Pregenerated sensors for MACROD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068205Ensembl transcript IDs: ENSMUST00000043836.8, ENSMUST00000078027.12, ENSMUST00000110061.2, ENSMUST00000110062.8, ENSMUST00000110063.8, ENSMUST00000110064.8, ENSMUST00000110067.8, ENSMUST00000156619.2
Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TTTAGATCCCCAAGAGGCAGTGGGAGACCTAGGATTATTCTGGGATaGATAGTTGGGAGGATGCCCAGCCTCCTCTGGTCCTCATTGTTT | + |
Preference number: 1 (lower is better) Translates to: FRSPRGSGRPRIILG*IVGRMPSLLWSSLF Trigger: AAACAATGAGGACCAGAGGAGGCTGGGCATCCTCCCAACTATCCATCCCAGAATAATCCTAGGTCTCCCACTGCCTCTTGGGGATCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 90 bp | CAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGATaGCCAAACACAACGGCTGCCATTGGTAATGAGAAAGGTGGCCTG | + |
Preference number: 1 (lower is better) Translates to: QRILSPRFLTYPHTR*PNTTAAIGNEKGGL Trigger: CAGGCCACCTTTCTCATTACCAATGGCAGCCGTTGTGTTTGGTCATCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR CCA 90 bp | ATCCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTaGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCAC | + |
Preference number: 1 (lower is better) Translates to: IPLLPFMTCACLKCV*KWPSSIHVQKASVH Trigger: GTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR CCA 90 bp | TGTGACCCTATAATGGAGGCTGAGTTATACTTCCCCATGGAGTTATaGGGAAATGCCTTTCCAGCATGGTTCTTTTGTCAGGCACTTCAC | + |
Preference number: 1 (lower is better) Translates to: CDPIMEAELYFPMEL*GNAFPAWFFCQALH Trigger: GTGAAGTGCCTGACAAAAGAACCATGCTGGAAAGGCATTTCCCCATAACTCCATGGGGAAGTATAACTCAGCCTCCATTATAGGGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 90 bp | GGCATCCTGGGTGTGAAGAGTGGAGAATCTAGAGGCTGCCAAGTCTaGCCTTCTTCGTTAATGCCTGATTTGAATATTTTGAACTCCTTA | + |
Preference number: 1 (lower is better) Translates to: GILGVKSGESRGCQV*PSSLMPDLNILNSL Trigger: TAAGGAGTTCAAAATATTCAAATCAGGCATTAACGAAGAAGGTCAGACTTGGCAGCCTCTAGATTCTCCACTCTTCACACCCAGGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR GCA 90 bp | GACCTGAAAACTTCCTTCCTGCTGACTAGCTTTCATAATGCTAGGTaGTATACAGACTGGTGGGTGAGAAATTCATCAACAGTATTACCC | + |
Preference number: 1 (lower is better) Translates to: DLKTSFLLTSFHNAR*YTDWWVRNSSTVLP Trigger: GGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATTATGAAAGCTAGTCAGCAGGAAGGAAGTTTTCAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR TCA 90 bp | CTTCTTAAGTCATGTATAGTTCTGGATAAGTTTTGGATGAGTGGATaGGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGACCAGGAA | + |
Preference number: 1 (lower is better) Translates to: LLKSCIVLDKFWMSG*AAKSPLDLALADQE Trigger: TTCCTGGTCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAACTTATCCAGAACTATACATGACTTAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 90 bp | GTTCGAAGGCAACAGTCATTTAAGTGTCATAGTGTGTGGCACAGATaGAAAGAGACAAACAGATTCAGAAGCTGTCCAGCATTTCAAGAC | + |
Preference number: 1 (lower is better) Translates to: VRRQQSFKCHSVWHR*KETNRFRSCPAFQD Trigger: GTCTTGAAATGCTGGACAGCTTCTGAATCTGTTTGTCTCTTTTCATCTGTGCCACACACTATGACACTTAAATGACTGTTGCCTTCGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR GCA 90 bp | TGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATaGCTTCAGTCTGGCCCAGAGCTAACATTTTTATATTTCATTATT | + |
Preference number: 1 (lower is better) Translates to: CAVTGPVNNTSPYLR*LQSGPELTFLYFII Trigger: AATAATGAAATATAAAAATGTTAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 90 bp | CCTCTGTGGGCTAGCACATCTTGGGTCACCATGGATATTCTTTTATaGAGAGTAGAGACTTCAAGTGGAACTTTGAAAACTACAATTGTT | + |
Preference number: 1 (lower is better) Translates to: PLWASTSWVTMDILL*RVETSSGTLKTTIV Trigger: AACAATTGTAGTTTTCAAAGTTCCACTTGAAGTCTCTACTCTTCATAAAAGAATATCCATGGTGACCCAAGATGTGCTAGCCCACAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR GCA 90 bp | ACAGTGGCCATTCATTCTTCTGATGAATGGTTATTTATAGCTTGTTaGCACTATAAGCAAACATGTTTGCATAATTCGCTGGGGAAGACT | + |
Preference number: 1 (lower is better) Translates to: TVAIHSSDEWLFIAC*HYKQTCLHNSLGKT Trigger: AGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCAACAAGCTATAAATAACCATTCATCAGAAGAATGAATGGCCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR TCA 90 bp | GAAGACACAGCATACTTTGGTTACAGGACATACAGAAATCAATCTTaGATTGACCTGAAAACTTCCTTCCTGCTGACTAGCTTTCATAAT | + |
Preference number: 1 (lower is better) Translates to: EDTAYFGYRTYRNQS*IDLKTSFLLTSFHN Trigger: ATTATGAAAGCTAGTCAGCAGGAAGGAAGTTTTCAGGTCAATTCAAGATTGATTTCTGTATGTCCTGTAACCAAAGTATGCTGTGTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCGGGGCCTCCCACAGATaGAGGGAGCTTGCTTGCTTT | + |
Preference number: 2 (lower is better) Translates to: PPIALHDMCLSEVCLEMAGASHR*RELACF Trigger: AAAGCAAGCAAGCTCCCTCCATCTGTGGGAGGCCCC...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | CCAGTGAACAACACATCTCCTTATCTGAGATGCCTTCAGTCTGGCCCAGAGCTAGGGGCCTCCCACAGATaGAGGGAGCTTGCTTGCTTT | + |
Preference number: 2 (lower is better) Translates to: PVNNTSPYLRCLQSGPELGASHR*RELACF Trigger: AAAGCAAGCAAGCTCCCTCCATCTGTGGGAGGCCCC...TAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCTCTGGGATGGATAGTTaGGAGGATGCCCAGCCTCCT | + |
Preference number: 2 (lower is better) Translates to: PPIALHDMCLSEVCLEMASGMDS*EDAQPP Trigger: AGGAGGCTGGGCATCCTCCCAACTATCCATCCCAGA...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | CTCAAGGTACTACTGCCAAAGACTGTGCCCTCTGCCATGCTGGACTATAACATCAGCTGCCACCATTCATaGAGGCAAAGTACTGCGCTG | + |
Preference number: 2 (lower is better) Translates to: LKVLLPKTVPSAMLDYNISCHHS*RQSTAL Trigger: CAGCGCAGTACTTTGCCTTCATGAATGGTGGCAGCT...GATGTTATAGTCCAGCATGGCAGAGGGCACAGTCTTTGGCAGTAGTACCTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCTGTGGATTATACCAGTaGTGGGCATGGCAGCTCTTG | + |
Preference number: 2 (lower is better) Translates to: PPIALHDMCLSEVCLEMACGLYQ*WAWQLL Trigger: CAAGAGCTGCCATGCCCATCACTGGTATAATCCACA...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCAATCAGCCCCAAAAATaGACACACAGGGCATCCTGG | + |
Preference number: 2 (lower is better) Translates to: TACAVTGPVNNTSPYLRCNQPQK*THRASW Trigger: CCAGGATGCCCTGTGTGTTCATTTTTGGGGCTGATT...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR CAA 90 bp | CATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATaGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCC | + |
Preference number: 2 (lower is better) Translates to: HSCAESISPLPTCTA*YSLCSDRASEQHIS Trigger: GGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | TGTCTCCCACCCTTCTTGTCTGTTTGCCTTCAGGAAGTTCACTCTCTCGCCCACGGCCTCTTTTCCTATTaGCCAAGCTGTAAGACTTTC | + |
Preference number: 2 (lower is better) Translates to: CLPPFLSVCLQEVHSLAHGLFSY*PSCKTF Trigger: GAAAGTCTTACAGCTTGGGCAATAGGAAAAGAGGCC...GTGGGCGAGAGAGTGAACTTCCTGAAGGCAAACAGACAAGAAGGGTGGGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATTCCCCATGGAGTTATaGGGAAATGCCTTTCCAGCA | + |
Preference number: 2 (lower is better) Translates to: PHVLHCTACAVTGPVNNTFPMEL*GNAFPA Trigger: TGCTGGAAAGGCATTTCCCCATAACTCCATGGGGAA...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCGGGCATGGCAGCTCTTaGAATTTAGCCTGCCAGTTT | + |
Preference number: 2 (lower is better) Translates to: LYANVTNNRASFLPSPYCGHGSS*NLACQF Trigger: AAACTGGCAGGCTAAATTTCAAGAGCTGCCATGCCC...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCAATCAGCCCCAAAAATaGACACACAGGGCATCCTGG | + |
Preference number: 2 (lower is better) Translates to: LYANVTNNRASFLPSPYCNQPQK*THRASW Trigger: CCAGGATGCCCTGTGTGTTCATTTTTGGGGCTGATT...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCCCCAGGGCCAGGCCTTaGCATGCTGAGGGCTGTCAT | + |
Preference number: 2 (lower is better) Translates to: LESQMKQDTPFDLNDSNTPRARP*HAEGCH Trigger: ATGACAGCCCTCAGCATGGCAAGGCCTGGCCCTGGG...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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3UTR-3UTR GCA 90 bp | CCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCAACTTCCCACATGTACTaGATTGTACAGCCTGTGCAG | + |
Preference number: 2 (lower is better) Translates to: PLLPFMTCACLKCVWKWPTSHMY*IVQPVQ Trigger: CTGCACAGGCTGTACAATGCAGTACATGTGGGAAGT...TGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | TCCCAAAAGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGGGCAAAGTACTGCGCTaGATGTTTAAGACTGATGGC | + |
Preference number: 2 (lower is better) Translates to: SQKQQIAAISRLLPRTRWGKVLR*MFKTDG Trigger: GCCATCAGTCTTAAACATCCAGCGCAGTACTTTGCC...CCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCTTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGAAGTGTGAACCTCTGTaGGCTAGCACATCTTGGGTC | + |
Preference number: 2 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMKCEPL*ASTSWV Trigger: GACCCAAGATGTGCTAGCCCACAGAGGTTCACACTT...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACAAGTAGGGTGTTAAGATaGTATGCAAAAGACACGACC | + |
Preference number: 2 (lower is better) Translates to: PHVLHCTACAVTGPVNNTSRVLR*YAKDTT Trigger: GGTCGTGTCTTTTGCATATCATCTTAACACCCTACT...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCAAACCAAGGAAGCAGTaGTTGAAATCAGCCCCAAAA | + |
Preference number: 2 (lower is better) Translates to: TACAVTGPVNNTSPYLRCKPRKQ*LKSAPK Trigger: TTTTGGGGCTGATTTCAAGCACTGCTTCCTTGGTTT...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | TGCCCAGCCTCCTCTGGTCCTCATTGTTTGAGCTACCACTGTTCCACTGGCTTCAAGACAGAAATGATATaGACTGAGTGCCTGAAAGAT | + |
Preference number: 2 (lower is better) Translates to: CPASSGPHCLSYHCSTGFKTEMI*TECLKD Trigger: ATCTTTCAGGCACTCAGTCCATATCATTTCTGTCTT...GAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCAGTTATACTTCCCCATaGAGTTATGGGGAAATGCCT | + |
Preference number: 2 (lower is better) Translates to: TACAVTGPVNNTSPYLRCSYTSP*SYGEMP Trigger: AGGCATTTCCCCATAACTCCATGGGGAAGTATAACT...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | TACAGTTTCCAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGATATGGACTGAGTGCCTaGAAGATGCTAAGCATGGGG | + |
Preference number: 2 (lower is better) Translates to: YSFQRILSPRFLTYPHTRYGLSA*KMLSMG Trigger: CCCCATGCTTAGCATCTTTCAGGCACTCAGTCCATA...TCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTGGAAACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | TACAGTTTCCAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGAACCATGGCCCTAGGGTaGGACATGGATAAAAGACAG | + |
Preference number: 2 (lower is better) Translates to: YSFQRILSPRFLTYPHTRTMALG*DMDKRQ Trigger: CTGTCTTTTATCCATGTCTCACCCTAGGGCCATGGT...TCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTGGAAACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | TCCCAAAAGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGCCAAAAGCAACAGATTaGTGCCATTTCTCGTTTGCT | + |
Preference number: 2 (lower is better) Translates to: SQKQQIAAISRLLPRTRWPKATD*CHFSFA Trigger: AGCAAACGAGAAATGGCAGCAATCTGTTGCTTTTGG...CCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCTTTTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR GCA 90 bp | ATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCCCTTCATGACATGTGCCTGATGATATGGACTGAGTaGCTGAAAGATGCTAAGCAT | + |
Preference number: 2 (lower is better) Translates to: ITGLVSSHPPIALHDMCLMIWTE*LKDAKH Trigger: ATGCTTAGCATCTTTCAGGCACTCAGTCCATATCAT...CAGGCACATGTCATGAAGGGCAATAGGGGGATGGGAGGAAACTAGCCCTGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGGGAGTTATGGGGAAATaGCTTTCCAGCATGGTTCTT | + |
Preference number: 2 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVGVMGK*LSSMVL Trigger: AAGAACCATGCTGGAAAGGCATTTCCCCATAACTCC...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | AGGTCAGTGTTAGTTAGACACGCAACAAAACTGCATGTGTCTCCCACCCTTCTTGGCAAAGTACTGCGCTaGATGTTTAAGACTGATGGC | + |
Preference number: 2 (lower is better) Translates to: RSVLVRHATKLHVSPTLLGKVLR*MFKTDG Trigger: GCCATCAGTCTTAAACATCCAGCGCAGTACTTTGCC...AAGAAGGGTGGGAGACACATGCAGTTTTGTTGCGTGTCTAACTAACACTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | TCCCTAATGATGGTTCTGTCAGGGATTTGGTCATGGTTCAAACTAGACAAAAACAGCTGCCACCATTCATaGAGGCAAAGTACTGCGCTG | + |
Preference number: 2 (lower is better) Translates to: SLMMVLSGIWSWFKLDKNSCHHS*RQSTAL Trigger: CAGCGCAGTACTTTGCCTTCATGAATGGTGGCAGCT...GTTTTTGTCTAGTTTGAACCATGACCAAATCCCTGACAGAACCATCATTAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | CTCAAGGTACTACTGCCAAAGACTGTGCCCTCTGCCATGCTGGACTATAACATCATACAGACTGGTGGGTaGGAAATTCATCAACAGTAT | + |
Preference number: 2 (lower is better) Translates to: LKVLLPKTVPSAMLDYNIIQTGG*EIHQQY Trigger: ATACTGTTGATGAATTTCTCACCCACCAGTCTGTAT...GATGTTATAGTCCAGCATGGCAGAGGGCACAGTCTTTGGCAGTAGTACCTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCAGGCCTTGCCATGCTaGGGGCTGTCATTTAGCTTC | + |
Preference number: 2 (lower is better) Translates to: STGKGQTSKLDEILIKWYQALPC*GLSFSF Trigger: GAAGCTAAATGACAGCCCTCAGCATGGCAAGGCCTG...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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3UTR-3UTR TCA 90 bp | CCAGTGAACAACACATCTCCTTATCTGAGATGCCTTCAGTCTGGCCCAGAGCTAGGTGCTTGTAAAATATaGAGATGGCAGGAAACATTG | + |
Preference number: 2 (lower is better) Translates to: PVNNTSPYLRCLQSGPELGACKI*RWQETL Trigger: CAATGTTTCCTGCCATCTTCATATTTTACAAGCACC...TAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | TACAGTTTCCAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGAAGGATTATTCTGGGATaGATAGTTGGGAGGATGCCC | + |
Preference number: 2 (lower is better) Translates to: YSFQRILSPRFLTYPHTRRIILG*IVGRMP Trigger: GGGCATCCTCCCAACTATCCATCCCAGAATAATCCT...TCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTGGAAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | TACAGTTTCCAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGATTCCCCATGGAGTTATaGGGAAATGCCTTTCCAGCA | + |
Preference number: 2 (lower is better) Translates to: YSFQRILSPRFLTYPHTRFPMEL*GNAFPA Trigger: TGCTGGAAAGGCATTTCCCCATAACTCCATGGGGAA...TCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTGGAAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGCTTCCAAGTGTTATCTaGGGTTTGTACCCATTTTCT | + |
Preference number: 2 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVLPSVI*GLYPFS Trigger: AGAAAATGGGTACAAACCTCAGATAACACTTGGAAG...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | TCCCTAATGATGGTTCTGTCAGGGATTTGGTCATGGTTCAAACTAGACAAAAACCTGCCATTTCTCGTTTaGTCCCCAGAACTAGGTGGT | + |
Preference number: 2 (lower is better) Translates to: SLMMVLSGIWSWFKLDKNLPFLV*SPELGG Trigger: ACCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAG...GTTTTTGTCTAGTTTGAACCATGACCAAATCCCTGACAGAACCATCATTAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR GCA 90 bp | CCAGTGAACAACACATCTCCTTATCTGAGATGCCTTCAGTCTGGCCCAGAGCTATTAAAAGGTAACATATaGAGAGGTGTGGTTTGCTAC | + |
Preference number: 2 (lower is better) Translates to: PVNNTSPYLRCLQSGPELLKGNI*RGVVCY Trigger: GTAGCAAACCACACCTCTGCATATGTTACCTTTTAA...TAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CCA 90 bp | AGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGTAAGATCTGTTACCCTCAATCTTaGTCAAAGAAGCTTCTCTGT | + |
Preference number: 2 (lower is better) Translates to: SNRLLPFLVCSPELGGKICYPQS*SKKLLC Trigger: ACAGAGAAGCTTCTTTGACCAAGATTGAGGGTAACA...GATCTTACCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR TCA 90 bp | CAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGGAGTATGGACTGAGTGCCTaGAAGATGCTAAGCATGGGG | + |
Preference number: 2 (lower is better) Translates to: QETLKLSIWVVSLDYLEEYGLSA*KMLSMG Trigger: CCCCATGCTTAGCATCTTTCAGGCACTCAGTCCATA...CTCCTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR TCA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCGGGCATGGCAGCTCTTaGAATTTAGCCTGCCAGTTT | + |
Preference number: 2 (lower is better) Translates to: LESQMKQDTPFDLNDSNTGHGSS*NLACQF Trigger: AAACTGGCAGGCTAAATTTCAAGAGCTGCCATGCCC...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR TCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGCTGGTCCTCATTGTTTaGGCTACCACTGTTCCACTG | + |
Preference number: 2 (lower is better) Translates to: WQETLKLSIWVVSLDYLELVLIV*ATTVPL Trigger: CAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAG...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR TCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTTATCCCCACACAAGATaGCCAAACACAACGGCTGCC | + |
Preference number: 2 (lower is better) Translates to: HSALTNIVRRQQSFKCHSYPHTR*PNTTAA Trigger: GGCAGCCGTTGTGTTTGGTCATCTTGTGTGGGGATA...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR GCA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGATGGAGGGAGCTTGCTTaGTTTTTCATTTTTCTTGTC | + |
Preference number: 2 (lower is better) Translates to: VLDEWMSCQITLGFGISRWRELA*FFIFLV Trigger: GACAAGAAAAATGAAAAAGCAAGCAAGCTCCCTCCA...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR GCA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCTGCAGAGGTGTGGTTTaGTACTTACTTTATTATACC | + |
Preference number: 2 (lower is better) Translates to: LYANVTNNRASFLPSPYCCRGVV*YLLYYT Trigger: GGTATAATAAAGTAAGTAGCAAACCACACCTCTGCA...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR GCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGTGCAGAGGTGTGGTTTaGTACTTACTTTATTATACC | + |
Preference number: 2 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVCRGVV*YLLYYT Trigger: GGTATAATAAAGTAAGTAGCAAACCACACCTCTGCA...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGCATCTTGGGTCACCATaGATATTCTTTTATGAAGAG | + |
Preference number: 2 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVHLGSP*IFFYEE Trigger: CTCTTCATAAAAGAATATCCATGGTGACCCAAGATG...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CCA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTATTGAAGCTATCTATCTaGGTGGTATCCTTAGATTAT | + |
Preference number: 2 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLLKLSI*VVSLDY Trigger: ATAATCTAAGGATACCACCCAGATAGATAGCTTCAA...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR TCA 90 bp | AATAGATTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAGGGCATCCTGGGTGTaGAGAGTGGAGAATCTAGAG | + |
Preference number: 2 (lower is better) Translates to: NRLESQMKQDTPFDLNDSRASWV*RVENLE Trigger: CTCTAGATTCTCCACTCTTCACACCCAGGATGCCCT...ACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAATCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | TGCCACTATAAGCAAACATGTTTGCATAATTCGCTGGGGAAGACTAAAGCAAAGAAAGCAACAGATTGCTaGCATTTCTCGTTTGCTCCC | + |
Preference number: 2 (lower is better) Translates to: CHYKQTCLHNSLGKTKAKKATDC*HFSFAP Trigger: GGGAGCAAACGAGAAATGGCAGCAATCTGTTGCTTT...CTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR GCA 90 bp | CTGAAAACTTCCTTCCTGCTGACTAGCTTTCATAATGCTAGGTGCTATACAGACGGAAATGGTAAAGACTaGCTCCCAAAAGCAACAGAT | + |
Preference number: 2 (lower is better) Translates to: LKTSFLLTSFHNARCYTDGNGKD*LPKATD Trigger: ATCTGTTGCTTTTGGGAGGCAGTCTTTACCATTTCC...GTCTGTATAGCACCTAGCATTATGAAAGCTAGTCAGCAGGAAGGAAGTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | AATGCTAGGTGCTATACAGACTGGTGGGTGAGAAATTCATCAACAGTATTACCCAGGTGCTATACAGACTaGTGGGTGAGAAATTCATCA | + |
Preference number: 2 (lower is better) Translates to: NARCYTDWWVRNSSTVLPRCYTD*WVRNSS Trigger: TGATGAATTTCTCACCCACCAGTCTGTATAGCACCT...GGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | AAAAAGAGAGAAAGCCCATTTTCTAAGACTGAGCATACTTCACAGTGGCCATTCATGGAATGTCCCCCATaGGCATATGAGATTGAACAC | + |
Preference number: 2 (lower is better) Translates to: KKRESPFSKTEHTSQWPFMECPP*AYEIEH Trigger: GTGTTCAATCTCATATGCCCATGGGGGACATTCCAT...GAATGGCCACTGTGAAGTATGCTCAGTCTTAGAAAATGGGCTTTCTCTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR CCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGAATGAGCAAAAGCCATaGGGAAACTTTATGAAATTC | + |
Preference number: 2 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVNEQKP*GNFMKF Trigger: GAATTTCATAAAGTTTCCCCATGGCTTTTGCTCATT...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | AGCTTCTCTGTGCAAAAGACAGGAGTGATACATAAGCTTGTAACTGGCCAAAGTTGGAGAGGAATATTGTaGAAAGCTATCTCTAGACGT | + |
Preference number: 2 (lower is better) Translates to: SFSVQKTGVIHKLVTGQSWRGIL*KAISRR Trigger: ACGTCTAGAGATAGCTTTTCACAATATTCCTCTCCA...ACTTTGGCCAGTTACAAGCTTATGTATCACTCCTGTCTTTTGCACAGAGAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | CTGAAAACTTCCTTCCTGCTGACTAGCTTTCATAATGCTAGGTGCTATACAGACGAAACTCTCAGTGCTTaGTATGGAATACTTGTCTCT | + |
Preference number: 2 (lower is better) Translates to: LKTSFLLTSFHNARCYTDETLSA*YGILVS Trigger: AGAGACAAGTATTCCATATCAAGCACTGAGAGTTTC...GTCTGTATAGCACCTAGCATTATGAAAGCTAGTCAGCAGGAAGGAAGTTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR TCA 90 bp | GATGAGATACTTATAAAGTGGTATCATCCCACTGTTAACTTTAGATATCCTCTCACCATGGCCCTAGGGTaGGACATGGATAAAAGACAG | + |
Preference number: 2 (lower is better) Translates to: DEILIKWYHPTVNFRYPLTMALG*DMDKRQ Trigger: CTGTCTTTTATCCATGTCTCACCCTAGGGCCATGGT...GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | GATGAGATACTTATAAAGTGGTATCATCCCACTGTTAACTTTAGATATCCTCTCTGTGGATTATACCAGTaGTGGGCATGGCAGCTCTTG | + |
Preference number: 2 (lower is better) Translates to: DEILIKWYHPTVNFRYPLCGLYQ*WAWQLL Trigger: CAAGAGCTGCCATGCCCATCACTGGTATAATCCACA...GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTGCCCTTCATGACATGTaGCTGTCTGAAGTGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: HSALTNIVRRQQSFKCHSALHDM*LSEVCL Trigger: CAAACACACTTCAGACAGGCACATGTCATGAAGGGC...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | CTTAAACGGGACATCAATATCAACATCCCCAACTCAAGGCTCGGGAAATACCACTTAGGGAAAGTGAGATaGGGAGTTGAGAATAAATAT | + |
Preference number: 2 (lower is better) Translates to: LKRDININIPNSRLGKYHLGKVR*GVENKY Trigger: ATATTTATTCTCAACTCCCCATCTCACTTTCCCTAA...GTGGTATTTCCCGAGCCTTGAGTTGGGGATGTTGATATTGATGTCCCGTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGAGTTCTTTCTTATTCATaGAACAAACTGTCCTATGAC | + |
Preference number: 2 (lower is better) Translates to: VLDEWMSCQITLGFGISRVLSYS*NKLSYD Trigger: GTCATAGGACAGTTTGTTCCATGAATAAGAAAGAAC...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | GATGAGATACTTATAAAGTGGTATCATCCCACTGTTAACTTTAGATATCCTCTCAAGTGTGAACCTCTGTaGGCTAGCACATCTTGGGTC | + |
Preference number: 2 (lower is better) Translates to: DEILIKWYHPTVNFRYPLKCEPL*ASTSWV Trigger: GACCCAAGATGTGCTAGCCCACAGAGGTTCACACTT...GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATAGGATTATTCTGGGATaGATAGTTGGGAGGATGCCC | + |
Preference number: 2 (lower is better) Translates to: TGKGQTSKLDEILIKWYHRIILG*IVGRMP Trigger: GGGCATCCTCCCAACTATCCATCCCAGAATAATCCT...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACGAGATACTTATAAAGTaGTATCATCCCACTGTTAAC | + |
Preference number: 2 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYEILIK*YHPTVN Trigger: GTTAACAGTGGGATGATACCACTTTATAAGTATCTC...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | TGCCACTATAAGCAAACATGTTTGCATAATTCGCTGGGGAAGACTAAAGCAAAGTGGAGAGGAATATTGTaGAAAGCTATCTCTAGACGT | + |
Preference number: 2 (lower is better) Translates to: CHYKQTCLHNSLGKTKAKWRGIL*KAISRR Trigger: ACGTCTAGAGATAGCTTTTCACAATATTCCTCTCCA...CTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATAGTAGGGTGTTAAGATaGTATGCAAAAGACACGACC | + |
Preference number: 2 (lower is better) Translates to: STGKGQTSKLDEILIKWYSRVLR*YAKDTT Trigger: GGTCGTGTCTTTTGCATATCATCTTAACACCCTACT...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCAAACCAAGGAAGCAGTaGTTGAAATCAGCCCCAAAA | + |
Preference number: 2 (lower is better) Translates to: LESQMKQDTPFDLNDSNTKPRKQ*LKSAPK Trigger: TTTTGGGGCTGATTTCAAGCACTGCTTCCTTGGTTT...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTGGAGTTATGGGGAAATaGCTTTCCAGCATGGTTCTT | + |
Preference number: 2 (lower is better) Translates to: HSALTNIVRRQQSFKCHSGVMGK*LSSMVL Trigger: AAGAACCATGCTGGAAAGGCATTTCCCCATAACTCC...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | AAAGCCACACCTTTACATAGGTATGTACTCATCCTTTTGTCTGTATTAGTAAGAGGCAAAGTACTGCGCTaGATGTTTAAGACTGATGGC | + |
Preference number: 2 (lower is better) Translates to: KATPLHRYVLILLSVLVRGKVLR*MFKTDG Trigger: GCCATCAGTCTTAAACATCCAGCGCAGTACTTTGCC...TCTTACTAATACAGACAAAAGGATGAGTACATACCTATGTAAAGGTGTGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | TGCCACTATAAGCAAACATGTTTGCATAATTCGCTGGGGAAGACTAAAGCAAAGTGTTACCCTCAATCTTaGTCAAAGAAGCTTCTCTGT | + |
Preference number: 2 (lower is better) Translates to: CHYKQTCLHNSLGKTKAKCYPQS*SKKLLC Trigger: ACAGAGAAGCTTCTTTGACCAAGATTGAGGGTAACA...CTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CCA 90 bp | AATGCTAGGTGCTATACAGACTGGTGGGTGAGAAATTCATCAACAGTATTACCCAGACACAGCATACTTTaGTTACAGGACATACAGAAA | + |
Preference number: 2 (lower is better) Translates to: NARCYTDWWVRNSSTVLPRHSIL*LQDIQK Trigger: TTTCTGTATGTCCTGTAACCAAAGTATGCTGTGTCT...GGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR CAA 90 bp | GATGAATGGTTATTTATAGCTTGTTGCCACTATAAGCAAACATGTTaGCATAATTCGCTGGGGAAGACTAAAGCAAAGCCACACCTTTAC | + |
Preference number: 2 (lower is better) Translates to: DEWLFIACCHYKQTC*HNSLGKTKAKPHLY Trigger: GTAAAGGTGTGGCTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCAACAAGCTATAAATAACCATTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR CAA 90 bp | TTTCTCAAAGCACAGCTGACATGCACCACATACAGAGAAATGTCTTaGCAAACCAAGTGCATCAAGCAGAACTGTATTAATTCACAAAGA | + |
Preference number: 2 (lower is better) Translates to: FLKAQLTCTTYREMS*QTKCIKQNCINSQR Trigger: TCTTTGTGAATTAATACAGTTCTGCTTGATGCACTTGGTTTGCAAAGACATTTCTCTGTATGTGGTGCATGTCAGCTGTGCTTTGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR TCA 90 bp | TCCCTAATGATGGTTCTGTCAGGGATTTGGTCATGGTTCAAACTAGACAAAAACAAAAAGACCAAAGAATaGAAAGCCAGGACTCAGAAT | + |
Preference number: 2 (lower is better) Translates to: SLMMVLSGIWSWFKLDKNKKTKE*KARTQN Trigger: ATTCTGAGTCCTGGCTTTTCATTCTTTGGTCTTTTT...GTTTTTGTCTAGTTTGAACCATGACCAAATCCCTGACAGAACCATCATTAGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR GCA 90 bp | TGCCACTATAAGCAAACATGTTTGCATAATTCGCTGGGGAAGACTAAAGCAAAGATAAGCAAACATGTTTaGATAATTCGCTGGGGAAGA | + |
Preference number: 2 (lower is better) Translates to: CHYKQTCLHNSLGKTKAKISKHV*IIRWGR Trigger: TCTTCCCCAGCGAATTATGCAAACATGTTTGCTTAT...CTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR GCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGTGGAGGGAGCTTGCTTaGTTTTTCATTTTTCTTGTC | + |
Preference number: 2 (lower is better) Translates to: WQETLKLSIWVVSLDYLEWRELA*FFIFLV Trigger: GACAAGAAAAATGAAAAAGCAAGCAAGCTCCCTCCA...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CCA 90 bp | AAAGCCACACCTTTACATAGGTATGTACTCATCCTTTTGTCTGTATTAGTAAGACACCTGATCCCAAATTaGTGCCTCTGTTTTGAGAAG | + |
Preference number: 2 (lower is better) Translates to: KATPLHRYVLILLSVLVRHLIPN*CLCFEK Trigger: CTTCTCAAAACAGAGGCACCAATTTGGGATCAGGTG...TCTTACTAATACAGACAAAAGGATGAGTACATACCTATGTAAAGGTGTGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR TCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTGGCACTTCACAAAAGTaGTGGGTGCTTGTAAAATAT | + |
Preference number: 2 (lower is better) Translates to: HSALTNIVRRQQSFKCHSGTSQK*WVLVKY Trigger: ATATTTTACAAGCACCCATCACTTTTGTGAAGTGCC...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR GCA 90 bp | AAAGCCACACCTTTACATAGGTATGTACTCATCCTTTTGTCTGTATTAGTAAGACTGATCCCAAATTGGTaGCTCTGTTTTGAGAAGTTG | + |
Preference number: 2 (lower is better) Translates to: KATPLHRYVLILLSVLVRLIPNW*LCFEKL Trigger: CAACTTCTCAAAACAGAGGCACCAATTTGGGATCAG...TCTTACTAATACAGACAAAAGGATGAGTACATACCTATGTAAAGGTGTGGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR GCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTATGATATGGACTGAGTaGCTGAAAGATGCTAAGCAT | + |
Preference number: 2 (lower is better) Translates to: HSALTNIVRRQQSFKCHSMIWTE*LKDAKH Trigger: ATGCTTAGCATCTTTCAGGCACTCAGTCCATATCAT...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR GCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATGGTGTTAAGATGATATaGAAAAGACACGACCATGTC | + |
Preference number: 2 (lower is better) Translates to: TGKGQTSKLDEILIKWYHGVKMI*KRHDHV Trigger: GACATGGTCGTGTCTTTTGCATATCATCTTAACACC...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR GCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGTTAAAAGGTAACATATaGAGAGGTGTGGTTTGCTAC | + |
Preference number: 2 (lower is better) Translates to: WQETLKLSIWVVSLDYLELKGNI*RGVVCY Trigger: GTAGCAAACCACACCTCTGCATATGTTACCTTTTAA...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CCA 90 bp | TCCCTAATGATGGTTCTGTCAGGGATTTGGTCATGGTTCAAACTAGACAAAAACTTAGGGAAAGTGAGATaGGGAGTTGAGAATAAATAT | + |
Preference number: 2 (lower is better) Translates to: SLMMVLSGIWSWFKLDKNLGKVR*GVENKY Trigger: ATATTTATTCTCAACTCCCCATCTCACTTTCCCTAA...GTTTTTGTCTAGTTTGAACCATGACCAAATCCCTGACAGAACCATCATTAGGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR CCA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATAAGACAGAAATGATATaGACTGAGTGCCTGAAAGAT | + |
Preference number: 2 (lower is better) Translates to: STGKGQTSKLDEILIKWYKTEMI*TECLKD Trigger: ATCTTTCAGGCACTCAGTCCATATCATTTCTGTCTT...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGGAGATACTTATAAAGTaGTATCATCCCACTGTTAAC | + |
Preference number: 2 (lower is better) Translates to: WQETLKLSIWVVSLDYLEEILIK*YHPTVN Trigger: GTTAACAGTGGGATGATACCACTTTATAAGTATCTC...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR TCA 90 bp | AAAGCCACACCTTTACATAGGTATGTACTCATCCTTTTGTCTGTATTAGTAAGAAAAAAGACCAAAGAATaGAAAGCCAGGACTCAGAAT | + |
Preference number: 2 (lower is better) Translates to: KATPLHRYVLILLSVLVRKKTKE*KARTQN Trigger: ATTCTGAGTCCTGGCTTTTCATTCTTTGGTCTTTTT...TCTTACTAATACAGACAAAAGGATGAGTACATACCTATGTAAAGGTGTGGCTTT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR CCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATGTTCTTTCTTATTCATaGAACAAACTGTCCTATGAC | + |
Preference number: 2 (lower is better) Translates to: TGKGQTSKLDEILIKWYHVLSYS*NKLSYD Trigger: GTCATAGGACAGTTTGTTCCATGAATAAGAAAGAAC...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR GCA 72 bp | GCCGTACGAGCAGGCTATGGGGTTTTAGGGTGGCTCTaGCAGCTGCCTCAAGGTACTACTGCCAAAGACTGT | + |
Preference number: 3 (lower is better) Translates to: AVRAGYGVLGWL*QLPQGTTAKDC Trigger: ACAGTCTTTGGCAGTAGTACCTTGAGGCAGCTGGCAGAGCCACCCTAAAACCCCATAGCCTGCTCGTACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR CCA 72 bp | CCAAGAGGCAGTGGGAGACCTAGGATTATTCTGGGATaGATAGTTGGGAGGATGCCCAGCCTCCTCTGGTCC | + |
Preference number: 3 (lower is better) Translates to: PRGSGRPRIILG*IVGRMPSLLWS Trigger: GGACCAGAGGAGGCTGGGCATCCTCCCAACTATCCATCCCAGAATAATCCTAGGTCTCCCACTGCCTCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CCA 72 bp | TGTAGAGCCGTACGAGCAGGCTATGGGGTTTTAGGGTaGCTCTGCCAGCTGCCTCAAGGTACTACTGCCAAA | + |
Preference number: 3 (lower is better) Translates to: CRAVRAGYGVLG*LCQLPQGTTAK Trigger: TTTGGCAGTAGTACCTTGAGGCAGCTGGCAGAGCCACCCTAAAACCCCATAGCCTGCTCGTACGGCTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR TCA 72 bp | ACAGTATTACCCAGCTGTGAACCCTGCATGCCACCGTaGAAACCTTCCAGGCAAGATGTACCCACCCAGTGG | + |
Preference number: 3 (lower is better) Translates to: TVLPSCEPCMPP*KPSRQDVPTQW Trigger: CCACTGGGTGGGTACATCTTGCCTGGAAGGTTTTCACGGTGGCATGCAGGGTTCACAGCTGGGTAATACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR GCA 72 bp | TTTAGGGTGGCTCTGCCAGCTGCCTCAAGGTACTACTaGCAAAGACTGTGCCCTCTGCCATGCTGGACTATA | + |
Preference number: 3 (lower is better) Translates to: FRVALPAASRYY*QRLCPLPCWTI Trigger: TATAGTCCAGCATGGCAGAGGGCACAGTCTTTGGCAGTAGTACCTTGAGGCAGCTGGCAGAGCCACCCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR GCA 72 bp | CTGCCAGCTGCCTCAAGGTACTACTGCCAAAGACTGTaGCCTCTGCCATGCTGGACTATAACATCTGGTTCT | + |
Preference number: 3 (lower is better) Translates to: LPAASRYYCQRL*PLPCWTITSGS Trigger: AGAACCAGATGTTATAGTCCAGCATGGCAGAGGGCACAGTCTTTGGCAGTAGTACCTTGAGGCAGCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CAA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTGGTCCTCATTGTTaGAGCTACCACTGTTCCACT | + |
Preference number: 3 (lower is better) Translates to: PHVLHCTACAVTGPVNNTSGPHC*SYHCST Trigger: AGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGA...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR GCA 72 bp | AGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTaGAGTGACAGGGCCAGTGAACAACACATCTCCTTA | + |
Preference number: 3 (lower is better) Translates to: SPLPTCTALYSL*SDRASEQHISL Trigger: TAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR GCA 72 bp | CAAAACTGCATGTGTCTCCCACCCTTCTTGTCTGTTTaGCTTCAGGAAGTTCACTCTCTCGCCCACCCTTTT | + |
Preference number: 3 (lower is better) Translates to: QNCMCLPPFLSV*LQEVHSLAHPF Trigger: AAAAGGGTGGGCGAGAGAGTGAACTTCCTGAAGGCAAACAGACAAGAAGGGTGGGAGACACATGCAGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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3UTR-3UTR CAA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCTGGGCATGGCAGCTCTaGAAATTTAGCCTGCCAGTT | + |
Preference number: 3 (lower is better) Translates to: LYANVTNNRASFLPSPYCWAWQL*KFSLPV Trigger: AACTGGCAGGCTAAATTTCAAGAGCTGCCATGCCCA...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR GCA 72 bp | GATAGTCAGCTGCCACCATTCATGAAGGCAAAGTACTaGGCTGGATGTTTAAGACTGATGGCTACAGCCAGT | + |
Preference number: 3 (lower is better) Translates to: DSQLPPFMKAKY*AGCLRLMATAS Trigger: ACTGGCTGTAGCCATCAGTCTTAAACATCCAGCGCAGTACTTTGCCTTCATGAATGGTGGCAGCTGACTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043836.8 ENSMUST00000110061.2 ENSMUST00000110062.8 |
||
3UTR CCA 72 bp | GGTAATGAGAAAGGTGGCCTGGAATTGTCTCAGTTCTaGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACT | + |
Preference number: 3 (lower is better) Translates to: GNEKGGLELSQF*LFLLSQVCLPT Trigger: AGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGACAATTCCAGGCCACCTTTCTCATTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCGCCTGCCAGTTTAGCTaGTCATCATGTTCTTTCTTA | + |
Preference number: 3 (lower is better) Translates to: PPIALHDMCLSEVCLEMAACQFS*SSCSFL Trigger: TAAGAAAGAACATGATGACAAGCTAAACTGGCAGGC...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGGGCATGGCAGCTCTaGAAATTTAGCCTGCCAGTT | + |
Preference number: 3 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYWAWQL*KFSLPV Trigger: AACTGGCAGGCTAAATTTCAAGAGCTGCCATGCCCA...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTATCCAGCATGGTTCTTTaGTCAGGCACTTCACAAAAG | + |
Preference number: 3 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLSSMVL*SGTSQK Trigger: CTTTTGTGAAGTGCCTGACAAAAGAACCATGCTGGA...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | TTCATGAAGGCAAAGTACTGCGCTGGATGTTTAAGACTGATGGCTACAGCCAGTTGTCTCCCACCCTTCTaGTCTGTTTGCCTTCAGGAA | + |
Preference number: 3 (lower is better) Translates to: FMKAKYCAGCLRLMATASCLPPF*SVCLQE Trigger: TTCCTGAAGGCAAACAGACAAGAAGGGTGGGAGACA...ACTGGCTGTAGCCATCAGTCTTAAACATCCAGCGCAGTACTTTGCCTTCATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
||
3UTR-3UTR CAA 90 bp | AGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGTAAGATCGTGTTACCCTCAATCTaGGTCAAAGAAGCTTCTCTG | + |
Preference number: 3 (lower is better) Translates to: SNRLLPFLVCSPELGGKIVLPSI*VKEASL Trigger: CAGAGAAGCTTCTTTGACCAAGATTGAGGGTAACAC...GATCTTACCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CAA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTAGCCTGCCAGTTTAGCTaGTCATCATGTTCTTTCTTA | + |
Preference number: 3 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLACQFS*SSCSFL Trigger: TAAGAAAGAACATGATGACAAGCTAAACTGGCAGGC...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CAA 90 bp | CCAAAAATGAACACACAGGGCATCCTGGGTGTGAAGAGTGGAGAATCTAGAGGCTCTATCCTTCCTCCTTaGTGGATTATACCAGTGATG | + |
Preference number: 3 (lower is better) Translates to: PKMNTQGILGVKSGESRGSILPP*WIIPVM Trigger: CATCACTGGTATAATCCACAAAGGAGGAAGGATAGA...GCCTCTAGATTCTCCACTCTTCACACCCAGGATGCCCTGTGTGTTCATTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 72 bp | CTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGATaGCCAAACACAACGGCTGCCATTGGTAATGAGAAA | + |
Preference number: 3 (lower is better) Translates to: LSPRFLTYPHTR*PNTTAAIGNEK Trigger: TTTCTCATTACCAATGGCAGCCGTTGTGTTTGGTCATCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 72 bp | CAGGAGATTCATATTTTGCCCGACATCACGCAGATCTaGCAGGGAAGAGTCTGGCTCCAGAACACAGTTTTA | + |
Preference number: 3 (lower is better) Translates to: QEIHILPDITQI*QGRVWLQNTVL Trigger: TAAAACTGTGTTCTGGAGCCAGACTCTTCCCTGTCAGATCTGCGTGATGTCGGGCAAAATATGAATCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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3UTR CCA 72 bp | GCTCCAAATGCTCCTAACTTCAAGTGTGAACCTCTGTaGGCTAGCACATCTTGGGTCACCATGGATATTCTT | + |
Preference number: 3 (lower is better) Translates to: APNAPNFKCEPL*ASTSWVTMDIL Trigger: AAGAATATCCATGGTGACCCAAGATGTGCTAGCCCACAGAGGTTCACACTTGAAGTTAGGAGCATTTGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CAA 90 bp | CTCAAGGTACTACTGCCAAAGACTGTGCCCTCTGCCATGCTGGACTATAACATCAACAGAGAAGAGAGGTaGGGAGTATATTACCAAAAC | + |
Preference number: 3 (lower is better) Translates to: LKVLLPKTVPSAMLDYNINREER*GVYYQN Trigger: GTTTTGGTAATATACTCCCAACCTCTCTTCTCTGTT...GATGTTATAGTCCAGCATGGCAGAGGGCACAGTCTTTGGCAGTAGTACCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR-3UTR CAA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATTTAGCTTCAGTTCTTaGTTCCTTTGCTTCATCTTG | + |
Preference number: 3 (lower is better) Translates to: PHVLHCTACAVTGPVNNTFSFSS*FLCFIL Trigger: CAAGATGAAGCAAAGGAACAAAGAACTGAAGCTAAA...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
3UTR-3UTR CAA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTCCAGCATGGTTCTTTaGTCAGGCACTTCACAAAAG | + |
Preference number: 3 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYSSMVL*SGTSQK Trigger: CTTTTGTGAAGTGCCTGACAAAAGAACCATGCTGGA...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR TCA 72 bp | TGGAATGTCCCCCATGGGCATATGAGATTGAACACCTaGTCCCAAATTGGTGCCTCTGTTTTGAGAAGTTGT | + |
Preference number: 3 (lower is better) Translates to: WNVPHGHMRLNT*SQIGASVLRSC Trigger: ACAACTTCTCAAAACAGAGGCACCAATTTGGGATCAGGTGTTCAATCTCATATGCCCATGGGGGACATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR GCA 72 bp | AGAAATAAGGAAGCTGACTCCAGGAGATTCATATTTTaGCCGACATCACGCAGATCTGACAGGGAAGAGTCT | + |
Preference number: 3 (lower is better) Translates to: RNKEADSRRFIF*PTSRRSDREES Trigger: AGACTCTTCCCTGTCAGATCTGCGTGATGTCGGGCAAAATATGAATCTCCTGGAGTCAGCTTCCTTATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
||
3UTR CCA 72 bp | TTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTaGAAATGGCCATCTAGCATTCATGTGCAGAAAGCA | + |
Preference number: 3 (lower is better) Translates to: LPFMTCACLKCV*KWPSSIHVQKA Trigger: TGCTTTCTGCACATGAATGCTAGATGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR-3UTR CAA 90 bp | CCCATTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCATGGAGGGAGCTTGCTaGCTTTTTCATTTTTCTTGT | + |
Preference number: 3 (lower is better) Translates to: PIFYPSSFVDYTSDGHGSMEGAC*LFHFSC Trigger: ACAAGAAAAATGAAAAAGCAAGCAAGCTCCCTCCAT...GCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | CCAGTGAACAACACATCTCCTTATCTGAGATGCCTTCAGTCTGGCCCAGAGCTAGGCCAAACTAGCAAATaGGATGAGATACTTATAAAG | + |
Preference number: 3 (lower is better) Translates to: PVNNTSPYLRCLQSGPELGQTSK*DEILIK Trigger: CTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCC...TAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR TCA 72 bp | CATTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTaGTGGGCATGGCAGCTCTTGAAATTTAGCCTGCCA | + |
Preference number: 3 (lower is better) Translates to: HFLSFLLCGLYQ*WAWQLLKFSLP Trigger: TGGCAGGCTAAATTTCAAGAGCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR GCA 72 bp | ACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATaGCTTCAGTCTGGCCCAGAGCTAACATTTTTATAT | + |
Preference number: 3 (lower is better) Translates to: TGPVNNTSPYLR*LQSGPELTFLY Trigger: ATATAAAAATGTTAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CCA 72 bp | ATAATGGAGGCTGAGTTATACTTCCCCATGGAGTTATaGGGAAATGCCTTTCCAGCATGGTTCTTTTGTCAG | + |
Preference number: 3 (lower is better) Translates to: IMEAELYFPMEL*GNAFPAWFFCQ Trigger: CTGACAAAAGAACCATGCTGGAAAGGCATTTCCCCATAACTCCATGGGGAAGTATAACTCAGCCTCCATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CCA 72 bp | TTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATaGCCATCTAGCATTCATGTGCAGAAAGCATCAGTC | + |
Preference number: 3 (lower is better) Translates to: FMTCACLKCVWK*PSSIHVQKASV Trigger: GACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGAACAAGACACTCCCTTaGATCTCAATGATAGTAACA | + |
Preference number: 3 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVNKTLP*ISMIVT Trigger: TGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTT...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR TCA 72 bp | GCTTTCATAATGCTAGGTGCTATACAGACTGGTGGGTaGGAAATTCATCAACAGTATTACCCAGCTGTGAAC | + |
Preference number: 3 (lower is better) Translates to: AFIMLGAIQTGG*EIHQQYYPAVN Trigger: GTTCACAGCTGGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATTATGAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR GCA 72 bp | ACTTCCTTCCTGCTGACTAGCTTTCATAATGCTAGGTaGTATACAGACTGGTGGGTGAGAAATTCATCAACA | + |
Preference number: 3 (lower is better) Translates to: TSFLLTSFHNAR*YTDWWVRNSST Trigger: TGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATTATGAAAGCTAGTCAGCAGGAAGGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR CCA 72 bp | CTGACTAGCTTTCATAATGCTAGGTGCTATACAGACTaGTGGGTGAGAAATTCATCAACAGTATTACCCAGC | + |
Preference number: 3 (lower is better) Translates to: LTSFHNARCYTD*WVRNSSTVLPS Trigger: GCTGGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATTATGAAAGCTAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR TCA 72 bp | TCATGTATAGTTCTGGATAAGTTTTGGATGAGTGGATaGGCTGCCAAATCACCCTTGGATTTGGCATTAGCA | + |
Preference number: 3 (lower is better) Translates to: SCIVLDKFWMSG*AAKSPLDLALA Trigger: TGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAACTTATCCAGAACTATACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR TCA 72 bp | CAACAGTCATTTAAGTGTCATAGTGTGTGGCACAGATaGAAAGAGACAAACAGATTCAGAAGCTGTCCAGCA | + |
Preference number: 3 (lower is better) Translates to: QQSFKCHSVWHR*KETNRFRSCPA Trigger: TGCTGGACAGCTTCTGAATCTGTTTGTCTCTTTTCATCTGTGCCACACACTATGACACTTAAATGACTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CCA 72 bp | ACTAGCTTTCATAATGCTAGGTGCTATACAGACTGGTaGGTGAGAAATTCATCAACAGTATTACCCAGCTGT | + |
Preference number: 3 (lower is better) Translates to: TSFHNARCYTDW*VRNSSTVLPSC Trigger: ACAGCTGGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATTATGAAAGCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR CCA 72 bp | ATCTGGTTCTCCCTAATGATGGTTCTGTCAGGGATTTaGTCATGGTTCAAACTAGACAAAAACGTGTTTCTG | + |
Preference number: 3 (lower is better) Translates to: IWFSLMMVLSGI*SWFKLDKNVFL Trigger: CAGAAACACGTTTTTGTCTAGTTTGAACCATGACCAAATCCCTGACAGAACCATCATTAGGGAGAACCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR CAA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTTCTGGTCCTCATTGTTaGAGCTACCACTGTTCCACT | + |
Preference number: 3 (lower is better) Translates to: HSALTNIVRRQQSFKCHSSGPHC*SYHCST Trigger: AGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGA...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCTCTATCCTTCCTCCTTaGTGGATTATACCAGTGATG | + |
Preference number: 3 (lower is better) Translates to: LESQMKQDTPFDLNDSNTSILPP*WIIPVM Trigger: CATCACTGGTATAATCCACAAAGGAGGAAGGATAGA...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTAGATGGCAGGAAACATaGAAGCTATCTATCTGGGTG | + |
Preference number: 3 (lower is better) Translates to: HSALTNIVRRQQSFKCHSRWQET*KLSIWV Trigger: CACCCAGATAGATAGCTTCAATGTTTCCTGCCATCT...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR TCA 72 bp | AGGCACTTCACAAAAGTGATGGGTGCTTGTAAAATATaGAGATGGCAGGAAACATTGAAGCTATCTATCTGG | + |
Preference number: 3 (lower is better) Translates to: RHFTKVMGACKI*RWQETLKLSIW Trigger: CCAGATAGATAGCTTCAATGTTTCCTGCCATCTTCATATTTTACAAGCACCCATCACTTTTGTGAAGTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | AAAGCCACACCTTTACATAGGTATGTACTCATCCTTTTGTCTGTATTAGTAAGAGTGTTACCCTCAATCTaGGTCAAAGAAGCTTCTCTG | + |
Preference number: 3 (lower is better) Translates to: KATPLHRYVLILLSVLVRVLPSI*VKEASL Trigger: CAGAGAAGCTTCTTTGACCAAGATTGAGGGTAACAC...TCTTACTAATACAGACAAAAGGATGAGTACATACCTATGTAAAGGTGTGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR TCA 72 bp | GCTAGCACATCTTGGGTCACCATGGATATTCTTTTATaGAGAGTAGAGACTTCAAGTGGAACTTTGAAAACT | + |
Preference number: 3 (lower is better) Translates to: ASTSWVTMDILL*RVETSSGTLKT Trigger: AGTTTTCAAAGTTCCACTTGAAGTCTCTACTCTTCATAAAAGAATATCCATGGTGACCCAAGATGTGCTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CCA 72 bp | AAATATAGTTATGGTTTGAATATGGAATGTCCCCCATaGGCATATGAGATTGAACACCTGATCCCAAATTGG | + |
Preference number: 3 (lower is better) Translates to: KYSYGLNMECPP*AYEIEHLIPNW Trigger: CCAATTTGGGATCAGGTGTTCAATCTCATATGCCCATGGGGGACATTCCATATTCAAACCATAACTATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR-3UTR CAA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGAACAAGACACTCCCTTaGATCTCAATGATAGTAACA | + |
Preference number: 3 (lower is better) Translates to: WQETLKLSIWVVSLDYLENKTLP*ISMIVT Trigger: TGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTT...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CCA 72 bp | GCATACTTCACAGTGGCCATTCATTCTTCTGATGAATaGTTATTTATAGCTTGTTGCCACTATAAGCAAACA | + |
Preference number: 3 (lower is better) Translates to: AYFTVAIHSSDE*LFIACCHYKQT Trigger: TGTTTGCTTATAGTGGCAACAAGCTATAAATAACCATTCATCAGAAGAATGAATGGCCACTGTGAAGTATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
||
3UTR CCA 72 bp | GGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTaGTATCATCCCACTGTTAACTTTAGATATCCTCTC | + |
Preference number: 3 (lower is better) Translates to: GQTSKLDEILIK*YHPTVNFRYPL Trigger: GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR-3UTR CAA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTATGCAGAGGTGTGGTTaGCTACTTACTTTATTATAC | + |
Preference number: 3 (lower is better) Translates to: HSALTNIVRRQQSFKCHSMQRCG*LLTLLY Trigger: GTATAATAAAGTAAGTAGCAAACCACACCTCTGCAT...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR TCA 72 bp | CAGACTCTTCTCAAGGAGTCTTCAATGAGTCTTTCTTaGTTCAAAATGGACTGGAAAACAAGATCAGATAAA | + |
Preference number: 3 (lower is better) Translates to: QTLLKESSMSLS*FKMDWKTRSDK Trigger: TTTATCTGATCTTGTTTTCCAGTCCATTTTGAATCAAGAAAGACTCATTGAAGACTCCTTGAGAAGAGTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110062.8 |
||
CDS-3UTR TCA 90 bp | TGCCCAGCCTCCTCTGGTCCTCATTGTTTGAGCTACCACTGTTCCACTGGCTTCCCACCTCTAGCAGAGTaGTGTCACCTCTGTAGAGAG | + |
Preference number: 4 (lower is better) Translates to: CPASSGPHCLSYHCSTGFPPLAE*CHLCRE Trigger: CTCTCTACAGAGGTGACATCACTCTGCTAGAGGTGG...GAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | ATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCCCTTCATGACATGTGCCTGGGGCCAGCAGCTCTGTaGATACAGCCATCCACACCT | + |
Preference number: 4 (lower is better) Translates to: ITGLVSSHPPIALHDMCLGPAAL*IQPSTP Trigger: AGGTGTGGATGGCTGTATTCACAGAGCTGCTGGCCC...CAGGCACATGTCATGAAGGGCAATAGGGGGATGGGAGGAAACTAGCCCTGTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR GCA 90 bp | GGGAAGAGTCTGGCTCCAGAACACAGTTTTAAAGAGTGCCATCCTTCTCTCCGGTTCTCACACGCACCCTaGAGAGGAGGATGCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: GKSLAPEHSFKECHPSLRFSHAP*RGGCCS Trigger: GGAGCAGCATCCTCCTCTGCAGGGTGCGTGTGAGAA...CCGGAGAGAAGGATGGCACTCTTTAAAACTGTGTTCTGGAGCCAGACTCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
||
CDS-3UTR CCA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATTTGTCTTCGGAAGCTaGGCTGGGCACAGGGGTGGT | + |
Preference number: 4 (lower is better) Translates to: PHVLHCTACAVTGPVNNTFVFGS*AGHRGG Trigger: ACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAA...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | CCAGTGAACAACACATCTCCTTATCTGAGATGCCTTCAGTCTGGCCCAGAGCTATTTGTCTTCGGAAGCTaGGCTGGGCACAGGGGTGGT | + |
Preference number: 4 (lower is better) Translates to: PVNNTSPYLRCLQSGPELFVFGS*AGHRGG Trigger: ACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAA...TAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCTCCTCAAAAGAAACCTaGGCCCACCTGCTTCTTGGC | + |
Preference number: 4 (lower is better) Translates to: TACAVTGPVNNTSPYLRCSSKET*AHLLLG Trigger: GCCAAGAAGCAGGTGGGCTCAGGTTTCTTTTGAGGA...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR GCA 90 bp | GGGAAGAGTCTGGCTCCAGAACACAGTTTTAAAGAGTGCCATCCTTCTCTCCGGTCCAGTAGCAGAACTTaGACACTTTGGGGTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: GKSLAPEHSFKECHPSLRSSSRT*TLWGPS Trigger: GCTCGGACCCCAAAGTGTGCAAGTTCTGCTACTGGA...CCGGAGAGAAGGATGGCACTCTTTAAAACTGTGTTCTGGAGCCAGACTCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
||
CDS-3UTR CCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCGCCTCGCTGGAACCTTaGCTTTCTGCAAACACAGCA | + |
Preference number: 4 (lower is better) Translates to: TACAVTGPVNNTSPYLRCASLEP*LSANTA Trigger: TGCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGC...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACAAGGCTCTGGCCCTTCTaGATCTTCTTTCATGTCAGC | + |
Preference number: 4 (lower is better) Translates to: PHVLHCTACAVTGPVNNTRLWPF*IFFHVS Trigger: GCTGACATGAAAGAAGATTCAGAAGGGCCAGAGCCT...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR TCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGTGGCCCATCAGGACCTaGAGTGTTTTCTGCCTCGCT | + |
Preference number: 4 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVWPIRT*SVFCLA Trigger: AGCGAGGCAGAAAACACTTCAGGTCCTGATGGGCCA...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
||
CDS-3UTR GCA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGAAACCTGAGCCCACCTaGTTCTTGGCTCTGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMKPEPT*FLALPF Trigger: GAAGGGCAGAGCCAAGAAGCAGGTGGGCTCAGGTTT...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR CCA 90 bp | TGCCCAGCCTCCTCTGGTCCTCATTGTTTGAGCTACCACTGTTCCACTGGCTTCTTCCATAGAGGAGCTTaGGGATTCTGCCTCAGTTTT | + |
Preference number: 4 (lower is better) Translates to: CPASSGPHCLSYHCSTGFFHRGA*GFCLSF Trigger: AAAACTGAGGCAGAATCCCCAAGCTCCTCTATGGAA...GAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR CAA 72 bp | ATAGTTGGGAGGATGCCCAGCCTCCTCTGGTCCTCATaGTTTGAGCTACCACTGTTCCACTGGCTTCTTAAG | + |
Preference number: 4 (lower is better) Translates to: IVGRMPSLLWSS*FELPLFHWLLK Trigger: CTTAAGAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCATCCTCCCAACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR CAA 72 bp | GCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATaGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAA | + |
Preference number: 4 (lower is better) Translates to: AESISPLPTCTA*YSLCSDRASEQ Trigger: TTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | TCCCAAAAGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGAGGTGCTCTCTCCCATaGCATTCTCCACCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: SQKQQIAAISRLLPRTRWRCSLP*HSPPFL Trigger: GAGAAATGGTGGAGAATGTCATGGGAGAGAGCACCT...CCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCTTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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CDS-3UTR TCA 90 bp | CCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCAGCCCTACAGTATGGATaGCATACTTTGCAGGGAGGT | + |
Preference number: 4 (lower is better) Translates to: PLLPFMTCACLKCVWKWPALQYG*HTLQGG Trigger: ACCTCCCTGCAAAGTATGTCATCCATACTGTAGGGC...TGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | CCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCAGGAAGACACAGAAGATaGTTCGATCCACCTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: PLLPFMTCACLKCVWKWPGRHRR*FDPPPG Trigger: ACCAGGAGGTGGATCGAATCATCTTCTGTGTCTTCC...TGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCGCCACATGTGATTTTTaGATGTCCAGTCTCACAGCC | + |
Preference number: 4 (lower is better) Translates to: TACAVTGPVNNTSPYLRCATCDF*MSSLTA Trigger: GGCTGTGAGACTGGACATGCAAAAATCACATGTGGC...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGCCTGCTTCTTGGCTCTaGCCTTCCATTTCTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVPASWL*PSISSA Trigger: TGCGGAAGAAATGGAAGGGCAGAGCCAAGAAGCAGG...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS-3UTR GCA 90 bp | CCAAAAATGAACACACAGGGCATCCTGGGTGTGAAGAGTGGAGAATCTAGAGGCGGAACCTTGGCTTTCTaGAAACACAGCAGGTGCATC | + |
Preference number: 4 (lower is better) Translates to: PKMNTQGILGVKSGESRGGTLAF*KHSRCI Trigger: GATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCC...GCCTCTAGATTCTCCACTCTTCACACCCAGGATGCCCTGTGTGTTCATTTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTATCTGCTTCTTGGCTCTaGCCTTCCATTTCTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLSASWL*PSISSA Trigger: TGCGGAAGAAATGGAAGGGCAGAGCCAAGAAGCAGA...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGGGTGTTGACACCATCTaGTTCTTGGCTCTGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMGVDTI*FLALPF Trigger: GAAGGGCAGAGCCAAGAAGCAGATGGTGTCAACACC...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | AAGAGTCTGGCTCCAGAACACAGTTTTAAAGAGTGCCATCCTTCTCTCCGGCATTGCAGAGGAGGATGCTaGTCCAGTAGCAGAACTTGC | + |
Preference number: 4 (lower is better) Translates to: KSLAPEHSFKECHPSLRHCRGGC*SSSRTC Trigger: GCAAGTTCTGCTACTGGAGCAGCATCCTCCTCTGCA...ATGCCGGAGAGAAGGATGGCACTCTTTAAAACTGTGTTCTGGAGCCAGACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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3UTR CAA 72 bp | ACAAAACTGCATGTGTCTCCCACCCTTCTTGTCTGTTaGCCTTCAGGAAGTTCACTCTCTCGCCCACCCTTT | + |
Preference number: 4 (lower is better) Translates to: TKLHVSPTLLVC*PSGSSLSRPPF Trigger: AAAGGGTGGGCGAGAGAGTGAACTTCCTGAAGGCAAACAGACAAGAAGGGTGGGAGACACATGCAGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
||
CDS-3UTR TCA 90 bp | CCCATTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCGTCAACATCAGGACCTaGAGTGTTTTCTGCCTCGCT | + |
Preference number: 4 (lower is better) Translates to: PIFYPSSFVDYTSDGHGSVNIRT*SVFCLA Trigger: AGCGAGGCAGAAAACACTTCAGGTCCTGATGTTGAC...GCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS-3UTR GCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCTTCTCCACCTTCCTGTaGTTCTTGGTCATCTATCAG | + |
Preference number: 4 (lower is better) Translates to: TACAVTGPVNNTSPYLRCFSTFL*FLVIYQ Trigger: CTGATAGATGACCAAGAAGCACAGGAAGGTGGAGAA...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | ACGAAATGCAGCTGGAGAATTAGAGCAAAGGACCCCCTTTCTTCCATGAACTTGCAGCAGGTGCATCCTTaGCTTGAGCTTCTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: TKCSWRIRAKDPLSSMNLQQVHP*LELLHL Trigger: AAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTG...CAAGTTCATGGAAGAAAGGGGGTCCTTTGCTCTAATTCTCCAGCTGCATTTCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | ATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCCCTTCATGACATGTGCCTGATTGGCCCTACAGTATaGATGACATACTTTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: ITGLVSSHPPIALHDMCLIGPTV*MTYFAG Trigger: CCCTGCAAAGTATGTCATCCATACTGTAGGGCCAAT...CAGGCACATGTCATGAAGGGCAATAGGGGGATGGGAGGAAACTAGCCCTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGAGTGGCCTCTGGCTATTaGCCCTACAGTATGGATGAC | + |
Preference number: 4 (lower is better) Translates to: VLDEWMSCQITLGFGISRVASGY*PYSMDD Trigger: GTCATCCATACTGTAGGGCCAATAGCCAGAGGCCAC...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | CCCATTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCTGGGAACCATTAATGTaGCCTCTGGCTATTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: PIFYPSSFVDYTSDGHGSWEPLM*PLAIGP Trigger: AGGGCCAATAGCCAGAGGCCACATTAATGGTTCCCA...GCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | ATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCCCTTCATGACATGTGCCTGTTCCATAGAGGAGCTTaGGGATTCTGCCTCAGTTTT | + |
Preference number: 4 (lower is better) Translates to: ITGLVSSHPPIALHDMCLFHRGA*GFCLSF Trigger: AAAACTGAGGCAGAATCCCCAAGCTCCTCTATGGAA...CAGGCACATGTCATGAAGGGCAATAGGGGGATGGGAGGAAACTAGCCCTGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGCCTTCCTGTGCTTCTTaGTCATCTATCAGGGGGATC | + |
Preference number: 4 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMPSCAS*SSIRGI Trigger: GATCCCCCTGATAGATGACCAAGAAGCACAGGAAGG...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACGCCTCGCTGGAACCTTaGCTTTCTGCAAACACAGCA | + |
Preference number: 4 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYASLEP*LSANTA Trigger: TGCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGC...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | CCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCATGTTTTCTGCCTCGCTaGAACCTTGGCTTTCTGCAA | + |
Preference number: 4 (lower is better) Translates to: PLLPFMTCACLKCVWKWPCFLPR*NLGFLQ Trigger: TTGCAGAAAGCCAAGGTTCCAGCGAGGCAGAAAACA...TGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
3UTR CAA 72 bp | ATCCCCACACAAGATGACCAAACACAACGGCTGCCATaGGTAATGAGAAAGGTGGCCTGGAATTGTCTCAGT | + |
Preference number: 4 (lower is better) Translates to: IPTQDDQTQRLP*VMRKVAWNCLS Trigger: ACTGAGACAATTCCAGGCCACCTTTCTCATTACCAATGGCAGCCGTTGTGTTTGGTCATCTTGTGTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | AGGTCAGTGTTAGTTAGACACGCAACAAAACTGCATGTGTCTCCCACCCTTCTTAGGTGCTCTCTCCCATaGCATTCTCCACCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: RSVLVRHATKLHVSPTLLRCSLP*HSPPFL Trigger: GAGAAATGGTGGAGAATGTCATGGGAGAGAGCACCT...AAGAAGGGTGGGAGACACATGCAGTTTTGTTGCGTGTCTAACTAACACTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
||
CDS-3UTR TCA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCCACCAGCTTCAAGGATaGTTGATAGCAATTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: PPIALHDMCLSEVCLEMAHQLQG*LIAICK Trigger: CTTGCAAATTGCTATCAATCATCCTTGAAGCTGGTG...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACGGAAGACACAGAAGATaGTTCGATCCACCTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYGRHRR*FDPPPG Trigger: ACCAGGAGGTGGATCGAATCATCTTCTGTGTCTTCC...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | ACGAAATGCAGCTGGAGAATTAGAGCAAAGGACCCCCTTTCTTCCATGAACTTGCACCATCTCTGTGGATaGGACCAAGGAGATTCCTCA | + |
Preference number: 4 (lower is better) Translates to: TKCSWRIRAKDPLSSMNLHHLCG*DQGDSS Trigger: TGAGGAATCTCCTTGGTCTCATCCACAGAGATGGTG...CAAGTTCATGGAAGAAAGGGGGTCCTTTGCTCTAATTCTCCAGCTGCATTTCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR TCA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATTTACACCATCCACCTaGCTGTTCATGTCAACATCA | + |
Preference number: 4 (lower is better) Translates to: PHVLHCTACAVTGPVNNTFTPST*LFMSTS Trigger: TGATGTTGACATGAACAGTCAGGTGGATGGTGTAAA...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR GCA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTAAAATGCCTGTTGAAATaGAGGGGAAAGCCACTGATC | + |
Preference number: 4 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLKCLLK*RGKPLI Trigger: GATCAGTGGCTTTCCCCTGCATTTCAACAGGCATTT...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR GCA 90 bp | TTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCTCTTCAGCAGGTGCATCCTTaGCTTGAGCTTCTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: FSILPPLWIIPVMGMAALQQVHP*LELLHL Trigger: AAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTG...AAGAGCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | CCAGTGAACAACACATCTCCTTATCTGAGATGCCTTCAGTCTGGCCCAGAGCTAATTGGCCCTACAGTATaGATGACATACTTTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: PVNNTSPYLRCLQSGPELIGPTV*MTYFAG Trigger: CCCTGCAAAGTATGTCATCCATACTGTAGGGCCAAT...TAGCTCTGGGCCAGACTGAAGGCATCTCAGATAAGGAGATGTGTTGTTCACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGGCAAGGTCTTCCTTGTaGGAACCATTAATGTGGCCT | + |
Preference number: 4 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMARSSL*EPLMWP Trigger: AGGCCACATTAATGGTTCCCACAAGGAAGACCTTGC...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | GAAATAAGGAAGCTGACTCCAGGAGATTCATATTTTGCCCGACATCACGCAGATAGAACTTGCACACTTTaGGGTCCGAGCACCGCATTG | + |
Preference number: 4 (lower is better) Translates to: EIRKLTPGDSYFARHHADRTCTL*GPSTAL Trigger: CAATGCGGTGCTCGGACCCCAAAGTGTGCAAGTTCT...ATCTGCGTGATGTCGGGCAAAATATGAATCTCCTGGAGTCAGCTTCCTTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
||
CDS-3UTR TCA 90 bp | CAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGGAGGGGCCAGCAGCTCTGTaGATACAGCCATCCACACCT | + |
Preference number: 4 (lower is better) Translates to: QETLKLSIWVVSLDYLEEGPAAL*IQPSTP Trigger: AGGTGTGGATGGCTGTATTCACAGAGCTGCTGGCCC...CTCCTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | CCAAAAATGAACACACAGGGCATCCTGGGTGTGAAGAGTGGAGAATCTAGAGGCCACCAGCTTCAAGGATaGTTGATAGCAATTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: PKMNTQGILGVKSGESRGHQLQG*LIAICK Trigger: CTTGCAAATTGCTATCAATCATCCTTGAAGCTGGTG...GCCTCTAGATTCTCCACTCTTCACACCCAGGATGCCCTGTGTGTTCATTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGACCCCTCACTCTTTGCTaGGTCATTCTCTTGTCCATT | + |
Preference number: 4 (lower is better) Translates to: VLDEWMSCQITLGFGISRPLTLC*VILLSI Trigger: AATGGACAAGAGAATGACTCAGCAAAGAGTGAGGGG...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CCA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCCCTTCCATGATAGAATaGTGCTCAGAGAAACATAGT | + |
Preference number: 4 (lower is better) Translates to: PPIALHDMCLSEVCLEMAPSMIE*CSEKHS Trigger: ACTATGTTTCTCTGAGCACCATTCTATCATGGAAGG...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | GGAAGAGTCTGGCTCCAGAACACAGTTTTAAAGAGTGCCATCCTTCTCTCCGGCGCTTTTCTTCATCTGTaGTGCTTCCTGAGTATTTTC | + |
Preference number: 4 (lower is better) Translates to: GRVWLQNTVLKSAILLSGAFLHL*CFLSIF Trigger: GAAAATACTCAGGAAGCACCACAGATGAAGAAAAGC...GCCGGAGAGAAGGATGGCACTCTTTAAAACTGTGTTCTGGAGCCAGACTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
||
CDS-3UTR CCA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACGCAAGGTCTTCCTTGTaGGAACCATTAATGTGGCCT | + |
Preference number: 4 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYARSSL*EPLMWP Trigger: AGGCCACATTAATGGTTCCCACAAGGAAGACCTTGC...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGTTTTCTGCCTCGCTaGAACCTTGGCTTTCTGCAA | + |
Preference number: 4 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYCFLPR*NLGFLQ Trigger: TTGCAGAAAGCCAAGGTTCCAGCGAGGCAGAAAACA...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR TCA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACAATCTTCTTGATTTGGTaGAAGGTCTTCTGTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: PHVLHCTACAVTGPVNNTIFLIW*KVFCFH Trigger: ATGGAAACAGAAGACCTTTCACCAAATCAAGAAGAT...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCTGGACCACTTTCATCTaGATCTTCTTTCATGTCAGC | + |
Preference number: 4 (lower is better) Translates to: LYANVTNNRASFLPSPYCWTTFI*IFFHVS Trigger: GCTGACATGAAAGAAGATTCAGATGAAAGTGGTCCA...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | ACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATCTCCTTATCTGAGATGCTTTCTTCATCTGTGGTaGTTCCTGAGTATTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: TACAVTGPVNNTSPYLRCFLHLW*FLSIFF Trigger: GAAGAAAATACTCAGGAAGCACCACAGATGAAGAAA...GCATCTCAGATAAGGAGATGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCTTTCTTCATCTGTGGTaGTTCCTGAGTATTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: PPIALHDMCLSEVCLEMAFLHLW*FLSIFF Trigger: GAAGAAAATACTCAGGAAGCACCACAGATGAAGAAA...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCTGGTTGTTCCACAATTaGGGCATCTTCTTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: LYANVTNNRASFLPSPYCWLFHN*GIFLIW Trigger: CCAAATCAAGAAGATGCCGCAATTGTGGAACAACCA...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | CCCATTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCAGTTCTTTGTTCCTTTaGTTCATCTTGTGGCCCATC | + |
Preference number: 4 (lower is better) Translates to: PIFYPSSFVDYTSDGHGSSSLFL*FILWPI Trigger: GATGGGCCACAAGATGAAGCAAAGGAACAAAGAACT...GCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTAATCTTCTTGATTTGGTaGAAGGTCTTCTGTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLIFLIW*KVFCFH Trigger: ATGGAAACAGAAGACCTTTCACCAAATCAAGAAGAT...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | TACAGTTTCCAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGATTCTCCACCTTCCTGTaGTTCTTGGTCATCTATCAG | + |
Preference number: 4 (lower is better) Translates to: YSFQRILSPRFLTYPHTRFSTFL*FLVIYQ Trigger: CTGATAGATGACCAAGAAGCACAGGAAGGTGGAGAA...TCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTGGAAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCGCTCTTCTTGTGGGGTaGAGAAAGGCCTTTAGGCTC | + |
Preference number: 4 (lower is better) Translates to: LESQMKQDTPFDLNDSNTALLVG*RKAFRL Trigger: GAGCCTAAAGGCCTTTCTCCACCCCACAAGAAGAGC...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS-3UTR CCA 90 bp | CCCATTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCGAATCTTCATCTTTGTaGACTTCAGCTTTGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: PIFYPSSFVDYTSDGHGSESSSL*TSALSS Trigger: CGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTC...GCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | AGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGTAAGATCATGCATCCATCATTTTaGCCTTTGCTCTTCATCTCT | + |
Preference number: 4 (lower is better) Translates to: SNRLLPFLVCSPELGGKIMHPSF*PLLFIS Trigger: AGAGATGAAGAGCAAAGGCCAAAATGATGGATGCAT...GATCTTACCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110062.8 |
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3UTR CAA 72 bp | CCAGTAGAGAGACATAGTCTGAGATCTGAAGTCCAGTaGCCTGTCCACACTAGAAGACCTGCATTTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: PVERHSLRSEVQ*PVHTRRPAFFF Trigger: AAAGAAAAATGCAGGTCTTCTAGTGTGGACAGGCAACTGGACTTCAGATCTCAGACTATGTCTCTCTACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043836.8 ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR TCA 90 bp | TATTTTAGAAATAAGGAAGCTGACTCCAGGAGATTCATATTTTGCCCGACATCACCACCTCTAGCAGAGTaGTGTCACCTCTGTAGAGAG | + |
Preference number: 4 (lower is better) Translates to: YFRNKEADSRRFIFCPTSPPLAE*CHLCRE Trigger: CTCTCTACAGAGGTGACATCACTCTGCTAGAGGTGG...TGATGTCGGGCAAAATATGAATCTCCTGGAGTCAGCTTCCTTATTTCTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS-3UTR TCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATCCACCTCTAGCAGAGTaGTGTCACCTCTGTAGAGAG | + |
Preference number: 4 (lower is better) Translates to: TGKGQTSKLDEILIKWYHPPLAE*CHLCRE Trigger: CTCTCTACAGAGGTGACATCACTCTGCTAGAGGTGG...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGGCCCTACAGTATGGATaGCATACTTTGCAGGGAGGT | + |
Preference number: 4 (lower is better) Translates to: WQETLKLSIWVVSLDYLEALQYG*HTLQGG Trigger: ACCTCCCTGCAAAGTATGTCATCCATACTGTAGGGC...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | AATGCTAGGTGCTATACAGACTGGTGGGTGAGAAATTCATCAACAGTATTACCCGGCCTCTTTTCCTATTaGCCAAGCTGTAAGACTTTC | + |
Preference number: 4 (lower is better) Translates to: NARCYTDWWVRNSSTVLPGLFSY*PSCKTF Trigger: GAAAGTCTTACAGCTTGGGCAATAGGAAAAGAGGCC...GGGTAATACTGTTGATGAATTTCTCACCCACCAGTCTGTATAGCACCTAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043836.8 |
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CDS-3UTR GCA 90 bp | GATCTGACAGGGAAGAGTCTGGCTCCAGAACACAGTTTTAAAGAGTGCCATCCTTTTCTTCATCTGTGGTaGTTCCTGAGTATTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: DLTGKSLAPEHSFKECHPFLHLW*FLSIFF Trigger: GAAGAAAATACTCAGGAAGCACCACAGATGAAGAAA...AGGATGGCACTCTTTAAAACTGTGTTCTGGAGCCAGACTCTTCCCTGTCAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS-3UTR GCA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTAAGTATTGTCATCCTTTaGAGAATCTTCATCTTTGTG | + |
Preference number: 4 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLSIVIL*RIFIFV Trigger: CACAAAGATGAAGATTCTGCAAAGGATGACAATACT...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | CAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGGAGGGAACCTTGGCTTTCTaGAAACACAGCAGGTGCATC | + |
Preference number: 4 (lower is better) Translates to: QETLKLSIWVVSLDYLEEGTLAF*KHSRCI Trigger: GATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCC...CTCCTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATGTGGCCTCTGGCTATTaGCCCTACAGTATGGATGAC | + |
Preference number: 4 (lower is better) Translates to: TGKGQTSKLDEILIKWYHVASGY*PYSMDD Trigger: GTCATCCATACTGTAGGGCCAATAGCCAGAGGCCAC...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | CATAGTCTGAGATCTGAAGTCCAGTTGCCTGTCCACACTAGAAGACCTGCATTTATGCATCCATCATTTTaGCCTTTGCTCTTCATCTCT | + |
Preference number: 4 (lower is better) Translates to: HSLRSEVQLPVHTRRPAFMHPSF*PLLFIS Trigger: AGAGATGAAGAGCAAAGGCCAAAATGATGGATGCAT...AAATGCAGGTCTTCTAGTGTGGACAGGCAACTGGACTTCAGATCTCAGACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
||
CDS-3UTR TCA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATACCATAAATGCCTGTTaGAATGCAGGGGAAAGCCAC | + |
Preference number: 4 (lower is better) Translates to: STGKGQTSKLDEILIKWYTINAC*NAGESH Trigger: GTGGCTTTCCCCTGCATTTCAACAGGCATTTATGGT...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | CTGTATGCAAACGTGACTAATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCAGTATTGTCATCCTTTaGAGAATCTTCATCTTTGTG | + |
Preference number: 4 (lower is better) Translates to: LYANVTNNRASFLPSPYCSIVIL*RIFIFV Trigger: CACAAAGATGAAGATTCTGCAAAGGATGACAATACT...GCAATAGGGGGATGGGAGGAAACTAGCCCTGTTATTAGTCACGTTTGCATACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | CCCAACTTGTGCTATAATTTGCAGCAAATTGGCTTTTTATTTCTTTTCTCAGCTGCTCTTCTTGTGGGGTaGAGAAAGGCCTTTAGGCTC | + |
Preference number: 4 (lower is better) Translates to: PNLCYNLQQIGFLFLFSAALLVG*RKAFRL Trigger: GAGCCTAAAGGCCTTTCTCCACCCCACAAGAAGAGC...AGCTGAGAAAAGAAATAAAAAGCCAATTTGCTGCAAATTATAGCACAAGTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
||
CDS-3UTR TCA 90 bp | TCATTTTTAAGTTTAATACCTTCTCAGTTCTCAATGTTGACTCCAGGAAGGTCAAGGTGCTCTCTCCCATaGCATTCTCCACCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: SFLSLIPSQFSMLTPGRSRCSLP*HSPPFL Trigger: GAGAAATGGTGGAGAATGTCATGGGAGAGAGCACCT...TGACCTTCCTGGAGTCAACATTGAGAACTGAGAAGGTATTAAACTTAAAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR TCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTACCATAAATGCCTGTTaGAATGCAGGGGAAAGCCAC | + |
Preference number: 4 (lower is better) Translates to: HSALTNIVRRQQSFKCHSTINAC*NAGESH Trigger: GTGGCTTTCCCCTGCATTTCAACAGGCATTTATGGT...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | CCAACTTGTGCTATAATTTGCAGCAAATTGGCTTTTTATTTCTTTTCTCAGCTGAGGCTCTGGCCCTTCTaGATCTTCTTTCATGTCAGC | + |
Preference number: 4 (lower is better) Translates to: PTCAIICSKLAFYFFSQLRLWPF*IFFHVS Trigger: GCTGACATGAAAGAAGATTCAGAAGGGCCAGAGCCT...CAGCTGAGAAAAGAAATAAAAAGCCAATTTGCTGCAAATTATAGCACAAGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
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CDS-3UTR GCA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCAAATGCCTGTTGAAATaGAGGGGAAAGCCACTGATC | + |
Preference number: 4 (lower is better) Translates to: LESQMKQDTPFDLNDSNTKCLLK*RGKPLI Trigger: GATCAGTGGCTTTCCCCTGCATTTCAACAGGCATTT...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | CTGAAGTCCAGTTGCCTGTCCACACTAGAAGACCTGCATTTTTCTTTAAAACTCCCTTCCATGATAGAATaGTGCTCAGAGAAACATAGT | + |
Preference number: 4 (lower is better) Translates to: LKSSCLSTLEDLHFSLKLPSMIE*CSEKHS Trigger: ACTATGTTTCTCTGAGCACCATTCTATCATGGAAGG...GAGTTTTAAAGAAAAATGCAGGTCTTCTAGTGTGGACAGGCAACTGGACTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR CCA 90 bp | GATGAGATACTTATAAAGTGGTATCATCCCACTGTTAACTTTAGATATCCTCTCTGGGAACCATTAATGTaGCCTCTGGCTATTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: DEILIKWYHPTVNFRYPLWEPLM*PLAIGP Trigger: AGGGCCAATAGCCAGAGGCCACATTAATGGTTCCCA...GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATGCTTTGCTCTTCTTGTaGGGTGGAGAAAGGCCTTTA | + |
Preference number: 4 (lower is better) Translates to: TGKGQTSKLDEILIKWYHALLFL*GGERPL Trigger: TAAAGGCCTTTCTCCACCCCACAAGAAGAGCAAAGC...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS-3UTR TCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGATTGCGGCATCTTCTTaGTTTGGTGAAAGGTCTTCT | + |
Preference number: 4 (lower is better) Translates to: WQETLKLSIWVVSLDYLEIAASS*FGERSS Trigger: AGAAGACCTTTCACCAAATCAAGAAGATGCCGCAAT...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGTCGGAAAACCATAAATaGCTGTTGAAATGCAGGGGA | + |
Preference number: 4 (lower is better) Translates to: WQETLKLSIWVVSLDYLESENHK*LLKCRG Trigger: TCCCCTGCATTTCAACAGGCATTTATGGTTTTCCGA...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | AATAGATTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTCTGGTTTCTTTGCTTTaGTCTTCTTGTGGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: NRLESQMKQDTPFDLNDSLVSLL*SSCGVE Trigger: CTCCACCCCACAAGAAGAGCAAAGCAAAGAAACCAG...ACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAATCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR GCA 90 bp | CCCAACTTGTGCTATAATTTGCAGCAAATTGGCTTTTTATTTCTTTTCTCAGCTCTGGTTTCTTTGCTTTaGTCTTCTTGTGGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: PNLCYNLQQIGFLFLFSALVSLL*SSCGVE Trigger: CTCCACCCCACAAGAAGAGCAAAGCAAAGAAACCAG...AGCTGAGAAAAGAAATAAAAAGCCAATTTGCTGCAAATTATAGCACAAGTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
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CDS-3UTR GCA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATTGGTTGTTCCACAATTaGGGCATCTTCTTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: STGKGQTSKLDEILIKWYWLFHN*GIFLIW Trigger: CCAAATCAAGAAGATGCCGCAATTGTGGAACAACCA...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | GTCCAGTTGCCTGTCCACACTAGAAGACCTGCATTTTTCTTTAAAACTCACAAACCTTCCATGATAGAATaGTGCTCAGAGAAACATAGT | + |
Preference number: 4 (lower is better) Translates to: VQLPVHTRRPAFFFKTHKPSMIE*CSEKHS Trigger: ACTATGTTTCTCTGAGCACCATTCTATCATGGAAGG...TTTGTGAGTTTTAAAGAAAAATGCAGGTCTTCTAGTGTGGACAGGCAACTGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR CCA 90 bp | CCCAACTTGTGCTATAATTTGCAGCAAATTGGCTTTTTATTTCTTTTCTCAGCTGCTTTGCTCTTCTTGTaGGGTGGAGAAAGGCCTTTA | + |
Preference number: 4 (lower is better) Translates to: PNLCYNLQQIGFLFLFSAALLFL*GGERPL Trigger: TAAAGGCCTTTCTCCACCCCACAAGAAGAGCAAAGC...AGCTGAGAAAAGAAATAAAAAGCCAATTTGCTGCAAATTATAGCACAAGTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
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3UTR CAA 72 bp | GGTGGTAAGATCCTACTGCTGAAGACACAGCATACTTaGGTTACAGGACATACAGAAATCAATCTTGAATTG | + |
Preference number: 4 (lower is better) Translates to: GGKILLLKTQHT*VTGHTEINLEL Trigger: CAATTCAAGATTGATTTCTGTATGTCCTGTAACCAAAGTATGCTGTGTCTTCAGCAGTAGGATCTTACCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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CDS-3UTR TCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTATTGCGGCATCTTCTTaGTTTGGTGAAAGGTCTTCT | + |
Preference number: 4 (lower is better) Translates to: HSALTNIVRRQQSFKCHSIAASS*FGERSS Trigger: AGAAGACCTTTCACCAAATCAAGAAGATGCCGCAAT...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR GCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATTATTGGAGATCTTCTTaGAGACTCTCTGTTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: TGKGQTSKLDEILIKWYHYWRSS*RLSVGS Trigger: TGAGCCAACAGAGAGTCTGCAAGAAGATCTCCAATA...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS-3UTR CCA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCGAATCTTCATCTTTGTaGACTTCAGCTTTGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: LESQMKQDTPFDLNDSNTESSSL*TSALSS Trigger: CGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTC...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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3UTR CAA 72 bp | TCTGCAGTGAGTACCTTTTTAATTAGGACTATTATGTaGAAGGTCTACTTCAGTCCTCTGTATGCAAACGTG | + |
Preference number: 4 (lower is better) Translates to: SAVSTFLIRTIM*KVYFSPLYANV Trigger: CACGTTTGCATACAGAGGACTGAAGTAGACCTTCAACATAATAGTCCTAATTAAAAAGGTACTCACTGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR TCA 90 bp | ATTTTAGAAATAAGGAAGCTGACTCCAGGAGATTCATATTTTGCCCGACATCACATCTGTGGTGCTTCCTaGGTATTTTCTTCATCATTT | + |
Preference number: 4 (lower is better) Translates to: ILEIRKLTPGDSYFARHHICGAS*VFSSSF Trigger: AAATGATGAAGAAAATACTCAGGAAGCACCACAGAT...GTGATGTCGGGCAAAATATGAATCTCCTGGAGTCAGCTTCCTTATTTCTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS-3UTR GCA 90 bp | GATGAGATACTTATAAAGTGGTATCATCCCACTGTTAACTTTAGATATCCTCTCTCGGAAAACCATAAATaGCTGTTGAAATGCAGGGGA | + |
Preference number: 4 (lower is better) Translates to: DEILIKWYHPTVNFRYPLSENHK*LLKCRG Trigger: TCCCCTGCATTTCAACAGGCATTTATGGTTTTCCGA...GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | TATTTTAGAAATAAGGAAGCTGACTCCAGGAGATTCATATTTTGCCCGACATCACCTTCCATGATAGAATaGTGCTCAGAGAAACATAGT | + |
Preference number: 4 (lower is better) Translates to: YFRNKEADSRRFIFCPTSPSMIE*CSEKHS Trigger: ACTATGTTTCTCTGAGCACCATTCTATCATGGAAGG...TGATGTCGGGCAAAATATGAATCTCCTGGAGTCAGCTTCCTTATTTCTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS-3UTR CCA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATCCTTCCATGATAGAATaGTGCTCAGAGAAACATAGT | + |
Preference number: 4 (lower is better) Translates to: TGKGQTSKLDEILIKWYHPSMIE*CSEKHS Trigger: ACTATGTTTCTCTGAGCACCATTCTATCATGGAAGG...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTGCTTTTCTTCATCTGTaGTGCTTCCTGAGTATTTTC | + |
Preference number: 4 (lower is better) Translates to: HSALTNIVRRQQSFKCHSAFLHL*CFLSIF Trigger: GAAAATACTCAGGAAGCACCACAGATGAAGAAAAGC...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CCA 90 bp | GATGAGATACTTATAAAGTGGTATCATCCCACTGTTAACTTTAGATATCCTCTCAGTTTGCTTCTCCTCTaGACCACTTTCATCTTCACT | + |
Preference number: 4 (lower is better) Translates to: DEILIKWYHPTVNFRYPLSLLLL*TTFIFT Trigger: AGTGAAGATGAAAGTGGTCCAGAGGAGAAGCAAACT...GAGAGGATATCTAAAGTTAACAGTGGGATGATACCACTTTATAAGTATCTCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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3UTR CAA 72 bp | TATTATTACATCCATACATTAGTGTTACCCTCAATCTaGGTCAAAGAAGCTTCTCTGTGCAAAAGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: YYYIHTLVLPSI*VKEASLCKRQE Trigger: CTCCTGTCTTTTGCACAGAGAAGCTTCTTTGACCAAGATTGAGGGTAACACTAATGTATGGATGTAATAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR CAA 72 bp | TTATTTATAGCTTGTTGCCACTATAAGCAAACATGTTaGCATAATTCGCTGGGGAAGACTAAAGCAAAGCCA | + |
Preference number: 4 (lower is better) Translates to: LFIACCHYKQTC*HNSLGKTKAKP Trigger: TGGCTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCAACAAGCTATAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043836.8 ENSMUST00000110062.8 |
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3UTR CAA 72 bp | TCATTTTTAAGTTTAATACCTTCTCAGTTCTCAATGTaGACTCCAGGAAGGTCAGTGTTAGTTAGACACGCA | + |
Preference number: 4 (lower is better) Translates to: SFLSLIPSQFSM*TPGRSVLVRHA Trigger: TGCGTGTCTAACTAACACTGACCTTCCTGGAGTCAACATTGAGAACTGAGAAGGTATTAAACTTAAAAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR TCA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTATCTGTGGTGCTTCCTaGGTATTTTCTTCATCATTT | + |
Preference number: 4 (lower is better) Translates to: HSALTNIVRRQQSFKCHSICGAS*VFSSSF Trigger: AAATGATGAAGAAAATACTCAGGAAGCACCACAGAT...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 90 bp | GGGCTGGGCACAGGGGTGGTGTTGACACCATCTGCTTCTTGGCTCTaGCCTTCCATTTCTTCCGCAGTTTGCTTCTCCTCTGGACCACTT | + |
Preference number: 5 (lower is better) Translates to: GLGTGVVLTPSASWL*PSISSAVCFSSGPL Trigger: AAGTGGTCCAGAGGAGAAGCAAACTGCGGAAGAAATGGAAGGGCAGAGCCAAGAAGCAGATGGTGTCAACACCACCCCTGTGCCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS GCA 90 bp | GTCTGGAGTCTGGAACAGTGCTCAGCTGACTTCTCACACGCACCCTaGAGAGGAGGATGCTGCTCCAGTAGCAGAACTTGCACACTTTGG | + |
Preference number: 5 (lower is better) Translates to: VWSLEQCSADFSHAP*RGGCCSSSRTCTLW Trigger: CCAAAGTGTGCAAGTTCTGCTACTGGAGCAGCATCCTCCTCTGCAGGGTGCGTGTGAGAAGTCAGCTGAGCACTGTTCCAGACTCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS-3UTR CAA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCGAGCCCACCTGCTTCTaGGCTCTGCCCTTCCATTTC | + |
Preference number: 5 (lower is better) Translates to: PPIALHDMCLSEVCLEMAEPTCF*ALPFHF Trigger: GAAATGGAAGGGCAGAGCCAAGAAGCAGGTGGGCTC...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS TCA 90 bp | CTGGAACCTTGGCTTTCTGCAAACACAGCAGGTGCATCCTTGCCTTaGGCTTCTCCACCTTCCTGTGCTTCTTGGTCATCTATCAGGGGG | + |
Preference number: 5 (lower is better) Translates to: LEPWLSANTAGASLP*ASPPSCASWSSIRG Trigger: CCCCCTGATAGATGACCAAGAAGCACAGGAAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 90 bp | GTTTTCTGCCTCGCTGGAACCTTGGCTTTCTGCAAACACAGCAGGTaGATCCTTGCCTTGAGCTTCTCCACCTTCCTGTGCTTCTTGGTC | + |
Preference number: 5 (lower is better) Translates to: VFCLAGTLAFCKHSR*ILALSFSTFLCFLV Trigger: GACCAAGAAGCACAGGAAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGCAGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 90 bp | CCTCGCTGGAACCTTGGCTTTCTGCAAACACAGCAGGTGCATCCTTaGCTTGAGCTTCTCCACCTTCCTGTGCTTCTTGGTCATCTATCA | + |
Preference number: 5 (lower is better) Translates to: PRWNLGFLQTQQVHP*LELLHLPVLLGHLS Trigger: TGATAGATGACCAAGAAGCACAGGAAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CCA 90 bp | TGCAGAATCTTCATCTTTGTGGACTTCAGCTTTGTCTTCGGAAGCTaGGCTGGGCACAGGGGTGGTGTTGACACCATCTCTGTGGATGAG | + |
Preference number: 5 (lower is better) Translates to: CRIFIFVDFSFVFGS*AGHRGGVDTISVDE Trigger: CTCATCCACAGAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 |
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CDS CCA 90 bp | TGCAGAATCTTCATCTTTGTGGACTTCAGCTTTGTCTTCGGAAGCTaGGCTGGGCACAGGGGTGGTGTTGACACCATCTGCTTCTTGGCT | + |
Preference number: 5 (lower is better) Translates to: CRIFIFVDFSFVFGS*AGHRGGVDTICFLA Trigger: AGCCAAGAAGCAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS CCA 90 bp | CTTCATCTTGTGGCCCATCAGGACCTGAAGTGTTTTCTGCCTCGCTaGAACCTTGGCTTTCTGCAAACACAGCAGGTGCATCCTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: LHLVAHQDLKCFLPR*NLGFLQTQQVHPCL Trigger: AAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGCAGAAAACACTTCAGGTCCTGATGGGCCACAAGATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGGGCACAGGGGTGGTGTaGACACCATCTCTGTGGATG | + |
Preference number: 5 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVGTGVV*TPSLWM Trigger: CATCCACAGAGATGGTGTCAACACCACCCCTGTGCC...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS CCA 90 bp | TGCAAGGTCTTCCTTGTGGGAACCATTAATGTGGCCTCTGGCTATTaGCCCTACAGTATGGATGACATACTTTGCAGGGAGGTCGTAGCC | + |
Preference number: 5 (lower is better) Translates to: CKVFLVGTINVASGY*PYSMDDILCREVVA Trigger: GGCTACGACCTCCCTGCAAAGTATGTCATCCATACTGTAGGGCCAATAGCCAGAGGCCACATTAATGGTTCCCACAAGGAAGACCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | CCACATGTACTGCATTGTACAGCCTGTGCAGTGACAGGGCCAGTGAACAACACATTTGCTTTGCTCTTCTaGTGGGGTGGAGAAAGGCCT | + |
Preference number: 5 (lower is better) Translates to: PHVLHCTACAVTGPVNNTFALLF*WGGERP Trigger: AGGCCTTTCTCCACCCCACAAGAAGAGCAAAGCAAA...TGTGTTGTTCACTGGCCCTGTCACTGCACAGGCTGTACAATGCAGTACATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
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CDS-3UTR CAA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTGCCTCGCTGGAACCTaGGCTTTCTGCAAACACAGC | + |
Preference number: 5 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMCLAGT*AFCKHS Trigger: GCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGCA...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TGCCCAGCCTCCTCTGGTCCTCATTGTTTGAGCTACCACTGTTCCACTGGCTTCCAGTTCTTTGTTCCTTaGCTTCATCTTGTGGCCCAT | + |
Preference number: 5 (lower is better) Translates to: CPASSGPHCLSYHCSTGFQFFVP*LHLVAH Trigger: ATGGGCCACAAGATGAAGCAAAGGAACAAAGAACTG...GAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS GCA 90 bp | TGGGCTGCGACCTTCACTGGAGTCTTTAGAACTTTCTGGTTTCTTTaGTTTGCTCTTCTTGTGGGGTGGAGAAAGGCCTTTAGGCTCTGG | + |
Preference number: 5 (lower is better) Translates to: WAATFTGVFRTFWFL*FALLVGWRKAFRLW Trigger: CCAGAGCCTAAAGGCCTTTCTCCACCCCACAAGAAGAGCAAAGCAAAGAAACCAGAAAGTTCTAAAGACTCCAGTGAAGGTCGCAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
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CDS CCA 90 bp | GACTGTTCATGTCAACATCAGGACCTGAAGTGTTTTCTGCCTCGCTaGAACCTTGGCTTTCTGCAAACACAGCAGGTGCATCCTTGCCTT | + |
Preference number: 5 (lower is better) Translates to: DCSCQHQDLKCFLPR*NLGFLQTQQVHPCL Trigger: AAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGCAGAAAACACTTCAGGTCCTGATGTTGACATGAACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 |
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CDS-3UTR CAA 90 bp | TGCCCAGCCTCCTCTGGTCCTCATTGTTTGAGCTACCACTGTTCCACTGGCTTCATGATTGATAGCAATTaGCAAGGTCTTCCTTGTGGG | + |
Preference number: 5 (lower is better) Translates to: CPASSGPHCLSYHCSTGFMIDSN*QGLPCG Trigger: CCCACAAGGAAGACCTTGCAAATTGCTATCAATCAT...GAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TGCCCAGCCTCCTCTGGTCCTCATTGTTTGAGCTACCACTGTTCCACTGGCTTCGCAGAATCTTCATCTTaGTGGACTTCAGCTTTGTCT | + |
Preference number: 5 (lower is better) Translates to: CPASSGPHCLSYHCSTGFAESSS*WTSALS Trigger: AGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGC...GAAGCCAGTGGAACAGTGGTAGCTCAAACAATGAGGACCAGAGGAGGCTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGGACACCATCTGCTTCTaGGCTCTGCCCTTCCATTTC | + |
Preference number: 5 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVDTICF*ALPFHF Trigger: GAAATGGAAGGGCAGAGCCAAGAAGCAGATGGTGTC...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | AGCAACAGATTGCTGCCATTTCTCGTTTGCTCCCCAGAACTAGGTGGTAAGATCTGTCTCCCACCCTTCTaGTCTGTTTGCCTTCAGGAA | + |
Preference number: 5 (lower is better) Translates to: SNRLLPFLVCSPELGGKICLPPF*SVCLQE Trigger: TTCCTGAAGGCAAACAGACAAGAAGGGTGGGAGACA...GATCTTACCACCTAGTTCTGGGGAGCAAACGAGAAATGGCAGCAATCTGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043836.8 |
||
CDS-3UTR CAA 90 bp | CCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCATCTGGTTTCTTTGCTTaGCTCTTCTTGTGGGGTGGA | + |
Preference number: 5 (lower is better) Translates to: PLLPFMTCACLKCVWKWPSGFFA*LFLWGG Trigger: TCCACCCCACAAGAAGAGCAAAGCAAAGAAACCAGA...TGGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS-3UTR CAA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGAGGGGATCACTTCTGGTaGTTCCACAATTGCGGCATC | + |
Preference number: 5 (lower is better) Translates to: VLDEWMSCQITLGFGISRGDHFW*FHNCGI Trigger: GATGCCGCAATTGTGGAACAACCAGAAGTGATCCCC...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS TCA 90 bp | GCTCTTCTTGTGGGGTGGAGAAAGGCCTTTAGGCTCTGGCCCTTCTaGATCTTCTTTCATGTCAGCATCGGTTCCTTCATTGTTATCATC | + |
Preference number: 5 (lower is better) Translates to: ALLVGWRKAFRLWPF*IFFHVSIGSFIVII Trigger: GATGATAACAATGAAGGAACCGATGCTGACATGAAAGAAGATTCAGAAGGGCCAGAGCCTAAAGGCCTTTCTCCACCCCACAAGAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000156619.2 |
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CDS CCA 90 bp | CTGTCTTTTACAGTATTGTCATCCTTTGCAGAATCTTCATCTTTGTaGACTTCAGCTTTGTCTTCGGAAGCTGGGCTGGGCACAGGGGTG | + |
Preference number: 5 (lower is better) Translates to: LSFTVLSSFAESSSL*TSALSSEAGLGTGV Trigger: CACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCAAAGGATGACAATACTGTAAAAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | ATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCCCTTCATGACATGTGCCTGTCATCATTTTGGCCTTaGCTCTTCATCTCTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: ITGLVSSHPPIALHDMCLSSFWP*LFISSF Trigger: GAAGGAAGAGATGAAGAGCAAAGGCCAAAATGATGA...CAGGCACATGTCATGAAGGGCAATAGGGGGATGGGAGGAAACTAGCCCTGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | CCCCCTATTGCCCTTCATGACATGTGCCTGTCTGAAGTGTGTTTGGAAATGGCCGCAGAATCTTCATCTTaGTGGACTTCAGCTTTGTCT | + |
Preference number: 5 (lower is better) Translates to: PPIALHDMCLSEVCLEMAAESSS*WTSALS Trigger: AGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGC...GGCCATTTCCAAACACACTTCAGACAGGCACATGTCATGAAGGGCAATAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | ATAACAGGGCTAGTTTCCTCCCATCCCCCTATTGCCCTTCATGACATGTGCCTGTCCATTGGGAAGTTCTaGGTCACACACAGAATGATT | + |
Preference number: 5 (lower is better) Translates to: ITGLVSSHPPIALHDMCLSIGKF*VTHRMI Trigger: AATCATTCTGTGTGTGACCAAGAACTTCCCAATGGA...CAGGCACATGTCATGAAGGGCAATAGGGGGATGGGAGGAAACTAGCCCTGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS TCA 90 bp | GATCACTTCTGGTTGTTCCACAATTGCGGCATCTTCTTGATTTGGTaGAAGGTCTTCTGTTTCCATAGAGGAGCTTGGGGATTCTGCCTC | + |
Preference number: 5 (lower is better) Translates to: DHFWLFHNCGIFLIW*KVFCFHRGAWGFCL Trigger: GAGGCAGAATCCCCAAGCTCCTCTATGGAAACAGAAGACCTTTCACCAAATCAAGAAGATGCCGCAATTGTGGAACAACCAGAAGTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS TCA 90 bp | ATCAGGGGGATCACTTCTGGTTGTTCCACAATTGCGGCATCTTCTTaGTTTGGTGAAAGGTCTTCTGTTTCCATAGAGGAGCTTGGGGAT | + |
Preference number: 5 (lower is better) Translates to: IRGITSGCSTIAASS*FGERSSVSIEELGD Trigger: ATCCCCAAGCTCCTCTATGGAAACAGAAGACCTTTCACCAAATCAAGAAGATGCCGCAATTGTGGAACAACCAGAAGTGATCCCCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS TCA 90 bp | AGATCTTCTTGCAGACTCTCTGTTGGCTCATTTACACCATCCACCTaGCTGTTCATGTCAACATCAGGACCTGAAGTGTTTTCTGCCTCG | + |
Preference number: 5 (lower is better) Translates to: RSSCRLSVGSFTPST*LFMSTSGPEVFSAS Trigger: CGAGGCAGAAAACACTTCAGGTCCTGATGTTGACATGAACAGTCAGGTGGATGGTGTAAATGAGCCAACAGAGAGTCTGCAAGAAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 |
||
CDS-3UTR CAA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTATCATCATTTTGGCCTTaGCTCTTCATCTCTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLSSFWP*LFISSF Trigger: GAAGGAAGAGATGAAGAGCAAAGGCCAAAATGATGA...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | ATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTGCATTGTACAGCCTGTGTTATTGGAGATCTTCTaGCAGACTCTCTGTTGGCTC | + |
Preference number: 5 (lower is better) Translates to: MCRKHQSTSHMYCIVQPVLLEIF*QTLCWL Trigger: GAGCCAACAGAGAGTCTGCAAGAAGATCTCCAATAA...CACAGGCTGTACAATGCAGTACATGTGGGAAGTGGACTGATGCTTTCTGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110064.8 |
||
CDS CCA 90 bp | CCTCAGTTTTCCCCTCACTCTTTGCTGAGTCATTCTCTTGTCCATTaGGAAGTTCTTGGTCACACACAGAATGATTGGTCATGTCACTGT | + |
Preference number: 5 (lower is better) Translates to: PQFSPHSLLSHSLVH*EVLGHTQNDWSCHC Trigger: ACAGTGACATGACCAATCATTCTGTGTGTGACCAAGAACTTCCCAATGGACAAGAGAATGACTCAGCAAAGAGTGAGGGGAAAACTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | AAGAGTCTGGCTCCAGAACACAGTTTTAAAGAGTGCCATCCTTCTCTCCGGCATTCATCATTTTGGCCTTaGCTCTTCATCTCTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: KSLAPEHSFKECHPSLRHSSFWP*LFISSF Trigger: GAAGGAAGAGATGAAGAGCAAAGGCCAAAATGATGA...ATGCCGGAGAGAAGGATGGCACTCTTTAAAACTGTGTTCTGGAGCCAGACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
||
CDS-3UTR CAA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGATTTGCAAGGTCTTCCTaGTGGGAACCATTAATGTGG | + |
Preference number: 5 (lower is better) Translates to: VLDEWMSCQITLGFGISRFARSS*WEPLMW Trigger: CCACATTAATGGTTCCCACAAGGAAGACCTTGCAAA...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | ACGAAATGCAGCTGGAGAATTAGAGCAAAGGACCCCCTTTCTTCCATGAACTTGAACCATAAATGCCTGTaGAAATGCAGGGGAAAGCCA | + |
Preference number: 5 (lower is better) Translates to: TKCSWRIRAKDPLSSMNLNHKCL*KCRGKP Trigger: TGGCTTTCCCCTGCATTTCAACAGGCATTTATGGTT...CAAGTTCATGGAAGAAAGGGGGTCCTTTGCTCTAATTCTCCAGCTGCATTTCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | AATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGTACTCATTCTCTTGTCCATaGGGAAGTTCTTGGTCACAC | + |
Preference number: 5 (lower is better) Translates to: NGHLAFMCRKHQSTSHMYSFSCP*GSSWSH Trigger: GTGTGACCAAGAACTTCCCAATGGACAAGAGAATGA...GTACATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGATTTTCCCCTCACTCTTaGCTGAGTCATTCTCTTGTC | + |
Preference number: 5 (lower is better) Translates to: VLDEWMSCQITLGFGISRFSPHS*LSHSLV Trigger: GACAAGAGAATGACTCAGCAAAGAGTGAGGGGAAAA...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | GGAAATGGCCATCTAGCATTCATGTGCAGAAAGCATCAGTCCACTTCCCACATGCGGCATCTTCTTGATTaGGTGAAAGGTCTTCTGTTT | + |
Preference number: 5 (lower is better) Translates to: GNGHLAFMCRKHQSTSHMRHLLD*VKGLLF Trigger: AAACAGAAGACCTTTCACCAAATCAAGAAGATGCCG...CATGTGGGAAGTGGACTGATGCTTTCTGCACATGAATGCTAGATGGCCATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TTCATGAAGGCAAAGTACTGCGCTGGATGTTTAAGACTGATGGCTACAGCCAGTCCATCATTTTGGCCTTaGCTCTTCATCTCTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: FMKAKYCAGCLRLMATASPSFWP*LFISSF Trigger: GAAGGAAGAGATGAAGAGCAAAGGCCAAAATGATGG...ACTGGCTGTAGCCATCAGTCTTAAACATCCAGCGCAGTACTTTGCCTTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR CAA 90 bp | CCAAAAATGAACACACAGGGCATCCTGGGTGTGAAGAGTGGAGAATCTAGAGGCCAGTATTGTCATCCTTaGCAGAATCTTCATCTTTGT | + |
Preference number: 5 (lower is better) Translates to: PKMNTQGILGVKSGESRGQYCHP*QNLHLC Trigger: ACAAAGATGAAGATTCTGCAAAGGATGACAATACTG...GCCTCTAGATTCTCCACTCTTCACACCCAGGATGCCCTGTGTGTTCATTTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TCTCAGTTCTGGCTATTCCTCTTATCTCAGGTGTGCCTTCCCACTGTGACCCTACTGTCTTTTACAGTATaGTCATCCTTTGCAGAATCT | + |
Preference number: 5 (lower is better) Translates to: SQFWLFLLSQVCLPTVTLLSFTV*SSFAES Trigger: AGATTCTGCAAAGGATGACAATACTGTAAAAGACAG...TAGGGTCACAGTGGGAAGGCACACCTGAGATAAGAGGAATAGCCAGAACTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCTCTTCTGGTTGTTCCACAATaGCGGCATCTTCTTGATTTG | + |
Preference number: 5 (lower is better) Translates to: FSILPPLWIIPVMGMAALLVVPQ*RHLLDL Trigger: CAAATCAAGAAGATGCCGCAATTGTGGAACAACCAG...AAGAGCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | CACTCTGCTCTAACAAATATAGTTCGAAGGCAACAGTCATTTAAGTGTCATAGTTGCCTCGCTGGAACCTaGGCTTTCTGCAAACACAGC | + |
Preference number: 5 (lower is better) Translates to: HSALTNIVRRQQSFKCHSCLAGT*AFCKHS Trigger: GCTGTGTTTGCAGAAAGCCAAGGTTCCAGCGAGGCA...ACTATGACACTTAAATGACTGTTGCCTTCGAACTATATTTGTTAGAGCAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TTTTCTATCCTTCCTCCTTTGTGGATTATACCAGTGATGGGCATGGCAGCTCTTATGATTGATAGCAATTaGCAAGGTCTTCCTTGTGGG | + |
Preference number: 5 (lower is better) Translates to: FSILPPLWIIPVMGMAALMIDSN*QGLPCG Trigger: CCCACAAGGAAGACCTTGCAAATTGCTATCAATCAT...AAGAGCTGCCATGCCCATCACTGGTATAATCCACAAAGGAGGAAGGATAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | GTTTTGGATGAGTGGATGAGCTGCCAAATCACCCTTGGATTTGGCATTAGCAGATTTAGCTTCAGTTCTTaGTTCCTTTGCTTCATCTTG | + |
Preference number: 5 (lower is better) Translates to: VLDEWMSCQITLGFGISRFSFSS*FLCFIL Trigger: CAAGATGAAGCAAAGGAACAAAGAACTGAAGCTAAA...TCTGCTAATGCCAAATCCAAGGGTGATTTGGCAGCTCATCCACTCATCCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TGCCACTATAAGCAAACATGTTTGCATAATTCGCTGGGGAAGACTAAAGCAAAGCCATCATTTTGGCCTTaGCTCTTCATCTCTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: CHYKQTCLHNSLGKTKAKPSFWP*LFISSF Trigger: GAAGGAAGAGATGAAGAGCAAAGGCCAAAATGATGG...CTTTGCTTTAGTCTTCCCCAGCGAATTATGCAAACATGTTTGCTTATAGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110062.8 |
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CDS-3UTR CAA 90 bp | GTCCAGTTGCCTGTCCACACTAGAAGACCTGCATTTTTCTTTAAAACTCACAAAGATGCATCCATCATTTaGGCCTTTGCTCTTCATCTC | + |
Preference number: 5 (lower is better) Translates to: VQLPVHTRRPAFFFKTHKDASII*AFALHL Trigger: GAGATGAAGAGCAAAGGCCAAAATGATGGATGCATC...TTTGTGAGTTTTAAAGAAAAATGCAGGTCTTCTAGTGTGGACAGGCAACTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS TCA 90 bp | GAGTCATTCTCTTGTCCATTGGGAAGTTCTTGGTCACACACAGAATaGTTGGTCATGTCACTGTCTTTTACAGTATTGTCATCCTTTGCA | + |
Preference number: 5 (lower is better) Translates to: ESFSCPLGSSWSHTE*LVMSLSFTVLSSFA Trigger: TGCAAAGGATGACAATACTGTAAAAGACAGTGACATGACCAATCATTCTGTGTGTGACCAAGAACTTCCCAATGGACAAGAGAATGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATTTTGCAAGGTCTTCCTaGTGGGAACCATTAATGTGG | + |
Preference number: 5 (lower is better) Translates to: STGKGQTSKLDEILIKWYFARSS*WEPLMW Trigger: CCACATTAATGGTTCCCACAAGGAAGACCTTGCAAA...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | CCCAACTTGTGCTATAATTTGCAGCAAATTGGCTTTTTATTTCTTTTCTCAGCTTTTGCTTTGCTCTTCTaGTGGGGTGGAGAAAGGCCT | + |
Preference number: 5 (lower is better) Translates to: PNLCYNLQQIGFLFLFSAFALLF*WGGERP Trigger: AGGCCTTTCTCCACCCCACAAGAAGAGCAAAGCAAA...AGCTGAGAAAAGAAATAAAAAGCCAATTTGCTGCAAATTATAGCACAAGTTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
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CDS-3UTR CAA 90 bp | TACAGTTTCCAGAGAATTCTCTCTCCCCGTTTCTTAACCTATCCCCACACAAGACAGTATTGTCATCCTTaGCAGAATCTTCATCTTTGT | + |
Preference number: 5 (lower is better) Translates to: YSFQRILSPRFLTYPHTRQYCHP*QNLHLC Trigger: ACAAAGATGAAGATTCTGCAAAGGATGACAATACTG...TCTTGTGTGGGGATAGGTTAAGAAACGGGGAGAGAGAATTCTCTGGAAACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCTCATTCTCTTGTCCATaGGGAAGTTCTTGGTCACAC | + |
Preference number: 5 (lower is better) Translates to: LESQMKQDTPFDLNDSNTSFSCP*GSSWSH Trigger: GTGTGACCAAGAACTTCCCAATGGACAAGAGAATGA...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | CAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGGAGTTTTCCCCTCACTCTTaGCTGAGTCATTCTCTTGTC | + |
Preference number: 5 (lower is better) Translates to: QETLKLSIWVVSLDYLEEFSPHS*LSHSLV Trigger: GACAAGAGAATGACTCAGCAAAGAGTGAGGGGAAAA...CTCCTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS CCA 90 bp | CATTCTCTTGTCCATTGGGAAGTTCTTGGTCACACACAGAATGATTaGTCATGTCACTGTCTTTTACAGTATTGTCATCCTTTGCAGAAT | + |
Preference number: 5 (lower is better) Translates to: HSLVHWEVLGHTQND*SCHCLLQYCHPLQN Trigger: ATTCTGCAAAGGATGACAATACTGTAAAAGACAGTGACATGACCAATCATTCTGTGTGTGACCAAGAACTTCCCAATGGACAAGAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | CCCAACTTGTGCTATAATTTGCAGCAAATTGGCTTTTTATTTCTTTTCTCAGCTTCTGGTTTCTTTGCTTaGCTCTTCTTGTGGGGTGGA | + |
Preference number: 5 (lower is better) Translates to: PNLCYNLQQIGFLFLFSASGFFA*LFLWGG Trigger: TCCACCCCACAAGAAGAGCAAAGCAAAGAAACCAGA...AGCTGAGAAAAGAAATAAAAAGCCAATTTGCTGCAAATTATAGCACAAGTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156619.2 |
||
CDS-3UTR CAA 90 bp | TCCACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATTCCATTGGGAAGTTCTaGGTCACACACAGAATGATT | + |
Preference number: 5 (lower is better) Translates to: STGKGQTSKLDEILIKWYSIGKF*VTHRMI Trigger: AATCATTCTGTGTGTGACCAAGAACTTCCCAATGGA...ATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | TTAGAGTCCCAAATGAAACAAGACACTCCCTTTGATCTCAATGATAGTAACACCCGGCATCTTCTTGATTaGGTGAAAGGTCTTCTGTTT | + |
Preference number: 5 (lower is better) Translates to: LESQMKQDTPFDLNDSNTRHLLD*VKGLLF Trigger: AAACAGAAGACCTTTCACCAAATCAAGAAGATGCCG...GGTGTTACTATCATTGAGATCAAAGGGAGTGTCTTGTTTCATTTGGGACTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
||
CDS-3UTR CAA 90 bp | ACAGGAAAGGGCCAAACTAGCAAATTGGATGAGATACTTATAAAGTGGTATCATCTGGTTGTTCCACAATaGCGGCATCTTCTTGATTTG | + |
Preference number: 5 (lower is better) Translates to: TGKGQTSKLDEILIKWYHLVVPQ*RHLLDL Trigger: CAAATCAAGAAGATGCCGCAATTGTGGAACAACCAG...ATGATACCACTTTATAAGTATCTCATCCAATTTGCTAGTTTGGCCCTTTCCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | AAAACAGACTCTTCTCAAGGAGTCTTCAATGAGTCTTTCTTGATTCAAAATGGAGATGCATCCATCATTTaGGCCTTTGCTCTTCATCTC | + |
Preference number: 5 (lower is better) Translates to: KTDSSQGVFNESFLIQNGDASII*AFALHL Trigger: GAGATGAAGAGCAAAGGCCAAAATGATGGATGCATC...TCCATTTTGAATCAAGAAAGACTCATTGAAGACTCCTTGAGAAGAGTCTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS-3UTR CAA 90 bp | TGGCAGGAAACATTGAAGCTATCTATCTGGGTGGTATCCTTAGATTATTTAGAGCTGTCTTTTACAGTATaGTCATCCTTTGCAGAATCT | + |
Preference number: 5 (lower is better) Translates to: WQETLKLSIWVVSLDYLELSFTV*SSFAES Trigger: AGATTCTGCAAAGGATGACAATACTGTAAAAGACAG...CTCTAAATAATCTAAGGATACCACCCAGATAGATAGCTTCAATGTTTCCTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS-3UTR CAA 90 bp | TATTTTAGAAATAAGGAAGCTGACTCCAGGAGATTCATATTTTGCCCGACATCAATTTTCTTCATCATTTaGGCCTTTGCTCTTCATCTC | + |
Preference number: 5 (lower is better) Translates to: YFRNKEADSRRFIFCPTSIFFII*AFALHL Trigger: GAGATGAAGAGCAAAGGCCAAAATGATGAAGAAAAT...TGATGTCGGGCAAAATATGAATCTCCTGGAGTCAGCTTCCTTATTTCTAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS GCA 72 bp | GCTGACTTCTCACACGCACCCTGCAGAGGAGGATGCTaGTCCAGTAGCAGAACTTGCACACTTTGGGGTCCG | + |
Preference number: 6 (lower is better) Translates to: ADFSHAPCRGGC*SSSRTCTLWGP Trigger: CGGACCCCAAAGTGTGCAAGTTCTGCTACTGGAGCAGCATCCTCCTCTGCAGGGTGCGTGTGAGAAGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS TCA 72 bp | TGTCTTCGGAAGCTGGGCTGGGCACAGGGGTGGTGTTaGCACCATCTGCTTCTTGGCTCTGCCCTTCCATTT | + |
Preference number: 6 (lower is better) Translates to: CLRKLGWAQGWC*HHLLLGSALPF Trigger: AAATGGAAGGGCAGAGCCAAGAAGCAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS GCA 72 bp | CCCTGCAGAGGAGGATGCTGCTCCAGTAGCAGAACTTaGACACTTTGGGGTCCGAGCACCGCATTGACGATT | + |
Preference number: 6 (lower is better) Translates to: PCRGGCCSSSRT*TLWGPSTALTI Trigger: AATCGTCAATGCGGTGCTCGGACCCCAAAGTGTGCAAGTTCTGCTACTGGAGCAGCATCCTCCTCTGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS GCA 72 bp | CTGGAACAGTGCTCAGCTGACTTCTCACACGCACCCTaGAGAGGAGGATGCTGCTCCAGTAGCAGAACTTGC | + |
Preference number: 6 (lower is better) Translates to: LEQCSADFSHAP*RGGCCSSSRTC Trigger: GCAAGTTCTGCTACTGGAGCAGCATCCTCCTCTGCAGGGTGCGTGTGAGAAGTCAGCTGAGCACTGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS CAA 72 bp | TTGTCTTCGGAAGCTGGGCTGGGCACAGGGGTGGTGTaGACACCATCTGCTTCTTGGCTCTGCCCTTCCATT | + |
Preference number: 6 (lower is better) Translates to: LSSEAGLGTGVV*TPSASWLCPSI Trigger: AATGGAAGGGCAGAGCCAAGAAGCAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS GCA 72 bp | TCAGCTGACTTCTCACACGCACCCTGCAGAGGAGGATaGTGCTCCAGTAGCAGAACTTGCACACTTTGGGGT | + |
Preference number: 6 (lower is better) Translates to: SADFSHAPCRGG*CSSSRTCTLWG Trigger: ACCCCAAAGTGTGCAAGTTCTGCTACTGGAGCAGCATCCTCCTCTGCAGGGTGCGTGTGAGAAGTCAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110063.8 |
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CDS CCA 72 bp | CTGGGCACAGGGGTGGTGTTGACACCATCTGCTTCTTaGCTCTGCCCTTCCATTTCTTCCGCAGTTTGCTTC | + |
Preference number: 6 (lower is better) Translates to: LGTGVVLTPSAS*LCPSISSAVCF Trigger: GAAGCAAACTGCGGAAGAAATGGAAGGGCAGAGCCAAGAAGCAGATGGTGTCAACACCACCCCTGTGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS CAA 72 bp | TTGTCTTCGGAAGCTGGGCTGGGCACAGGGGTGGTGTaGACACCATCTCTGTGGATGAGACCAAGGAGATTC | + |
Preference number: 6 (lower is better) Translates to: LSSEAGLGTGVV*TPSLWMRPRRF Trigger: GAATCTCCTTGGTCTCATCCACAGAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 |
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CDS CCA 72 bp | TTCATCTTTGTGGACTTCAGCTTTGTCTTCGGAAGCTaGGCTGGGCACAGGGGTGGTGTTGACACCATCTGC | + |
Preference number: 6 (lower is better) Translates to: FIFVDFSFVFGS*AGHRGGVDTIC Trigger: GCAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS CAA 90 bp | GCTGGAACCTTGGCTTTCTGCAAACACAGCAGGTGCATCCTTGCCTaGAGCTTCTCCACCTTCCTGTGCTTCTTGGTCATCTATCAGGGG | + |
Preference number: 6 (lower is better) Translates to: AGTLAFCKHSRCILA*SFSTFLCFLVIYQG Trigger: CCCCTGATAGATGACCAAGAAGCACAGGAAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 72 bp | ACAGGGGTGGTGTTGACACCATCTGCTTCTTGGCTCTaGCCTTCCATTTCTTCCGCAGTTTGCTTCTCCTCT | + |
Preference number: 6 (lower is better) Translates to: TGVVLTPSASWL*PSISSAVCFSS Trigger: AGAGGAGAAGCAAACTGCGGAAGAAATGGAAGGGCAGAGCCAAGAAGCAGATGGTGTCAACACCACCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110067.8 |
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CDS CCA 72 bp | TTCATCTTTGTGGACTTCAGCTTTGTCTTCGGAAGCTaGGCTGGGCACAGGGGTGGTGTTGACACCATCTCT | + |
Preference number: 6 (lower is better) Translates to: FIFVDFSFVFGS*AGHRGGVDTIS Trigger: AGAGATGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 |
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CDS CAA 72 bp | ACACCTCCTCCTCCGAGAAGACTGGCATTTGCCGCATaGACGATTGCATCCACCTCTAGCAGAGTGATGTCA | + |
Preference number: 6 (lower is better) Translates to: TPPPPRRLAFAA*TIASTSSRVMS Trigger: TGACATCACTCTGCTAGAGGTGGATGCAATCGTCAATGCGGCAAATGCCAGTCTTCTCGGAGGAGGAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CAA 72 bp | TCCTTTGCAGAATCTTCATCTTTGTGGACTTCAGCTTaGTCTTCGGAAGCTGGGCTGGGCACAGGGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: SFAESSSLWTSA*SSEAGLGTGVV Trigger: CACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 72 bp | AACCTTGGCTTTCTGCAAACACAGCAGGTGCATCCTTaGCTTGAGCTTCTCCACCTTCCTGTGCTTCTTGGT | + |
Preference number: 6 (lower is better) Translates to: NLGFLQTQQVHP*LELLHLPVLLG Trigger: ACCAAGAAGCACAGGAAGGTGGAGAAGCTCAAGGCAAGGATGCACCTGCTGTGTTTGCAGAAAGCCAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CAA 90 bp | GTATTGTCATCCTTTGCAGAATCTTCATCTTTGTGGACTTCAGCTTaGTCTTCGGAAGCTGGGCTGGGCACAGGGGTGGTGTTGACACCA | + |
Preference number: 6 (lower is better) Translates to: VLSSFAESSSLWTSA*SSEAGLGTGVVLTP Trigger: TGGTGTCAACACCACCCCTGTGCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCAAAGGATGACAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 72 bp | ATACTTTGCAGGGAGGTCGTAGCCACATGTGATTTTTaGATGTCCAGTCTCACAGCCGTTCAGGTTCCGACA | + |
Preference number: 6 (lower is better) Translates to: ILCREVVATCDF*MSSLTAVQVPT Trigger: TGTCGGAACCTGAACGGCTGTGAGACTGGACATGCAAAAATCACATGTGGCTACGACCTCCCTGCAAAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CAA 72 bp | CTGCCGCAGGCTCATTCGGAAAACCATAAATGCCTGTaGAAATGCAGGGGAAAGCCACTGATCGGAGGTTAT | + |
Preference number: 6 (lower is better) Translates to: LPQAHSENHKCL*KCRGKPLIGGY Trigger: ATAACCTCCGATCAGTGGCTTTCCCCTGCATTTCAACAGGCATTTATGGTTTTCCGAATGAGCCTGCGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CCA 72 bp | TTCCTTGTGGGAACCATTAATGTGGCCTCTGGCTATTaGCCCTACAGTATGGATGACATACTTTGCAGGGAG | + |
Preference number: 6 (lower is better) Translates to: FLVGTINVASGY*PYSMDDILCRE Trigger: CTCCCTGCAAAGTATGTCATCCATACTGTAGGGCCAATAGCCAGAGGCCACATTAATGGTTCCCACAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CCA 72 bp | CAATTTGCAAGGTCTTCCTTGTGGGAACCATTAATGTaGCCTCTGGCTATTGGCCCTACAGTATGGATGACA | + |
Preference number: 6 (lower is better) Translates to: QFARSSLWEPLM*PLAIGPTVWMT Trigger: TGTCATCCATACTGTAGGGCCAATAGCCAGAGGCCACATTAATGGTTCCCACAAGGAAGACCTTGCAAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CCA 72 bp | ACAGTATTGTCATCCTTTGCAGAATCTTCATCTTTGTaGACTTCAGCTTTGTCTTCGGAAGCTGGGCTGGGC | + |
Preference number: 6 (lower is better) Translates to: TVLSSFAESSSL*TSALSSEAGLG Trigger: GCCCAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCAAAGGATGACAATACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CCA 72 bp | CTGTGCTTCTTGGTCATCTATCAGGGGGATCACTTCTaGTTGTTCCACAATTGCGGCATCTTCTTGATTTGG | + |
Preference number: 6 (lower is better) Translates to: LCFLVIYQGDHF*LFHNCGIFLIW Trigger: CCAAATCAAGAAGATGCCGCAATTGTGGAACAACCAGAAGTGATCCCCCTGATAGATGACCAAGAAGCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS TCA 72 bp | TGGTTGTTCCACAATTGCGGCATCTTCTTGATTTGGTaGAAGGTCTTCTGTTTCCATAGAGGAGCTTGGGGA | + |
Preference number: 6 (lower is better) Translates to: WLFHNCGIFLIW*KVFCFHRGAWG Trigger: TCCCCAAGCTCCTCTATGGAAACAGAAGACCTTTCACCAAATCAAGAAGATGCCGCAATTGTGGAACAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS TCA 72 bp | TGCAGACTCTCTGTTGGCTCATTTACACCATCCACCTaGCTGTTCATGTCAACATCAGGACCTGAAGTGTTT | + |
Preference number: 6 (lower is better) Translates to: CRLSVGSFTPST*LFMSTSGPEVF Trigger: AAACACTTCAGGTCCTGATGTTGACATGAACAGTCAGGTGGATGGTGTAAATGAGCCAACAGAGAGTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 |
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CDS CCA 72 bp | TCCCCTCACTCTTTGCTGAGTCATTCTCTTGTCCATTaGGAAGTTCTTGGTCACACACAGAATGATTGGTCA | + |
Preference number: 6 (lower is better) Translates to: SPHSLLSHSLVH*EVLGHTQNDWS Trigger: TGACCAATCATTCTGTGTGTGACCAAGAACTTCCCAATGGACAAGAGAATGACTCAGCAAAGAGTGAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CAA 72 bp | CATCTATCAGGGGGATCACTTCTGGTTGTTCCACAATaGCGGCATCTTCTTGATTTGGTGAAAGGTCTTCTG | + |
Preference number: 6 (lower is better) Translates to: HLSGGSLLVVPQ*RHLLDLVKGLL Trigger: CAGAAGACCTTTCACCAAATCAAGAAGATGCCGCAATTGTGGAACAACCAGAAGTGATCCCCCTGATAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CAA 90 bp | CCACCATTTCTCCAACCATTAGGGATGCATCCATCATTTTGGCCTTaGCTCTTCATCTCTTCCTTCCATGATAGAATGGTGCTCAGAGAA | + |
Preference number: 6 (lower is better) Translates to: PPFLQPLGMHPSFWP*LFISSFHDRMVLRE Trigger: TTCTCTGAGCACCATTCTATCATGGAAGGAAGAGATGAAGAGCAAAGGCCAAAATGATGGATGCATCCCTAATGGTTGGAGAAATGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110061.2 ENSMUST00000110062.8 |
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CDS TCA 72 bp | ATCACTTCTGGTTGTTCCACAATTGCGGCATCTTCTTaGTTTGGTGAAAGGTCTTCTGTTTCCATAGAGGAG | + |
Preference number: 6 (lower is better) Translates to: ITSGCSTIAASS*FGERSSVSIEE Trigger: CTCCTCTATGGAAACAGAAGACCTTTCACCAAATCAAGAAGATGCCGCAATTGTGGAACAACCAGAAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS CAA 72 bp | TTTACAGTATTGTCATCCTTTGCAGAATCTTCATCTTaGTGGACTTCAGCTTTGTCTTCGGAAGCTGGGCTG | + |
Preference number: 6 (lower is better) Translates to: FTVLSSFAESSS*WTSALSSEAGL Trigger: CAGCCCAGCTTCCGAAGACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCAAAGGATGACAATACTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS TCA 72 bp | TCTTGTCCATTGGGAAGTTCTTGGTCACACACAGAATaGTTGGTCATGTCACTGTCTTTTACAGTATTGTCA | + |
Preference number: 6 (lower is better) Translates to: SCPLGSSWSHTE*LVMSLSFTVLS Trigger: TGACAATACTGTAAAAGACAGTGACATGACCAATCATTCTGTGTGTGACCAAGAACTTCCCAATGGACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |
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CDS GCA 72 bp | GGTCATGTCACTGTCTTTTACAGTATTGTCATCCTTTaGAGAATCTTCATCTTTGTGGACTTCAGCTTTGTC | + |
Preference number: 6 (lower is better) Translates to: GHVTVFYSIVIL*RIFIFVDFSFV Trigger: GACAAAGCTGAAGTCCACAAAGATGAAGATTCTGCAAAGGATGACAATACTGTAAAAGACAGTGACATGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078027.12 ENSMUST00000110064.8 ENSMUST00000110067.8 |