTTGCTTGTTGGGCCTCTaGGAGGGCAGCTGCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTCLLGL*EGSCCL Trigger: CAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCA...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTCAAGTAAGTAGAAGCAGTCAGAGTAAAATCTTCCTTCTTCCAATGTCCTTGGTCATCTGCTTGTaGGGCCTCTTGGAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CCQVSRSSQSKIFLLPMSLVICL*GLLEGS Trigger: GCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAA...GGACATTGGAAGAAGGAAGATTTTACTCTGACTGCTTCTACTTACTTGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAATTATCTGCTTCTGTCTaGGTCATCTGCTTGTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: MPFVSLCCYFLCPGVLSKLSASV*VICLLG Trigger: GCCCAACAAGCAGATGACCAAGACAGAAGCAGATAA...TTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR TCA 72 bp | AGGAGCACCAGGAACAGCTCCAGTAGTTTTCCAAGATaGAGTATTTGGGAATGGATGGTGGAGACAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSTRNSSSSFPR*SIWEWMVETRA Trigger: TGCTCTTGTCTCCACCATCCATTCCCAAATACTTCATCTTGGAAAACTACTGGAGCTGTTCCTGGTGCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR TCA 72 bp | TCCAGGAAACCTGTCTTCTTAAAAGGTGTTCTCAGGTaGTTCTTACACTTGGCCCAGACTATGGCTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRKPVFLKGVLR*FLHLAQTMAEA Trigger: AGCCTCAGCCATAGTCTGGGCCAAGTGTAAGAATCACCTGAGAACACCTTTTAAGAAGACAGGTTTCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | AAAAAGGTGGTACGTAGTTGTTTGGGGATGGTCTTGTaGACTGTGTGCTATGCTGAGATCTGGTTGCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KKVVRSCLGMVL*TVCYAEIWLQS Trigger: AGACTGCAACCAGATCTCAGCATAGCACACAGTCCACAAGACCATCCCCAAACAACTACGTACCACCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTCAAAAGGGATACTTTGTCTAATGATTTaGCTCAGAAGAATCTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: CKPGWPRTQKSACLSKGILCLMI*LRRILT Trigger: GGTCAAGATTCTTCTGAGCAAAATCATTAGACAAAG...TATCCCTTTTGAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTTCTGGGTCAGAATGTTaGTGGGATGGCACCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTSGSEC*WDGTPT Trigger: TGTGGGGGTGCCATCCCACAAACATTCTGACCCAGA...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | GGGTTCTTCCTGAACTTACCACAGAATCAGCAAGAGTaGTACACGTTATTAAGGGAGCCAACAGATTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GFFLNLPQNQQE*YTLLREPTDSL Trigger: CAGTGAATCTGTTGGCTCCCTTAATAACGTGTAGCACTCTTGCTGATTCTGTGGTAAGTTCAGGAAGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | GCTGGCCTGGCCTACTATTATAACAAGGACTGCAACTaGCAATATCCAGATTACAACAAGATCTCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGLAYYYNKDCN*QYPDYNKISEH Trigger: GTGCTCAGAGATCTTGTTGTAATCTGGATATTGGCAGTTGCAGTCCTTGTTATAATAGTAGGCCAGGCCAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR GCA 72 bp | GCTTTGTCCCAGGCTGACATTGAACTCAAGAGATCTTaGCTCAATCTCCTGGGATTAAAGGTGTGTAATACC | + |
|
Preference number: 3 (lower is better) Translates to: ALSQADIELKRS*LNLLGLKVCNT Trigger: GGTATTACACACCTTTAATCCCAGGAGATTGAGGCAAGATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR CCA 72 bp | GCCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTaGAGTCCTGTCCAAAACCTAATGTCAGCATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: AICEPLLLFPMP*SPVQNLMSASI Trigger: TATTGATGCTGACATTAGGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTCACGTCTCCAAGGACCCATTTAAGATCAGAAATGCAAGCAGTTTCATTTTATGCTGAGATCTGGTaGCAGTCTGGAAGTTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLTSPRTHLRSEMQAVSFYAEIW*QSGSWH Trigger: ATGCCAACTTCCAGACTGCAACCAGATCTCAGCATA...AAATGAAACTGCTTGCATTTCTGATCTTAAATGGGTCCTTGGAGACGTGAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAGATATTAAAAGTCCTTaGGAGGAATTTTCAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: MPFVSLCCYFLCPGVLSKDIKSP*EEFSGT Trigger: GGTCCCTGAAAATTCCTCCAAAGGACTTTTAATATC...TTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 72 bp | GACATGGTATTTTTATTACAAGCTTCTTGTGCTAACTaGGCAGTGTTCTCATGTGTTCTGACCCGGCTATGC | + |
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Preference number: 3 (lower is better) Translates to: DMVFLLQASCAN*AVFSCVLTRLC Trigger: GCATAGCCGGGTCAGAACACATGAGAACACTGCCCAGTTAGCACAAGAAGCTTGTAATAAAAATACCATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 72 bp | CATTTCTGTCCTTTCAGTTCTTTTAGACAAGAATTCTaGGTCAGAATGTTTGTGGGATGGCACCCCCACACA | + |
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Preference number: 3 (lower is better) Translates to: HFCPFSSFRQEF*VRMFVGWHPHT Trigger: TGTGTGGGGGTGCCATCCCACAAACATTCTGACCCAGAATTCTTGTCTAAAAGAACTGAAAGGACAGAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGACCAAGCCATGTGGTTCTACCCATTTTACCGAAAAATGACAGATTTCACTAATTCAACCACAGGGTaGCCCTGCTTTTGTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: FDQAMWFYPFYRKMTDFTNSTTG*PCFCPA Trigger: TGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATT...AGTGAAATCTGTCATTTTTCGGTAAAATGGGTAGAACCACATGGCTTGGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | ATTCTGGATTGTAGTTCATTCCAGGTAAAGTCTCATTaGCAACCAGGAACAGCCATTACAATGGCCCAATGG | + |
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Preference number: 3 (lower is better) Translates to: ILDCSSFQVKSH*QPGTAITMAQW Trigger: CCATTGGGCCATTGTAATGGCTGTTCCTGGTTGTCAATGAGACTTTACCTGGAATGAACTACAATCCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | ATTACAACAAGATCTCTGAGCACAGCAATCAGCATCTaGATTTCCAGTGCACAAAACCATCCCCATCACATA | + |
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Preference number: 3 (lower is better) Translates to: ITTRSLSTAISI*ISSAQNHPHHI Trigger: TATGTGATGGGGATGGTTTTGTGCACTGGAAATTCAGATGCTGATTGCTGTGCTCAGAGATCTTGTTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | CACCCCCTGCTTGATGCCCTGTTTTTATACTGGAATTaGCTTCTAACAGTGGAAATCACAGTTAGATTGGAT | + |
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Preference number: 3 (lower is better) Translates to: HPLLDALFLYWN*LLTVEITVRLD Trigger: ATCCAATCTAACTGTGATTTCCACTGTTAGAAGTCAATTCCAGTATAAAAACAGGGCATCAAGCAGGGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | TGGTGGAGACAAGAGCACAGCATTATCAATTTAAACTaGCTGAATCAGAAAGCAGGAAGCACTAATGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: WWRQEHSIINLN*LNQKAGSTNVW Trigger: CCACACATTAGTGCTTCCTGCTTTCTGATTCAGTCAGTTTAAATTGATAATGCTGTGCTCTTGTCTCCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | AGTCCTGTCCAAAACCTAATGTCAGCATCAATACTATaGAGTGCTTCCACTATGTGTTCTGCTAACACAGAA | + |
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Preference number: 3 (lower is better) Translates to: SPVQNLMSASIL*SASTMCSANTE Trigger: TTCTGTGTTAGCAGAACACATAGTGGAAGCACTTCATAGTATTGATGCTGACATTAGGTTTTGGACAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR GCA 72 bp | TATGGGGTCTATATAAAGAGAAATGTGTCTTACTGCTaGATTTCGTGGGTTCTTCCTGAACTTACCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: YGVYIKRNVSYC*ISWVLPELTTE Trigger: TTCTGTGGTAAGTTCAGGAAGAACCCACGAAATGCAGCAGTAAGACACATTTCTCTTTATATAGACCCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | CTGGGATGGTCTACTTCTCATCTCTATAGAAATCTATaGCTAAGTATTTCTACTAAGCACTGTCTAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGWSTSHLYRNL*LSISTKHCLAS Trigger: AGAGGCTAGACAGTGCTTAGTAGAAATACTTAGTCATAGATTTCTATAGAGATGAGAAGTAGACCATCCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 72 bp | TATATAAAGAGAAATGTGTCTTACTGCTGCATTTCGTaGGTTCTTCCTGAACTTACCACAGAATCAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: YIKRNVSYCCIS*VLPELTTESAR Trigger: TCTTGCTGATTCTGTGGTAAGTTCAGGAAGAACCCACGAAATGCAGCAGTAAGACACATTTCTCTTTATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| 3UTR CCA 72 bp | CCAGTAGTTTTCCAAGATGAAGTATTTGGGAATGGATaGTGGAGACAAGAGCACAGCATTATCAATTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: PVVFQDEVFGNG*WRQEHSIINLN Trigger: GTTTAAATTGATAATGCTGTGCTCTTGTCTCCACCATCCATTCCCAAATACTTCATCTTGGAAAACTACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | ATAAGAAACACAAGGCTGACAACACAGCCTAATATTTaGACTAATTTCAGAGGGCATTTGCGTCTTCACATT | + |
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Preference number: 3 (lower is better) Translates to: IRNTRLTTQPNI*TNFRGHLRLHI Trigger: AATGTGAAGACGCAAATGCCCTCTGAAATTAGTTCAAATATTAGGCTGTGTTGTCAGCCTTGTGTTTCTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | TTACACGGGAGGCATAGAATTTCAATATATAGCATTTaGATTCACTGGATCTGGGACACTAATCAAAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: LHGRHRISIYSI*IHWIWDTNQRY Trigger: GTACCTTTGATTAGTGTCCCAGATCCAGTGAATTCAAATGCTATATATTGAAATTCTATGCCTCCCGTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | CTAGCTCAATGTGTAAAGATTGGTTTCCACCATGTCTaGTTGGTTAATAAAGCCCTACAAAATGTAAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: LAQCVKIGFHHV*LVNKALQNVKV Trigger: TACTTTTACATTTTGTAGGGCTTTATTAACCAATCAGACATGGTGGAAACCAATCTTTACACATTGAGCTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR TCA 72 bp | AAATATTGTAAATTCTCAAACAGCCTGGGCTACTTATaGGTTCTAGGCCAGTGTCTAGTTTTGTATTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: KYCKFSNSLGYL*VLGQCLVLYFL Trigger: AAGAAAATACAAAACTAGACACTGGCCTAGAACTCATAAGTAGCCCAGGCTGTTTGAGAATTTACAATATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CCA 72 bp | GAAGGAGAGAAACTGCTAATATGTTTAAATCAAGTATaGTATAGTTTTCAGTTTTACACGGGAGGCATAGAA | + |
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Preference number: 3 (lower is better) Translates to: EGEKLLICLNQV*YSFQFYTGGIE Trigger: TTCTATGCCTCCCGTGTAAAACTGAAAACTATACCATACTTGATTTAAACATATTAGCAGTTTCTCTCCTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| CDS-3UTR TCA 90 bp | CACTCTTGTCGACTCAGACAAGTCCAGGAAGAACCCAAGAAATGGAACAATAACCGCTCCCACGCAGGGTaGTGCCTTGCTCTCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HSCRLRQVQEEPKKWNNNRSHAG*CLALGR Trigger: TCGCCCGAGAGCAAGGCATCACCCTGCGTGGGAGCG...GTTATTGTTCCATTTCTTGGGTTCTTCCTGGACTTGTCTGAGTCGACAAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101343.2 |
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| 3UTR CAA 72 bp | TCTGCTTCTGTCTTGGTCATCTGCTTGTTGGGCCTCTaGGAGGGCAGCTGCTGTCTGTACGCATACCACTTG | + |
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Preference number: 4 (lower is better) Translates to: SASVLVICLLGL*EGSCCLYAYHL Trigger: CAAGTGGTATGCGTACAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | GCAGGGGCCTCATATCAGCTAGTGTACACTGCCTGGTaGGTGGCTCAGTGTCTGAGAGATCTTAGGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: AGASYQLVYTAW*VAQCLRDLRDP Trigger: AGGATCCCTAAGATCTCTCAGACACTGAGCCACCAACCAGGCAGTGTACACTAGCTGATATGAGGCCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| CDS-3UTR TCA 90 bp | ACAGACATGGTATTTTTATTACAAGCTTCTTGTGCTAACTGGGCAGTGTTCTCACGCTCCCACGCAGGGTaGTGCCTTGCTCTCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: TDMVFLLQASCANWAVFSRSHAG*CLALGR Trigger: TCGCCCGAGAGCAAGGCATCACCCTGCGTGGGAGCG...TGAGAACACTGCCCAGTTAGCACAAGAAGCTTGTAATAAAAATACCATGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | TGCAAATTATCTGCTTCTGTCTTGGTCATCTGCTTGTaGGGCCTCTTGGAGGGCAGCTGCTGTCTGTACGCA | + |
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Preference number: 4 (lower is better) Translates to: CKLSASVLVICL*GLLEGSCCLYA Trigger: TGCGTACAGACAGCAGCTGCCCTCCAAGAGGCCCAACAAGCAGATGACCAAGACAGAAGCAGATAATTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | TCAGTTCTTTTAGACAAGAATTCTGGGTCAGAATGTTaGTGGGATGGCACCCCCACACACACACACACCCCC | + |
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Preference number: 4 (lower is better) Translates to: SVLLDKNSGSEC*WDGTPTHTHTP Trigger: GGGGGTGTGTGTGTGTGTGGGGGTGCCATCCCACAAACATTCTGACCCAGAATTCTTGTCTAAAAGAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | GCTGGGATCTGGGATTTGCTTTGTCCCAGGCTGACATaGAACTCAAGAGATCTTGCCTCAATCTCCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: AGIWDLLCPRLT*NSRDLASISWD Trigger: ATCCCAGGAGATTGAGGCAAGATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGCAAATCCCAGATCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | AACTTCATCCAGCCTTCCCCTAATTCAACCACAGGGTaGCCCTGCTTTTGTCCAGCAGTTGGGTGCAAATTA | + |
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Preference number: 4 (lower is better) Translates to: NFIQPSPNSTTG*PCFCPAVGCKL Trigger: TAATTTGCACCCAACTGCTGGACAAAAGCAGGGCAACCCTGTGGTTGAATTAGGGGAAGGCTGGATGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | TGCCTCAATCTCCTGGGATTAAAGGTGTGTAATACCTaGCCTGGGCCTAAGCTTTTCATGGCCACTATGCCT | + |
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Preference number: 4 (lower is better) Translates to: CLNLLGLKVCNT*PGPKLFMATMP Trigger: AGGCATAGTGGCCATGAAAAGCTTAGGCCCAGGCAAGGTATTACACACCTTTAATCCCAGGAGATTGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | AGATGTGTACCACCATGCTGGGATCTGGGATTTGCTTaGTCCCAGGCTGACATTGAACTCAAGAGATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RCVPPCWDLGFA*SQADIELKRSC Trigger: GCAAGATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGCAAATCCCAGATCCCAGCATGGTGGTACACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | TGTACTGTTGTGATGAAAAAGGTGGTACGTAGTTGTTaGGGGATGGTCTTGTGGACTGTGTGCTATGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: CTVVMKKVVRSC*GMVLWTVCYAE Trigger: CTCAGCATAGCACACAGTCCACAAGACCATCCCCAAACAACTACGTACCACCTTTTTCATCACAACAGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | ACTAAAGATGTGTACCACCATGCTGGGATCTGGGATTaGCTTTGTCCCAGGCTGACATTGAACTCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKDVYHHAGIWD*LCPRLTLNSRD Trigger: ATCTCTTGAGTTCAATGTCAGCCTGGGACAAAGCAAATCCCAGATCCCAGCATGGTGGTACACATCTTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| CDS-3UTR TCA 90 bp | CCATTTGTGAGCCTCTGCTGTTATTTCCTATGCCCTGGAGTCCTGTCCAAAACCAATCTGTCTAATCACTaGGCGAATTTCATCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFVSLCCYFLCPGVLSKTNLSNH*ANFILY Trigger: ATACAGGATGAAATTCGCTCAGTGATTAGACAGATT...GGTTTTGGACAGGACTCCAGGGCATAGGAAATAACAGCAGAGGCTCACAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | CTGGTTGCAGTCTGGAAGTTGGCATTGTCATGGTATTaGAAGCATCACCTAGCTCAATGTGTAAAGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVAVWKLALSWY*KHHLAQCVKIG Trigger: ACCAATCTTTACACATTGAGCTAGGTGATGCTTCAAATACCATGACAATGCCAACTTCCAGACTGCAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| CDS-3UTR GCA 90 bp | AACTTACCACAGAATCAGCAAGAGTGCTACACGTTATTAAGGGAGCCAACAGATGTGAGTCCATATTTCTaGACTCTAGTAAAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLPQNQQECYTLLREPTDVSPYF*TLVKVS Trigger: GGAAACCTTTACTAGAGTGCAGAAATATGGACTCAC...ATCTGTTGGCTCCCTTAATAACGTGTAGCACTCTTGCTGATTCTGTGGTAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| CDS-3UTR TCA 90 bp | AACTTACCACAGAATCAGCAAGAGTGCTACACGTTATTAAGGGAGCCAACAGATAATCTGTCTAATCACTaGGCGAATTTCATCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPQNQQECYTLLREPTDNLSNH*ANFILY Trigger: ATACAGGATGAAATTCGCTCAGTGATTAGACAGATT...ATCTGTTGGCTCCCTTAATAACGTGTAGCACTCTTGCTGATTCTGTGGTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101343.2 ENSMUST00000116605.8 |
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| 3UTR CAA 72 bp | GCAACTCTATTTGACTTAATTTCTGGAAAAGCACACTaGGGAATGACAATTCCATCCTTTTCCTCACCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATLFDLISGKAH*GMTIPSFSSPS Trigger: AGACGGTGAGGAAAAGGATGGAATTGTCATTCCCAAGTGTGCTTTTCCAGAAATTAAGTCAAATAGAGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101343.2 |
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| 3UTR CAA 72 bp | TTTCTTCCCACGGATTCGGTACTGATCACAAATCTTTaGGTGATTAGATGGAATTATCTTTGTCCCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FLPTDSVLITNL*VIRWNYLCPKT Trigger: TGTCTTGGGACAAAGATAATTCCATCTAATCACCAAAAGATTTGTGATCAGTACCGAATCCGTGGGAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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| CDS-3UTR GCA 90 bp | CATTTAAACGCTTCTTTATATCCTGGTCCAGTTACAATGTTAAGGGAAGTAGTTGTGAGTCCATATTTCTaGACTCTAGTAAAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLNASLYPGPVTMLREVVVSPYF*TLVKVS Trigger: GGAAACCTTTACTAGAGTGCAGAAATATGGACTCAC...AACTACTTCCCTTAACATTGTAACTGGACCAGGATATAAAGAAGCGTTTAAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101343.2 |
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| 3UTR CAA 72 bp | AAGGATGAAAACATTTCAGGTAGAGAGCAAAGATGGTaGAATCAACCAAAGGCAAAAGACTTTCAATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDENISGREQRW*NQPKAKDFQLE Trigger: TTCTAATTGAAAGTCTTTTGCCTTTGGTTGATTCAACCATCTTTGCTCTCTACCTGAAATGTTTTCATCCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116605.8 |
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