Pregenerated sensors for MACO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028826Ensembl transcript IDs: ENSMUST00000030628.15, ENSMUST00000137707.8, ENSMUST00000148595.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCATTTCTGAGCGGATGCCTCGCTCTGTGCTTGAGAGGGCGCTaGTCTGACTGCGCAGCTCTTGCTCCACTTGCCGGCTGGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: GPFLSGCLALCLRGR*SDCAALAPLAGWLA Trigger: TGCAAGCCAGCCGGCAAGTGGAGCAAGAGCTGCGCAGTCAGATCAGCGCCCTCTCAAGCACAGAGCGAGGCATCCGCTCAGAAATGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR CCA 90 bp | GCATTGTGTAACTTGTTCTGCAGCAGCTCGTTCTCCTGCCGGAGCTaGCCCATTTCTGAGCGGATGCCTCGCTCTGTGCTTGAGAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: ALCNLFCSSSFSCRS*PISERMPRSVLERA Trigger: CGCCCTCTCAAGCACAGAGCGAGGCATCCGCTCAGAAATGGGCCAGCTCCGGCAGGAGAACGAGCTGCTGCAGAACAAGTTACACAATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR TCA 90 bp | GAAAGCAGTAAATGGCACGTGGGAGCTGGTCCTAGACCACGGCTTTaGTTGATCAGCCATCACTCGGCCTTGCACACCCAGCAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ESSKWHVGAGPRPRL*LISHHSALHTQQAA Trigger: AGCAGCCTGCTGGGTGTGCAAGGCCGAGTGATGGCTGATCAATCAAAGCCGTGGTCTAGGACCAGCTCCCACGTGCCATTTACTGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR GCA 90 bp | ATTTGCACGGCATTGTGTAACTTGTTCTGCAGCAGCTCGTTCTCCTaGCGGAGCTGGCCCATTTCTGAGCGGATGCCTCGCTCTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: ICTALCNLFCSSSFS*RSWPISERMPRSVL Trigger: AAGCACAGAGCGAGGCATCCGCTCAGAAATGGGCCAGCTCCGGCAGGAGAACGAGCTGCTGCAGAACAAGTTACACAATGCCGTGCAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR GCA 90 bp | TCCATTAAGTCCTTGTGTGCACTCGGGCCCTTGCTGGTGCACTTCTaGTTCTTCTCGTTTTTACTAGACGAGGAAGGAATGCTTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: SIKSLCALGPLLVHF*FFSFLLDEEGMLPF Trigger: AAATGGAAGCATTCCTTCCTCGTCTAGTAAAAACGAGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR TCA 90 bp | AGCTTCGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCTaGTATTCTGCTTGTCTTTTTGCTTCATTTGCACGGCATTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: SFGLPAQPLASSLAG*YSACLFASFARHCV Trigger: TACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR CCA 90 bp | TTAATGTCTTGTTCCAGCCTTACCAGCGCGTCTGGTTTGCTCAGCTaGTTGTTAGGAATACAGTTCTCCATTAAGTCCTTGTGTGCACTC | + |
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Preference number: 1 (lower is better) Translates to: LMSCSSLTSASGLLS*LLGIQFSIKSLCAL Trigger: GAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAACAACCAGCTGAGCAAACCAGACGCGCTGGTAAGGCTGGAACAAGACATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR CCA 90 bp | ACAAAGCTTCGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTaGCTGATATTCTGCTTGTCTTTTTGCTTCATTTGCACGGCATTG | + |
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Preference number: 1 (lower is better) Translates to: TKLRASCSAFSFFSS*LIFCLSFCFICTAL Trigger: CAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR TCA 90 bp | CTTCCTTCTGCTTCCTTAACCGCATTTTGTAGCTCACATAACTTTTaGAGCCAAAGCCCAAAGTCACCACAGGGTATCCAATGCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LPSASLTAFCSSHNF*SQSPKSPQGIQCSE Trigger: CTCACTGCATTGGATACCCTGTGGTGACTTTGGGCTTTGGCTTCAAAAGTTATGTGAGCTACAAAATGCGGTTAAGGAAGCAGAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
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| 3UTR GCA 90 bp | GCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTaGTTCATTTGCACGGCATTGTGTAACTTGTTCTGCAGCAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: AFSFFSSWLIFCLSF*FICTALCNLFCSSS Trigger: CGAGCTGCTGCAGAACAAGTTACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR GCA 90 bp | TTTTTCTCCTCCATTAGCTGCTTTTCTACAAAGCTTCGGGCTTCCTaGTCAGCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: FFSSISCFSTKLRAS*SAFSFFSSWLIFCL Trigger: CAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAAAGCAGCTAATGGAGGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR GCA 90 bp | GCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTaGTTGTCTTTTTGCTTCATTTGCACGGCATTGTGTAACTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: ASCSAFSFFSSWLIF*LSFCFICTALCNLF Trigger: GAACAAGTTACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR CCA 90 bp | ATGTCCTTTCAGAACACACAGCATGGAAGCAAAGTCAAATCGATCTaGCTTCTCAATTTCCCCAGCTTTCAAACCAGATCTCTGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: MSFQNTQHGSKVKSI*LLNFPSFQTRSLLC Trigger: GCAAAGCAGAGATCTGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTGTGTTCTGAAAGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR TCA 90 bp | CTTCCTTCTGCTTCCTTAACCGCATTTTGTAGCTCACATAACTTTTaGAGCCAAAGCCCAAAGTCACCACAGGGTATCCAATGCTTTAAT | + |
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Preference number: 1 (lower is better) Translates to: LPSASLTAFCSSHNF*SQSPKSPQGIQCFN Trigger: ATTAAAGCATTGGATACCCTGTGGTGACTTTGGGCTTTGGCTTCAAAAGTTATGTGAGCTACAAAATGCGGTTAAGGAAGCAGAAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR GCA 90 bp | CTGAGTAACACTTTCATGGTGACATTTACACAAGATGACTCAAAATaGAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LSNTFMVTFTQDDSK*KWRQHAHLAKARSL Trigger: CAAACTTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTTGTGTAAATGTCACCATGAAAGTGTTACTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR CCA 90 bp | AACACTTTCATGGTGACATTTACACAAGATGACTCAAAATGCAAATaGCGACAACATGCACACCTGGCTAAAGCTAGAAGTTTGTTTTAC | + |
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Preference number: 1 (lower is better) Translates to: NTFMVTFTQDDSKCK*RQHAHLAKARSLFY Trigger: GTAAAACAAACTTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTTGTGTAAATGTCACCATGAAAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR GCA 90 bp | CTGTTTCCTCATAAACCATTCCTAAAGAGCTTCATTCTTAAAGCTTaGTGGAATGCAGATGAACCAAAATATTGGCAAGAAATATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LFPHKPFLKSFILKA*WNADEPKYWQEICW Trigger: CCAGCATATTTCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAAGCTTTAAGAATGAAGCTCTTTAGGAATGGTTTATGAGGAAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
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| 3UTR CCA 90 bp | TTTCCTCATAAACCATTCCTAAAGAGCTTCATTCTTAAAGCTTGCTaGAATGCAGATGAACCAAAATATTGGCAAGAAATATGCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: FPHKPFLKSFILKAC*NADEPKYWQEICWW Trigger: CCACCAGCATATTTCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAAGCTTTAAGAATGAAGCTCTTTAGGAATGGTTTATGAGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATGCCTCCGTTGTGGTGTATAAGGATCGAGGAATCCATGTCCGGCAATCCCAACATTTGCTGCTCTaGAGGGAGGGCCTGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WDASVVVYKDRGIHVRQSQHLLL*REGLLK Trigger: CTTCAGCAGGCCCTCCCTCCAGAGCAGCAAATGTTG...GGATTGCCGGACATGGATTCCTCGATCCTTATACACCACAACGGAGGCATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137707.8 ENSMUST00000148595.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGACTGCCAGAGACGCTaGTTTTCGAAGCCTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LELTAMGMAILQTHRHTPDCQRR*FSKPPG Trigger: ACCAGGAGGCTTCGAAAAGCAGCGTCTCTGGCAGTC...AGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR GCA 90 bp | CACCACAGGGTATCCAATGCAGTGAGCAGCAAACGGTCGACAAAGGTCTACATGTGCTTCTGCAACATTTaGTGCTCTGGAGGGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: HHRVSNAVSSKRSTKVYMCFCNI*CSGGRA Trigger: GGCCCTCCCTCCAGAGCAGCAAATGTTGCAGAAGCA...CATGTAGACCTTTGTCGACCGTTTGCTGCTCACTGCATTGGATACCCTGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTCTCCTGCCGGAGCTGGCCCATTTCTGAGCGGATGCCTCGCTCTGTGCTTGTTGCTGGTGCACTTCTaGTTCTTCTCGTTTTTACTA | + |
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Preference number: 2 (lower is better) Translates to: RSPAGAGPFLSGCLALCLLLVHF*FFSFLL Trigger: TAGTAAAAACGAGAAGAAGCAGAAGTGCACCAGCAA...CAAGCACAGAGCGAGGCATCCGCTCAGAAATGGGCCAGCTCCGGCAGGAGAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCCTCTCTCAATCTGTCTaGTCCTTGGAGGGCCGATCC | + |
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Preference number: 2 (lower is better) Translates to: SRANSDGNGNTPNTPSHALSQSV*SLEGRS Trigger: GGATCGGCCCTCCAAGGACCAGACAGATTGAGAGAG...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR CCA 90 bp | TTAGGAATACAGTTCTCCATTAAGTCCTTGTGTGCACTCGGGCCCTTGCTGGTGTGTCCGGCAATCCCTTaGCTGCTTCCTCAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LGIQFSIKSLCALGPLLVCPAIP*LLPQPP Trigger: AGGAGGCTGAGGAAGCAGCCAAGGGATTGCCGGACA...CACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTCCTCCATTAGCTGCTTTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCTAGCAGCTCGTTCTCCTaGCGGAGCTGGCCCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: FSPPLAAFLQSFGLPAQPSSSFS*RSWPIS Trigger: AGAAATGGGCCAGCTCCGGCAGGAGAACGAGCTGCT...AGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAAAGCAGCTAATGGAGGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTTCCAGCCTTACCAGCGCGTCTGGTTTGCTCAGCTGGTTGTTAGGAATACACTCGGGCCCTTGCTaGTGCACTTCTGCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SCSSLTSASGLLSWLLGIHSGPC*CTSASS Trigger: AGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTG...TATTCCTAACAACCAGCTGAGCAAACCAGACGCGCTGGTAAGGCTGGAACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR CAA 90 bp | GGTTTGCTCAGCTGGTTGTTAGGAATACAGTTCTCCATTAAGTCCTaGTGTGCACTCGGGCCCTTGCTGGTGCACTTCTGCTTCTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: GLLSWLLGIQFSIKS*CALGPLLVHFCFFS Trigger: CGAGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAACAACCAGCTGAGCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCAAGTGGTGGCATGGTaGCCAGCAGCCCAACCACCT | + |
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Preference number: 2 (lower is better) Translates to: TQHGSKVKSIWLLNFPSFQVVAW*PAAQPP Trigger: AGGTGGTTGGGCTGCTGGTCACCATGCCACCACTTG...AAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR GCA 90 bp | TGGGATGCCTCCGTTGTGGTGTATAAGGATCGAGGAATCCATGTCCGGCAATCCTCCTTCTCCTGCTTCTaGAACATTTGCTGCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: WDASVVVYKDRGIHVRQSSFSCF*NICCSG Trigger: TCCAGAGCAGCAAATGTTGCAGAAGCAGGAGAAGGA...GGATTGCCGGACATGGATTCCTCGATCCTTATACACCACAACGGAGGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137707.8 ENSMUST00000148595.2 |
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| 3UTR CAA 90 bp | ATGTCTTGTTCCAGCCTTACCAGCGCGTCTGGTTTGCTCAGCTGGTaGTTAGGAATACAGTTCTCCATTAAGTCCTTGTGTGCACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: MSCSSLTSASGLLSW*LGIQFSIKSLCALG Trigger: CCCGAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAACAACCAGCTGAGCAAACCAGACGCGCTGGTAAGGCTGGAACAAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTTTTGCTTCATTTGCACGGCATTGTGTAACTTGTTCTGCAGCAGCTCGTCGGCAATCCCTTGGCTaGTTCCTCAGCCTCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: CLFASFARHCVTCSAAARRQSLG*FLSLLL Trigger: GAGAAGGAGGCTGAGGAAGCAGCCAAGGGATTGCCG...ACGAGCTGCTGCAGAACAAGTTACACAATGCCGTGCAAATGAAGCAAAAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAATGCAGCCAAGACCAAGTTTAACGAAAACAGTGTCCCAAAGGCAGCAGAAGACCACGGCTTTGATTaGTCAGCCATCACTCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KNAAKTKFNENSVPKAAEDHGFD*SAITRP Trigger: AGGCCGAGTGATGGCTGATCAATCAAAGCCGTGGTC...TTCTGCTGCCTTTGGGACACTGTTTTCGTTAAACTTGGTCTTGGCTGCATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR GCA 90 bp | TTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCTCCTTCTCCTGCTTCTaGAACATTTGCTGCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: FLQSFGLPAQPLASSLAGSFSCF*NICCSG Trigger: TCCAGAGCAGCAAATGTTGCAGAAGCAGGAGAAGGA...GCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTCAACATTTGCTGCTCTaGAGGGAGGGCCTGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SCSAFSFFSSWLIFCLSFQHLLL*REGLLK Trigger: CTTCAGCAGGCCCTCCCTCCAGAGCAGCAAATGTTG...AAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCGTTGTGGTGTATAAGGATCGAGGAATCCATGTCCGGCAATCCCTTGGCTTTGCTGGAATGCAGATaGACCAAAATATTGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PPLWCIRIEESMSGNPLALLECR*TKILAR Trigger: TCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAA...AGCCAAGGGATTGCCGGACATGGATTCCTCGATCCTTATACACCACAACGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
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| 3UTR CAA 90 bp | TTAGGAATACAGTTCTCCATTAAGTCCTTGTGTGCACTCGGGCCCTaGCTGGTGCACTTCTGCTTCTTCTCGTTTTTACTAGACGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LGIQFSIKSLCALGP*LVHFCFFSFLLDEE Trigger: TTCCTCGTCTAGTAAAAACGAGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGGCCTGCTGAAGAAGCTGCATGTAAAACTCGTTCTCCTTCTGAACTTCAGCTCACATAACTTTTaGAGCCAAAGCCCAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: REGLLKKLHVKLVLLLNFSSHNF*SQSPKS Trigger: TGACTTTGGGCTTTGGCTTCAAAAGTTATGTGAGCT...GAAGTTCAGAAGGAGAACGAGTTTTACATGCAGCTTCTTCAGCAGGCCCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137707.8 ENSMUST00000148595.2 |
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| 3UTR CAA 90 bp | CCTTTTTCTCGATATTCTATCTCTGGCAACGTTGTGGACAGTTTTTaGTTGGCTGGGATGCCTCCGTTGTGGTGTATAAGGATCGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PFSRYSISGNVVDSF*LAGMPPLWCIRIEE Trigger: TTCCTCGATCCTTATACACCACAACGGAGGCATCCCAGCCAACAAAAAACTGTCCACAACGTTGCCAGAGATAGAATATCGAGAAAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000137707.8 ENSMUST00000148595.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCCTCTCTCAGCTTAAGTaGCTCTCTCTCAATCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: HSMEAKSNRSGFSISPAFLSQLK*LSLNLS Trigger: AGACAGATTGAGAGAGAGTCACTTAAGCTGAGAGAG...GAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTCCTCCATTAGCTGCTTTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCTAGCTCACATAACTTTTaGAGCCAAAGCCCAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FSPPLAAFLQSFGLPAQPSSHNF*SQSPKS Trigger: TGACTTTGGGCTTTGGCTTCAAAAGTTATGTGAGCT...AGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAAAGCAGCTAATGGAGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTGCTTCATTTGCACGGCAGGGATGCCTCCGTTGTaGTGTATAAGGATCGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FFSSWLIFCLSFCFICTAGMPPL*CIRIEE Trigger: TTCCTCGATCCTTATACACCACAACGGAGGCATCCC...TGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR CAA 90 bp | TCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTGCTaGTCTTTTTGCTTCATTTGCACGGCATTGTGTAACTTGTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SCSAFSFFSSWLIFC*SFCFICTALCNLFC Trigger: GCAGAACAAGTTACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTACTTCCAAGAACAACTaGTGGGCGGTTCTAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: TQHGSKVKSIWLLNFPSFTSKNN*WAVLIR Trigger: TCTGATTAGAACCGCCCATCAGTTGTTCTTGGAAGT...AAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR TCA 90 bp | AAGATGACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAACCTATAGTACACAGCTaGACCAGGATCTTTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KMTQNANGDNMHTWLKLEPIVHS*TRIFVQ Trigger: CTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGG...TTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTGCTTCATTTGCACGGCATTGTGTAACTTGTTCTaGAGCAGCTCGTTCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: FFSSWLIFCLSFCFICTALCNLF*SSSFSC Trigger: GCAGGAGAACGAGCTGCTGCAGAACAAGTTACACAA...TGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCAAATCTTTAATGCAGCTATaGAATCAGAGCTGTGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SMEAKSNRSGFSISPAFKSLMQL*NQSCVG Trigger: CCCCACACAGCTCTGATTCCATAGCTGCATTAAAGA...TTTGAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTCTGGTTTGCTCAGCTaGTTGTTAGGAATACAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SCSAFSFFSSWLIFCLSFSGLLS*LLGIQF Trigger: GAACTGTATTCCTAACAACCAGCTGAGCAAACCAGA...AAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCTGAAGAAGCTGCATGTAAAACTCGTTCTCCTTCTGAACTTCCTTCTGCTAATACTGAGAAGGCCTaGATGAACAAGAACTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PAEEAACKTRSPSELPSANTEKA*MNKNFN Trigger: GTTAAAGTTCTTGTTCATTCAGGCCTTCTCAGTATT...AGCAGAAGGAAGTTCAGAAGGAGAACGAGTTTTACATGCAGCTTCTTCAGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAATCAGAACACACAGCATaGAAGCAAAGTCAAATCGAT | + |
|
Preference number: 2 (lower is better) Translates to: KMTQNANGDNMHTWLKLESEHTA*KQSQID Trigger: ATCGATTTGACTTTGCTTCCATGCTGTGTGTTCTGA...TTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTGCTTCATTTGCACGGCATCGATATTCTATCTCTaGCAACGTTGTGGACAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FFSSWLIFCLSFCFICTASIFYL*QRCGQF Trigger: AAACTGTCCACAACGTTGCCAGAGATAGAATATCGA...TGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR TCA 72 bp | CGGATGCCTCGCTCTGTGCTTGAGAGGGCGCTGATCTaGCTGCGCAGCTCTTGCTCCACTTGCCGGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RMPRSVLERALI*LRSSCSTCRLA Trigger: AGCCAGCCGGCAAGTGGAGCAAGAGCTGCGCAGTCAGATCAGCGCCCTCTCAAGCACAGAGCGAGGCATCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR TCA 72 bp | CTGAGCGGATGCCTCGCTCTGTGCTTGAGAGGGCGCTaGTCTGACTGCGCAGCTCTTGCTCCACTTGCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSGCLALCLRGR*SDCAALAPLAG Trigger: GCCGGCAAGTGGAGCAAGAGCTGCGCAGTCAGATCAGCGCCCTCTCAAGCACAGAGCGAGGCATCCGCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR GCA 72 bp | GCATTGTGTAACTTGTTCTGCAGCAGCTCGTTCTCCTaGCGGAGCTGGCCCATTTCTGAGCGGATGCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: ALCNLFCSSSFS*RSWPISERMPR Trigger: GCGAGGCATCCGCTCAGAAATGGGCCAGCTCCGGCAGGAGAACGAGCTGCTGCAGAACAAGTTACACAATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR CCA 72 bp | AACTTGTTCTGCAGCAGCTCGTTCTCCTGCCGGAGCTaGCCCATTTCTGAGCGGATGCCTCGCTCTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLFCSSSFSCRS*PISERMPRSVL Trigger: AAGCACAGAGCGAGGCATCCGCTCAGAAATGGGCCAGCTCCGGCAGGAGAACGAGCTGCTGCAGAACAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCCTGACTGCGCAGCTCTaGCTCCACTTGCCGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLQSFGLPAQPLASSLAGLTAQL*LHLPAG Trigger: GCCAGCCGGCAAGTGGAGCAAGAGCTGCGCAGTCAG...GCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR TCA 72 bp | AAATGGCACGTGGGAGCTGGTCCTAGACCACGGCTTTaGTTGATCAGCCATCACTCGGCCTTGCACACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KWHVGAGPRPRL*LISHHSALHTQ Trigger: CTGGGTGTGCAAGGCCGAGTGATGGCTGATCAATCAAAGCCGTGGTCTAGGACCAGCTCCCACGTGCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR GCA 72 bp | GGGAATGGCAATACTCCAAACACACCGTCACACGCCTaGACGCCAGTCTCACCCTTAAGTCTCTCTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GNGNTPNTPSHA*TPVSPLSLSQL Trigger: AAGCTGAGAGAGACTTAAGGGTGAGACTGGCGTGCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR TCA 72 bp | CTAGACGAGGAAGGAATGCTTCCATTTGTAGCGCTGTaGCTTCGAGGCGAGGAGTTCACAACTCCACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LDEEGMLPFVAL*LRGEEFTTPLA Trigger: TGCCAGTGGAGTTGTGAACTCCTCGCCTCGAAGTCACAGCGCTACAAATGGAAGCATTCCTTCCTCGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCTCCTCCATTAGCTGCTTTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCGCTGGGATGCCTCCGTaGTGGTGTATAAGGATCGAG | + |
|
Preference number: 3 (lower is better) Translates to: FFSSISCFSTKLRASCSAAGMPP*WCIRIE Trigger: CTCGATCCTTATACACCACAACGGAGGCATCCCAGC...GGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAAAGCAGCTAATGGAGGAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATTAAGTCCTTGTGTGCACTCGGGCCCTTGCTGGTGCACTTCTGCTTCTTCTCCAAGGTTGTGTTTCTaGGCATCCTTGTCCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLSPCVHSGPCWCTSASSPRLCF*ASLSFS Trigger: AGAGAAGGACAAGGATGCCAAGAAACACAACCTTGG...AGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR GCA 72 bp | TCCTTGTGTGCACTCGGGCCCTTGCTGGTGCACTTCTaGTTCTTCTCGTTTTTACTAGACGAGGAAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: SLCALGPLLVHF*FFSFLLDEEGM Trigger: CATTCCTTCCTCGTCTAGTAAAAACGAGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCAACAACCACTCCTCCTaGGCACAAGAGCTGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSMEAKSNRSGFSISPAFNNHSS*AQELRN Trigger: GTTCCTCAGCTCTTGTGCCAAGGAGGAGTGGTTGTT...GAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR CCA 72 bp | TGTTCCAGCCTTACCAGCGCGTCTGGTTTGCTCAGCTaGTTGTTAGGAATACAGTTCTCCATTAAGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CSSLTSASGLLS*LLGIQFSIKSL Trigger: CAAGGACTTAATGGAGAACTGTATTCCTAACAACCAGCTGAGCAAACCAGACGCGCTGGTAAGGCTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR CCA 72 bp | CGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTaGCTGATATTCTGCTTGTCTTTTTGCTTCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RASCSAFSFFSS*LIFCLSFCFIC Trigger: GCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR TCA 72 bp | GCTTCCTTAACCGCATTTTGTAGCTCACATAACTTTTaGAGCCAAAGCCCAAAGTCACCACAGGGTATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ASLTAFCSSHNF*SQSPKSPQGIQ Trigger: TTGGATACCCTGTGGTGACTTTGGGCTTTGGCTTCAAAAGTTATGTGAGCTACAAAATGCGGTTAAGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137707.8 ENSMUST00000148595.2 |
||
| 3UTR GCA 72 bp | TCAGCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTaGTTGTCTTTTTGCTTCATTTGCACGGCATTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SAFSFFSSWLIF*LSFCFICTALC Trigger: ACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCAATCTGTCTGGTCCTTGGAGGGCCGATCCCTCTTTTCTCTGTAATATAGGCAAAATTGGCTACTaGAAATCCAAGAATGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLNLSGPWRADPSFLCNIGKIGY*KSKNGF Trigger: AAAACCATTCTTGGATTTCAAGTAGCCAATTTTGCC...TATATTACAGAGAAAAGAGGGATCGGCCCTCCAAGGACCAGACAGATTGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR GCA 72 bp | ACTTTCATGGTGACATTTACACAAGATGACTCAAAATaGAAATGGCGACAACATGCACACCTGGCTAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TFMVTFTQDDSK*KWRQHAHLAKA Trigger: AGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTTGTGTAAATGTCACCATGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR GCA 72 bp | TTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTaGTTCATTTGCACGGCATTGTGTAACTTGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FFSSWLIFCLSF*FICTALCNLFC Trigger: GCAGAACAAGTTACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR CCA 72 bp | ATGGTGACATTTACACAAGATGACTCAAAATGCAAATaGCGACAACATGCACACCTGGCTAAAGCTAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MVTFTQDDSKCK*RQHAHLAKARS Trigger: ACTTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTTGTGTAAATGTCACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCTAGAAACTAAGCTTTaGTTGTCGTCAGTGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: TQHGSKVKSIWLLNFPSFLETKL*LSSVNT Trigger: TGTATTCACTGACGACAACAAAAGCTTAGTTTCTAG...AAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCTCTAGCTGGCTGATATTCTGCTTGTCTTTTTGCTTCATTTGCACGGCACATATACTCAATCTCTaGTATCTTAGAGTCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FFSSWLIFCLSFCFICTAHILNL*YLRVYR Trigger: CCTGTAGACTCTAAGATACAAGAGATTGAGTATATG...TGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| 3UTR GCA 72 bp | CATAAACCATTCCTAAAGAGCTTCATTCTTAAAGCTTaGTGGAATGCAGATGAACCAAAATATTGGCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HKPFLKSFILKA*WNADEPKYWQE Trigger: TTCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAAGCTTTAAGAATGAAGCTCTTTAGGAATGGTTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| 3UTR CCA 72 bp | AAACCATTCCTAAAGAGCTTCATTCTTAAAGCTTGCTaGAATGCAGATGAACCAAAATATTGGCAAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: KPFLKSFILKAC*NADEPKYWQEI Trigger: TATTTCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAAGCTTTAAGAATGAAGCTCTTTAGGAATGGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR GCA 90 bp | TCTTGTTCCAGCCTTACCAGCGCGTCTGGTTTGCTCAGCTGGTTGTTAGGAATAGGCGGCGGAGCTTACTaGAGTCGGCGTTCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSSLTSASGLLSWLLGIGGGAY*SRRSAA Trigger: AGCGGCGGAACGCCGACTGCAGTAAGCTCCGCCGCC...TATTCCTAACAACCAGCTGAGCAAACCAGACGCGCTGGTAAGGCTGGAACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCACCACAGGGTATCCAATGCAGTGAGCAGCAAACGGTCGACAAAGGTCTAGGCGGCGGAGCTTACTaGAGTCGGCGTTCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPQGIQCSEQQTVDKGLGGGAY*SRRSAA Trigger: AGCGGCGGAACGCCGACTGCAGTAAGCTCCGCCGCC...TAGACCTTTGTCGACCGTTTGCTGCTCACTGCATTGGATACCCTGTGGTGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGCGAGCTGGCCCATTTCTaGGCGGATGCCTCGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RANSDGNGNTPNTPSHACELAHF*ADASLC Trigger: ACAGAGCGAGGCATCCGCTCAGAAATGGGCCAGCTC...GCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | AGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGCGCTCCACTTGCCGGCTaGCTTGCAGGTCAGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RANSDGNGNTPNTPSHACAPLAG*LAGQPL Trigger: TAAAGGCTGACCTGCAAGCCAGCCGGCAAGTGGAGC...GCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | TTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCCGTAGATACCCTCGGTaGTCCGGTTCCGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLQSFGLPAQPLASSLAGRRYPR*SGSASG Trigger: CCCTGAAGCGGAACCGGATCACCGAGGGTATCTACG...GCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAATTTCCCCAGCTTTCAAACCAGATCTCTGCTTTGCCCGTCCTCTCTCTCGCCTCGCTCTGTGCTTaGGAGGGCGCTGATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SQFPQLSNQISALPVLSLASLCA*EGADLT Trigger: AGTCAGATCAGCGCCCTCTCAAGCACAGAGCGAGGC...GAGAGAGAGGACGGGCAAAGCAGAGATCTGGTTTGAAAGCTGGGGAAATTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | AAGAATGCAGCCAAGACCAAGTTTAACGAAAACAGTGTCCCAAAGGCAGCAGAAGGCGGCGGAGCTTACTaGAGTCGGCGTTCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNAAKTKFNENSVPKAAEGGGAY*SRRSAA Trigger: AGCGGCGGAACGCCGACTGCAGTAAGCTCCGCCGCC...TTCTGCTGCCTTTGGGACACTGTTTTCGTTAAACTTGGTCTTGGCTGCATTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGCTTCTGCAACATTTGCTaGTCTGGAGGGAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RANSDGNGNTPNTPSHACFCNIC*SGGRAC Trigger: GCAGGCCCTCCCTCCAGAGCAGCAAATGTTGCAGAA...GCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | CTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTTTCTCCTGCCGGAGCTaGCCCATTTCTGAGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LELTAMGMAILQTHRHTPFSCRS*PISERM Trigger: CATCCGCTCAGAAATGGGCCAGCTCCGGCAGGAGAA...AGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | CACCACAGGGTATCCAATGCAGTGAGCAGCAAACGGTCGACAAAGGTCTACATGGCGCCAGGCCTGGACTaGAGAGTTAGTTGTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHRVSNAVSSKRSTKVYMAPGLD*RVSCKV Trigger: CACCTTACAACTAACTCTCCAGTCCAGGCCTGGCGC...CATGTAGACCTTTGTCGACCGTTTGCTGCTCACTGCATTGGATACCCTGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR GCA 90 bp | CTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTCCACAGGGTATCCAATaGAGTGAGCAGCAAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LELTAMGMAILQTHRHTPPQGIQ*SEQQTV Trigger: GACCGTTTGCTGCTCACTGCATTGGATACCCTGTGG...AGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | ACTCCCCTTTCTGTGTGCCATACGTACTGGACCCATACATATGTGCTAGCAGCGCCAAAGCGCCAGGCCTaGACTGGAGAGTTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPLSVCHTYWTHTYVLAAPKRQA*TGELVV Trigger: TACAACTAACTCTCCAGTCCAGGCCTGGCGCTTTGG...CGCTGCTAGCACATATGTATGGGTCCAGTACGTATGGCACACAGAAAGGGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR TCA 90 bp | GACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAAGTTTGCGTAGATACCCTCGGTaGTCCGGTTCCGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKCKWRQHAHLAKARSLRRYPR*SGSASG Trigger: CCCTGAAGCGGAACCGGATCACCGAGGGTATCTACG...CAAACTTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCCAGCTTCTAGCTCTCTaGTCCGACTCCGTAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRANSDGNGNTPNTPSHAQLLAL*SDSVRF Trigger: AAACCTTACGGAGTCGGATCAGAGAGCTAGAAGCTG...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTCAGTTCCAGTTCCCTaGTCTGCTCCTCCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRANSDGNGNTPNTPSHASVPVP*SAPPSL Trigger: AAGTGAAGGAGGAGCAGATCAGGGAACTGGAACTGA...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTACTTCCGAAGCTCCTaGACCTTCAGTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRANSDGNGNTPNTPSHAYFRSS*TFSSSS Trigger: GGAACTGGAACTGAAGGTTCAGGAGCTTCGGAAGTA...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | GATCTGGCTTCTCAATTTCCCCAGCTTTCAAACCAGATCTCTGCTTTGCCCGTCACTTGCCGGCTGGCTTaGAGGTCAGCCTTTAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLASQFPQLSNQISALPVTCRLA*RSAFSF Trigger: AAAGCTAAAGGCTGACCTGCAAGCCAGCCGGCAAGT...GACGGGCAAAGCAGAGATCTGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | TTTAACGAAAACAGTGTCCCAAAGGCAGCAGAATGGGGGAAACCTCATCAACACAGCTCTTGCTCCACTTaGCGGCTGGCTTGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNENSVPKAAEWGKPHQHSSCST*RLACRS Trigger: TGACCTGCAAGCCAGCCGGCAAGTGGAGCAAGAGCT...GTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTGGGACACTGTTTTCGTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGCCTTTGCATCACCAAGTaGAGAGAAGAGGTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RANSDGNGNTPNTPSHACLCITK*REEVQL Trigger: AAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAG...GCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR CAA 72 bp | AGCTGGTTGTTAGGAATACAGTTCTCCATTAAGTCCTaGTGTGCACTCGGGCCCTTGCTGGTGCACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWLLGIQFSIKS*CALGPLLVHFC Trigger: GCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAACAACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCCCAGTCCTTGGTATCTaGAGGAATCATAGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRANSDGNGNTPNTPSHAPVLGI*RNHRRF Trigger: GAAGCGTCTATGATTCCTTCAGATACCAAGGACTGG...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | CACCACAGGGTATCCAATGCAGTGAGCAGCAAACGGTCGACAAAGGTCTACATGGCAGTCCTTGGTATCTaGAGGAATCATAGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHRVSNAVSSKRSTKVYMAVLGI*RNHRRF Trigger: GAAGCGTCTATGATTCCTTCAGATACCAAGGACTGC...CATGTAGACCTTTGTCGACCGTTTGCTGCTCACTGCATTGGATACCCTGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCAGCAGAATGGGGGAAACCTCATCAACACAGTGACAATTTTCCATGTTAGCAGCTCGTTCTCCTaGCGGAGCTGGCCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQQNGGNLINTVTIFHVSSSFS*RSWPIS Trigger: AGAAATGGGCCAGCTCCGGCAGGAGAACGAGCTGCT...AACATGGAAAATTGTCACTGTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGGCCTGCTGAAGAAGCTGCATGTAAAACTCGTTCTCCTTCTGAACTTCTTGGAAGCATGGATTTaGTCTGACCAAAGCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REGLLKKLHVKLVLLLNFLEAWI*SDQSAR Trigger: CCTGGCGCTTTGGTCAGAGCAAATCCATGCTTCCAA...GAAGTTCAGAAGGAGAACGAGTTTTACATGCAGCTTCTTCAGCAGGCCCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR CCA 90 bp | GACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAAGTTTGTGTCCGGCAATCCCTTaGCTGCTTCCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKCKWRQHAHLAKARSLCPAIP*LLPQPP Trigger: AGGAGGCTGAGGAAGCAGCCAAGGGATTGCCGGACA...CAAACTTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | AAGAATGCAGCCAAGACCAAGTTTAACGAAAACAGTGTCCCAAAGGCAGCAGAACGGGGCTCAGGGGACTaGTGGCAGCACTGTATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KNAAKTKFNENSVPKAAERGSGD*WQHCML Trigger: TAACATACAGTGCTGCCACCAGTCCCCTGAGCCCCG...TTCTGCTGCCTTTGGGACACTGTTTTCGTTAAACTTGGTCTTGGCTGCATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | TTTCTACAAAGCTTCGGGCTTCCTGCTCAGCCTTTAGCTTCTTCTCTAGCTGGCCCAGTCCTTGGTATCTaGAGGAATCATAGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLQSFGLPAQPLASSLAGPVLGI*RNHRRF Trigger: GAAGCGTCTATGATTCCTTCAGATACCAAGGACTGG...GCCAGCTAGAGAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTTTGTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAATACAGTTCTCCATTAAGTCCTTGTGTGCACTCGGGCCCTTGCTGGTGAAAGAGGATCCAGAGTaGCACTGTAGGCAAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGIQFSIKSLCALGPLLVKEDPE*HCRQTH Trigger: GTGTGTTTGCCTACAGTGTCACTCTGGATCCTCTTT...CACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAACTGTATTCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCAAACCACGGCAATCCCTTGGCTaGTTCCTCAGCCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MEAKSNRSGFSISPAFKPRQSLG*FLSLLL Trigger: GAGAAGGAGGCTGAGGAAGCAGCCAAGGGATTGCCG...TGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | GATCTGGCTTCTCAATTTCCCCAGCTTTCAAACCAGATCTCTGCTTTGCCCGTCTCCAGTTCCCTGATCTaGTCCTCCTTCACTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DLASQFPQLSNQISALPVSSSLI*SSFTFM Trigger: CATGAAAGTGAAGGAGGAGCAGATCAGGGAACTGGA...GACGGGCAAAGCAGAGATCTGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAATCTGTCTGGTCCTTGGAGGGCCGATCCCTCTTTTCTCTGTAATATACTCCAGCTGCCGCTTTaGATCACCAAGTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNLSGPWRADPSFLCNILQLPL*ITKCRE Trigger: TTCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGAG...TATATTACAGAGAAAAGAGGGATCGGCCCTCCAAGGACCAGACAGATTGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCGTGTGCCATACGTACTaGACCCATACATATGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRANSDGNGNTPNTPSHAVCHTY*THTYVL Trigger: TAGCACATATGTATGGGTCCAGTACGTATGGCACAC...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | AAGAATGCAGCCAAGACCAAGTTTAACGAAAACAGTGTCCCAAAGGCAGCAGAACAACATTTGCTGCTCTaGAGGGAGGGCCTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNAAKTKFNENSVPKAAEQHLLL*REGLLK Trigger: CTTCAGCAGGCCCTCCCTCCAGAGCAGCAAATGTTG...TTCTGCTGCCTTTGGGACACTGTTTTCGTTAAACTTGGTCTTGGCTGCATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGCACAAGAGCTGAGGAACTGTCAGACATCTGTAAACCATCAAACTCCAGCGTTTTGTCTTGCATaGCGGAGAGGGCTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAQELRNCQTSVNHQTPAFCLA*RRGLTS Trigger: TGATGTCAGCCCTCTCCGCCATGCAAGACAAAACGC...TGGAGTTTGATGGTTTACAGATGTCTGACAGTTCCTCAGCTCTTGTGCCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR CAA 72 bp | CAGTTCTCCATTAAGTCCTTGTGTGCACTCGGGCCCTaGCTGGTGCACTTCTGCTTCTTCTCGTTTTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: QFSIKSLCALGP*LVHFCFFSFLL Trigger: TAGTAAAAACGAGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCACACTCGGGCCCTTGCTaGTGCACTTCTGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSHSGPC*CTSASS Trigger: AGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGAGTG...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | GACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAAGTTTGCAGCCCGTGCAGCTGTaGCTTCTTCTAACTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSKCKWRQHAHLAKARSLQPVQL*LLLTSS Trigger: GGAAGAAGTTAGAAGAAGCCACAGCTGCACGGGCTG...CAAACTTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCAAACCAGGCTCAGGGGACTGGTaGCAGCACTGTATGTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: MEAKSNRSGFSISPAFKPGSGDW*QHCMLC Trigger: GCATAACATACAGTGCTGCCACCAGTCCCCTGAGCC...TGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAGCAGAATGGGGGAAACCTCATCAACACAGTGACAATTTTCCATGTTCAAGTCCAGAGGGGCTaGTCTCCACAAACTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRQQNGGNLINTVTIFHVQVQRG*SPQTWK Trigger: CTTCCAAGTTTGTGGAGACCAGCCCCTCTGGACTTG...AACATGGAAAATTGTCACTGTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | GCTTCATTCTTAAAGCTTGCTGGAATGCAGATGAACCAAAATATTGGCAAGAAACGTAGATACCCTCGGTaGTCCGGTTCCGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFLKLAGMQMNQNIGKKRRYPR*SGSASG Trigger: CCCTGAAGCGGAACCGGATCACCGAGGGTATCTACG...TTTCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAAGCTTTAAGAATGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| CDS-3UTR GCA 90 bp | GACAGAGACAGGCGGATCTCTAAATTCAAGCACAGCCTAGTTTATAGAGGAAGTGGCAAGGAGGACAAGTaGCCACACTACCAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: DRDRRISKFKHSLVYRGSGKEDK*PHYQEF Trigger: AAATTCCTGGTAGTGTGGGCACTTGTCCTCCTTGCC...ACTTCCTCTATAAACTAGGCTGTGCTTGAATTTAGAGATCCGCCTGTCTCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR GCA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCACCATTTCTGAGCGGATaGCTCGCTCTGTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSPFLSG*LALCLR Trigger: TCTCAAGCACAGAGCGAGGCATCCGCTCAGAAATGG...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | TTTAACGAAAACAGTGTCCCAAAGGCAGCAGAATGGGGGAAACCTCATCAACACTTGTGTAACTTGTTCTaGAGCAGCTCGTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNENSVPKAAEWGKPHQHLCNLF*SSSFSC Trigger: GCAGGAGAACGAGCTGCTGCAGAACAAGTTACACAA...GTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTGGGACACTGTTTTCGTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | AGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGCAGCTGGCTGATATTCTaGTTGTCTTTTTGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RANSDGNGNTPNTPSHACSWLIF*LSFCFI Trigger: AATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCT...GCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | AAGATGACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAATGTTGCGTTTTGTCTTaGATGGCGGAGAGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KMTQNANGDNMHTWLKLECCVLS*MAERAD Trigger: GTCAGCCCTCTCCGCCATGCAAGACAAAACGCAACA...TTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | CACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCCTGTTCTCTAGGTGTTaGGTTTTGTCTTGCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSMEAKSNRSGFSISPAFLFSRC*VLSCMA Trigger: CGCCATGCAAGACAAAACGCAACACCTAGAGAACAG...GAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCATGGGCAATCTCCAGCTaGCGCTTTGCATCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSWAISS*RFASPS Trigger: ACTTGGTGATGCAAAGCGGCAGCTGGAGATTGCCCA...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | AAGTCACCACAGGGTATCCAATGCAGTGAGCAGCAAACGGTCGACAAAGGTCTACTTGAAGCCATCTTTTaGAAGCATGGATTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSPQGIQCSEQQTVDKGLLEAIF*KHGFAL Trigger: CAGAGCAAATCCATGCTTCCAAAAGATGGCTTCAAG...TAGACCTTTGTCGACCGTTTGCTGCTCACTGCATTGGATACCCTGTGGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
||
| 3UTR CAA 72 bp | CGATATTCTATCTCTGGCAACGTTGTGGACAGTTTTTaGTTGGCTGGGATGCCTCCGTTGTGGTGTATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYSISGNVVDSF*LAGMPPLWCIR Trigger: CCTTATACACCACAACGGAGGCATCCCAGCCAACAAAAAACTGTCCACAACGTTGCCAGAGATAGAATATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137707.8 ENSMUST00000148595.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGATACACATGCCAATCAACAGGAAATTTTAGAGCCATGTCCTTTCAGAACTGCTTCTGCAACATTTaGTGCTCTGGAGGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MRYTCQSTGNFRAMSFQNCFCNI*CSGGRA Trigger: GGCCCTCCCTCCAGAGCAGCAAATGTTGCAGAAGCA...GTTCTGAAAGGACATGGCTCTAAAATTTCCTGTTGATTGGCATGTGTATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | ATGAGATACACATGCCAATCAACAGGAAATTTTAGAGCCATGTCCTTTCAGAACTCGGGCCCTTGCTGGTaGACTTCTGCTTCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MRYTCQSTGNFRAMSFQNSGPCW*TSASSR Trigger: ACGAGAAGAAGCAGAAGTGCACCAGCAAGGGCCCGA...GTTCTGAAAGGACATGGCTCTAAAATTTCCTGTTGATTGGCATGTGTATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCAAAGCTTCGGGCTTCCTaGTCAGCCTTTAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSKLRAS*SAFSFF Trigger: GAAGAAGCTAAAGGCTGAGCAGGAAGCCCGAAGCTT...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | ATGAGATACACATGCCAATCAACAGGAAATTTTAGAGCCATGTCCTTTCAGAACGCACTCTCCCCTAGATaGAGCAGCAAAGGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRYTCQSTGNFRAMSFQNALSPR*SSKGNS Trigger: GCTGTTGCCTTTGCTGCTGCATCTAGGGGAGAGTGC...GTTCTGAAAGGACATGGCTCTAAAATTTCCTGTTGATTGGCATGTGTATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCAAACCAGGGATGCCTCCGTTGTaGTGTATAAGGATCGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MEAKSNRSGFSISPAFKPGMPPL*CIRIEE Trigger: TTCCTCGATCCTTATACACCACAACGGAGGCATCCC...TGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| 3UTR CAA 72 bp | TTAATGTCTTGTTCCAGCCTTACCAGCGCGTCTGGTTaGCTCAGCTGGTTGTTAGGAATACAGTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LMSCSSLTSASG*LSWLLGIQFSI Trigger: AATGGAGAACTGTATTCCTAACAACCAGCTGAGCAAACCAGACGCGCTGGTAAGGCTGGAACAAGACATTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAAAAAGAGGATCCAGAGTaGCACTGTAGGCAAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: KMTQNANGDNMHTWLKLEKEDPE*HCRQTH Trigger: GTGTGTTTGCCTACAGTGTCACTCTGGATCCTCTTT...TTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | TCTCTCAATCTGTCTGGTCCTTGGAGGGCCGATCCCTCTTTTCTCTGTAATATAAGCTCACATAACTTTTaGAGCCAAAGCCCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLNLSGPWRADPSFLCNISSHNF*SQSPKS Trigger: TGACTTTGGGCTTTGGCTTCAAAAGTTATGTGAGCT...TATATTACAGAGAAAAGAGGGATCGGCCCTCCAAGGACCAGACAGATTGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR TCA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCACTTTCATGTCCATTGTaGGCTTCTTGCCCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSLSCPL*ASCPQL Trigger: AAGCTGAGGGCAAGAAGCTCACAATGGACATGAAAG...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCATCCTTCTCCTGCTTCTaGAACATTTGCTGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSSFSCF*NICCSG Trigger: TCCAGAGCAGCAAATGTTGCAGAAGCAGGAGAAGGA...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | TTTAACGAAAACAGTGTCCCAAAGGCAGCAGAATGGGGGAAACCTCATCAACACTTCTCCTCCATTAGCTaGTTTTCTACAAAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FNENSVPKAAEWGKPHQHFSSIS*FSTKLR Trigger: CCGAAGCTTTGTAGAAAAGCAGCTAATGGAGGAGAA...GTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTGGGACACTGTTTTCGTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTTCTCGTTTTTACTAGACGAGGAAGGAATGCTTCCATTTGTAGCGCTGGTGTGCCATACGTACTaGACCCATACATATGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CFFSFLLDEEGMLPFVALVCHTY*THTYVL Trigger: TAGCACATATGTATGGGTCCAGTACGTATGGCACAC...CAGCGCTACAAATGGAAGCATTCCTTCCTCGTCTAGTAAAAACGAGAAGAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCAATCTGTCTGGTCCTTGGAGGGCCGATCCCTCTTTTCTCTGTAATATATCTGTTTTAGGTCCTTaGTTTCCTGGTCTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNLSGPWRADPSFLCNISVLGP*FPGLSE Trigger: TTCAGAAAGACCAGGAAATCAAGGACCTAAAACAGA...TATATTACAGAGAAAAGAGGGATCGGCCCTCCAAGGACCAGACAGATTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | ATGAGATACACATGCCAATCAACAGGAAATTTTAGAGCCATGTCCTTTCAGAACGGCAAGGAGGACAAGTaGCCACACTACCAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: MRYTCQSTGNFRAMSFQNGKEDK*PHYQEF Trigger: AAATTCCTGGTAGTGTGGGCACTTGTCCTCCTTGCC...GTTCTGAAAGGACATGGCTCTAAAATTTCCTGTTGATTGGCATGTGTATCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
||
| CDS-3UTR GCA 90 bp | TCCTTGGCACAAGAGCTGAGGAACTGTCAGACATCTGTAAACCATCAAACTCCATTCTGCTTGTCTTTTTaGTTCATTTGCACGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLAQELRNCQTSVNHQTPFCLSF*FICTAL Trigger: CAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAA...TGGAGTTTGATGGTTTACAGATGTCTGACAGTTCCTCAGCTCTTGTGCCAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CCA 90 bp | TTTAACGAAAACAGTGTCCCAAAGGCAGCAGAATGGGGGAAACCTCATCAACACTCGATATTCTATCTCTaGCAACGTTGTGGACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNENSVPKAAEWGKPHQHSIFYL*QRCGQF Trigger: AAACTGTCCACAACGTTGCCAGAGATAGAATATCGA...GTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTGGGACACTGTTTTCGTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| 3UTR CAA 72 bp | GCCTTTAGCTTCTTCTCTAGCTGGCTGATATTCTGCTaGTCTTTTTGCTTCATTTGCACGGCATTGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFSFFSSWLIFC*SFCFICTALCN Trigger: GTTACACAATGCCGTGCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCAGCTAGAGAAGAAGCTAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137707.8 |
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| CDS-3UTR GCA 90 bp | AAGATGACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAATTGCTGGTGCACTTCTaGTTCTTCTCGTTTTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: KMTQNANGDNMHTWLKLELLVHF*FFSFLL Trigger: TAGTAAAAACGAGAAGAAGCAGAAGTGCACCAGCAA...TTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CCA 90 bp | CCTTCTGAACTTCCTTCTGCTTCCTTAACCGCATTTTGTAGCTCACATAACTTTCATCTTTTGGAAGCATaGATTTGCTCTGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSELPSASLTAFCSSHNFHLLEA*ICSDQS Trigger: GCTTTGGTCAGAGCAAATCCATGCTTCCAAAAGATG...AAAGTTATGTGAGCTACAAAATGCGGTTAAGGAAGCAGAAGGAAGTTCAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148595.2 |
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| CDS-3UTR CCA 90 bp | ATGAGATACACATGCCAATCAACAGGAAATTTTAGAGCCATGTCCTTTCAGAACTCTGGTTTGCTCAGCTaGTTGTTAGGAATACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MRYTCQSTGNFRAMSFQNSGLLS*LLGIQF Trigger: GAACTGTATTCCTAACAACCAGCTGAGCAAACCAGA...GTTCTGAAAGGACATGGCTCTAAAATTTCCTGTTGATTGGCATGTGTATCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | TCTCAATTTCCCCAGCTTTCAAACCAGATCTCTGCTTTGCCCGTCCTCTCTCTCCTGACTGCGCAGCTCTaGCTCCACTTGCCGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQFPQLSNQISALPVLSLLTAQL*LHLPAG Trigger: GCCAGCCGGCAAGTGGAGCAAGAGCTGCGCAGTCAG...GAGAGAGAGGACGGGCAAAGCAGAGATCTGGTTTGAAAGCTGGGGAAATTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS GCA 90 bp | AATTTGCCCCTGGGCAATCTCCAGCTGCCGCTTTGCATCACCAAGTaGAGAGAAGAGGTCCAGCTTGATCCTCGTCTCTGCGCTGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: NLPLGNLQLPLCITK*REEVQLDPRLCAET Trigger: AGTCTCAGCGCAGAGACGAGGATCAAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGAGATTGCCCAGGGGCAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS GCA 90 bp | CTCGTCTCTGCGCTGAGACTGTTCTCTAGGTGTTGCGTTTTGTCTTaGATGGCGGAGAGGGCTGACATCAATACCTCGGTGTCCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVSALRLFSRCCVLS*MAERADINTSVSFS Trigger: CGAGAAGGACACCGAGGTATTGATGTCAGCCCTCTCCGCCATGCAAGACAAAACGCAACACCTAGAGAACAGTCTCAGCGCAGAGACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS GCA 90 bp | GTCTTTCTGAAGAATTTGCCCCTGGGCAATCTCCAGCTGCCGCTTTaGATCACCAAGTGCAGAGAAGAGGTCCAGCTTGATCCTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VFLKNLPLGNLQLPL*ITKCREEVQLDPRL Trigger: GAGACGAGGATCAAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGAGATTGCCCAGGGGCAAATTCTTCAGAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | TTTAACGAAAACAGTGTCCCAAAGGCAGCAGAATGGGGGAAACCTCATCAACACCAGCTCTTGCTCCACTaGCCGGCTGGCTTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNENSVPKAAEWGKPHQHQLLLH*PAGLQV Trigger: GACCTGCAAGCCAGCCGGCAAGTGGAGCAAGAGCTG...GTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTGGGACACTGTTTTCGTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | CTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTTTCTCCATTAAGTCCTaGTGTGCACTCGGGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LELTAMGMAILQTHRHTPFSIKS*CALGPL Trigger: CAAGGGCCCGAGTGCACACAAGGACTTAATGGAGAA...AGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | CACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCGCTGGGATGCCTCCGTaGTGGTGTATAAGGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSMEAKSNRSGFSISPAFAGMPP*WCIRIE Trigger: CTCGATCCTTATACACCACAACGGAGGCATCCCAGC...GAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | TCTAGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCCCAAGGTTGTGTTTCTaGGCATCCTTGTCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRANSDGNGNTPNTPSHAPRLCF*ASLSFS Trigger: AGAGAAGGACAAGGATGCCAAGAAACACAACCTTGG...GGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAGCCAAGACCAAGTTTAACGAAAACAGTGTCCCAAAGGCAGCAGAAGAGAAGAGGTCCAGCTaGATCCTCGTCTCTGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNAAKTKFNENSVPKAAEEKRSS*ILVSAL Trigger: CAGCGCAGAGACGAGGATCAAGCTGGACCTCTTCTC...TTCTGCTGCCTTTGGGACACTGTTTTCGTTAAACTTGGTCTTGGCTGCATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | CAAAGGCAGCAGAATGGGGGAAACCTCATCAACACAGTGACAATTTTCCATGTTTCTCCAGCTGCCGCTTaGCATCACCAAGTGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQQNGGNLINTVTIFHVSPAAA*HHQVQR Trigger: TCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGAGA...AACATGGAAAATTGTCACTGTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS TCA 90 bp | AATACCTCGGTGTCCTTCTCGTTTTCTTTGTACTTCCGAAGCTCCTaGACCTTCAGTTCCAGTTCCCTGATCTGCTCCTCCTTCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NTSVSFSFSLYFRSS*TFSSSSLICSSFTF Trigger: GAAAGTGAAGGAGGAGCAGATCAGGGAACTGGAACTGAAGGTTCAGGAGCTTCGGAAGTACAAAGAAAACGAGAAGGACACCGAGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | CACAGCATGGAAGCAAAGTCAAATCGATCTGGCTTCTCAATTTCCCCAGCTTTCACGGCATTGTGTAACTaGTTCTGCAGCAGCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSMEAKSNRSGFSISPAFTALCN*FCSSSF Trigger: GAACGAGCTGCTGCAGAACAAGTTACACAATGCCGT...GAAAGCTGGGGAAATTGAGAAGCCAGATCGATTTGACTTTGCTTCCATGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | AGAGCTAACAGCGATGGGAATGGCAATACTCCAAACACACCGTCACACGCCTGCTTATTTATTCCAAGGTaGTGTTTCTTGGCATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RANSDGNGNTPNTPSHACLFIPR*CFLASL Trigger: CAAGGATGCCAAGAAACACAACCTTGGAATAAATAA...GCAGGCGTGTGACGGTGTGTTTGGAGTATTGCCATTCCCATCGCTGTTAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | TCTCTCAATCTGTCTGGTCCTTGGAGGGCCGATCCCTCTTTTCTCTGTAATATAGGTTTGCTCAGCTGGTaGTTAGGAATACAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLNLSGPWRADPSFLCNIGLLSW*LGIQFS Trigger: GGAGAACTGTATTCCTAACAACCAGCTGAGCAAACC...TATATTACAGAGAAAAGAGGGATCGGCCCTCCAAGGACCAGACAGATTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | AAGATGACTCAAAATGCAAATGGCGACAACATGCACACCTGGCTAAAGCTAGAATCTAGGTGTTGCGTTTaGTCTTGCATGGCGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMTQNANGDNMHTWLKLESRCCV*SCMAER Trigger: CCTCTCCGCCATGCAAGACAAAACGCAACACCTAGA...TTCTAGCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | CAAAGGCAGCAGAATGGGGGAAACCTCATCAACACAGTGACAATTTTCCATGTTGTCTTTCTGAAGAATTaGCCCCTGGGCAATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRQQNGGNLINTVTIFHVVFLKN*PLGNLQ Trigger: CTGGAGATTGCCCAGGGGCAAATTCTTCAGAAAGAC...AACATGGAAAATTGTCACTGTGTTGATGAGGTTTCCCCCATTCTGCTGCCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | GATCTGGCTTCTCAATTTCCCCAGCTTTCAAACCAGATCTCTGCTTTGCCCGTCCATATACTCAATCTCTaGTATCTTAGAGTCTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLASQFPQLSNQISALPVHILNL*YLRVYR Trigger: CCTGTAGACTCTAAGATACAAGAGATTGAGTATATG...GACGGGCAAAGCAGAGATCTGGTTTGAAAGCTGGGGAAATTGAGAAGCCAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS-3UTR CAA 90 bp | CCAACCTATAGTACACAGCTGAACCAGGATCTTTGTGCAGAGTTTAAGTCTTCATGGCTGATATTCTGCTaGTCTTTTTGCTTCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PTYSTQLNQDLCAEFKSSWLIFC*SFCFIC Trigger: GCAAATGAAGCAAAAAGACAAGCAGAATATCAGCCA...TGAAGACTTAAACTCTGCACAAAGATCCTGGTTCAGCTGTGTACTATAGGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS GCA 72 bp | CTGGGCAATCTCCAGCTGCCGCTTTGCATCACCAAGTaGAGAGAAGAGGTCCAGCTTGATCCTCGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGNLQLPLCITK*REEVQLDPRLC Trigger: GCAGAGACGAGGATCAAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGAGATTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS TCA 72 bp | TCAGGTATAAAAATGTACTGCCGTAGATACCCTCGGTaGTCCGGTTCCGCTTCAGGGGGCGGCGGAGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SGIKMYCRRYPR*SGSASGGGGAY Trigger: GTAAGCTCCGCCGCCCCCTGAAGCGGAACCGGATCACCGAGGGTATCTACGGCAGTACATTTTTATACCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030628.15 ENSMUST00000137707.8 ENSMUST00000148595.2 |
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| CDS CAA 90 bp | TCCAGCTGCCGCTTTGCATCACCAAGTGCAGAGAAGAGGTCCAGCTaGATCCTCGTCTCTGCGCTGAGACTGTTCTCTAGGTGTTGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSCRFASPSAEKRSS*ILVSALRLFSRCCV Trigger: AACGCAACACCTAGAGAACAGTCTCAGCGCAGAGACGAGGATCAAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS GCA 72 bp | GCGCTGAGACTGTTCTCTAGGTGTTGCGTTTTGTCTTaGATGGCGGAGAGGGCTGACATCAATACCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALRLFSRCCVLS*MAERADINTSV Trigger: CACCGAGGTATTGATGTCAGCCCTCTCCGCCATGCAAGACAAAACGCAACACCTAGAGAACAGTCTCAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS CAA 72 bp | CGCTTTGCATCACCAAGTGCAGAGAAGAGGTCCAGCTaGATCCTCGTCTCTGCGCTGAGACTGTTCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFASPSAEKRSS*ILVSALRLFSR Trigger: CCTAGAGAACAGTCTCAGCGCAGAGACGAGGATCAAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS CAA 90 bp | TTGATCCTCGTCTCTGCGCTGAGACTGTTCTCTAGGTGTTGCGTTTaGTCTTGCATGGCGGAGAGGGCTGACATCAATACCTCGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LILVSALRLFSRCCV*SCMAERADINTSVS Trigger: GGACACCGAGGTATTGATGTCAGCCCTCTCCGCCATGCAAGACAAAACGCAACACCTAGAGAACAGTCTCAGCGCAGAGACGAGGATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS GCA 72 bp | AAGAATTTGCCCCTGGGCAATCTCCAGCTGCCGCTTTaGATCACCAAGTGCAGAGAAGAGGTCCAGCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KNLPLGNLQLPL*ITKCREEVQLD Trigger: ATCAAGCTGGACCTCTTCTCTGCACTTGGTGATGCAAAGCGGCAGCTGGAGATTGCCCAGGGGCAAATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS CAA 72 bp | GTCTCTGCGCTGAGACTGTTCTCTAGGTGTTGCGTTTaGTCTTGCATGGCGGAGAGGGCTGACATCAATACC | + |
|
Preference number: 6 (lower is better) Translates to: VSALRLFSRCCV*SCMAERADINT Trigger: GGTATTGATGTCAGCCCTCTCCGCCATGCAAGACAAAACGCAACACCTAGAGAACAGTCTCAGCGCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS CAA 90 bp | TCCCTGATCTGCTCCTCCTTCACTTTCATGTCCATTGTGAGCTTCTaGCCCTCAGCTTCTAGCTCTCTGATCCGACTCCGTAAGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLICSSFTFMSIVSF*PSASSSLIRLRKVS Trigger: GGAAACCTTACGGAGTCGGATCAGAGAGCTAGAAGCTGAGGGCAAGAAGCTCACAATGGACATGAAAGTGAAGGAGGAGCAGATCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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| CDS CAA 72 bp | TGCTCCTCCTTCACTTTCATGTCCATTGTGAGCTTCTaGCCCTCAGCTTCTAGCTCTCTGATCCGACTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CSSFTFMSIVSF*PSASSSLIRLR Trigger: ACGGAGTCGGATCAGAGAGCTAGAAGCTGAGGGCAAGAAGCTCACAATGGACATGAAAGTGAAGGAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030628.15 |
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