Pregenerated sensors for MACROH2A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020086Ensembl transcript IDs: ENSMUST00000020283.5
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGACAGCCAGTATACCTAGGATGGGCAGTCACATCCTTTTCTCTTaGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGATTT | + |
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Preference number: 1 (lower is better) Translates to: ETASIPRMGSHILFS*KKEEPKDTETVNRF Trigger: AAATCTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACTGGCTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| 3UTR-3UTR GCA 90 bp | TACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGAAAGAGAATATAAAATaGACCGGACCCCTTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: YLGWAVTSFSLGKRRNPKKENIK*TGPLHQ Trigger: CTGGTGAAGGGGTCCGGTGCATTTTATATTCTCTTT...CTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGATTTTGAAGAAGAAAAACACATaGAAAGAAAGCCCTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FLLEKGGTQRHRNCEQILKKKNT*KESPGG Trigger: TCCACCAGGGCTTTCTTTCCATGTGTTTTTCTTCTT...CAAAATCTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| 3UTR GCA 72 bp | TGTGGAAGAGAGGCCCTTTGTAAAGAGAATATAAAATaGACCGGACCCCTTCACCAGGCAGGCAGGACCTGT | + |
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Preference number: 3 (lower is better) Translates to: CGREALCKENIK*TGPLHQAGRTC Trigger: ACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATTTTATATTCTCTTTACAAAGGGCCTCTCTTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| 3UTR CCA 72 bp | AGTATACCTAGGATGGGCAGTCACATCCTTTTCTCTTaGAAAAAGGAGGAACCCAAAGACACAGAAACTGTG | + |
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Preference number: 3 (lower is better) Translates to: SIPRMGSHILFS*KKEEPKDTETV Trigger: CACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGAGAGTGTGTAAAAGTCACTaGTATAAATCTAAAGAAGGCCTATTTTTATGTTTG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVRVCKSH*YKSKEGLFLCL Trigger: CAAACATAAAAATAGGCCTTCTTTAGATTTATAGCAGTGACTTTTACACACTCTCACACACACACACACACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCGGCCTACTGGAAAGATaGCGCCGGCCCTGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: GRQDLFPLPPFTLSATLRGLLER*RRPWLT Trigger: GGTCAGCCAGGGCCGGCGTCATCTTTCCAGTAGGCC...GCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | GGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCTGGTTGGGTGGACGATaGCCTCCACCCTCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GRQDLFPLPPFTLSATLRWLGGR*PPPSWS Trigger: GCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCA...GCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCTCCCATGCTGGTCCCTCGCTTCTTaGCCAGCAGTTCGGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GPVPAASVHPLSHPPLPCWSLAS*PAVRGG Trigger: TCCACCCCGAACTGCTGGCCAAGAAGCGAGGGACCA...GCATGGGAGCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTGCCTTGAGGGTCACCTaGGCGGCCGTCTGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NAPDPFTRQAGPVPAASVALRVT*AAVCLG Trigger: CCCCAAACAGACGGCCGCCCAGGTGACCCTCAAGGC...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCTCCCATGCCATCAACCGGCCTACTaGAAAGATGACGCCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GPVPAASVHPLSHPPLPCHQPAY*KDDAGP Trigger: AGGGCCGGCGTCATCTTTCCAGTAGGCCGGTTGATG...GCATGGGAGCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCACGTCCGTGGCTTGGTaGCCTTGGATTTCTTACCCC | + |
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Preference number: 4 (lower is better) Translates to: GRQDLFPLPPFTLSATLRTSVAW*PWISYP Trigger: GGGGTAAGAAATCCAAGGCCACCAAGCCACGGACGT...GCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCTGGACGTCCGTGGCTTaGTGGCCTTGGATTTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: GRQDLFPLPPFTLSATLRWTSVA*WPWISY Trigger: GTAAGAAATCCAAGGCCACCAAGCCACGGACGTCCA...GCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCGGATCGTCTCTGACTTaGCTTTGGTCCCTCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PGRQDLFPLPPFTLSATLGSSLT*LWSLAS Trigger: AGAAGCGAGGGACCAAAGGCAAGTCAGAGACGATCC...GAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCACTTCCAAAGGGCCTTaGGACTTGCGAAGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGRQDLFPLPPFTLSATLTSKGP*DLRSSF Trigger: GAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGT...GAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTTGGAGCCAATATGGCTaGTGTCACTCTGGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NAPDPFTRQAGPVPAASVWSQYG*CHSGSG Trigger: CCCTGACCCAGAGTGACATCAGCCATATTGGCTCCA...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | GGAAAGAAAGCCCTGGTGGAGACCTGGTTAACTGTGGAAGAGAGGCCCTTTGTAGAGCCGAGATGGCCTTaGGGGTCACCTGGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GKKALVETWLTVEERPFVEPRWP*GSPGRP Trigger: CGGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCTC...TACAAAGGGCCTCTCTTCCACAGTTAACCAGGTCTCCACCAGGGCTTTCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | GGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCTCCCATGCGATGACAAATTTGGCTaGGAGTCCACTGGATTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GPVPAASVHPLSHPPLPCDDKFG*ESTGLA Trigger: AGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATC...GCATGGGAGCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCTCCCATGCGCCCATCCTCCGAGGTaGAATTTGATGTTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GPVPAASVHPLSHPPLPCAHPPR*NLMFLL Trigger: AAGAAGGAACATCAAATTCCACCTCGGAGGATGGGC...GCATGGGAGCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCAGACAGGCAGTTTTTaGTGGTCTCTTCCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: NAPDPFTRQAGPVPAASVQTGSF*WSLPAV Trigger: AACAGCTGGAAGAGACCATCAAAAACTGCCTGTCTG...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCTTCTTGTCCTCTGCTaGAGACAGGCAGTTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: NAPDPFTRQAGPVPAASVLLVLC*RQAVFD Trigger: ATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAG...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTAAGCTTCTTGTCCTCTaGTGCAGACAGGCAGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: NAPDPFTRQAGPVPAASVKLLVL*CRQAVF Trigger: AAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTT...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGAAAGCCCTGGTGGAGACCTGGTTAACTGTGGAAGAGAGGCCCTTTGTACCAGCAGGATGTGTCTaGGGGCTATCCGTGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GKKALVETWLTVEERPFVPAGCV*GLSVPS Trigger: AGAAGGCACGGATAGCCCCCAGACACATCCTGCTGG...TACAAAGGGCCTCTCTTCCACAGTTAACCAGGTCTCCACCAGGGCTTTCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGGACGCCGGCCCTGGCTaGCCGGGACAGCTTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQDAGPG*PGQLGH Trigger: ATGTCCAAGCTGTCCCGGTCAGCCAGGGCCGGCGTC...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | TACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGCTCGAGTCGTCGAAGTaGGCCGAGATGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: YLGWAVTSFSLGKRRNPKLESSK*AEMALR Trigger: CCTCAAGGCCATCTCGGCTCACTTCGACGACTCGAG...CTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | CCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACGCACGTAGATGCCGATaGTCTCGCTGTCGAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PRMGSHILFSWKKEEPKDARRCR*SRCRRA Trigger: TGCTCTTCGACAGCGAGAGCATCGGCATCTACGTGC...GTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGGCCAGCAGTTCGGGGTaGATTCTCGGCAGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQASSSG*ILGRTP Trigger: GGGTGTCCTGCCGAGAATCCACCCCGAACTGCTGGC...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGTCGGCTGTGGTTGGGTaGACGATGCCCTCCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQSAVVG*TMPSTL Trigger: GAGGGTGGAGGGCATCGTCCACCCAACCACAGCCGA...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GTTAACTGTGGAAGAGAGGCCCTTTGTAAAGAGAATATAAAATGCACCGGACCCGGTCGATCTCGGCTGTaGTTGGGTGGACGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VNCGREALCKENIKCTGPGRSRL*LGGRCP Trigger: AGGGCATCGTCCACCCAACCACAGCCGAGATCGACC...GGGTCCGGTGCATTTTATATTCTCTTTACAAAGGGCCTCTCTTCCACAGTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GTTAACTGTGGAAGAGAGGCCCTTTGTAAAGAGAATATAAAATGCACCGGACCCGGGCGGCCGTCTGTTTaGGGAAGCAGTTTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VNCGREALCKENIKCTGPGRPSV*GSSFCH Trigger: GTGGCAGAAACTGCTTCCCCAAACAGACGGCCGCCC...GGGTCCGGTGCATTTTATATTCTCTTTACAAAGGGCCTCTCTTCCACAGTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGAAAGCCCTGGTGGAGACCTGGTTAACTGTGGAAGAGAGGCCCTTTGTAACTTGGTGTCCAGTTTaGCCATCTCCTGCACGTAGA | + |
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Preference number: 4 (lower is better) Translates to: GKKALVETWLTVEERPFVTWCPV*PSPARR Trigger: TCTACGTGCAGGAGATGGCCAAACTGGACACCAAGT...TACAAAGGGCCTCTCTTCCACAGTTAACCAGGTCTCCACCAGGGCTTTCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | GCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGGCCACTGGGGAACGGTaGGAAGGCGACGGATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: AVTSFSLGKRRNPKTQKLATGER*EGDGFK Trigger: CTTAAATCCGTCGCCTTCCCACCGTTCCCCAGTGGC...CAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGGGAGAGGATCGTCTCTaGCTTGCCTTTGGTCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQGEDRL*LAFGPS Trigger: CGAGGGACCAAAGGCAAGTCAGAGACGATCCTCTCC...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | CAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTTCTGGGGGCTATCCGTaGCTTCTTGTTGTCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: QSHPFLLEKGGTQRHRNCSGGYP*LLVVPR Trigger: GCGAGGGACAACAAGAAGGCACGGATAGCCCCCAGA...ACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | TACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGCTGACCGGGACAGCTTaGACATTTTCTTCTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: YLGWAVTSFSLGKRRNPKLTGTA*TFSSSR Trigger: GCGGGAAGAAGAAAATGTCCAAGCTGTCCCGGTCAG...CTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | TACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGGGATGTGACAGTGGATaGCAAATTTGGCTGCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: YLGWAVTSFSLGKRRNPKGCDSG*QIWLRV Trigger: GACTCGCAGCCAAATTTGTCATCCACTGTCACATCC...CTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGATTTTGGATCTCGGCTGTGGTTaGGTGGACGATGCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLEKGGTQRHRNCEQILDLGCG*VDDALH Trigger: GTGGAGGGCATCGTCCACCCAACCACAGCCGAGATC...CAAAATCTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGATTTTGGCGAGTCCACTGGATTaGCTGACGGCAGCTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: FLLEKGGTQRHRNCEQILASPLD*LTAASA Trigger: CGCTGAAGCTGCCGTCAGCCAATCCAGTGGACTCGC...CAAAATCTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGTGGCTGATGTCACTCTaGGTCAGGGATAGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQWLMSL*VRDSFC Trigger: GCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCA...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | CAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTAAGGGCCTTGGGACTTaGGAAGCTCCTTCACTGTTT | + |
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Preference number: 4 (lower is better) Translates to: QSHPFLLEKGGTQRHRNCKGLGT*EAPSLF Trigger: AAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTT...ACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CCA 90 bp | CAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTCTCATGGAGCCAATATaGCTGATGTCACTCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QSHPFLLEKGGTQRHRNCLMEPI*LMSLWV Trigger: GACCCAGAGTGACATCAGCCATATTGGCTCCATGAG...ACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR TCA 90 bp | TTGTGTGTGTGTGTGTGTGTGAGAGTGTGTAAAAGTCACTGCTATAAATCTAAACCCCACTGGGGGATGTaGCAGTGGATGACAAATTTG | + |
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Preference number: 4 (lower is better) Translates to: LCVCVCVRVCKSHCYKSKPHWGM*QWMTNL Trigger: CAAATTTGTCATCCACTGTCACATCCCCCAGTGGGG...TTTAGATTTATAGCAGTGACTTTTACACACTCTCACACACACACACACACACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR GCA 90 bp | TACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGTTTATCGCTGTCCTTTaGTTTAGACTTCTTGGACGT | + |
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Preference number: 4 (lower is better) Translates to: YLGWAVTSFSLGKRRNPKFIAVL*FRLLGR Trigger: ACGTCCAAGAAGTCTAAAGCAAAGGACAGCGATAAA...CTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| 3UTR CAA 72 bp | GGAGGAACCCAAAGACACAGAAACTGTGAACAGATTTaGTGTGTGTGTGTGTGTGTGAGAGTGTGTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: GGTQRHRNCEQI*CVCVCVRVCKS Trigger: ACTTTTACACACTCTCACACACACACACACACACAAAATCTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCTTGGTCCCTCGCTTCTaGGCCAGCAGTTCGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: PGRQDLFPLPPFTLSATLLVPRF*ASSSGW Trigger: CCACCCCGAACTGCTGGCCAAGAAGCGAGGGACCAA...GAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCCGCGACTTCCAAAGGGCCTaGGGACTTGCGAAGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GRQDLFPLPPFTLSATLRDFQRA*GLAKLL Trigger: AAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTC...GCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTTGCGAGTCCACTGGATaGGCTGACGGCAGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NAPDPFTRQAGPVPAASVCESTG*ADGSFS Trigger: GCTGAAGCTGCCGTCAGCCAATCCAGTGGACTCGCA...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 90 bp | TCAGCGAGGACGAGCTCGAGTCGTCGAAGTGAGCCGAGATGGCCTTaGGGGTCACCTGGGCGGCCGTCTGTTTGGGGAAGCAGTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SARTSSSRRSEPRWP*GSPGRPSVWGSSFC Trigger: GCAGAAACTGCTTCCCCAAACAGACGGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCTCACTTCGACGACTCGAGCTCGTCCTCGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTCACCCTCTCAGCCACCCTCAAAGGGCCTTGGGACTaGCGAAGCTCCTTCACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGRQDLFPLPPFTLSATLKGPWD*RSSFTV Trigger: AACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTT...GAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 90 bp | TGGTTGGGTGGACGATGCCCTCCACCCTCATGGAGCCAATATGGCTaGTGTCACTCTGGGTCAGGGATAGCTTCTGCCCCAGAACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLGGRCPPPSWSQYG*CHSGSGIASAPERG Trigger: GCCTCGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 90 bp | AGGAAGTACACATTCTTCAGCGAGGACGAGCTCGAGTCGTCGAAGTaGGCCGAGATGGCCTTGAGGGTCACCTGGGCGGCCGTCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKYTFFSEDELESSK*AEMALRVTWAAVCL Trigger: CAAACAGACGGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCTCACTTCGACGACTCGAGCTCGTCCTCGCTGAAGAATGTGTACTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 90 bp | GCTGTGGTTGGGTGGACGATGCCCTCCACCCTCATGGAGCCAATATaGCTGATGTCACTCTGGGTCAGGGATAGCTTCTGCCCCAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: AVVGWTMPSTLMEPI*LMSLWVRDSFCPRT Trigger: CGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | AATGCACCGGACCCCTTCACCAGGCAGGCAGGACCTGTTCCCGCTGCCTCCGTTACGGATTTAAGCTTCTaGTCCTCTGCTGCAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NAPDPFTRQAGPVPAASVTDLSF*SSAADR Trigger: CCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGT...AACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGGTGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS GCA 90 bp | GTCGGAGCCCCACTGGGGGATGTGACAGTGGATGACAAATTTGGCTaGGAGTCCACTGGATTGGCTGACGGCAGCTTCAGCGACTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VGAPLGDVTVDDKFG*ESTGLADGSFSDFQ Trigger: TTGGAAGTCGCTGAAGCTGCCGTCAGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTGTCACATCCCCCAGTGGGGCTCCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 90 bp | ACGATGCCCTCCACCCTCATGGAGCCAATATGGCTGATGTCACTCTaGGTCAGGGATAGCTTCTGCCCCAGAACGAGGCTCTTCGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TMPSTLMEPIWLMSL*VRDSFCPRTRLFED Trigger: GTCTTCGAAGAGCCTCGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 90 bp | GGGATAGCTTCTGCCCCAGAACGAGGCTCTTCGAAGACAAGATGGTaGAGCCATCTCCCGGCCCATCCTCCGAGGTGGAATTTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GIASAPERGSSKTRW*SHLPAHPPRWNLMF Trigger: GAACATCAAATTCCACCTCGGAGGATGGGCCGGGAGATGGCTTCACCATCTTGTCTTCGAAGAGCCTCGTTCTGGGGCAGAAGCTATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 90 bp | GCTTTCCCTATCTCTTCCTTGAGGTCGATCTCGGCTGTGGTTGGGTaGACGATGCCCTCCACCCTCATGGAGCCAATATGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFPISSLRSISAVVG*TMPSTLMEPIWLMS Trigger: TGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCACAGCCGAGATCGACCTCAAGGAAGAGATAGGGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 90 bp | CAAGGCTTTCCCTATCTCTTCCTTGAGGTCGATCTCGGCTGTGGTTaGGTGGACGATGCCCTCCACCCTCATGGAGCCAATATGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGFPYLFLEVDLGCG*VDDALHPHGANMAD Trigger: ATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCACAGCCGAGATCGACCTCAAGGAAGAGATAGGGAAAGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 90 bp | AGGTTCCCTTTTTCAAGTAGCGCATCAACCGGCCTACTGGAAAGATaGCGCCGGCCCTGGCTGACCGGGACAGCTTGGACATTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFPFSSSASTGLLER*RRPWLTGTAWTFSS Trigger: AGAAGAAAATGTCCAAGCTGTCCCGGTCAGCCAGGGCCGGCGTCATCTTTCCAGTAGGCCGGTTGATGCGCTACTTGAAAAAGGGAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 90 bp | CCACTGGATTGGCTGACGGCAGCTTCAGCGACTTCCAAAGGGCCTTaGGACTTGCGAAGCTCCTTCACTGTTTCCAAGAACTCTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: PLDWLTAASATSKGP*DLRSSFTVSKNSLP Trigger: GGGTAAAGAGTTCTTGGAAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGCTGCCGTCAGCCAATCCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 90 bp | TCTTCCAGCTGTTCTTCACATTTGTCGGAGCCCCACTGGGGGATGTaGCAGTGGATGACAAATTTGGCTGCGAGTCCACTGGATTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSSHLSEPHWGM*QWMTNLAASPLDWL Trigger: CAGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTGTCACATCCCCCAGTGGGGCTCCGACAAATGTGAAGAACAGCTGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | ACAGCCAGTATACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGCGATCTCGGCTGTGGTaGGGTGGACGATGCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TASIPRMGSHILFSWKKERSRLW*GGRCPP Trigger: TGGAGGGCATCGTCCACCCAACCACAGCCGAGATCG...CTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACTGGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS GCA 90 bp | ATGGAGCCAATATGGCTGATGTCACTCTGGGTCAGGGATAGCTTCTaGCCCAGAACGAGGCTCTTCGAAGACAAGATGGTGAAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: MEPIWLMSLWVRDSF*PRTRLFEDKMVKPS Trigger: AGATGGCTTCACCATCTTGTCTTCGAAGAGCCTCGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS GCA 90 bp | ACTGGGGAACGGTGGGAAGGCGACGGATTTAAGCTTCTTGTCCTCTaGTGCAGACAGGCAGTTTTTGATGGTCTCTTCCAGCTGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGERWEGDGFKLLVL*CRQAVFDGLFQLFF Trigger: GAAGAACAGCTGGAAGAGACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGTCGCCTTCCCACCGTTCCCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACAGCTGTTCTTCACATTaGTCGGAGCCCCACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRMGSHILFSWKKEEPKDSCSSH*SEPHWG Trigger: CCCCCAGTGGGGCTCCGACAAATGTGAAGAACAGCT...GTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | ACAGCCAGTATACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGCTATCCGTGCCTTCTaGTTGTCCCTCGCAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TASIPRMGSHILFSWKKEAIRAF*LSLAAF Trigger: GAACGCTGCGAGGGACAACAAGAAGGCACGGATAGC...CTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACTGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACAGGATCGTCTCTGACTaGCCTTTGGTCCCTCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRMGSHILFSWKKEEPKDRIVSD*PLVPRF Trigger: GAAGCGAGGGACCAAAGGCAAGTCAGAGACGATCCT...GTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | ACAGCCAGTATACCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGTTGGACGTCCGTGGCTaGGTGGCCTTGGATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TASIPRMGSHILFSWKKELDVRG*VALDFL Trigger: TAAGAAATCCAAGGCCACCAAGCCACGGACGTCCAA...CTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACTGGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CCTAGGATGGGCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACGCAGACAGGCAGTTTTaGATGGTCTCTTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRMGSHILFSWKKEEPKDADRQF*MVSSSC Trigger: ACAGCTGGAAGAGACCATCAAAAACTGCCTGTCTGC...GTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | GCAGTCACATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGCAGTGGATGACAAATTaGGCTGCGAGTCCACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVTSFSLGKRRNPKTQKLQWMTN*AASPLD Trigger: ATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTG...CAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGCCTCCGAGGTGGAATTaGATGTTCCTTCTTTATCGC | + |
|
Preference number: 5 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQPPRWN*MFLLYR Trigger: GCGATAAAGAAGGAACATCAAATTCCACCTCGGAGG...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS-3UTR CAA 90 bp | CATCCTTTTCTCTTGGAAAAAGGAGGAACCCAAAGACACAGAAACTGTGAACAGACGCTGATCCTGTACTaGAAGGTTCCCTTTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HPFLLEKGGTQRHRNCEQTLILY*KVPFFK Trigger: CTTGAAAAAGGGAACCTTCAAGTACAGGATCAGCGT...CTGTTCACAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 72 bp | ACGAGCTCGAGTCGTCGAAGTGAGCCGAGATGGCCTTaGGGGTCACCTGGGCGGCCGTCTGTTTGGGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSSRRSEPRWP*GSPGRPSVWGS Trigger: GCTTCCCCAAACAGACGGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCTCACTTCGACGACTCGAGCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CAA 72 bp | GAGATGGCCTTGAGGGTCACCTGGGCGGCCGTCTGTTaGGGGAAGCAGTTTCTGCCACTGGGGAACGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EMALRVTWAAVC*GKQFLPLGNGG Trigger: CCCACCGTTCCCCAGTGGCAGAAACTGCTTCCCCAAACAGACGGCCGCCCAGGTGACCCTCAAGGCCATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 72 bp | ACATTCTTCAGCGAGGACGAGCTCGAGTCGTCGAAGTaGGCCGAGATGGCCTTGAGGGTCACCTGGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFFSEDELESSK*AEMALRVTWAA Trigger: GGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCTCACTTCGACGACTCGAGCTCGTCCTCGCTGAAGAATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS TCA 72 bp | GGACGATGCCCTCCACCCTCATGGAGCCAATATGGCTaGTGTCACTCTGGGTCAGGGATAGCTTCTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRCPPPSWSQYG*CHSGSGIASAP Trigger: TGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CCA 72 bp | GGGTGGACGATGCCCTCCACCCTCATGGAGCCAATATaGCTGATGTCACTCTGGGTCAGGGATAGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GWTMPSTLMEPI*LMSLWVRDSFC Trigger: GCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 72 bp | CCCTATCTCTTCCTTGAGGTCGATCTCGGCTGTGGTTaGGTGGACGATGCCCTCCACCCTCATGGAGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PYLFLEVDLGCG*VDDALHPHGAN Trigger: ATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCACAGCCGAGATCGACCTCAAGGAAGAGATAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CCA 72 bp | TCCACCCTCATGGAGCCAATATGGCTGATGTCACTCTaGGTCAGGGATAGCTTCTGCCCCAGAACGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: STLMEPIWLMSL*VRDSFCPRTRL Trigger: GAGCCTCGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 72 bp | ATCTCTTCCTTGAGGTCGATCTCGGCTGTGGTTGGGTaGACGATGCCCTCCACCCTCATGGAGCCAATATGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSLRSISAVVG*TMPSTLMEPIW Trigger: CCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCACAGCCGAGATCGACCTCAAGGAAGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 90 bp | GATTGGCTGACGGCAGCTTCAGCGACTTCCAAAGGGCCTTGGGACTaGCGAAGCTCCTTCACTGTTTCCAAGAACTCTTTACCCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DWLTAASATSKGPWD*RSSFTVSKNSLPPA Trigger: GGCTGGGGGTAAAGAGTTCTTGGAAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGCTGCCGTCAGCCAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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| CDS CCA 72 bp | CAGTGGATGACAAATTTGGCTGCGAGTCCACTGGATTaGCTGACGGCAGCTTCAGCGACTTCCAAAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QWMTNLAASPLD*LTAASATSKGP Trigger: AGGCCCTTTGGAAGTCGCTGAAGCTGCCGTCAGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 72 bp | ACAGTGGATGACAAATTTGGCTGCGAGTCCACTGGATaGGCTGACGGCAGCTTCAGCGACTTCCAAAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVDDKFGCESTG*ADGSFSDFQRA Trigger: GGCCCTTTGGAAGTCGCTGAAGCTGCCGTCAGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 72 bp | CTGGGGAACGGTGGGAAGGCGACGGATTTAAGCTTCTaGTCCTCTGCTGCAGACAGGCAGTTTTTGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGNGGKATDLSF*SSAADRQFLMV Trigger: GACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGTCGCCTTCCCACCGTTCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 90 bp | TCCACTGGATTGGCTGACGGCAGCTTCAGCGACTTCCAAAGGGCCTaGGGACTTGCGAAGCTCCTTCACTGTTTCCAAGAACTCTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: STGLADGSFSDFQRA*GLAKLLHCFQELFT Trigger: GGTAAAGAGTTCTTGGAAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGCTGCCGTCAGCCAATCCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 90 bp | TTTCTGCCACTGGGGAACGGTGGGAAGGCGACGGATTTAAGCTTCTaGTCCTCTGCTGCAGACAGGCAGTTTTTGATGGTCTCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLPLGNGGKATDLSF*SSAADRQFLMVSSS Trigger: GCTGGAAGAGACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGTCGCCTTCCCACCGTTCCCCAGTGGCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS TCA 72 bp | TGTTCTTCACATTTGTCGGAGCCCCACTGGGGGATGTaGCAGTGGATGACAAATTTGGCTGCGAGTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSHLSEPHWGM*QWMTNLAASPL Trigger: CAGTGGACTCGCAGCCAAATTTGTCATCCACTGTCACATCCCCCAGTGGGGCTCCGACAAATGTGAAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS GCA 72 bp | ATATGGCTGATGTCACTCTGGGTCAGGGATAGCTTCTaGCCCAGAACGAGGCTCTTCGAAGACAAGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IWLMSLWVRDSF*PRTRLFEDKMV Trigger: CACCATCTTGTCTTCGAAGAGCCTCGTTCTGGGGCAGAAGCTATCCCTGACCCAGAGTGACATCAGCCATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS GCA 72 bp | CGGCAGCTTCAGCGACTTCCAAAGGGCCTTGGGACTTaGGAAGCTCCTTCACTGTTTCCAAGAACTCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: RQLQRLPKGLGT*EAPSLFPRTLY Trigger: GTAAAGAGTTCTTGGAAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGCTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS GCA 72 bp | CGGTGGGAAGGCGACGGATTTAAGCTTCTTGTCCTCTaGTGCAGACAGGCAGTTTTTGATGGTCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RWEGDGFKLLVL*CRQAVFDGLFQ Trigger: CTGGAAGAGACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGTCGCCTTCCCACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS GCA 72 bp | TGTCCAGTTTGGCCATCTCCTGCACGTAGATGCCGATaGTCTCGCTGTCGAAGAGCAGGAAGTACACATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPVWPSPARRCR*SRCRRAGSTHS Trigger: AGAATGTGTACTTCCTGCTCTTCGACAGCGAGAGCATCGGCATCTACGTGCAGGAGATGGCCAAACTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 72 bp | ACGGCAGCTTCAGCGACTTCCAAAGGGCCTTGGGACTaGCGAAGCTCCTTCACTGTTTCCAAGAACTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TAASATSKGPWD*RSSFTVSKNSL Trigger: TAAAGAGTTCTTGGAAACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGCTGCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS TCA 72 bp | GAAGCCATCTCCCGGCCCATCCTCCGAGGTGGAATTTaGTGTTCCTTCTTTATCGCTGTCCTTTGCTTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAISRPILRGGI*CSFFIAVLCFR Trigger: TCTAAAGCAAAGGACAGCGATAAAGAAGGAACATCAAATTCCACCTCGGAGGATGGGCCGGGAGATGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
||
| CDS CAA 72 bp | TTAAGCTTCTTGTCCTCTGCTGCAGACAGGCAGTTTTaGATGGTCTCTTCCAGCTGTTCTTCACATTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSFLSSAADRQF*MVSSSCSSHLS Trigger: CGACAAATGTGAAGAACAGCTGGAAGAGACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020283.5 |
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