Pregenerated sensors for MACROH2A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015937Ensembl transcript IDs: ENSMUST00000016081.13, ENSMUST00000045788.9
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGCTTATTTTCCCTAGGTaGGCGGGACTGAGGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQLIFPR*AGLRRT Trigger: TGTCCTCCTCAGTCCCGCTCACCTAGGGAAAATAAG...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGAAGTCAGACACGGTCTaGAAAGCAGTGCTTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQKSDTV*KAVLNK Trigger: CTTGTTAAGCACTGCTTTCCAGACCGTGTCTGACTT...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGTTCTTTCTTTCCAGTTaGAGGTGGGGGACACCGCAT | + |
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Preference number: 2 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLFFLSS*RWGTPH Trigger: ATGCGGTGTCCCCCACCTCCAACTGGAAAGAAAGAA...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGATAAAATCCTCTAGGTaGACTAAGTCAGACACGGTC | + |
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Preference number: 3 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQIKSSR*TKSDTV Trigger: GACCGTGTCTGACTTAGTCAACCTAGAGGATTTTAT...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGATAAAATCCTCTAGGTaGACTAAGTCAGACACGGTC | + |
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Preference number: 3 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLIKSSR*TKSDTV Trigger: GACCGTGTCTGACTTAGTCAACCTAGAGGATTTTAT...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| 3UTR CCA 72 bp | ATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTaGAAAGCAGTGCTTAACAAGGACGATGCCGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: IKSSRLTKSDTV*KAVLNKDDAGY Trigger: ATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGGACTCCGGCCTTGGCTaGCCGGGAGGTCTTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWDSGLG*PGGLGG Trigger: TCCACCAAGACCTCCCGGTCAGCCAAGGCCGGAGTC...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGGGATGTGCCGGGGTGTaGCCCGTCCCTTCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQGCAGV*PVPSCC Trigger: ACAACAAGAAGGGACGGGTCACACCCCGGCACATCC...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGCCCCGCTGGCTATGGTaGCACCCTTTAGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQPRWLW*HPLAAG Trigger: ACCAGCTGCTAAAGGGTGTCACCATAGCCAGCGGGG...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGAGATGGCCTTCAGAATaGGCTGGGCCGCTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQRWPSE*AGPLSA Trigger: AGCAGACAGCGGCCCAGCTCATTCTGAAGGCCATCT...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGGGATGTGCCGGGGTGTaGCCCGTCCCTTCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWGCAGV*PVPSCC Trigger: ACAACAAGAAGGGACGGGTCACACCCCGGCACATCC...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGACAGCTAACAGGATGTaGCGGGGTGTGACCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWTANRM*RGVTRP Trigger: GGGACGGGTCACACCCCGGCACATCCTGTTAGCTGT...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGGCCGCTGCCAATGGATaGGAAGGCGATGGATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQAAANG*EGDGFQ Trigger: CTGAAATCCATCGCCTTCCCATCCATTGGCAGCGGC...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTCAGTGTTTGTCGGGTaGACGACAGCATCACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQSVFVG*TTASLS Trigger: CGACAGTGATGCTGTCGTTCACCCGACAAACACTGA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGTCTGGGATGGAGACTTaGCCTTTTTGGCCGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWSGMET*PFWPAE Trigger: CTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGA...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGGCCACTGGCTTCTTCTaGGATGGAGACTTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQATGFF*DGDLAF Trigger: AAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGC...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCACTGCGCTGGCCGCCTTaGTCACTTCTCCCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPLRWPP*SLLPAS Trigger: AGAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAG...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCGCTGGCCGCCTTaGTCACTTCTCCCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLLRWPP*SLLPAS Trigger: AGAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAG...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGCTTCTACAAACTCCTTaGCGCCCTTCTTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQLLQTP*RPSSPV Trigger: CACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAG...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGATAAGGTTCAGCTTCTaGCCGAGGAAGAGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQIRFSF*PRKRLL Trigger: CAAGAGCCTCTTCCTCGGCCAGAAGCTGAACCTTAT...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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| CDS-3UTR CCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAGCCTTCAGAATGAGCTaGGCCGCTGTCTGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPAFRMS*AAVCFG Trigger: CCCGAAGCAGACAGCGGCCCAGCTCATTCTGAAGGC...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTGGAGGAGGACATCGTaGAGACAAAGTAGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQWRRTS*RQSSWR Trigger: TCTCCAGCTACTTTGTCTCCACGATGTCCTCCTCCA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAAGATGGCCTTCAGAATaGGCTGGGCCGCTGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPRWPSE*AGPLSA Trigger: AGCAGACAGCGGCCCAGCTCATTCTGAAGGCCATCT...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGACCGGGAGGTCTTGGTaGATTTCTTCTTCCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLTGRSW*ISSSRR Trigger: GCGGCGGGAAGAAGAAATCCACCAAGACCTCCCGGT...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGACCGGGAGGTCTTaGTGGATTTCTTCTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLLTGRS*WISSSR Trigger: GCGGGAAGAAGAAATCCACCAAGACCTCCCGGTCAG...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTGGATGGGAAGGCGATaGATTTCAGCTTTCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQWMGRR*ISAFCH Trigger: ATGACAGAAAGCTGAAATCCATCGCCTTCCCATCCA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGAGTTGGCGTCCAGCTTaGCCATTTCCTGCACATAGA | + |
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Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWSWRPA*PFPAHR Trigger: TCTATGTGCAGGAAATGGCCAAGCTGGACGCCAACT...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGATCCTATACTTAGGGTaGCCTTTCTTGATGTACCGA | + |
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Preference number: 4 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQILYLG*PFLMYR Trigger: TCGGTACATCAAGAAAGGCCACCCTAAGTATAGGAT...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAGCCACTGGCTTCTTCTaGGATGGAGACTTGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPATGFF*DGDLAF Trigger: AAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGC...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAGAGGCAATGTCAGCCTaGACAACTTGCAACTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPEAMSA*TTCNFW Trigger: CCAGAAGTTGCAAGTTGTTCAGGCTGACATTGCCTC...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTTCTACAAACTCCTTaGCGCCCTTCTTCTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLLLQTP*RPSSPV Trigger: CACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAG...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAAAGCTGGGCCGCTGTCTaGTTCGGGAACCCGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKSWAAV*FGNPFL Trigger: CAGGAACGGGTTCCCGAAGCAGACAGCGGCCCAGCT...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGTGGCTTCTTCTGGGATaGAGACTTGGCCTTTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLWLLLG*RLGLFG Trigger: GCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCA...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGTGGAGGAGGACATCGTaGAGACAAAGTAGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLWRRTS*RQSSWR Trigger: TCTCCAGCTACTTTGTCTCCACGATGTCCTCCTCCA...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGTTCTTCACATTTGTCTaGACCCCAGACAGGACTATT | + |
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Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWFFTFV*TPDRTI Trigger: AATAGTCCTGTCTGGGGTGCAGACAAATGTGAAGAA...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGTTAGCTCTTCATCATTaGCCACAGCTAACAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: SFQLEVGDTACAGSRDHWLALHH*PQLTGC Trigger: ACATCCTGTTAGCTGTGGCCAATGATGAAGAGCTAA...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGTGTCTTCTTAGCCACTaGCTTCTTCTGGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLCLLSH*LLLGWR Trigger: TCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGACA...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCATGTCTTCTTAGCCACTaGCTTCTTCTGGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPCLLSH*LLLGWR Trigger: TCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGACA...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR TCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAGACTCCGGCCTTGGCTaGCCGGGAGGTCTTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKADSGLG*PGGLGG Trigger: TCCACCAAGACCTCCCGGTCAGCCAAGGCCGGAGTC...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAATCTGGGATGGAGACTTaGCCTTTTTGGCCGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKSGMET*PFWPAE Trigger: CTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGA...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGTGGATGGGAAGGCGATaGATTTCAGCTTTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLWMGRR*ISAFCH Trigger: ATGACAGAAAGCTGAAATCCATCGCCTTCCCATCCA...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGTTCTTCACATTTGTCTaGACCCCAGACAGGACTATT | + |
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Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLFFTFV*TPDRTI Trigger: AATAGTCCTGTCTGGGGTGCAGACAAATGTGAAGAA...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAAGCTGGGCCGCTGTCTaGTTCGGGAACCCGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKASWAAV*FGNPFL Trigger: CAGGAACGGGTTCCCGAAGCAGACAGCGGCCCAGCT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCATTAGCTCTTCATCATTaGCCACAGCTAACAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPLALHH*PQLTGC Trigger: ACATCCTGTTAGCTGTGGCCAATGATGAAGAGCTAA...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAATTGGCAGGCAGGCCATaGCCTGCACTAATAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKLAGRP*PALIAA Trigger: AGCTGCTATTAGTGCAGGCCATGGCCTGCCTGCCAA...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAAGCCGCTGCCAATGGATaGGAAGGCGATGGATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKAAANG*EGDGFQ Trigger: CTGAAATCCATCGCCTTCCCATCCATTGGCAGCGGC...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAATCCTGCCGCTGCCAATaGATGGGAAGGCGATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKSCRCQ*MGRRWI Trigger: AATCCATCGCCTTCCCATCCATTGGCAGCGGCAGGA...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAAAGCCATGTACACAGGTaGCCCCACTCCGATCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKSHVHR*PHSDPI Trigger: TATAGGATCGGAGTGGGGGCACCTGTGTACATGGCT...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAACAGCTAACAGGATGTaGCGGGGTGTGACCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKATANRM*RGVTRP Trigger: GGGACGGGTCACACCCCGGCACATCCTGTTAGCTGT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGGCACATAGATACCTATaGTCTCACTGTCAAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLAHRYL*SHCQKA Trigger: TGCTTTTTGACAGTGAGAGCATAGGTATCTATGTGC...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAACCGGGAGGTCTTGGTaGATTTCTTCTTCCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKATGRSW*ISSSRR Trigger: GCGGCGGGAAGAAGAAATCCACCAAGACCTCCCGGT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAATTGCTCACTTCTCCCTaGTTCTTCTTAGACTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKLLTSP*FFLDFR Trigger: CCGGAAGTCTAAGAAGAAGCAGGGAGAAGTGAGCAA...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCACTGACCGGGAGGTCTTaGTGGATTTCTTCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKALTGRS*WISSSR Trigger: GCGGGAAGAAGAAATCCACCAAGACCTCCCGGTCAG...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCATTGGCAGGCAGGCCATaGCCTGCACTAATAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKALAGRP*PALIAA Trigger: AGCTGCTATTAGTGCAGGCCATGGCCTGCCTGCCAA...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAAGCCATGTACACAGGTaGCCCCACTCCGATCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKASHVHR*PHSDPI Trigger: TATAGGATCGGAGTGGGGGCACCTGTGTACATGGCT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAAACACCCTTTAGCAGCTaGTTTAGCTCTTCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKQCLTRTMPAISANRKTPFSS*FSSSSL Trigger: CAATGATGAAGAGCTAAACCAGCTGCTAAAGGGTGT...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCATGGCTTCTTCTGGGATaGAGACTTGGCCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKAWLLLG*RLGLFG Trigger: GCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCA...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAAGTTGGCGTCCAGCTTaGCCATTTCCTGCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKASWRPA*PFPAHR Trigger: TCTATGTGCAGGAAATGGCCAAGCTGGACGCCAACT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAACACCCTTTAGCAGCTaGTTTAGCTCTTCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKATPFSS*FSSSSL Trigger: CAATGATGAAGAGCTAAACCAGCTGCTAAAGGGTGT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCATTACTGATTTCACTGTaGATAAGGTTCAGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKALLISL*IRFSFW Trigger: CCAGAAGCTGAACCTTATTCACAGTGAAATCAGTAA...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
||
| CDS-3UTR GCA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAGCACATAGATACCTATaGTCTCACTGTCAAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SETIKSSRLTKSDTVWKAAHRYL*SHCQKA Trigger: TGCTTTTTGACAGTGAGAGCATAGGTATCTATGTGC...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTTCTGGGATGGAGACTaGGCCTTTTTGGCCGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQFWDGD*AFLAGG Trigger: TCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGAA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTTCCGGGCCCCTTTCTaGCCTCCTGTCTTCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQFRAPF*PPVFLA Trigger: GGCTAAGAAGACAGGAGGCAAGAAAGGGGCCCGGAA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGTCTGCGCTGGCCGCCTaGCTCACTTCTCCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFQLEVGDTACAGSRDHWSALAA*LTSPCF Trigger: GAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAGA...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGAAGATGACTCCGGCCTaGGCTGACCGGGAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFQLEVGDTACAGSRDHWKMTPA*ADREVL Trigger: CAAGACCTCCCGGTCAGCCAAGGCCGGAGTCATCTT...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS GCA 90 bp | GAGGACAGTGAAGCCGTCTGTAGGCGTGCCCTCCGTCGTACTGTCTaGGCTGGCCGCCTTGCTCACTTCTCCCTGCTTCTTCTTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: EDSEAVCRRALRRTV*AGRLAHFSLLLLRL Trigger: AAGTCTAAGAAGAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAGACAGTACGACGGAGGGCACGCCTACAGACGGCTTCACTGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS CCA 90 bp | CGGGCCCCTTTCTTGCCTCCTGTCTTCTTAGCCACTGGCTTCTTCTaGGATGGAGACTTGGCCTTTTTGGCCGGCGGAGGCGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAPFLPPVFLATGFF*DGDLAFLAGGGVMM Trigger: CATCATCACGCCTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGACAGGAGGCAAGAAAGGGGCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGGGAGACTTGGCCTTTTaGGCCGGCGGAGGCGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLGDLAF*AGGGVM Trigger: CATCACGCCTCCGCCGGCCAAAAAGGCCAAGTCTCC...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAGGAGACTTGGCCTTTTaGGCCGGCGGAGGCGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPGDLAF*AGGGVM Trigger: CATCACGCCTCCGCCGGCCAAAAAGGCCAAGTCTCC...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCATCTGCGCTGGCCGCCTaGCTCACTTCTCCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPSALAA*LTSPCF Trigger: GAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAGA...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS CCA 90 bp | CTTAGACTTCCGGGCCCCTTTCTTGCCTCCTGTCTTCTTAGCCACTaGCTTCTTCTGGGATGGAGACTTGGCCTTTTTGGCCGGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLPGPFLASCLLSH*LLLGWRLGLFGRRR Trigger: CCTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGACAGGAGGCAAGAAAGGGGCCCGGAAGTCTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTTAGGGTGGCCTTTCTaGATGTACCGAAGCATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQLGWPF*MYRSMR Trigger: ACGCATGCTTCGGTACATCAAGAAAGGCCACCCTAA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAGCTGACCGGGAGGTCTaGGTGGATTTCTTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPADREV*VDFFFP Trigger: CGGGAAGAAGAAATCCACCAAGACCTCCCGGTCAGC...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGGCTGACCGGGAGGTCTaGGTGGATTTCTTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLADREV*VDFFFP Trigger: CGGGAAGAAGAAATCCACCAAGACCTCCCGGTCAGC...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCATTCCGGGCCCCTTTCTaGCCTCCTGTCTTCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPFRAPF*PPVFLA Trigger: GGCTAAGAAGACAGGAGGCAAGAAAGGGGCCCGGAA...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGTCAGCATTGGTAGGATaGATTATGGCCTCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQSALVG*IMASTS Trigger: TGAGGTGGAGGCCATAATCAATCCTACCAATGCTGA...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGGCTTCTACAAACTCCTaGCCGCCCTTCTTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFQLEVGDTACAGSRDHWASTNS*PPFFSS Trigger: ACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGC...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGGTCAGCCTGAACAACTaGCAACTTCTGGCCGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFQLEVGDTACAGSRDHWVSLNN*QLLAEE Trigger: TTCCTCGGCCAGAAGTTGCAAGTTGTTCAGGCTGAC...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
||
| CDS CCA 90 bp | GCAGCCATGTACACAGGTGCCCCCACTCCGATCCTATACTTAGGGTaGCCTTTCTTGATGTACCGAAGCATGCGTCCCACAGGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAMYTGAPTPILYLG*PFLMYRSMRPTGKM Trigger: CATCTTCCCTGTGGGACGCATGCTTCGGTACATCAAGAAAGGCCACCCTAAGTATAGGATCGGAGTGGGGGCACCTGTGTACATGGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCTGCCACTCAGGGGAGGGACCGCTGCTCCGCTGCTCTGTGTTAATCAGAGGTCAATGTCAGCATaGGTAGGATTGATTATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPLRGGTAAPLLCVNQRSMSA*VGLIMA Trigger: GGCCATAATCAATCCTACCAATGCTGACATTGACCT...CTGATTAACACAGAGCAGCGGAGCAGCGGTCCCTCCCCTGAGTGGCAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGACCCGTCCCTTCTTGTaGTCTCTTGCTGCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGCTVKQRNAHYKRGFLLTRPFL*SLAALP Trigger: TGGCAATGCAGCAAGAGACAACAAGAAGGGACGGGT...CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TGTACGGTAAAGCAGCGCAACGCACATTACAAACGGGGCTTCCTGCTGCTGCCAGTGACCCGTCCCTTCTaGTTGTCTCTTGCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CTVKQRNAHYKRGFLLLPVTRPF*LSLAAL Trigger: CAATGCAGCAAGAGACAACAAGAAGGGACGGGTCAC...TGGCAGCAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGTGTAGAAGTCAGTGTTaGTCGGGTGAACGACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFQLEVGDTACAGSRDHWCRSQC*SGERQH Trigger: ATGCTGTCGTTCACCCGACAAACACTGACTTCTACA...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
||
| CDS CCA 90 bp | GCTTCGGGAACCCGTTCCTGCCGCTGCCAATGGATGGGAAGGCGATaGATTTCAGCTTTCTGTCATCAGCTAGAGCCAAGCAGTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGTRSCRCQWMGRR*ISAFCHQLEPSSFS Trigger: TGAAAAACTGCTTGGCTCTAGCTGATGACAGAAAGCTGAAATCCATCGCCTTCCCATCCATTGGCAGCGGCAGGAACGGGTTCCCGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCAGTTGGAGGTGGGGGACACCGCATGTGCTGGCTCTAGGGATCACTGGTTTAGCTCTTCATCATaGGCCACAGCTAACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFQLEVGDTACAGSRDHWFSSSS*ATANRM Trigger: CATCCTGTTAGCTGTGGCCAATGATGAAGAGCTAAA...CCAGTGATCCCTAGAGCCAGCACATGCGGTGTCCCCCACCTCCAACTGGAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS GCA 90 bp | GCCCGTTCTTTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTTaGCGCCCTTCTTCTCCAGTGTGTTTCCTACTTCACCACCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSFSGVPEQLLQTP*RPSSPVCFLLHHRC Trigger: ACACCGGTGGTGAAGTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAAAGAACGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAACAGTGGATCACAAACTaGGCAGGCAGGCCATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGKQCLTRTMPAISANRKQWITN*AGRPWP Trigger: AGGCCATGGCCTGCCTGCCAAGTTTGTGATCCACTG...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAAAGATGACTCCGGCCTaGGCTGACCGGGAGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SETIKSSRLTKSDTVWKAKMTPA*ADREVL Trigger: CAAGACCTCCCGGTCAGCCAAGGCCGGAGTCATCTT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAAGTGACCCGTCCCTTCTaGTTGTCTCTTGCTGCATTG | + |
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Preference number: 5 (lower is better) Translates to: SGKQCLTRTMPAISANRKVTRPF*LSLAAL Trigger: CAATGCAGCAAGAGACAACAAGAAGGGACGGGTCAC...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCACAGTGGATCACAAACTaGGCAGGCAGGCCATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SETIKSSRLTKSDTVWKAQWITN*AGRPWP Trigger: AGGCCATGGCCTGCCTGCCAAGTTTGTGATCCACTG...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAACCCGTCCCTTCTTGTaGTCTCTTGCTGCATTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SETIKSSRLTKSDTVWKATRPFL*SLAALP Trigger: TGGCAATGCAGCAAGAGACAACAAGAAGGGACGGGT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAAAGCAGTGCTTAACAAGGACGATGCCGGCTATCAGTGCTAACAGAAAATTTAGCTCTTCATCATaGGCCACAGCTAACAGGATG | + |
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Preference number: 5 (lower is better) Translates to: SGKQCLTRTMPAISANRKFSSSS*ATANRM Trigger: CATCCTGTTAGCTGTGGCCAATGATGAAGAGCTAAA...TTTTCTGTTAGCACTGATAGCCGGCATCGTCCTTGTTAAGCACTGCTTTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAGCTTCTACAAACTCCTaGCCGCCCTTCTTCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SETIKSSRLTKSDTVWKAASTNS*PPFFSS Trigger: ACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGC...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAGCTTCCAATTTTCCCTaGGATCCTCGCTTCTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: SETIKSSRLTKSDTVWKAASNFP*DPRFFA Trigger: AGCGAAGAAGCGAGGATCCAAGGGAAAATTGGAAGC...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS-3UTR CAA 90 bp | AGTGAAACTATAAAATCCTCTAGGTTGACTAAGTCAGACACGGTCTGGAAAGCAAGAAGTTCTTCACATTaGTCTGCACCCCAGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: SETIKSSRLTKSDTVWKARSSSH*SAPQTG Trigger: TCCTGTCTGGGGTGCAGACAAATGTGAAGAACTTCT...TGCTTTCCAGACCGTGTCTGACTTAGTCAACCTAGAGGATTTTATAGTTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | CCGTCTGTAGGCGTGCCCTCCGTCGTACTGTCTGCGCTGGCCGCCTaGCTCACTTCTCCCTGCTTCTTCTTAGACTTCCGGGCCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSVGVPSVVLSALAA*LTSPCFFLDFRAPF Trigger: GAAAGGGGCCCGGAAGTCTAAGAAGAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAGACAGTACGACGGAGGGCACGCCTACAGACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS GCA 72 bp | GAAGCCGTCTGTAGGCGTGCCCTCCGTCGTACTGTCTaGGCTGGCCGCCTTGCTCACTTCTCCCTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EAVCRRALRRTV*AGRLAHFSLLL Trigger: AAGAAGCAGGGAGAAGTGAGCAAGGCGGCCAGCGCAGACAGTACGACGGAGGGCACGCCTACAGACGGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS GCA 72 bp | CTGGAGATGGCCTTCAGAATGAGCTGGGCCGCTGTCTaGTTCGGGAACCCGTTCCTGCCGCTGCCAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: LEMAFRMSWAAV*FGNPFLPLPMD Trigger: ATCCATTGGCAGCGGCAGGAACGGGTTCCCGAAGCAGACAGCGGCCCAGCTCATTCTGAAGGCCATCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 72 bp | CGAAGCATGCGTCCCACAGGGAAGATGACTCCGGCCTaGGCTGACCGGGAGGTCTTGGTGGATTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSMRPTGKMTPA*ADREVLVDFFF Trigger: GAAGAAGAAATCCACCAAGACCTCCCGGTCAGCCAAGGCCGGAGTCATCTTCCCTGTGGGACGCATGCTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | TACACAGGTGCCCCCACTCCGATCCTATACTTAGGGTGGCCTTTCTaGATGTACCGAAGCATGCGTCCCACAGGGAAGATGACTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: YTGAPTPILYLGWPF*MYRSMRPTGKMTPA Trigger: GGCCGGAGTCATCTTCCCTGTGGGACGCATGCTTCGGTACATCAAGAAAGGCCACCCTAAGTATAGGATCGGAGTGGGGGCACCTGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CCA 72 bp | CCGGGCCCCTTTCTTGCCTCCTGTCTTCTTAGCCACTaGCTTCTTCTGGGATGGAGACTTGGCCTTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PGPFLASCLLSH*LLLGWRLGLFG Trigger: GCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGACAGGAGGCAAGAAAGGGGCCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CCA 72 bp | CTGCTTCGGGAACCCGTTCCTGCCGCTGCCAATGGATaGGAAGGCGATGGATTTCAGCTTTCTGTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLREPVPAAANG*EGDGFQLSVIS Trigger: GCTGATGACAGAAAGCTGAAATCCATCGCCTTCCCATCCATTGGCAGCGGCAGGAACGGGTTCCCGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 72 bp | GCCGGCGGAGGCGTGATGATGGCTTCCAATTTTCCCTaGGATCCTCGCTTCTTCGCTAGCAACTCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: AGGGVMMASNFP*DPRFFASNSGW Trigger: CCATCCTGAGTTGCTAGCGAAGAAGCGAGGATCCAAGGGAAAATTGGAAGCCATCATCACGCCTCCGCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 72 bp | GTCTTCTTAGCCACTGGCTTCTTCTGGGATGGAGACTaGGCCTTTTTGGCCGGCGGAGGCGTGATGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: VFLATGFFWDGD*AFLAGGGVMMA Trigger: AGCCATCATCACGCCTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CCA 72 bp | ACCCGTTCCTGCCGCTGCCAATGGATGGGAAGGCGATaGATTTCAGCTTTCTGTCATCAGCTAGAGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRSCRCQWMGRR*ISAFCHQLEPS Trigger: GCTTGGCTCTAGCTGATGACAGAAAGCTGAAATCCATCGCCTTCCCATCCATTGGCAGCGGCAGGAACGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CCA 72 bp | CTGTCTGCTTCGGGAACCCGTTCCTGCCGCTGCCAATaGATGGGAAGGCGATGGATTTCAGCTTTCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSASGTRSCRCQ*MGRRWISAFCH Trigger: ATGACAGAAAGCTGAAATCCATCGCCTTCCCATCCATTGGCAGCGGCAGGAACGGGTTCCCGAAGCAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 72 bp | GCCCCCACTCCGATCCTATACTTAGGGTGGCCTTTCTaGATGTACCGAAGCATGCGTCCCACAGGGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: APTPILYLGWPF*MYRSMRPTGKM Trigger: CATCTTCCCTGTGGGACGCATGCTTCGGTACATCAAGAAAGGCCACCCTAAGTATAGGATCGGAGTGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | GCCTTTTTGGCCGGCGGAGGCGTGATGATGGCTTCCAATTTTCCCTaGGATCCTCGCTTCTTCGCTAGCAACTCAGGATGGATATTCGGC | + |
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Preference number: 6 (lower is better) Translates to: AFLAGGGVMMASNFP*DPRFFASNSGWIFG Trigger: GCCGAATATCCATCCTGAGTTGCTAGCGAAGAAGCGAGGATCCAAGGGAAAATTGGAAGCCATCATCACGCCTCCGCCGGCCAAAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS TCA 72 bp | ACGACAGCATCACTGTCGATCGAGGCAATGTCAGCCTaGACAACTTGCAACTTCTGGCCGAGGAAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TTASLSIEAMSA*TTCNFWPRKRL Trigger: GAGCCTCTTCCTCGGCCAGAAGTTGCAAGTTGTTCAGGCTGACATTGCCTCGATCGACAGTGATGCTGTCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS CCA 72 bp | TACACAGGTGCCCCCACTCCGATCCTATACTTAGGGTaGCCTTTCTTGATGTACCGAAGCATGCGTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: YTGAPTPILYLG*PFLMYRSMRPT Trigger: TGTGGGACGCATGCTTCGGTACATCAAGAAAGGCCACCCTAAGTATAGGATCGGAGTGGGGGCACCTGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 72 bp | GTGACACCCTTTAGCAGCTGGTTTAGCTCTTCATCATaGGCCACAGCTAACAGGATGTGCCGGGGTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: VTPFSSWFSSSS*ATANRMCRGVT Trigger: GGTCACACCCCGGCACATCCTGTTAGCTGTGGCCAATGATGAAGAGCTAAACCAGCTGCTAAAGGGTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 72 bp | GCACCCCAGACAGGACTATTACAGTGGATCACAAACTaGGCAGGCAGGCCATGGCCTGCACTAATAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: APQTGLLQWITN*AGRPWPALIAA Trigger: AGCTGCTATTAGTGCAGGCCATGGCCTGCCTGCCAAGTTTGTGATCCACTGTAATAGTCCTGTCTGGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | GTCTTCTTAGCCACTGGCTTCTTCTGGGATGGAGACTTGGCCTTTTaGGCCGGCGGAGGCGTGATGATGGCTTCCAATTTTCCCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: VFLATGFFWDGDLAF*AGGGVMMASNFPLD Trigger: ATCCAAGGGAAAATTGGAAGCCATCATCACGCCTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | TTGCCTCCTGTCTTCTTAGCCACTGGCTTCTTCTGGGATGGAGACTaGGCCTTTTTGGCCGGCGGAGGCGTGATGATGGCTTCCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: LPPVFLATGFFWDGD*AFLAGGGVMMASNF Trigger: AAAATTGGAAGCCATCATCACGCCTCCGCCGGCCAAAAAGGCCAAGTCTCCATCCCAGAAGAAGCCAGTGGCTAAGAAGACAGGAGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | CATTTGTCTGCACCCCAGACAGGACTATTACAGTGGATCACAAACTaGGCAGGCAGGCCATGGCCTGCACTAATAGCAGCTCCAGCTACC | + |
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Preference number: 6 (lower is better) Translates to: HLSAPQTGLLQWITN*AGRPWPALIAAPAT Trigger: GGTAGCTGGAGCTGCTATTAGTGCAGGCCATGGCCTGCCTGCCAAGTTTGTGATCCACTGTAATAGTCCTGTCTGGGGTGCAGACAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016081.13 ENSMUST00000045788.9 |
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| CDS CAA 90 bp | GGCCCGTTCTTTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTaGCCGCCCTTCTTCTCCAGTGTGTTTCCTACTTCACCACCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPFFFRSSRTASTNS*PPFFSSVFPTSPPV Trigger: CACCGGTGGTGAAGTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAAAGAACGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS CAA 90 bp | TCTCCAGTGTGTTTCCTACTTCACCACCGGTGTAGAAGTCAGTGTTaGTCGGGTGAACGACAGCATCACTGTCGATCGAGGCAATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SPVCFLLHHRCRSQC*SGERQHHCRSRQCQ Trigger: CTGACATTGCCTCGATCGACAGTGATGCTGTCGTTCACCCGACAAACACTGACTTCTACACCGGTGGTGAAGTAGGAAACACACTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS CAA 72 bp | TGTTTCCTACTTCACCACCGGTGTAGAAGTCAGTGTTaGTCGGGTGAACGACAGCATCACTGTCGATCGAGG | + |
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Preference number: 6 (lower is better) Translates to: CFLLHHRCRSQC*SGERQHHCRSR Trigger: CCTCGATCGACAGTGATGCTGTCGTTCACCCGACAAACACTGACTTCTACACCGGTGGTGAAGTAGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS CAA 90 bp | GGCCCGTTCTTTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTaGCCGCCCTTCTTCTCCAGTGTGTTTCCTAGGTCATCTTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPFFFRSSRTASTNS*PPFFSSVFPRSSLR Trigger: CCTTAAAGATGACCTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAAAGAACGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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| CDS TCA 72 bp | TCCACCTCAAAGCCGGCTAAATTACTGATTTCACTGTaGATAAGGTTCAGCTTCTGGCCGAGGAAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: STSKPAKLLISL*IRFSFWPRKRL Trigger: GAGCCTCTTCCTCGGCCAGAAGCTGAACCTTATTCACAGTGAAATCAGTAATTTAGCCGGCTTTGAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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| CDS GCA 72 bp | TTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTTaGCGCCCTTCTTCTCCAGTGTGTTTCCTAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: FSGVPEQLLQTP*RPSSPVCFLGH Trigger: ATGACCTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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| CDS GCA 72 bp | TTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTTaGCGCCCTTCTTCTCCAGTGTGTTTCCTACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FSGVPEQLLQTP*RPSSPVCFLLH Trigger: GTGAAGTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS CAA 72 bp | TTTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTaGCCGCCCTTCTTCTCCAGTGTGTTTCCTAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: FFRSSRTASTNS*PPFFSSVFPRS Trigger: TGACCTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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| CDS CAA 72 bp | TTTTTCCGGAGTTCCAGAACAGCTTCTACAAACTCCTaGCCGCCCTTCTTCTCCAGTGTGTTTCCTACTTCA | + |
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Preference number: 6 (lower is better) Translates to: FFRSSRTASTNS*PPFFSSVFPTS Trigger: TGAAGTAGGAAACACACTGGAGAAGAAGGGCGGCAAGGAGTTTGTAGAAGCTGTTCTGGAACTCCGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045788.9 |
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| CDS CAA 72 bp | GTGTTTCCTAGGTCATCTTTAAGGTCAATGTCAGCATaGGTAGGATTGATTATGGCCTCCACCTCAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: VFPRSSLRSMSA*VGLIMASTSKP Trigger: CGGCTTTGAGGTGGAGGCCATAATCAATCCTACCAATGCTGACATTGACCTTAAAGATGACCTAGGAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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| CDS CAA 90 bp | TTCTCCAGTGTGTTTCCTAGGTCATCTTTAAGGTCAATGTCAGCATaGGTAGGATTGATTATGGCCTCCACCTCAAAGCCGGCTAAATTA | + |
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Preference number: 6 (lower is better) Translates to: FSSVFPRSSLRSMSA*VGLIMASTSKPAKL Trigger: TAATTTAGCCGGCTTTGAGGTGGAGGCCATAATCAATCCTACCAATGCTGACATTGACCTTAAAGATGACCTAGGAAACACACTGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016081.13 |
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