Pregenerated sensors for MACIR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044768Ensembl transcript IDs: ENSMUST00000053033.14, ENSMUST00000142234.2, ENSMUST00000149927.2, ENSMUST00000153115.8
Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGAGGGAGGGAGGGCGGGCGGGCGGGCAAAGAAGGGCCTCTCTTaGATGTACCTGGAACAGACTCTCCACTACATAGTAGTCCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: GEGGRAGGRAKKGLS*MYLEQTLHYIVVQR Trigger: CCTTTGGACTACTATGTAGTGGAGAGTCTGTTCCAGGTACATCCAAGAGAGGCCCTTCTTTGCCCGCCCGCCCGCCCTCCCTCCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | TTCTGCGCATGGAGCTGTGACAAGCTGGCTGGCCCTGAGGCTGCATaGACACCTGGGGGAAGGAGCGCTGTAACTGAGGACACAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: FCAWSCDKLAGPEAA*TPGGRSAVTEDTKA Trigger: AGCCTTTGTGTCCTCAGTTACAGCGCTCCTTCCCCCAGGTGTGCATGCAGCCTCAGGGCCAGCCAGCTTGTCACAGCTCCATGCGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | TGCTGTCCTTGCATGACCCTGACACCGCCTGAGCAGCATCTGAGGTaGAGACTGTGTGACGCTGTCCGTCTCGCTCAGACGACAGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: CCPCMTLTPPEQHLR*RLCDAVRLAQTTAL Trigger: AAGGGCTGTCGTCTGAGCGAGACGGACAGCGTCACACAGTCTCCACCTCAGATGCTGCTCAGGCGGTGTCAGGGTCATGCAAGGACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | TGTGCTGAGCAGACCCTCTGGGAGTCAGTGCCCACTGCCCAGCACTaGGCACCACACTATGTGCTTCACCTGGGCATCTCATTCCATCCC | + |
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Preference number: 1 (lower is better) Translates to: CAEQTLWESVPTAQH*APHYVLHLGISFHP Trigger: GGGATGGAATGAGATGCCCAGGTGAAGCACATAGTGTGGTGCCCAGTGCTGGGCAGTGGGCACTGACTCCCAGAGGGTCTGCTCAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | TCTACCATGGGAGTCCTGGGAATCAAACTCGGGTGGTCAGGCAACTaGCTTTACCAGCCGAGCCATCTCCCCAACCCCTTGGGTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: STMGVLGIKLGWSGN*LYQPSHLPNPLGGV Trigger: GACTCCACCCAAGGGGTTGGGGAGATGGCTCGGCTGGTAAAGGCAGTTGCCTGACCACCCGAGTTTGATTCCCAGGACTCCCATGGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | TCTGGGAGTCAGTGCCCACTGCCCAGCACTGGGCACCACACTATGTaGTTCACCTGGGCATCTCATTCCATCCCTCCTAACAGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SGSQCPLPSTGHHTM*FTWASHSIPPNSPA Trigger: AGCTGGGCTGTTAGGAGGGATGGAATGAGATGCCCAGGTGAAGCACATAGTGTGGTGCCCAGTGCTGGGCAGTGGGCACTGACTCCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | TGGTTCTCCCCTTCTACCATGGGAGTCCTGGGAATCAAACTCGGGTaGTCAGGCAACTGCCTTTACCAGCCGAGCCATCTCCCCAACCCC | + |
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Preference number: 1 (lower is better) Translates to: WFSPSTMGVLGIKLG*SGNCLYQPSHLPNP Trigger: GGGGTTGGGGAGATGGCTCGGCTGGTAAAGGCAGTTGCCTGACCACCCGAGTTTGATTCCCAGGACTCCCATGGTAGAAGGGGAGAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | GTCCCAGACAACTTCAAGGAGGAGGGCAAACACCCTTCTCTGTGGTaGTCCCTGTACGTCAGCAGACTAGGCACGGTGCCTATGGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: VPDNFKEEGKHPSLW*SLYVSRLGTVPMAW Trigger: CCACGCCATAGGCACCGTGCCTAGTCTGCTGACGTACAGGGACCACCACAGAGAAGGGTGTTTGCCCTCCTCCTTGAAGTTGTCTGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | AAACCAAGTGAAGGGCAGAAACGGTTGTGTGCTGAGCAGACCCTCTaGGAGTCAGTGCCCACTGCCCAGCACTGGGCACCACACTATGTG | + |
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Preference number: 1 (lower is better) Translates to: KPSEGQKRLCAEQTL*ESVPTAQHWAPHYV Trigger: CACATAGTGTGGTGCCCAGTGCTGGGCAGTGGGCACTGACTCCCAGAGGGTCTGCTCAGCACACAACCGTTTCTGCCCTTCACTTGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | TGGTGGTCCCTGTACGTCAGCAGACTAGGCACGGTGCCTATGGCGTaGCATAGGGAAGACTTCACACTCACTCTCCCACCTGCCCATGTA | + |
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Preference number: 1 (lower is better) Translates to: WWSLYVSRLGTVPMA*HREDFTLTLPPAHV Trigger: TACATGGGCAGGTGGGAGAGTGAGTGTGAAGTCTTCCCTATGCCACGCCATAGGCACCGTGCCTAGTCTGCTGACGTACAGGGACCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | CAAGTCCCAGACAACTTCAAGGAGGAGGGCAAACACCCTTCTCTGTaGTGGTCCCTGTACGTCAGCAGACTAGGCACGGTGCCTATGGCG | + |
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Preference number: 1 (lower is better) Translates to: QVPDNFKEEGKHPSL*WSLYVSRLGTVPMA Trigger: CGCCATAGGCACCGTGCCTAGTCTGCTGACGTACAGGGACCACCACAGAGAAGGGTGTTTGCCCTCCTCCTTGAAGTTGTCTGGGACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | TCTGGCCCCAGAGCCCAGGCAGATGGTAAGGACGGCATCCATCTTTaGTCCTCATCTGAGATTTTGAGGTCCCGAGTGGACTCTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SGPRAQADGKDGIHL*SSSEILRSRVDSAS Trigger: AGAGGCAGAGTCCACTCGGGACCTCAAAATCTCAGATGAGGAGCAAAGATGGATGCCGTCCTTACCATCTGCCTGGGCTCTGGGGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAAGTGTGCACCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLPSAGIKSVHHH Trigger: GTGGTGGTGCACACTTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | CTTCAGGGAACCCAGCTCCTCCAGGTATGCTGCACACATATTCTGTaGGCAGACCAGGGCCTATTGCACAGCAGAGGGAAGCCTGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: LQGTQLLQVCCTHIL*ADQGLLHSRGKPVS Trigger: ACTAACAGGCTTCCCTCTGCTGTGCAATAGGCCCTGGTCTGCTCACAGAATATGTGTGCAGCATACCTGGAGGAGCTGGGTTCCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | CTCTCTTGGGGCTGGAGAGATGGCTCAGCATTTAAAAGCACTGACTaGTCCTCCAGAGGCCCTGAGTTCGATTCTCAGCAACCACGTGGT | + |
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Preference number: 1 (lower is better) Translates to: LSWGWRDGSAFKSTD*SSRGPEFDSQQPRG Trigger: ACCACGTGGTTGCTGAGAATCGAACTCAGGGCCTCTGGAGGAGCAGTCAGTGCTTTTAAATGCTGAGCCATCTCTCCAGCCCCAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | AGAGTAACCACTGAGGACAGCTCTCAGGTTCGTAACTGTAATGAGTaGCAACGCATCAGCAGTGAGACCACTCGGGCATTCCGCCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: RVTTEDSSQVRNCNE*QRISSETTRAFRPH Trigger: GTGAGGGCGGAATGCCCGAGTGGTCTCACTGCTGATGCGTTGGCACTCATTACAGTTACGAACCTGAGAGCTGTCCTCAGTGGTTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | CAGCCTGACCTCAGAGCCTTAACTCAAGAGACACAACTACAGGCTTaGTTCCATGCAAGCCATAAGGCAGCAGGAGCATGCAGCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: QPDLRALTQETQLQA*FHASHKAAGACSLR Trigger: CCTCAGGCTGCATGCTCCTGCTGCCTTATGGCTTGCATGGAAGCAAGCCTGTAGTTGTGTCTCTTGAGTTAAGGCTCTGAGGTCAGGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | AAGTGGCAGCATGCATGCGGAGGTCAGAGGACAACAGAAGAGAGTTaGTCCTCCCCTTCCGGCATATGGATTTTGGAGATGAAGCGCAGC | + |
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Preference number: 1 (lower is better) Translates to: KWQHACGGQRTTEES*SSPSGIWILEMKRS Trigger: GCTGCGCTTCATCTCCAAAATCCATATGCCGGAAGGGGAGGACCAACTCTCTTCTGTTGTCCTCTGACCTCCGCATGCATGCTGCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | GTGAGACAGGAAAGAGAGATTAATCCCAGGGCTCCCTGTATAATCTaGCATCGGCTCAACAGGTCTGGAGGGTCTCCTCTCCTCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VRQEREINPRAPCII*HRLNRSGGSPLLRA Trigger: AGCCCTGAGGAGAGGAGACCCTCCAGACCTGTTGAGCCGATGTCAGATTATACAGGGAGCCCTGGGATTAATCTCTCTTTCCTGTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | AGAGCCAGAAGCAGAGTGATGTCTTTCCCTGGACGCAAAGGTCACTaGTGTTTTCGTCCATTCATTCCAGCTGACCACGTCTCCCTACGC | + |
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Preference number: 1 (lower is better) Translates to: RARSRVMSFPGRKGH*CFRPFIPADHVSLR Trigger: GCGTAGGGAGACGTGGTCAGCTGGAATGAATGGACGAAAACAGCAGTGACCTTTGCGTCCAGGGAAAGACATCACTCTGCTTCTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | CGGGCATTCCGCCCTCACTCCCCAGCTCTGTACAAGATGCTTCAGTaGAGCTTACTAGGTAAATGTCACAGTTCCATGCCACATGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RAFRPHSPALYKMLQ*SLLGKCHSSMPHAS Trigger: TGAGGCATGTGGCATGGAACTGTGACATTTACCTAGTAAGCTGCACTGAAGCATCTTGTACAGAGCTGGGGAGTGAGGGCGGAATGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | TTCCCATCTGGAGCTGTCTTGGAAATCATCATGCTCTCAGATTCCTaGTGTCCTTGCATGACCCTGACACCGCCTGAGCAGCATCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: FPSGAVLEIIMLSDS*CPCMTLTPPEQHLR Trigger: CCTCAGATGCTGCTCAGGCGGTGTCAGGGTCATGCAAGGACAGCAGGAATCTGAGAGCATGATGATTTCCAAGACAGCTCCAGATGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | CAGGGCAAAACCCTGCCTGAGGATCTAGAGCCAGTTTCCGCTTGCTaGGGAAGGTGTGGTTTTCTTCTGTGTGTAAACTGGCCACACTTC | + |
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Preference number: 1 (lower is better) Translates to: QGKTLPEDLEPVSAC*GRCGFLLCVNWPHF Trigger: GAAGTGTGGCCAGTTTACACACAGAAGAAAACCACACCTTCCCCAGCAAGCGGAAACTGGCTCTAGATCCTCAGGCAGGGTTTTGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | TGCAGACGAACTAGACCACTAATGCTTTCCTTGTCTGTGTCACCGTaGGACATGGGCTACCATCTCAGACCTGCCTGCAATACCCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: CRRTRPLMLSLSVSP*DMGYHLRPACNTQC Trigger: GCACTGGGTATTGCAGGCAGGTCTGAGATGGTAGCCCATGTCCCACGGTGACACAGACAAGGAAAGCATTAGTGGTCTAGTTCGTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | TCCAGTCCTTTAGCAAAATACCGACACAAGTCAGCAGCTGCAGTCTaGTCCACTCAGCAGTCACCCCTCATGAATCAGCGATGGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSPLAKYRHKSAAAV*STQQSPLMNQRWQA Trigger: GGCTTGCCATCGCTGATTCATGAGGGGTGACTGCTGAGTGGACCAGACTGCAGCTGCTGACTTGTGTCGGTATTTTGCTAAAGGACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | CCACCTATCCCTGTGTCAGACAGGTCTTCATCCTCCCTAATGCCTTaGCCCTTTAACACCGTTCCCCATGTGAGGGAACCTCAAGCCATA | + |
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Preference number: 1 (lower is better) Translates to: PPIPVSDRSSSSLMP*PFNTVPHVREPQAI Trigger: TATGGCTTGAGGTTCCCTCACATGGGGAACGGTGTTAAAGGGTCAAGGCATTAGGGAGGATGAAGACCTGTCTGACACAGGGATAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | GTCTTTACAGCCCAGCTTCTTCTCAAGAATTCCTCTTTCCAGAGGTaGGTGGGGCTGGAAGAGCACCTGAGGCTGAATTCTGGCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: VFTAQLLLKNSSFQR*VGLEEHLRLNSGMH Trigger: GTGCATGCCAGAATTCAGCCTCAGGTGCTCTTCCAGCCCCACTCACCTCTGGAAAGAGGAATTCTTGAGAAGAAGCTGGGCTGTAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | GACACAAAGGCTATTCCAGGTTACTTCCTAGGGCCTACAACAGCCTaGCAAAGCTTCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: DTKAIPGYFLGPTTA*QSFSTPQSRLPLFP Trigger: AGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGAAGCTTTGGCAGGCTGTTGTAGGCCCTAGGAAGTAACCTGGAATAGCCTTTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | CAGCCCACGGACAAGCATTTAAACACAGGGAGAGAAGGACTCTCTTaGGGCTGGAGAGATGGCTCAGCATTTAAAAGCACTGACTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: QPTDKHLNTGREGLS*GWRDGSAFKSTDCS Trigger: GGAGCAGTCAGTGCTTTTAAATGCTGAGCCATCTCTCCAGCCCCAAGAGAGTCCTTCTCTCCCTGTGTTTAAATGCTTGTCCGTGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | CCCTGGACGCAAAGGTCACTGCTGTTTTCGTCCATTCATTCCAGCTaGCCACGTCTCCCTACGCTGACTGTCCCATTTAGAGAACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: PWTQRSLLFSSIHSS*PRLPTLTVPFRELK Trigger: TTTGAGTTCTCTAAATGGGACAGTCAGCGTAGGGAGACGTGGTCAGCTGGAATGAATGGACGAAAACAGCAGTGACCTTTGCGTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | ATCCCATCCCAGCACCCCATCAAGTCAGGTGCCAAGGACACTAACTaGATTACAGTTCCCACCCTACTCACACAGTTAAAGCACAGATGC | + |
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Preference number: 1 (lower is better) Translates to: IPSQHPIKSGAKDTN*ITVPTLLTQLKHRC Trigger: GCATCTGTGCTTTAACTGTGTGAGTAGGGTGGGAACTGTAATGCAGTTAGTGTCCTTGGCACCTGACTTGATGGGGTGCTGGGATGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | GTGTCCCTGCAAGAGTCCCTAAGTCAGGAGAAACAAATTCCGTGCTaGGGTCACAGGCGCACAAATAGGAACTGTGCTAATGCTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VSLQESLSQEKQIPC*GHRRTNRNCANAPE Trigger: TTCTGGAGCATTAGCACAGTTCCTATTTGTGCGCCTGTGACCCCAGCACGGAATTTGTTTCTCCTGACTTAGGGACTCTTGCAGGGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | CCTCTCTCCTGGGCCTATTGGACCACAAGTTTATGTAGCCAGGAATaGGGTCATCACGAATTTCTGGTCCTCCACCCTTGTTCATGGATG | + |
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Preference number: 1 (lower is better) Translates to: PLSWAYWTTSLCSQE*GHHEFLVLHPCSWM Trigger: CATCCATGAACAAGGGTGGAGGACCAGAAATTCGTGATGACCCCATTCCTGGCTACATAAACTTGTGGTCCAATAGGCCCAGGAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAAGGAGATCTaGCTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTIRKEI*LPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTCCTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | GAAAAGGACCGCGATGTCATCCTGTGCAACAGCTGCAACTTACAGTaGAACCTCTTCACTCCCCTCCCTACAGTGATTGCATCTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: EKDRDVILCNSCNLQ*NLFTPLPTVIASAR Trigger: TCTTGCAGATGCAATCACTGTAGGGAGGGGAGTGAAGAGGTTTCACTGTAAGTTGCAGCTGTTGCACAGGATGACATCGCGGTCCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | GTTATGAACCACAGTGTAAATACATCATATCCAGGACATCTGCTATaGAACCTCCAAAGGGGCCGAGACCCACAGGTTGAGAACCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: VMNHSVNTSYPGHLL*NLQRGRDPQVENPC Trigger: GCAGGGGTTCTCAACCTGTGGGTCTCGGCCCCTTTGGAGGTTGCATAGCAGATGTCCTGGATATGATGTATTTACACTGTGGTTCATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | AAAGGAAAGCTTCCCTGCAGAGTGGAATGTTTCAAGTGGAGAAACTaGTACTCAACACTACCAAGGGAGGGCTCAGCAAGAGGCAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: KGKLPCRVECFKWRN*YSTLPREGSARGKP Trigger: AGGCTTGCCTCTTGCTGAGCCCTCCCTTGGTAGTGTTGAGTAGCAGTTTCTCCACTTGAAACATTCCACTCTGCAGGGAAGCTTTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | CTCAAAACAGCACCTGACTTCCTCTGTCATCTGTGTTCAGTGTCCTaGTGGTTCTCCATGCTTGTCTCCCACACAAGTCCCAGACAACTT | + |
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Preference number: 1 (lower is better) Translates to: LKTAPDFLCHLCSVS*WFSMLVSHTSPRQL Trigger: AAGTTGTCTGGGACTTGTGTGGGAGACAAGCATGGAGAACCAGCAGGACACTGAACACAGATGACAGAGGAAGTCAGGTGCTGTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | AACCCTCGAAAGGACTTCACTAAGTGGCCTGTCTTGCCATCCTCCTaGATCTTGTACTTTAGGAGCACGAAGCACAAGATGTGGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: NPRKDFTKWPVLPSS*ILYFRSTKHKMWAD Trigger: ATCTGCCCACATCTTGTGCTTCGTGCTCCTAAAGTACAAGATCCAGGAGGATGGCAAGACAGGCCACTTAGTGAAGTCCTTTCGAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | CAAAAGCAAAAAGTTCAAAGCTCTTCCTCCAGCGTAGGCCAGCCATaGGCCCTAAAGGAGTTCACTGACTGCATAGGTACCCTCTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: QKQKVQSSSSSVGQP*ALKEFTDCIGTLFH Trigger: ATGGAAGAGGGTACCTATGCAGTCAGTGAACTCCTTTAGGGCTCATGGCTGGCCTACGCTGGAGGAAGAGCTTTGAACTTTTTGCTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | TCAAATAGCACATGCCTCAAACAACCCTGTATGGTTGAAGGCACATaGCCTAGCTTCTCCGGCACTCTGACACTGCTTTCTACCTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: SNSTCLKQPCMVEGT*PSFSGTLTLLSTSD Trigger: GTCAGAGGTAGAAAGCAGTGTCAGAGTGCCGGAGAAGCTAGGTCATGTGCCTTCAACCATACAGGGTTGTTTGAGGCATGTGCTATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | TTTGTGGCTAGACATTTTGGAGGTCATTATGCTTGCCCAGGGTCATaGAGGGTCACTCATCTGGAAAGTAGTGTCCTCATAAGAGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: FVARHFGGHYACPGS*RVTHLESSVLIRGR Trigger: CCGGCCTCTTATGAGGACACTACTTTCCAGATGAGTGACCCTTCATGACCCTGGGCAAGCATAATGACCTCCAAAATGTCTAGCCACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR TCA 90 bp | ACAGCTGCAACTTACAGTGAAACCTCTTCACTCCCCTCCCTACAGTaGTTGCATCTGCAAGACAAACTGATTCTCCAGCCTGACCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: TAATYSETSSLPSLQ*LHLQDKLILQPDLR Trigger: TCTGAGGTCAGGCTGGAGAATCAGTTTGTCTTGCAGATGCAATCACTGTAGGGAGGGGAGTGAAGAGGTTTCACTGTAAGTTGCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | GGCCTACAACAGCCTGCCAAAGCTTCTCAACGCCCCAATCAAGACTaGCTCTCTTCCCTAATGAGTGTGTCTCTTGAAATTGCTTACTTG | + |
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Preference number: 1 (lower is better) Translates to: GLQQPAKASQRPNQD*LSSLMSVSLEIAYL Trigger: CAAGTAAGCAATTTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGAAGCTTTGGCAGGCTGTTGTAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR GCA 90 bp | ACCTGCACGCCAGAGCACACTTCCACATTCTCACACACAACCAAATaGATTGGTATGGCTAAATCTCCTCCTGTCTCGTTCCGTTCACAA | + |
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Preference number: 1 (lower is better) Translates to: TCTPEHTSTFSHTTK*IGMAKSPPVSFRSQ Trigger: TTGTGAACGGAACGAGACAGGAGGAGATTTAGCCATACCAATGCATTTGGTTGTGTGTGAGAATGTGGAAGTGTGCTCTGGCGTGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | CCCAACGTAAGAAACACAAAACACACAAAACCAGAATTCGCGCATTaGCACTTGCGCGAGGCCACTTACCTGCTTGTAGACAAAGGATGC | + |
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Preference number: 1 (lower is better) Translates to: PNVRNTKHTKPEFAH*HLREATYLLVDKGC Trigger: GCATCCTTTGTCTACAAGCAGGTAAGTGGCCTCGCGCAAGTGCCAATGCGCGAATTCTGGTTTTGTGTGTTTTGTGTTTCTTACGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CCA 90 bp | AAAACAGCACCTGACTTCCTCTGTCATCTGTGTTCAGTGTCCTGCTaGTTCTCCATGCTTGTCTCCCACACAAGTCCCAGACAACTTCAA | + |
|
Preference number: 1 (lower is better) Translates to: KTAPDFLCHLCSVSC*FSMLVSHTSPRQLQ Trigger: TTGAAGTTGTCTGGGACTTGTGTGGGAGACAAGCATGGAGAACCAGCAGGACACTGAACACAGATGACAGAGGAAGTCAGGTGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ATCCTAGAAAGAAACACCATGCCCGCCCACCAATGCCTTCATTTTTaGTTTCCTGGTTTCCAGAAGGGCAGGCGAGGGAATACAATTCTC | + |
|
Preference number: 1 (lower is better) Translates to: ILERNTMPAHQCLHF*FPGFQKGRRGNTIL Trigger: GAGAATTGTATTCCCTCGCCTGCCCTTCTGGAAACCAGGAAATCAAAAATGAAGGCATTGGTGGGCGGGCATGGTGTTTCTTTCTAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GCTAATATTTCAGCAGCCAGTCACAATTCAGATTTCCCTGACCACTaGAAATTGATTAATTGGCTTCTCATCCTCCCGCCCCCGACCCCA | + |
|
Preference number: 1 (lower is better) Translates to: ANISAASHNSDFPDH*KLINWLLILPPPTP Trigger: TGGGGTCGGGGGCGGGAGGATGAGAAGCCAATTAATCAATTTTCAGTGGTCAGGGAAATCTGAATTGTGACTGGCTGCTGAAATATTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | TCTGCCTCTTCACAGGAGTATATCCAAGTGCGAGAAAACATCTTCTaGCTCATGATGGCCAAAGATCACAGATGCCCAATGACTGGCCTA | + |
|
Preference number: 1 (lower is better) Translates to: SASSQEYIQVRENIF*LMMAKDHRCPMTGL Trigger: TAGGCCAGTCATTGGGCATCTGTGATCTTTGGCCATCATGAGGCAGAAGATGTTTTCTCGCACTTGGATATACTCCTGTGAAGAGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | ACCTTGTGGGTAAAAGAGATAGCTGCATCATTAAAGTGTGTGCCTTaGTATCACAAGGACCTGAGTGAGGTCCCCAGAGCACAGTTCAAC | + |
|
Preference number: 1 (lower is better) Translates to: TLWVKEIAASLKCVP*YHKDLSEVPRAQFN Trigger: GTTGAACTGTGCTCTGGGGACCTCACTCAGGTCCTTGTGATAGCAAGGCACACACTTTAATGATGCAGCTATCTCTTTTACCCACAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | CTTTTAAATATTTGTTTATTTAGGAGGCACGCACAAGTGGCAGCATaGATGCGGAGGTCAGAGGACAACAGAAGAGAGTTGGTCCTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: LLNICLFRRHAQVAA*MRRSEDNRRELVLP Trigger: GGGGAGGACCAACTCTCTTCTGTTGTCCTCTGACCTCCGCATGCATGCTGCCACTTGTGCGTGCCTCCTAAATAAACAAATATTTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | ACGGAGCATCGAGAAAGAATTCCTGAACACGAGTGTAGAACTACCTaGTGGAGAATGTCCAACTTACCCAGCAGACATCAACTGGCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: TEHRERIPEHECRTT*WRMSNLPSRHQLAR Trigger: TCTTGCCAGTTGATGTCTGCTGGGTAAGTTGGACATTCTCCAGCAGGTAGTTCTACACTCGTGTTCAGGAATTCTTTCTCGATGCTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | AGTAGGATTTCAAAACTAAACACAGACGGATTAAGAAAGAGTTCATaGCACCTACCACCAGCAAGGCTTCAGGGAACCCAGCTCCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SRISKLNTDGLRKSS*HLPPARLQGTQLLQ Trigger: CTGGAGGAGCTGGGTTCCCTGAAGCCTTGCTGGTGGTAGGTGCCATGAACTCTTTCTTAATCCGTCTGTGTTTAGTTTTGAAATCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | GAGCATCGAGAAAGAATTCCTGAACACGAGTGTAGAACTACCTGCTaGAGAATGTCCAACTTACCCAGCAGACATCAACTGGCAAGACCT | + |
|
Preference number: 1 (lower is better) Translates to: EHRERIPEHECRTTC*RMSNLPSRHQLARP Trigger: AGGTCTTGCCAGTTGATGTCTGCTGGGTAAGTTGGACATTCTCCAGCAGGTAGTTCTACACTCGTGTTCAGGAATTCTTTCTCGATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | AAGGGTTCTACTCTAGTCTCTTCTCCAAGAAAGATGAAGGTAAACTaGGATTTCCTGAGACACCAGTGGGTGCTGCAGCTTTGTGGCCTA | + |
|
Preference number: 1 (lower is better) Translates to: KGSTLVSSPRKMKVN*DFLRHQWVLQLCGL Trigger: TAGGCCACAAAGCTGCAGCACCCACTGGTGTCTCAGGAAATCCCAGTTTACCTTCATCTTTCTTGGAGAAGAGACTAGAGTAGAACCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | CGGTCTCCTGCGATCTGGCAACTGGAGTTACTTATTTTATACAGGTaGTCCCCAACTTCCTGTGATTCTATGGCAGCCTTGACTATGTTG | + |
|
Preference number: 1 (lower is better) Translates to: RSPAIWQLELLILYR*SPTSCDSMAALTML Trigger: CAACATAGTCAAGGCTGCCATAGAATCACAGGAAGTTGGGGACCACCTGTATAAAATAAGTAACTCCAGTTGCCAGATCGCAGGAGACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTCTaGTTTCACCAATTACAGGATTTCCCTCAGGGAGGTTTCCACACA | + |
|
Preference number: 1 (lower is better) Translates to: APEGRNYTACCTPPL*FHQLQDFPQGGFHT Trigger: TGTGTGGAAACCTCCCTGAGGGAAATCCTGTAATTGGTGAAATCAGAGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | TCAGCAACCACGTGGTGGCTCAAAACCATCTGTAATGGGATCCAATaGCCTCTTCTGGTGTGTCTAAAGACAGCTACAGTGTACTCATAT | + |
|
Preference number: 1 (lower is better) Translates to: SATTWWLKTICNGIQ*PLLVCLKTATVYSY Trigger: ATATGAGTACACTGTAGCTGTCTTTAGACACACCAGAAGAGGGCATTGGATCCCATTACAGATGGTTTTGAGCCACCACGTGGTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | CAGATTTCACTCCCAGAAGGCTCAAGTCCTCCTATCTTAGACTGCTaGCCATTCTATAAACACCTTAACCACCTATCCCTGTGTCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: QISLPEGSSPPILDC*PFYKHLNHLSLCQT Trigger: TGTCTGACACAGGGATAGGTGGTTAAGGTGTTTATAGAATGGGCAGCAGTCTAAGATAGGAGGACTTGAGCCTTCTGGGAGTGAAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | GTATCATTCCCTCCTGGGCATCCTCATCTCCTTCTCTCACTTGAATaGCTGGAGAGCTCCTTTTTAATCTCCAAGCTCAGTGTAGTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: VSFPPGHPHLLLSLE*LESSFLISKLSVVS Trigger: TGAAACTACACTGAGCTTGGAGATTAAAAAGGAGCTCTCCAGGCATTCAAGTGAGAGAAGGAGATGAGGATGCCCAGGAGGGAATGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | AAGAAACACCATGCCCGCCCACCAATGCCTTCATTTTTGATTTCCTaGTTTCCAGAAGGGCAGGCGAGGGAATACAATTCTCTCTTTAAG | + |
|
Preference number: 1 (lower is better) Translates to: KKHHARPPMPSFLIS*FPEGQAREYNSLFK Trigger: CTTAAAGAGAGAATTGTATTCCCTCGCCTGCCCTTCTGGAAACCAGGAAATCAAAAATGAAGGCATTGGTGGGCGGGCATGGTGTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | AATCCTACTACTCGACAAAAGACATTAGATGAAGACTTGTCACGGTaGCTCCAGAGAGAGAAAAGTTTGCTCCCACTCCTCCTCCCACTT | + |
|
Preference number: 1 (lower is better) Translates to: NPTTRQKTLDEDLSR*LQREKSLLPLLLPL Trigger: AAGTGGGAGGAGGAGTGGGAGCAAACTTTTCTCTCTCTGGAGCCACCGTGACAAGTCTTCATCTAATGTCTTTTGTCGAGTAGTAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | ATCATCAAATGTTTATTTTTGTCTGGAGGCGGGAGGTCAAGGGACTaGATAACATCCTGCCATGCCTATTTCTCACATGGCGTGTCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: IIKCLFLSGGGRSRD*ITSCHAYFSHGVSP Trigger: AGGAGACACGCCATGTGAGAAATAGGCATGGCAGGATGTTATCCAGTCCCTTGACCTCCCGCCTCCAGACAAAAATAAACATTTGATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | CAGAGCACACTTCCACATTCTCACACACAACCAAATGCATTGGTATaGCTAAATCTCCTCCTGTCTCGTTCCGTTCACAATCTCCCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: QSTLPHSHTQPNALV*LNLLLSRSVHNLPH Trigger: ATGAGGGAGATTGTGAACGGAACGAGACAGGAGGAGATTTAGCCATACCAATGCATTTGGTTGTGTGTGAGAATGTGGAAGTGTGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | AATTGCTGTCTCCCTAATCAAATAGCACTGTTTAAAAAGGCCACGTaGCTGACTTACCCCTTGCTGCACTCTGCAGTGTGGAAGCATACA | + |
|
Preference number: 1 (lower is better) Translates to: NCCLPNQIALFKKAT*LTYPLLHSAVWKHT Trigger: TGTATGCTTCCACACTGCAGAGTGCAGCAAGGGGTAAGTCAGTCACGTGGCCTTTTTAAACAGTGCTATTTGATTAGGGAGACAGCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TGCTGTTTTCGTCCATTCATTCCAGCTGACCACGTCTCCCTACGCTaGCTGTCCCATTTAGAGAACTCAAATTGGAAAATAGCTGTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: CCFRPFIPADHVSLR*LSHLENSNWKIAVL Trigger: AAGGACAGCTATTTTCCAATTTGAGTTCTCTAAATGGGACAGTCAGCGTAGGGAGACGTGGTCAGCTGGAATGAATGGACGAAAACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ACTTTCAGGTTCATCCATACATTACAAACACAAACGCAGAAGCTGTaGAGAGCCAGAAGCAGAGTGATGTCTTTCCCTGGACGCAAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: TFRFIHTLQTQTQKL*RARSRVMSFPGRKG Trigger: ACCTTTGCGTCCAGGGAAAGACATCACTCTGCTTCTGGCTCTTCACAGCTTCTGCGTTTGTGTTTGTAATGTATGGATGAACCTGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | CAAACTGACAGTCCTTCATCCCAGAGATACCACTGGAAATTCTGGTaGGTTGAAACTTCAAAGGGCTCCGTCAGGGAGACAGAAACTTTT | + |
|
Preference number: 1 (lower is better) Translates to: QTDSPSSQRYHWKFW*VETSKGSVRETETF Trigger: AAAAGTTTCTGTCTCCCTGACGGAGCCCTTTGAAGTTTCAACTCACCAGAATTTCCAGTGGTATCTCTGGGATGAAGGACTGTCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | CCACAAGGTAAGTCTCCATTCAGAGCTTGCTCACTAGATCCACTGTaGCTCGTTATCATCAAATGTTTATTTTTGTCTGGAGGCGGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: PQGKSPFRACSLDPL*LVIIKCLFLSGGGR Trigger: CCTCCCGCCTCCAGACAAAAATAAACATTTGATGATAACGAGTCACAGTGGATCTAGTGAGCAAGCTCTGAATGGAGACTTACCTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | TTGTGCCTCAGCCTAAGTGTTGGGATCACAGGTTATGAGCCATTGTaGCACATCATCTCAGTATTATGTCATTACAGGAGAGAGAGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: LCLSLSVGITGYEPL*HIISVLCHYRRERE Trigger: CTCTCTCTCTCTCCTGTAATGACATAATACTGAGATGATGTGGCACAATGGCTCATAACCTGTGATCCCAACACTTAGGCTGAGGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | AGCTCGACTCTTACAAATCCCATGTGTGAAGTGCATGTTATCTTCTaGAATAGGAACTTACCTTCAACCTCTGGGAGACAAGCCAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: SSTLTNPMCEVHVIF*NRNLPSTSGRQARA Trigger: TGCTCTGGCTTGTCTCCCAGAGGTTGAAGGTAAGTTCCTATTGCAGAAGATAACATGCACTTCACACATGGGATTTGTAAGAGTCGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | TCCCTGTCATTTCTAGGTGACAATCACAGCAAACATCCTAGTTTATaGTACTGTTCCCTGAGCCTTAGGTACAGGAGTTGTCTCGTAGAG | + |
|
Preference number: 1 (lower is better) Translates to: SLSFLGDNHSKHPSL*YCSLSLRYRSCLVE Trigger: CTCTACGAGACAACTCCTGTACCTAAGGCTCAGGGAACAGTACCATAAACTAGGATGTTTGCTGTGATTGTCACCTAGAAATGACAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GAAAAGATGGCTAAGTCTTCAACCCCCATCACTCCCACGGTGCTCTaGACAAGGGAAACACACAATGATGACACAGACTTACATTCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: EKMAKSSTPITPTVL*TRETHNDDTDLHSN Trigger: ATTTGAATGTAAGTCTGTGTCATCATTGTGTGTTTCCCTTGTTCAGAGCACCGTGGGAGTGATGGGGGTTGAAGACTTAGCCATCTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TTGTCTGGCAAGTTACTCTCTATGAAGTCACAAAGTCACGACAAGTaGAGATCAGCAACATGGTGCCAGGTGAAGCAATACAGACTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: LSGKLLSMKSQSHDK*RSATWCQVKQYRLA Trigger: TGCTAGTCTGTATTGCTTCACCTGGCACCATGTTGCTGATCTTCACTTGTCGTGACTTTGTGACTTCATAGAGAGTAACTTGCCAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GGTATGGCAGAGGCAGCACAAGGTTTTACAGCAGACATCTGTATTTaGCTTCCAACACCCAACTCAACAGCTAAACAACTAGAGACAGTT | + |
|
Preference number: 1 (lower is better) Translates to: GMAEAAQGFTADICI*LPTPNSTAKQLETV Trigger: AACTGTCTCTAGTTGTTTAGCTGTTGAGTTGGGTGTTGGAAGTCAAATACAGATGTCTGCTGTAAAACCTTGTGCTGCCTCTGCCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | CATGATAACAAGAAGCCAATGATAGGTGTTTCTATATGTTTCTCCTaGAGACTCTCTGCATTCTGCAAGAATCAGCTCACCCCAGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: HDNKKPMIGVSICFS*RLSAFCKNQLTPAA Trigger: AGCTGCTGGGGTGAGCTGATTCTTGCAGAATGCAGAGAGTCTGCAGGAGAAACATATAGAAACACCTATCATTGGCTTCTTGTTATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GGCAGAGGTAGAAGAGTCAAAGACTTTTCTAAATATATATTTCCGTaGGTGACACTCAGAAGGACGGCGAAGCATATTCCTCCTGATGAG | + |
|
Preference number: 1 (lower is better) Translates to: GRGRRVKDFSKYIFP*VTLRRTAKHIPPDE Trigger: CTCATCAGGAGGAATATGCTTCGCCGTCCTTCTGAGTGTCACTCACGGAAATATATATTTAGAAAAGTCTTTGACTCTTCTACCTCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | CACCGCCCTTCATGTGCTGGTTTCCCTAAGTCTGTAATGTTCTACTaGATGAAGTCAGTTGTCCAGAAGTACAGCCATCAAATACTTAAG | + |
|
Preference number: 1 (lower is better) Translates to: HRPSCAGFPKSVMFY*MKSVVQKYSHQILK Trigger: CTTAAGTATTTGATGGCTGTACTTCTGGACAACTGACTTCATTCAGTAGAACATTACAGACTTAGGGAAACCAGCACATGAAGGGCGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | AATCTTTTCCTTGTGCCTCAGCCTAAGTGTTGGGATCACAGGTTATaGGCCATTGTGCCACATCATCTCAGTATTATGTCATTACAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: NLFLVPQPKCWDHRL*AIVPHHLSIMSLQE Trigger: CTCCTGTAATGACATAATACTGAGATGATGTGGCACAATGGCTCATAACCTGTGATCCCAACACTTAGGCTGAGGCACAAGGAAAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | CGCAGCCAGACAAATCAAAGCAGTGCGGCATATCACCAGTATAATTaGCTTAGTGATGGACACAGACAGTCAAAGACACACAAAGAAACT | + |
|
Preference number: 1 (lower is better) Translates to: RSQTNQSSAAYHQYN*LSDGHRQSKTHKET Trigger: AGTTTCTTTGTGTGTCTTTGACTGTCTGTGTCCATCACTAAGTCAATTATACTGGTGATATGCCGCACTGCTTTGATTTGTCTGGCTGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TCAACAGCTAAACAACTAGAGACAGTTTCCATGACTTCTCAGAGATaGACATCCTTCCCCTGTACTGAAAAGAACAGTGTGGTGTCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: STAKQLETVSMTSQR*TSFPCTEKNSVVSV Trigger: GACAGACACCACACTGTTCTTTTCAGTACAGGGGAAGGATGTTCATCTCTGAGAAGTCATGGAAACTGTCTCTAGTTGTTTAGCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | GAATCAGAAGGCATGGTAGAAAAGGACAGAATATGCCTGGTAATTTaGTGCAGACGAACTAGACCACTAATGCTTTCCTTGTCTGTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: ESEGMVEKDRICLVI*CRRTRPLMLSLSVS Trigger: TGACACAGACAAGGAAAGCATTAGTGGTCTAGTTCGTCTGCAGCAAATTACCAGGCATATTCTGTCCTTTTCTACCATGCCTTCTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | GCAGAAACTTTCCAGCCATTGAAAACTCTAATCGATTCAGTAAGATaGAAGCCAGCATCTCCAAAGCTCTTTCCTACATGTTGCCAACAC | + |
|
Preference number: 1 (lower is better) Translates to: AETFQPLKTLIDSVR*KPASPKLFPTCCQH Trigger: GTGTTGGCAACATGTAGGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTCAATGGCTGGAAAGTTTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CCA 90 bp | GGACATGGCACTTGTAGCGCAATATCAAACAGAAACCAGACCTTGTaGGTAAAAGAGATAGCTGCATCATTAAAGTGTGTGCCTTGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: GHGTCSAISNRNQTL*VKEIAASLKCVPCY Trigger: ATAGCAAGGCACACACTTTAATGATGCAGCTATCTCTTTTACCCACAAGGTCTGGTTTCTGTTTGATATTGCGCTACAAGTGCCATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | GCCTGCACGGTTAAAATGAGGCATGGATATAAACGATGGTTTAGCTaGAAGGAAAGGCTAGACTGCTTGACATTCAGTTTGGAAAGGATA | + |
|
Preference number: 1 (lower is better) Translates to: ACTVKMRHGYKRWFS*KERLDCLTFSLERI Trigger: TATCCTTTCCAAACTGAATGTCAAGCAGTCTAGCCTTTCCTTCCAGCTAAACCATCGTTTATATCCATGCCTCATTTTAACCGTGCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | GTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCTAATTCATTaGATCTGTCTCTTGTCCTCACCTAAATATGTTGGCTGTGTACTA | + |
|
Preference number: 1 (lower is better) Translates to: VQKSLTGGKREDLIH*ICLLSSPKYVGCVL Trigger: TAGTACACAGCCAACATATTTAGGTGAGGACAAGAGACAGATCCAATGAATTAGGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | ATGAATCAGCGATGGCAAGCCACTGGAATATCACGAGAAATTGTCTaGCAAGTTACTCTCTATGAAGTCACAAAGTCACGACAAGTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: MNQRWQATGISREIV*QVTLYEVTKSRQVK Trigger: CTTCACTTGTCGTGACTTTGTGACTTCATAGAGAGTAACTTGCCAGACAATTTCTCGTGATATTCCAGTGGCTTGCCATCGCTGATTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | TATTATTGCACTGTTAGGAATGTCTTGCCATGCTGGTCACTGTTGTaGCTCATAGACATCACAGCTGGTTATGACACTGATTGCTTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: YYCTVRNVLPCWSLL*LIDITAGYDTDCFL Trigger: AAGGAAGCAATCAGTGTCATAACCAGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGTGCAATAATA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GAGGTAGAAGAGTCAAAGACTTTTCTAAATATATATTTCCGTGAGTaGCACTCAGAAGGACGGCGAAGCATATTCCTCCTGATGAGCAAG | + |
|
Preference number: 1 (lower is better) Translates to: EVEESKTFLNIYFRE*HSEGRRSIFLLMSK Trigger: CTTGCTCATCAGGAGGAATATGCTTCGCCGTCCTTCTGAGTGTCACTCACGGAAATATATATTTAGAAAAGTCTTTGACTCTTCTACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TTCCTCACTGTTCTGCCTTTGCGCATAATTTATTATCATTTCACATaGGAAGATAAAGCTCAGAGCACACATTCACGACGCCCTTACCCT | + |
|
Preference number: 1 (lower is better) Translates to: FLTVLPLRIIYYHFT*EDKAQSTHSRRPYP Trigger: AGGGTAAGGGCGTCGTGAATGTGTGCTCTGAGCTTTATCTTCTCATGTGAAATGATAATAAATTATGCGCAAAGGCAGAACAGTGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GTGTTATTTCCCACTCTGGGTCACCAGTTCTGGTCTCACACCTTCTaGTGCTTTTTCATAGTGCAGAAGAGTCAAACTTTCAAAACACAA | + |
|
Preference number: 1 (lower is better) Translates to: VLFPTLGHQFWSHTF*CFFIVQKSQTFKTQ Trigger: TTGTGTTTTGAAAGTTTGACTCTTCTGCACTATGAAAAAGCATCAGAAGGTGTGAGACCAGAACTGGTGACCCAGAGTGGGAAATAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | CAGCAGAACTTTCCCCCACTGACTCTATCTTGTCCTCTCATTCTATaGTCATTTTTACCCTGTAGAAATGTACTCATCAACTGTAAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: QQNFPPLTLSCPLIL*SFLPCRNVLINCKL Trigger: CAGCTTACAGTTGATGAGTACATTTCTACAGGGTAAAAATGAGCATAGAATGAGAGGACAAGATAGAGTCAGTGGGGGAAAGTTCTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | TTCAAGTTAGATCCAGCTCGACTCTTACAAATCCCATGTGTGAAGTaGATGTTATCTTCTGCAATAGGAACTTACCTTCAACCTCTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: FKLDPARLLQIPCVK*MLSSAIGTYLQPLG Trigger: TCCCAGAGGTTGAAGGTAAGTTCCTATTGCAGAAGATAACATGCACTTCACACATGGGATTTGTAAGAGTCGAGCTGGATCTAACTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | CCAAGATATGAATGTTATTATTGCACTGTTAGGAATGTCTTGCCATaGTGGTCACTGTTGTGGCTCATAGACATCACAGCTGGTTATGAC | + |
|
Preference number: 1 (lower is better) Translates to: PRYECYYCTVRNVLP*WSLLWLIDITAGYD Trigger: GTCATAACCAGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGTGCAATAATAACATTCATATCTTGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TTGCACGGCCTGAACTTGACAAAGCACACAGTGATTTGCATCATTTaGAACATCCTATTTCGGAGCTCTTCTTCCTTCTTTAAAGGTGAT | + |
|
Preference number: 1 (lower is better) Translates to: LHGLNLTKHTVICII*NILFRSSSSFFKGD Trigger: ATCACCTTTAAAGAAGGAAGAAGAGCTCCGAAATAGGATGTTTCAAATGATGCAAATCACTGTGTGCTTTGTCAAGTTCAGGCCGTGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ATATTTCTTCAGATTCAGTTCCATGGGATCGTGAGTGCTGCAGTCTaGATGTATACTGAAAACCCATTTGCTGTAAACCAAACCTCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: IFLQIQFHGIVSAAV*MYTENPFAVNQTSP Trigger: TGGAGAGGTTTGGTTTACAGCAAATGGGTTTTCAGTATACATTCAGACTGCAGCACTCACGATCCCATGGAACTGAATCTGAAGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | TCTTGTCAAAGAACACAGCTCATTCAAGGAACAAATAACATAGTCTaGAAACAGGAATTTCAGCAAGTGGTTCCTTACAGCCCAGACGTA | + |
|
Preference number: 1 (lower is better) Translates to: SCQRTQLIQGTNNIV*KQEFQQVVPYSPDV Trigger: TACGTCTGGGCTGTAAGGAACCACTTGCTGAAATTCCTGTTTGCAGACTATGTTATTTGTTCCTTGAATGAGCTGTGTTCTTTGACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | ACTATATACTCTGTCATAACATCTCTCGATGTCCTTCCCAGCTCCTaGCCACAATCAAATTTCACTTCACTATTCAGTTCCTTGGGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: TIYSVITSLDVLPSS*PQSNFTSLFSSLGN Trigger: ATTTCCCAAGGAACTGAATAGTGAAGTGAAATTTGATTGTGGGCAGGAGCTGGGAAGGACATCGAGAGATGTTATGACAGAGTATATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | CACCACACAGCTGTGGACACAGACAGAGGAAACACTAGAACTGTTTaGCATACCCTGATATATAAATGCCAATTACTAAGATTTCTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: HHTAVDTDRGNTRTV*HTLIYKCQLLRFLQ Trigger: TTGCAGAAATCTTAGTAATTGGCATTTATATATCAGGGTATGCCAAACAGTTCTAGTGTTTCCTCTGTCTGTGTCCACAGCTGTGTGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | GTTAATAGGAAACGAGGGTTGTGGACCTCTTTAGAAATAGTTCTTTaGGTCAATTCCAATCTTTGTTGTCAGCAGTCCAGTCCTTTAGCA | + |
|
Preference number: 1 (lower is better) Translates to: VNRKRGLWTSLEIVL*VNSNLCCQQSSPLA Trigger: TGCTAAAGGACTGGACTGCTGACAACAAAGATTGGAATTGACCCAAAGAACTATTTCTAAAGAGGTCCACAACCCTCGTTTCCTATTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | AGATATGAATGTTATTATTGCACTGTTAGGAATGTCTTGCCATGCTaGTCACTGTTGTGGCTCATAGACATCACAGCTGGTTATGACACT | + |
|
Preference number: 1 (lower is better) Translates to: RYECYYCTVRNVLPC*SLLWLIDITAGYDT Trigger: AGTGTCATAACCAGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGTGCAATAATAACATTCATATCT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | CTCCAAAGCTCTTTCCTACATGTTGCCAACACGGTTGTCTCTCTATaGAGAGTTTCTGAGGTTTCTAAGACTTATTCTGCTCTAATAAAG | + |
|
Preference number: 1 (lower is better) Translates to: LQSSFLHVANTVVSL*RVSEVSKTYSALIK Trigger: CTTTATTAGAGCAGAATAAGTCTTAGAAACCTCAGAAACTCTTCATAGAGAGACAACCGTGTTGGCAACATGTAGGAAAGAGCTTTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR TCA 90 bp | TCTATTGGACAGTTTACGGTTCCCAATGATGTCATCGTATCTAGGTaGTTAAGGACCTATTTGGTTTTCCAATCACACAAATCAGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: SIGQFTVPNDVIVSR*LRTYLVFQSHKSAA Trigger: AGCTGCTGATTTGTGTGATTGGAAAACCAAATAGGTCCTTAATCACCTAGATACGATGACATCATTGGGAACCGTAAACTGTCCAATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ACCCTCAATGTACATATTTTGACCTCGAAGCCTTCCCAACCCACTTaGGATTTACTATTTAGGAAATCTATCTCCACTGCCTTTTATAGC | + |
|
Preference number: 1 (lower is better) Translates to: TLNVHILTSKPSQPT*DLLFRKSISTAFYS Trigger: GCTATAAAAGGCAGTGGAGATAGATTTCCTAAATAGTAAATCTCAAGTGGGTTGGGAAGGCTTCGAGGTCAAAATATGTACATTGAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ATAATCACACTGAGAGGTCTTGTAAATTCACAGAAATTAGCAAACTaGCAGTCCTTCATCCCAGAGATACCACTGGAAATTCTGGTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: IITLRGLVNSQKLAN*QSFIPEIPLEILVS Trigger: ACTCACCAGAATTTCCAGTGGTATCTCTGGGATGAAGGACTGTCAGTTTGCTAATTTCTGTGAATTTACAAGACCTCTCAGTGTGATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TGCATACAATTTCCCTTTATTATCATTCTAATCACCCACAAAAGGTaGGGATACCAGTCACATTCACTGAAGGCCCTTGAACCTAGTATC | + |
|
Preference number: 1 (lower is better) Translates to: CIQFPFIIILITHKR*GYQSHSLKALEPSI Trigger: GATACTAGGTTCAAGGGCCTTCAGTGAATGTGACTGGTATCCTCACCTTTTGTGGGTGATTAGAATGATAATAAAGGGAAATTGTATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ACCAGTAGACACACTCACTCTCTATCTACATGTGCAAGCATACAGTaGTCTATCTACTATATACTCTGTCATAACATCTCTCGATGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: TSRHTHSLSTCASIQ*SIYYILCHNISRCP Trigger: AGGACATCGAGAGATGTTATGACAGAGTATATAGTAGATAGATCACTGTATGCTTGCACATGTAGATAGAGAGTGAGTGTGTCTACTGGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | ACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTCTGTTCCTaGCTGTGTCTCTCTACCTCTCTGTATCTCTCTCTTTTTCTTACC | + |
|
Preference number: 1 (lower is better) Translates to: TYSFIEYTHLERLCS*LCLSTSLYLSLFLT Trigger: GGTAAGAAAAAGAGAGAGATACAGAGAGGTAGAGAGACACAGGCAGGAACAGAGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | ATGAAGAATATAGAATATTTAACTCAGGGAAAATCCACAAGCTTTTaGTCACTAACTGCCATCCAGTCCCTAGTTTGGCACACAGTAGGT | + |
|
Preference number: 1 (lower is better) Translates to: MKNIEYLTQGKSTSF*SLTAIQSLVWHTVG Trigger: ACCTACTGTGTGCCAAACTAGGGACTGGATGGCAGTTAGTGATCAAAAGCTTGTGGATTTTCCCTGAGTTAAATATTCTATATTCTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | TTACCAGATGCCCACAATTTGTCAGCCAATAAGAGTAAGAGGAAATaGTACAGATTTCCTGGGTTTGAACCTTTGTATTCAACTCCTTAC | + |
|
Preference number: 1 (lower is better) Translates to: LPDAHNLSANKSKRK*YRFPGFEPLYSTPY Trigger: GTAAGGAGTTGAATACAAAGGTTCAAACCCAGGAAATCTGTATCATTTCCTCTTACTCTTATTGGCTGACAAATTGTGGGCATCTGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | GTGGAAGCAATGTATGAAAAACGTCAATGCTCATCACATGATCTCTaGCATGAGGTTCCAAACTGTTTTCCCATTTCTAAAGCTATAATC | + |
|
Preference number: 1 (lower is better) Translates to: VEAMYEKRQCSSHDL*HEVPNCFPISKAII Trigger: GATTATAGCTTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCAGAGATCATGTGATGAGCATTGACGTTTTTCATACATTGCTTCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | TGCCTTATTTCAATTATTTCACTAATGTGCACACACAGTTATGGCTaGTTCCTGGGGAGTGTGCAATTTAGACATTTAAAAACACACCCT | + |
|
Preference number: 1 (lower is better) Translates to: CLISIISLMCTHSYG*FLGSVQFRHLKTHP Trigger: AGGGTGTGTTTTTAAATGTCTAAATTGCACACTCCCCAGGAAGCAGCCATAACTGTGTGTGCACATTAGTGAAATAATTGAAATAAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | CCAGCTCCTGCCCACAATCAAATTTCACTTCACTATTCAGTTCCTTaGGAAATTAAATCTAAGTCATGCCTATTACACATACTCACAGTA | + |
|
Preference number: 1 (lower is better) Translates to: PAPAHNQISLHYSVP*EIKSKSCLLHILTV Trigger: TACTGTGAGTATGTGTAATAGGCATGACTTAGATTTAATTTCCCAAGGAACTGAATAGTGAAGTGAAATTTGATTGTGGGCAGGAGCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | GAAATAGCAAATGGATCAAAAATATTCCATGTGGGTAGTAGACATTaGCTGCGCGTCACGATATGCAATTTATTTTTAGGACAGAAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: EIANGSKIFHVGSRH*LRVTICNLFLGQKV Trigger: AACTTTCTGTCCTAAAAATAAATTGCATATCGTGACGCGCAGGCAATGTCTACTACCCACATGGAATATTTTTGATCCATTTGCTATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 90 bp | GCATTCATTTGGTGGCACCCATTTACTGTGATAGTAATCATCATCTaGTACTATAATTTAGCTCTACACATTCTTTTGCCACAGAAATAC | + |
|
Preference number: 1 (lower is better) Translates to: AFIWWHPFTVIVIII*YYNLALHILLPQKY Trigger: GTATTTCTGTGGCAAAAGAATGTGTAGAGCTAAATTATAGTATCAGATGATGATTACTATCACAGTAAATGGGTGCCACCAAATGAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 90 bp | GACAGAGGAAACACTAGAACTGTTTGGCATACCCTGATATATAAATaGCAATTACTAAGATTTCTGCAAATCTCCCCTAGATTTTTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: DRGNTRTVWHTLIYK*QLLRFLQISPRFFY Trigger: ATAGAAAAATCTAGGGGAGATTTGCAGAAATCTTAGTAATTGGCATTTATATATCAGGGTATGCCAAACAGTTCTAGTGTTTCCTCTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | AGAGAACTCAAATTGGAAAATAGCTGTCCTTACGAGTTTGCAGCATaGTCTGCATTAAGATCATCTACTAAATTTAACTTTGTTCTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: RELKLENSCPYEFAA*SALRSSTKFNFVLL Trigger: AAGGAGAACAAAGTTAAATTTAGTAGATGATCTTAATGCAGACCATGCTGCAAACTCGTAAGGACAGCTATTTTCCAATTTGAGTTCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 90 bp | CTGAGAGTTAAGCATTCTTCATTTGTACTGTTTCAGATAAGGCTTTaGTCTTTTGATACATTTGCCTTTACTACTGGTATCACAAAGTAC | + |
|
Preference number: 1 (lower is better) Translates to: LRVKHSSFVLFQIRL*SFDTFAFTTGITKY Trigger: GTACTTTGTGATACCAGTAGTAAAGGCAAATGTATCAAAAGACCAAAGCCTTATCTGAAACAGTACAAATGAAGAATGCTTAACTCTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAACGCATCAGCAGTaGGACCACTCGGGCATTCCG | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCPTHQQ*DHSGIP Trigger: CGGAATGCCCGAGTGGTCTCACTGCTGATGCGTTGG...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCCCCTCCCACCTTaGTATCATTCCCTCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCSPLPP*YHSLLG Trigger: GCCCAGGAGGGAATGATACCAAGGTGGGAGGGGGCT...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGAGACCCACAGGTTaGGAACCCCTGCCTTATACT | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCPRPTG*EPLPYT Trigger: AGTATAAGGCAGGGGTTCTCAACCTGTGGGTCTCGG...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGCCTATGCCAAGGGCTGCCTTCTCTGGATTGGTCCTCCATCACGGGGTGTTCTCCCTCCGCTCTTaGTTAACAGTGGGAAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SQPMPRAAFSGLVLHHGVFSLRS*LTVGRI Trigger: AATCCTTCCCACTGTTAAGCAAGAGCGGAGGGAGAA...CACCCCGTGATGGAGGACCAATCCAGAGAAGGCAGCCCTTGGCATAGGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTGGAAACAGGTAGTAGATCCCTGGGGCTCACTAACCAGCCACCCCTGCCTACTGTAGGAGTATGTTaGGCTCCTACGCTAATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: EVETGSRSLGLTNQPPLPTVGVC*APTLIP Trigger: CGGGATTAGCGTAGGAGCCCAACATACTCCTACAGT...AGGCAGGGGTGGCTGGTTAGTGAGCCCCAGGGATCTACTACCTGTTTCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAGCAGACATCAACTaGCAAGACCTCCTCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCPADIN*QDLLSW Trigger: CCAGCTGAGGAGGTCTTGCCAGTTGATGTCTGCTGG...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GCAGTGTGGAAGCATACAACCTTCCTCCCATCCCCACCTGTCTCCTaGGGAGCATGGATACCATTTATGAACTGCGACAGCCTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: AVWKHTTFLPSPPVS*GAWIPFMNCDSLSS Trigger: GGAGGAGAGGCTGTCGCAGTTCATAAATGGTATCCATGCTCCCAAGGAGACAGGTGGGGATGGGAGGAAGGTTGTATGCTTCCACACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACCTCGCTGCAGAGAACTaGGCCTGGAAAGACCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHLAAEN*AWKDPT Trigger: GGTTGGGTCTTTCCAGGCTCAGTTCTCTGCAGCGAG...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTGGAAACAGGTAGTAGATCCCTGGGGCTCACTAACCAGCCACCCCTGCCTTCTTTGCTCCTCATCTaGGATTTTGAGGTCCCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: EVETGSRSLGLTNQPPLPSLLLI*DFEVPS Trigger: ACTCGGGACCTCAAAATCTCAGATGAGGAGCAAAGA...AGGCAGGGGTGGCTGGTTAGTGAGCCCCAGGGATCTACTACCTGTTTCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTGGAAACAGGTAGTAGATCCCTGGGGCTCACTAACCAGCCACCCCTGCCTGGTCATCAGAGAGCCTaGAGTTCATCCTCACAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: EVETGSRSLGLTNQPPLPGHQRA*SSSSQN Trigger: GTTTTGTGAGGATGAACTGCAGGCTCTCTGATGACC...AGGCAGGGGTGGCTGGTTAGTGAGCCCCAGGGATCTACTACCTGTTTCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTACCATGGGAGTCCTaGGAATCAAACTCGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCLPWES*ESNSGG Trigger: ACCACCCGAGTTTGATTCCCAGGACTCCCATGGTAG...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGAAGGACTCTCTTaGGGCTGGAGAGATGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCREGLS*GWRDGS Trigger: TGAGCCATCTCTCCAGCCCCAAGAGAGTCCTTCTCT...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | ATGGGGGACCCTAAGGCAGCTACATTACCAACAGCCCACCCAGCCTaGGTGAGACAGGAAAGAGAGATTAATCCCAGGGCTCCCTGTATA | + |
|
Preference number: 2 (lower is better) Translates to: MGDPKAATLPTAHPA*VRQEREINPRAPCI Trigger: TATACAGGGAGCCCTGGGATTAATCTCTCTTTCCTGTCTCACCAAGGCTGGGTGGGCTGTTGGTAATGTAGCTGCCTTAGGGTCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTCCTGACAACCCAGTGCTaGGAATCCTCCCTGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RTEPGKTQPWAERYHFILLTTQC*ESSLSS Trigger: TGAAGACAGGGAGGATTCTCAGCACTGGGTTGTCAG...GAGTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTAATCCAGGGTGGGAGTaGTTTTCTCCTCCAAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCNPGWE*FSPPKH Trigger: GTGCTTTGGAGGAGAAAACCACTCCCACCCTGGATT...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | CTTGTACAATGCAAGCAAATCCTAGTTATCTTCTGCGTCGCTGCCTaGACGGTCCTGGGAAACGTGAAACTGCACCTGGGACTCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LVQCKQILVIFCVAA*TVLGNVKLHLGLSQ Trigger: CTGGCTGAGTCCCAGGTGCAGTTTCACGTTTCCCAGGACCGTCAAGGCAGCGACGCAGAAGATAACTAGGATTTGCTTGCATTGTACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | AAGACAAATGAAAAACCTCCAAAACCAAGTGAAGGGCAGAAACGGTaGTGTGCTGAGCAGACCCTCTGGGAGTCAGTGCCCACTGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KTNEKPPKPSEGQKR*CAEQTLWESVPTAQ Trigger: CTGGGCAGTGGGCACTGACTCCCAGAGGGTCTGCTCAGCACACAACCGTTTCTGCCCTTCACTTGGTTTTGGAGGTTTTTCATTTGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGTTCTCCTTCCTTGGTaGGAACTCAGTCTGCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLVLLPW*ELSLPE Trigger: TTCAGGCAGACTGAGTTCTCACCAAGGAAGGAGAAC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCCTATGCCAAGGGCTGCCTTCTCTGGATTGGTCCTCCATCACGGGGTGAAATATATATTTCCGTaGGTGACACTCAGAAGGACG | + |
|
Preference number: 2 (lower is better) Translates to: SQPMPRAAFSGLVLHHGVKYIFP*VTLRRT Trigger: CGTCCTTCTGAGTGTCACTCACGGAAATATATATTT...CACCCCGTGATGGAGGACCAATCCAGAGAAGGCAGCCCTTGGCATAGGCTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTGGAAACAGGTAGTAGATCCCTGGGGCTCACTAACCAGCCACCCCTGCCTGCTAAGCCATCTGTCTaGCTCCAAAATCCTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: EVETGSRSLGLTNQPPLPAKPSV*LQNPVF Trigger: AAAAACAGGATTTTGGAGTCAGACAGATGGCTTAGC...AGGCAGGGGTGGCTGGTTAGTGAGCCCCAGGGATCTACTACCTGTTTCCACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCACCTCCAAAACCAAGTaGAGGGCAGAAACGGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLTSKTK*RAETVV Trigger: CACAACCGTTTCTGCCCTTCACTTGGTTTTGGAGGT...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTGGAAACAGGTAGTAGATCCCTGGGGCTCACTAACCAGCCACCCCTGCCTAGCAACATTCCAACCTaGCTTTGGACATCTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: EVETGSRSLGLTNQPPLPSNIPT*LWTSKT Trigger: GGTTTTAGATGTCCAAAGGCAGGTTGGAATGTTGCT...AGGCAGGGGTGGCTGGTTAGTGAGCCCCAGGGATCTACTACCTGTTTCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGAGTTTGGTTGGTaGTGGTTGTTCTTTTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCREFGW*WLFFWW Trigger: CCACCAAAAGAACAACCACCACCAACCAAACTCCCT...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGCCTAAAAGCAATTGGCTTCTGGAGGAAAGGAATGAGGAACTGTGGGAGGAAAGAGTGGAATAGATaGGCCCCCTCCCACCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGLKAIGFWRKGMRNCGRKEWNR*APSHLG Trigger: ACCAAGGTGGGAGGGGGCTCATCTATTCCACTCTTT...CCTCCCACAGTTCCTCATTCCTTTCCTCCAGAAGCCAATTGCTTTTAGGCCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATGGATGCTGAGATaGCAATCCTGTACCATCACA | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCSWMLR*QSCTIT Trigger: TGTGATGGTACAGGATTGTCATCTCAGCATCCATGA...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACTTTAAAAGCACTGACTaGTCCTCCAGAGGCCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHFKSTD*SSRGPE Trigger: CTCAGGGCCTCTGGAGGAGCAGTCAGTGCTTTTAAA...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCCGTAACTGTAATGAGTaGCAACGCATCAGCAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLRNCNE*QRISSE Trigger: CTCACTGCTGATGCGTTGGCACTCATTACAGTTACG...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAATCACTTGCTCTGCTCTaGCTGGGCCATTCCTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLESLALL*LGHSYS Trigger: GGAGTAGGAATGGCCCAGGCAGAGCAGAGCAAGTGA...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGCCTAAAAGCAATTGGCTTCTGGAGGAAAGGAATGAGGAACTGTGGGAGGCCCTTCTTGAAGCCCTaGGCAGAGGTAGAAGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLKAIGFWRKGMRNCGRPFLKP*AEVEES Trigger: TGACTCTTCTACCTCTGCCCAGGGCTTCAAGAAGGG...CCTCCCACAGTTCCTCATTCCTTTCCTCCAGAAGCCAATTGCTTTTAGGCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCCAGAAGGAAGCTCCCTaGACCCCACAGCACCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTQKEAP*TPQHLM Trigger: CATTAGGTGCTGTGGGGTCCAGGGAGCTTCCTTCTG...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTAGGAAAGGTGGGACTTaGGTTTCAGTGGGAAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSRKGGT*VSVGRG Trigger: TCCCCTTCCCACTGAAACCCAAGTCCCACCTTTCCT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGGAAAAATCACGATTGTTCCAGGAATGGCCCATCCGCCAATTAAAAAGTCTCGCTGCAGAGAACTaGGCCTGGAAAGACCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: QREKSRLFQEWPIRQLKSLAAEN*AWKDPT Trigger: GGTTGGGTCTTTCCAGGCTCAGTTCTCTGCAGCGAG...ACTTTTTAATTGGCGGATGGGCCATTCCTGGAACAATCGTGATTTTTCCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCATACCATTTATGAACTaGGACAGCCTCTCCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLIPFMN*DSLSSL Trigger: CAAGGAGGAGAGGCTGTCGCAGTTCATAAATGGTAT...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAGAAAACATCTTCTaGCTCATGATGGCCAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCRENIF*LMMAKD Trigger: ATCTTTGGCCATCATGAGGCAGAAGATGTTTTCTCG...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGTTAAAGCACAGATaGATCACAAGATCACTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCQLKHR*ITRSLS Trigger: GGACAGTGATCTTGTGATGCATCTGTGCTTTAACTG...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGAAAGGAAATGCATCTaGTTGGGGAGATTGCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLERKCI*LGRLLL Trigger: GAGTAGCAATCTCCCCAAGCAGATGCATTTCCTTTC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGCCTATGCCAAGGGCTGCCTTCTCTGGATTGGTCCTCCATCACGGGGTGATTCCAACCTGCCTTTaGACATCTAAAACCTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQPMPRAAFSGLVLHHGVIPTCL*TSKTFK Trigger: TTTAAAGGTTTTAGATGTCCAAAGGCAGGTTGGAAT...CACCCCGTGATGGAGGACCAATCCAGAGAAGGCAGCCCTTGGCATAGGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGTGCACCACCACATCTaGCTAATTTTATGTGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLVHHHI*LILCAW Trigger: CCATGCACATAAAATTAGCCAGATGTGGTGGTGCAC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCCTAATCAGCAGGAAGTaGTGTAACAATACCCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLLISRK*CNNTLA Trigger: GGCAAGGGTATTGTTACACCACTTCCTGCTGATTAG...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAGGTACAGAGAAGGCATaGCAGGAATGGCATCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLEGTEKA*QEWHLD Trigger: GTCCAGATGCCATTCCTGCCATGCCTTCTCTGTACC...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GATGGGGGAGGGAGAGAGTTACTTTTGAAGAACAACTTCGAGGAGTaGCTTCCCTCCTCCCACCATATTAAGTCTGTCAGGTCATCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DGGGRELLLKNNFEE*LPSSHHIKSVRSSG Trigger: TCCTGATGACCTGACAGACTTAATATGGTGGGAGGAGGGAAGCAACTCCTCGAAGTTGTTCTTCAAAAGTAACTCTCTCCCTCCCCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GCACGCCAGAGCACACTTCCACATTCTCACACACAACCAAATGCATaGGTATGGCTAAATCTCCTCCTGTCTCGTTCCGTTCACAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: ARQSTLPHSHTQPNA*VWLNLLLSRSVHNL Trigger: GAGATTGTGAACGGAACGAGACAGGAGGAGATTTAGCCATACCAATGCATTTGGTTGTGTGTGAGAATGTGGAAGTGTGCTCTGGCGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGTCTTGTGCTACCAGTaGTGGACAATGTCAAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLVLCYQ*WTMSKH Trigger: ATGTTTTGACATTGTCCATCACTGGTAGCACAAGAC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAGCACTTAGCACAAAGTaGCTGGTAAGCACCCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLEALSTK*LVSTHN Trigger: GTTGTGGGTGCTTACCAGTCACTTTGTGCTAAGTGC...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAACTCCCACGGTGCTCTaGACAAGGGAAACACACAAT | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLETPTVL*TRETHN Trigger: ATTGTGTGTTTCCCTTGTTCAGAGCACCGTGGGAGT...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAACAGGGTAGACCCCTGTaGACCTCCTTTCATTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLEQGRPL*TSFHSF Trigger: AAAGGAATGAAAGGAGGTTCACAGGGGTCTACCCTG...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTTCTTTGCAATTGCGTaGTCTAGAATGATATCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RELSLERPNPGLSGITSYFFAIA*SRMISP Trigger: GGGGGATATCATTCTAGAGCACGCAATTGCAAAGAA...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCACCAGACAGGCATTTTaGCTCTTGGATTCGCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTTRQAF*LLDSPP Trigger: TGGTGGCGAATCCAAGAGGCAAAATGCCTGTCTGGT...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAATTGCTCTGCTCTGCCTaGGCCATTCCTACTCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLELLCSA*AIPTPI Trigger: TATTGGAGTAGGAATGGCCCAGGCAGAGCAGAGCAA...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GTAAGAAACACAAAACACACAAAACCAGAATTCGCGCATTGGCACTaGCGCGAGGCCACTTACCTGCTTGTAGACAAAGGATGCCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: VRNTKHTKPEFAHWH*REATYLLVDKGCQM Trigger: CATCTGGCATCCTTTGTCTACAAGCAGGTAAGTGGCCTCGCGCAAGTGCCAATGCGCGAATTCTGGTTTTGTGTGTTTTGTGTTTCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | ATTTTCAGTGGAAACCCTCGAAAGGACTTCACTAAGTGGCCTGTCTaGCCATCCTCCTGGATCTTGTACTTTAGGAGCACGAAGCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: IFSGNPRKDFTKWPV*PSSWILYFRSTKHK Trigger: CTTGTGCTTCGTGCTCCTAAAGTACAAGATCCAGGAGGATGGCAAGACAGGCCACTTAGTGAAGTCCTTTCGAGGGTTTCCACTGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | AGCATCCTCTCGCGTGTCTGCTTCGGCAGAACATTCTTTCACCTGTaGACCCCAGGCAAAACATATGACACTACTGAGCTTCCAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SILSRVCFGRTFFHL*TPGKTYDTTELPKK Trigger: TTTCTTTGGAAGCTCAGTAGTGTCATATGTTTTGCCTGGGGTCAACAGGTGAAAGAATGTTCTGCCGAAGCAGACACGCGAGAGGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACGGAGAGAGTTACTTTTaGAGAACAACTTCGAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHGESYF*RTTSRS Trigger: ACTCCTCGAAGTTGTTCTTCAAAAGTAACTCTCTCC...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAATGTTCTTTTATaGCCACTGGGAGACTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCRNVLL*PLGDYK Trigger: TTTGTAGTCTCCCAGTGGTCATAAAAGAACATTTCT...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTGGTATATATGTaGGCTTTAACTAAAACCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCALVYM*ALTKTC Trigger: ACAGGTTTTAGTTAAAGCTCACATATATACCAGAGC...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTACAATCTTTTCCTTGTaGCTCAGCCTAAGTGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSTIFSL*LSLSVG Trigger: CCCAACACTTAGGCTGAGGCACAAGGAAAAGATTGT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTGCTTGCCATTCATTCTaGACAGAGGGAAAAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSACHSF*TEGKIT Trigger: CGTGATTTTTCCCTCTGTCCAGAATGAATGGCAAGC...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGTTAAGTTACCATTCTaGGTTCTTTCCATCCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLVKLPF*VLSIPL Trigger: AAGTGGGATGGAAAGAACCCAGAATGGTAACTTAAC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCCTAATTTTATGTGCATaGGTGTTTTCCCTGCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLLILCA*VFSLHA Trigger: TGCATGCAGGGAAAACACCCATGCACATAAAATTAG...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACTTGCTGGGGAAGGTGTaGTTTTCTTCTGTGTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHLLGKV*FSSVCK Trigger: TTTACACACAGAAGAAAACCACACCTTCCCCAGCAA...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | CCAGTGCAATCTAAGCACATAACTAGATTCCCATCTGGAGCTGTCTaGGAAATCATCATGCTCTCAGATTCCTGCTGTCCTTGCATGACC | + |
|
Preference number: 2 (lower is better) Translates to: PVQSKHITRFPSGAV*EIIMLSDSCCPCMT Trigger: GGTCATGCAAGGACAGCAGGAATCTGAGAGCATGATGATTTCCAAGACAGCTCCAGATGGGAATCTAGTTATGTGCTTAGATTGCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | TATCCTAGAAAGAAACACCATGCCCGCCCACCAATGCCTTCATTTTaGATTTCCTGGTTTCCAGAAGGGCAGGCGAGGGAATACAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: YPRKKHHARPPMPSF*ISWFPEGQAREYNS Trigger: AGAATTGTATTCCCTCGCCTGCCCTTCTGGAAACCAGGAAATCAAAAATGAAGGCATTGGTGGGCGGGCATGGTGTTTCTTTCTAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTACTCTCCTCCTTGCTCTaGTTGAGAACAAACCACTTA | + |
|
Preference number: 2 (lower is better) Translates to: EEEEKKLGILTAKSRPALLSSLL*LRTNHL Trigger: TAAGTGGTTTGTTCTCAATCAGAGCAAGGAGGAGAG...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACCTGCAGTATTTCAAATaGTTTCTACAGTCACCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHLQYFK*FLQSPD Trigger: GTCAGGTGACTGTAGAAATCATTTGAAATACTGCAG...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTACTCTTTCCTACATGTTaGCAACACGGTTGTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EEEEKKLGILTAKSRPALLFPTC*QHGCLS Trigger: AGAGAGACAACCGTGTTGGCAACATGTAGGAAAGAG...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | TGCCATGAGGTTCCAAACTGTTTTCCCATTTCTAAAGCTATAATCATAAAGGGTGCCAGAGCCAGCCTATaGCAAGGGCTGCCTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CHEVPNCFPISKAIIIKGARASL*QGLPSL Trigger: CAGAGAAGGCAGCCCTTGGCATAGGCTGGCTCTGGC...ACCCTTTATGATTATAGCTTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTTTAAAGTGTGTGCCTTaGTATCACAAGGACCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSLKCVP*YHKDLS Trigger: ACTCAGGTCCTTGTGATAGCAAGGCACACACTTTAA...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACGCTCATGGTTCTTATTaGAAAAGTAGGTACCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHAHGSY*KSRYQP Trigger: AGGTTGGTACCTACTTTTGCAATAAGAACCATGAGC...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTATGGGTTTGATGAGGTaGTTGCTTGAAATACCGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSMGLMR*LLEIPC Trigger: ACACGGTATTTCAAGCAAGCACCTCATCAAACCCAT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTATCGATTCAGTAAGATaGAAGCCAGCATCTCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSIDSVR*KPASPK Trigger: CTTTGGAGATGCTGGCTTCCATCTTACTGAATCGAT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCTGTATTAATCCAGGGTaGGAGTGGTTTTCTCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTCINPG*EWFSPP Trigger: TGGAGGAGAAAACCACTCCCACCCTGGATTAATACA...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTATCCAGTCCCTAGTTTaGCACACAGTAGGTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSIQSLV*HTVGFQ Trigger: TTGAAAACCTACTGTGTGCCAAACTAGGGACTGGAT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTCCTGCATTTGAGGAGTaGTTGAACAGACAAGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSPAFEE*LNRQDL Trigger: CAAATCTTGTCTGTTCAACCACTCCTCAAATGCAGG...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | CTGACAGTCCTTCATCCCAGAGATACCACTGGAAATTCTGGTGAGTaGAAACTTCAAAGGGCTCCGTCAGGGAGACAGAAACTTTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LTVLHPRDTTGNSGE*KLQRAPSGRQKLLT Trigger: TGTTAAAAGTTTCTGTCTCCCTGACGGAGCCCTTTGAAGTTTCAACTCACCAGAATTTCCAGTGGTATCTCTGGGATGAAGGACTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | TCCTTGTGCCTCAGCCTAAGTGTTGGGATCACAGGTTATGAGCCATaGTGCCACATCATCTCAGTATTATGTCATTACAGGAGAGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLCLSLSVGITGYEP*CHIISVLCHYRRER Trigger: TCTCTCTCTCCTGTAATGACATAATACTGAGATGATGTGGCACAATGGCTCATAACCTGTGATCCCAACACTTAGGCTGAGGCACAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CAA 90 bp | AGCATTAAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTaGTACACCCCCTCTCTGATTTCACCAATTACAGGATTTCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SIKGQSSRRKKLYGM*YTPSLISPITGFPS Trigger: TGAGGGAAATCCTGTAATTGGTGAAATCAGAGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTTAATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACTTGTCTTCCAAGAAATaGATTGGATCTCTGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHLSSKK*IGSLKT Trigger: TGTCTTCAGAGATCCAATTCATTTCTTGGAAGACAA...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAATCAGCTATGTTACAATaGCAGGCAGGTTTGGTTATC | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLESAMLQ*QAGLVI Trigger: GATAACCAAACCTGCCTGTCATTGTAACATAGCTGA...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTTTAGCTTTTTGTAAATaGTCCTTTTTAGCCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSLAFCK*SFLALG Trigger: GCCCAGGGCTAAAAAGGATCATTTACAAAAAGCTAA...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTTTCTTTGCAATTGCGTaGTCTAGAATGATATCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: APLLELQSLTRSKDASSTFFAIA*SRMISP Trigger: GGGGGATATCATTCTAGAGCACGCAATTGCAAAGAA...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAACGGCTGGCCTAGAATaGCTATGTTTTGTATCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLETAGLE*LCFVSK Trigger: CTTAGATACAAAACATAGGCATTCTAGGCCAGCCGT...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTTTAAAAATAAAAAGTaGTCCAGTTCAGCCGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RELSLERPNPGLSGITSYFKNKK*SSSAVF Trigger: GAACACGGCTGAACTGGACCACTTTTTATTTTTAAA...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTAACCAGAAAAGGACACTaGATCCCTTGGAACTTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EEEEKKLGILTAKSRPALTRKGH*IPWNLD Trigger: ATCTAAGTTCCAAGGGATCCAGTGTCCTTTTCTGGT...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTATTATGTAGCCAGGAATaGGGTCATCACGAATTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: EEEEKKLGILTAKSRPALLCSQE*GHHEFL Trigger: CAGAAATTCGTGATGACCCCATTCCTGGCTACATAA...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR TCA 90 bp | GCCCTAAAGGAGTTCACTGACTGCATAGGTACCCTCTTCCATCCCAGCTATTGTGGAAATGTTTCCAACTaGCGAAAACTTCATATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALKEFTDCIGTLFHPSYCGNVSN*RKLHIG Trigger: TCCAATATGAAGTTTTCGTCAGTTGGAAACATTTCC...ACAATAGCTGGGATGGAAGAGGGTACCTATGCAGTCAGTGAACTCCTTTAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCCTAAAAGCAATTGGCTTCTGGAGGAAAGGAATGAGGAACTGTGGGAGGCTGTTTGGCATACCCTaGTATATAAATGCCAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: LGLKAIGFWRKGMRNCGRLFGIP*YINANY Trigger: GTAATTGGCATTTATATATCAGGGTATGCCAAACAG...CCTCCCACAGTTCCTCATTCCTTTCCTCCAGAAGCCAATTGCTTTTAGGCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR TCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAATCAGCTAAGATGAAATaGCTTCACAATGTCAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLESAKMK*LHNVKT Trigger: GGTCTTGACATTGTGAAGTCATTTCATCTTAGCTGA...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAGTGATTTGCATCATTTaGAACATCCTATTTCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLEVICII*NILFRS Trigger: GCTCCGAAATAGGATGTTTCAAATGATGCAAATCAC...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR GCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAATGCTCTAATAAAGCTTaGCATTCATTCTGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLECSNKA*HSFWTE Trigger: CTCTGTCCAGAATGAATGGCAAGCTTTATTAGAGCA...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTGCTATGTTCCTTATTTaGATATGTTTGCACCCATTG | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSAMFLI*ICLHPL Trigger: CAATGGGTGCAAACATATGCAAATAAGGAACATAGC...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTACATAATTTTCTTTCCTaGAGTTCTAGGGATGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: EEEEKKLGILTAKSRPALHNFLS*SSRDVQ Trigger: CTGCACATCCCTAGAACTCCAGGAAAGAAAATTATG...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCGGACTTGGGTTTCAGTaGGAAGGGGAGGGAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FHSFPMLSSHVTITDTISGLGFQ*EGEGEK Trigger: CTTTTCTCCCTCCCCTTCCCACTGAAACCCAAGTCC...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CAA 90 bp | GAAGCCAGCATCTCCAAAGCTCTTTCCTACATGTTGCCAACACGGTaGTCTCTCTATGAAGAGTTTCTGAGGTTTCTAAGACTTATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: EASISKALSYMLPTR*SLYEEFLRFLRLIL Trigger: CAGAATAAGTCTTAGAAACCTCAGAAACTCTTCATAGAGAGACAACCGTGTTGGCAACATGTAGGAAAGAGCTTTGGAGATGCTGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
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| 3UTR CAA 90 bp | ACAGATGCATCACAAGATCACTGTCCCTCTCAGTTTAATGGGTCTTaGTTTTCGGAGAACAACAGGAATTATAGGAGCAGAGGTCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TDASQDHCPSQFNGS*FSENNRNYRSRGLA Trigger: TGCAAGACCTCTGCTCCTATAATTCCTGTTGTTCTCCGAAAACAAAGACCCATTAAACTGAGAGGGACAGTGATCTTGTGATGCATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
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| 3UTR CAA 90 bp | GAAGAAGGGACATCACCAGGAATAGAATCTGCTAGTTCCTTCTCTTaGGGCTTTACTGCCTCAGTTACTGTGAAACAGAAAATCTACTGG | + |
|
Preference number: 2 (lower is better) Translates to: EEGTSPGIESASSFS*GFTASVTVKQKIYW Trigger: CCAGTAGATTTTCTGTTTCACAGTAACTGAGGCAGTAAAGCCCAAAGAGAAGGAACTAGCAGATTCTATTCCTGGTGATGTCCCTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | TGTTATTATTGCACTGTTAGGAATGTCTTGCCATGCTGGTCACTGTaGTGGCTCATAGACATCACAGCTGGTTATGACACTGATTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CYYCTVRNVLPCWSL*WLIDITAGYDTDCF Trigger: GAAGCAATCAGTGTCATAACCAGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGTGCAATAATAACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCCGAAACAATGGATGTTaGCATCACCCTTTTATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTRNNGC*HHPFIS Trigger: TGAAATAAAAGGGTGATGTCAACATCCATTGTTTCG...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCTTCTTACCCAGAGAATaGTATTGCCAAGACATTATC | + |
|
Preference number: 2 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTFLPRE*YCQDII Trigger: GATAATGTCTTGGCAATATCATTCTCTGGGTAAGAA...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCTTCTGGGCTGCCATGTaGGCATCAGGAACTCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FHSFPMLSSHVTITDTISFWAAM*ASGTQS Trigger: ACTTTGAGTTCCTGATGCTCACATGGCAGCCCAGAA...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCAAAGGGTGTCTATCATaGAATAACATGCAGGATACT | + |
|
Preference number: 2 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTKGCLS*NNMQDT Trigger: AGTATCCTGCATGTTATTTCATGATAGACACCCTTT...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTACTTAGAAACTCACAGTaGCCCCAAAGAAAACATAAA | + |
|
Preference number: 2 (lower is better) Translates to: EEEEKKLGILTAKSRPALLRNSQ*PQRKHK Trigger: TTTATGTTTTCTTTGGGGGCACTGTGAGTTTCTAAG...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGGACACTGGATCCCTTGGAACTTAGATACAGTAATTTCTGGGCTGCCATGCCTCCTATCTTAGACTaGTGCCCATTCTATAAACAC | + |
|
Preference number: 2 (lower is better) Translates to: KRTLDPLELRYSNFWAAMPPILD*CPFYKH Trigger: GTGTTTATAGAATGGGCAGCAGTCTAAGATAGGAGG...CATGGCAGCCCAGAAATTACTGTATCTAAGTTCCAAGGGATCCAGTGTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTTTTAAAAATAAAAAGTaGTCCAGTTCAGCCGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSFKNKK*SSSAVF Trigger: GAACACGGCTGAACTGGACCACTTTTTATTTTTAAA...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTTGTGTAGAATCCATCCATACATGTACTTACTCACTTGTGTGTGTTAACATGTCTCCCCTTCTACCATaGGAGTCCTGGGAATCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ACVESIHTCTYSLVCVNMSPLLP*ESWESN Trigger: GTTTGATTCCCAGGACTCCCATGGTAGAAGGGGAGA...CATGTTAACACACACAAGTGAGTAAGTACATGTATGGATGGATTCTACACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GCAGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTaGGAAAGACTCTGTTCCTGCCTGTGTCTCTCTACCTCTCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: AVGLLSTYSFIEYTH*ERLCSCLCLSTSLY Trigger: ATACAGAGAGGTAGAGAGACACAGGCAGGAACAGAGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | TGGATCGCTGAACTGGAAGAAAACATTATTGCCTCTGAAATAGCCTaGCTCCCCCAGCTTTGCATAACAATATCCAGATTGCTATTATGC | + |
|
Preference number: 2 (lower is better) Translates to: WIAELEENIIASEIA*LPQLCITISRLLLC Trigger: GCATAATAGCAATCTGGATATTGTTATGCAAAGCTGGGGGAGCAAGGCTATTTCAGAGGCAATAATGTTTTCTTCCAGTTCAGCGATCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTCTGACAACCCAGTGCTaGGAATCCTCCCTGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTLTTQC*ESSLSS Trigger: TGAAGACAGGGAGGATTCTCAGCACTGGGTTGTCAG...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TGCCATGAGGTTCCAAACTGTTTTCCCATTTCTAAAGCTATAATCATAAAGGGTCATCTCCCTTCCTCCTaGACCCTTCTAGAAAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CHEVPNCFPISKAIIIKGHLPSS*TLLESR Trigger: CCTACTTTCTAGAAGGGTTCAGGAGGAAGGGAGATG...ACCCTTTATGATTATAGCTTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGGACACTGGATCCCTTGGAACTTAGATACAGTAATTTCTGGGCTGCCATGCCTATCTTAGACTGCTaGCCATTCTATAAACACCTT | + |
|
Preference number: 2 (lower is better) Translates to: KRTLDPLELRYSNFWAAMPILDC*PFYKHL Trigger: AAGGTGTTTATAGAATGGGCAGCAGTCTAAGATAGG...CATGGCAGCCCAGAAATTACTGTATCTAAGTTCCAAGGGATCCAGTGTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAAGCCCAAGACTATGTTaGTCTAGAATAACAATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SQRPNQDCLSSLMSVSLESPRLC*SRITIS Trigger: TGAAATTGTTATTCTAGAGCAACATAGTCTTGGGCT...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GAATCATACCAAGTTAGCAACAACCAAGCAGGTAACATTCCCAATTaGGGTGTCAGACTCATAAAGGTGAAATTACTGCACCAAAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ESYQVSNNQAGNIPN*GVRLIKVKLLHQSL Trigger: AAGGCTTTGGTGCAGTAATTTCACCTTTATGAGTCTGACACCCAAATTGGGAATGTTACCTGCTTGGTTGTTGCTAACTTGGTATGATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 90 bp | CACATCAGAGAAGTCCATTTCAGAATTCTTACCCAGAGAATGATATaGCCAAGACATTATCACCATTCAGTATTGACAGTCCCCATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: HIREVHFRILTQRMI*PRHYHHSVLTVPMS Trigger: GGACATGGGGACTGTCAATACTGAATGGTGATAATGTCTTGGCAATATCATTCTCTGGGTAAGAATTCTGAAATGGACTTCTCTGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | ATCTTTGCCATGAGAACATTTCCTTTAGTGGTGGTCTACAACCCTTaGACACTGAAATATGACATCTGTGGTATGCAAATGTGTTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IFAMRTFPLVVVYNP*TLKYDICGMQMCWA Trigger: AGCCCAACACATTTGCATACCACAGATGTCATATTTCAGTGTCAAAGGGTTGTAGACCACCACTAAAGGAAATGTTCTCATGGCAAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | GTTGTGGACCTCTTTAGAAATAGTTCTTTGGGTCAATTCCAATCTTaGTTGTCAGCAGTCCAGTCCTTTAGCAAAATACCGACACAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VVDLFRNSSLGQFQS*LSAVQSFSKIPTQV Trigger: GACTTGTGTCGGTATTTTGCTAAAGGACTGGACTGCTGACAACAAAGATTGGAATTGACCCAAAGAACTATTTCTAAAGAGGTCCACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGGAAAAATCACGATTGTTCCAGGAATGGCCCATCCGCCAATTAAAAAGTGGAAATGTTTCCAACTaGCGAAAACTTCATATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: QREKSRLFQEWPIRQLKSGNVSN*RKLHIG Trigger: TCCAATATGAAGTTTTCGTCAGTTGGAAACATTTCC...ACTTTTTAATTGGCGGATGGGCCATTCCTGGAACAATCGTGATTTTTCCCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGGGAAATGTTTCCAACTaGCGAAAACTTCATATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LQSLTRSKDASSTILTTQGNVSN*RKLHIG Trigger: TCCAATATGAAGTTTTCGTCAGTTGGAAACATTTCC...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 90 bp | CTAATAAAGCTTGCCATTCATTCTGGACAGAGGGAAAAATCACGATaGTTCCAGGAATGGCCCATCCGCCAATTAAAAAGTGTTCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: LIKLAIHSGQREKSR*FQEWPIRQLKSVLI Trigger: AATAAGAACACTTTTTAATTGGCGGATGGGCCATTCCTGGAACAATCGTGATTTTTCCCTCTGTCCAGAATGAATGGCAAGCTTTATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 90 bp | CAATCTGACACTAAATCTCATTTTTATTCTCTCTTCCCTCACATGTaGAAGAATGTACGTGGTATGGCAGAGGCAGCACAAGGTTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: QSDTKSHFYSLFPHM*KNVRGMAEAAQGFT Trigger: TGTAAAACCTTGTGCTGCCTCTGCCATACCACGTACATTCTTCAACATGTGAGGGAAGAGAGAATAAAAATGAGATTTAGTGTCAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCCTTAGAAACTCACAGTaGCCCCAAAGAAAACATAAA | + |
|
Preference number: 2 (lower is better) Translates to: ENSNRFSKMEASISKALSLRNSQ*PQRKHK Trigger: TTTATGTTTTCTTTGGGGGCACTGTGAGTTTCTAAG...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTGTGCTAAAGAAACACTaGAGGGTTCCCAGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTVLKKH*RVPRRK Trigger: CTTCCTTCTGGGAACCCTGCAGTGTTTCTTTAGCAC...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | AATGAAGAATATAGAATATTTAACTCAGGGAAAATCCACAAGCTTTaGATCACTAACTGCCATCCAGTCCCTAGTTTGGCACACAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NEEYRIFNSGKIHKL*ITNCHPVPSLAHSR Trigger: CCTACTGTGTGCCAAACTAGGGACTGGATGGCAGTTAGTGATCAAAAGCTTGTGGATTTTCCCTGAGTTAAATATTCTATATTCTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 90 bp | CATAGGGTTGCATGGATCTATACTAAAGTGAACTACTCAGCTAGATaGCAAAGCAGATACAAAATAATCCCCATCCTTCTCCTTCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: HRVAWIYTKVNYSAR*QSRYKIIPILLLHR Trigger: TCTATGAAGGAGAAGGATGGGGATTATTTTGTATCTGCTTTGCAATCTAGCTGAGTAGTTCACTTTAGTATAGATCCATGCAACCCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | GCTTGTGTAGAATCCATCCATACATGTACTTACTCACTTGTGTGTGTTAACATGCAACTCTTTGGCATCTaGCAGGATTCTATTACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ACVESIHTCTYSLVCVNMQLFGI*QDSITC Trigger: ACAAGTAATAGAATCCTGTCAGATGCCAAAGAGTTG...CATGTTAACACACACAAGTGAGTAAGTACATGTATGGATGGATTCTACACAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCGTCATCGTATCTAGGTaGTTAAGGACCTATTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FHSFPMLSSHVTITDTISVIVSR*LRTYLV Trigger: AACCAAATAGGTCCTTAATCACCTAGATACGATGAC...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCCAATTGTCTGTTGGATaGATCAGTGAACTCTTACCT | + |
|
Preference number: 2 (lower is better) Translates to: FHSFPMLSSHVTITDTISQLSVG*ISELLP Trigger: AGGTAAGAGTTCACTGATTCATCCAACAGACAATTG...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTGCCAAAGATCACAGATaGCCAATGACTGGCCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTAKDHR*PMTGLK Trigger: TTTTAGGCCAGTCATTGGGCATCTGTGATCTTTGGC...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTTTCTTTGCAATTGCGTaGTCTAGAATGATATCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTFFAIA*SRMISP Trigger: GGGGGATATCATTCTAGAGCACGCAATTGCAAAGAA...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCTCTGCCATTTCCCAGTaGAATAAGATTAGAGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: FHSFPMLSSHVTITDTISSAISQ*NKIRDE Trigger: TTCATCTCTAATCTTATTCCACTGGGAAATGGCAGA...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TGGAGCTGTGACAAGCTGGCTGGCCCTGAGGCTGCATaGACACCTGGGGGAAGGAGCGCTGTAACTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WSCDKLAGPEAA*TPGGRSAVTED Trigger: GTCCTCAGTTACAGCGCTCCTTCCCCCAGGTGTGCATGCAGCCTCAGGGCCAGCCAGCTTGTCACAGCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CAGACCCTCTGGGAGTCAGTGCCCACTGCCCAGCACTaGGCACCACACTATGTGCTTCACCTGGGCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTLWESVPTAQH*APHYVLHLGIS Trigger: TGAGATGCCCAGGTGAAGCACATAGTGTGGTGCCCAGTGCTGGGCAGTGGGCACTGACTCCCAGAGGGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GCGAAGCATATTCCTCCTGATGAGCAAGGCCAGGGGTaGACACGGAGCCACGTTCCCACCCCTTCACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AKHIPPDEQGQG*TRSHVPTPSPA Trigger: TGCTGGTGAAGGGGTGGGAACGTGGCTCCGTGTTCACCCCTGGCCTTGCTCATCAGGAGGAATATGCTTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GGGCTGCCTTCTCTGGATTGGTCCTCCATCACGGGGTaGACCGCATTCTACCAGGCACGCGGATGTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLPSLDWSSITG*TAFYQARGCDG Trigger: ACCATCACATCCGCGTGCCTGGTAGAATGCGGTTCACCCCGTGATGGAGGACCAATCCAGAGAAGGCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCGAGTGCTGGGATTAAAAGTGTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LPSAGIKSVHH Trigger: GTGGTGCACACTTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GGGAGGGCGGGCGGGCGGGCAAAGAAGGGCCTCTCTTaGATGTACCTGGAACAGACTCTCCACTACATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GRAGGRAKKGLS*MYLEQTLHYIV Trigger: TACTATGTAGTGGAGAGTCTGTTCCAGGTACATCCAAGAGAGGCCCTTCTTTGCCCGCCCGCCCGCCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ACCAAGGCAGAGACCTGTACAGCTGAGTTCTGCGCATaGAGCTGTGACAAGCTGGCTGGCCCTGAGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TKAETCTAEFCA*SCDKLAGPEAA Trigger: TGCAGCCTCAGGGCCAGCCAGCTTGTCACAGCTCCATGCGCAGAACTCAGCTGTACAGGTCTCTGCCTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GCAGCAGGAGCATGCAGCCTGAGGGGTGCACTGATCTaGGTGGGCAGAGGGGGACACACTAAAGAAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAGACSLRGALI*VGRGGHTKERS Trigger: AGACCTTTCTTTAGTGTGTCCCCCTCTGCCCACTCAGATCAGTGCACCCCTCAGGCTGCATGCTCCTGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CAGTGCCCACTGCCCAGCACTGGGCACCACACTATGTaGTTCACCTGGGCATCTCATTCCATCCCTCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QCPLPSTGHHTM*FTWASHSIPPN Trigger: GTTAGGAGGGATGGAATGAGATGCCCAGGTGAAGCACATAGTGTGGTGCCCAGTGCTGGGCAGTGGGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTGCCCAGCACTGGGCACCACACTATGTGCTTCACCTaGGCATCTCATTCCATCCCTCCTAACAGCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPSTGHHTMCFT*ASHSIPPNSPA Trigger: AGCTGGGCTGTTAGGAGGGATGGAATGAGATGCCCAGGTGAAGCACATAGTGTGGTGCCCAGTGCTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGIKSV Trigger: CACACTTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCATAAATCCACCTGCCTTTaGCTCCCGAGTGCTGGAATTAAAGGCGTGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTHKSTCL*LPSAGIKGVCH Trigger: GTGGCACACGCCTTTAATTCCAGCACTCGGGAGGCAAAGGCAGGTGGATTTATGAGTTCGAGGCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CCTTCTACCATGGGAGTCCTGGGAATCAAACTCGGGTaGTCAGGCAACTGCCTTTACCAGCCGAGCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSTMGVLGIKLG*SGNCLYQPSHL Trigger: GAGATGGCTCGGCTGGTAAAGGCAGTTGCCTGACCACCCGAGTTTGATTCCCAGGACTCCCATGGTAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTGTACGTCAGCAGACTAGGCACGGTGCCTATGGCGTaGCATAGGGAAGACTTCACACTCACTCTCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: LYVSRLGTVPMA*HREDFTLTLPP Trigger: AGGTGGGAGAGTGAGTGTGAAGTCTTCCCTATGCCACGCCATAGGCACCGTGCCTAGTCTGCTGACGTACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AACTTCAAGGAGGAGGGCAAACACCCTTCTCTGTGGTaGTCCCTGTACGTCAGCAGACTAGGCACGGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NFKEEGKHPSLW*SLYVSRLGTVP Trigger: AGGCACCGTGCCTAGTCTGCTGACGTACAGGGACCACCACAGAGAAGGGTGTTTGCCCTCCTCCTTGAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GACAACTTCAAGGAGGAGGGCAAACACCCTTCTCTGTaGTGGTCCCTGTACGTCAGCAGACTAGGCACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DNFKEEGKHPSL*WSLYVSRLGTV Trigger: CACCGTGCCTAGTCTGCTGACGTACAGGGACCACCACAGAGAAGGGTGTTTGCCCTCCTCCTTGAAGTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGAGAGAAGGACTCTCTaGGGGCTGGAGAGATGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLERRTL*GLERWL Trigger: GAGCCATCTCTCCAGCCCCAAGAGAGTCCTTCTCTC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TGGTTGAAGGCACATGACCTAGCTTCTCCGGCACTCTaGCACTGCTTTCTACCTCTGACCCGGGCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WLKAHDLASPAL*HCFLPLTRALC Trigger: ACACAGAGCCCGGGTCAGAGGTAGAAAGCAGTGTCAGAGTGCCGGAGAAGCTAGGTCATGTGCCTTCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CAGCTGCAGTCTGGTCCACTCAGCAGTCACCCCTCATaGATCAGCGATGGCAAGCCACTGGAATATCACGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLQSGPLSSHPS*ISDGKPLEYHE Trigger: CTCGTGATATTCCAGTGGCTTGCCATCGCTGATTCATGAGGGGTGACTGCTGAGTGGACCAGACTGCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GGCTGCATGCACACCTGGGGGAAGGAGCGCTGTAACTaGGGACACAAAGGCTATTCCAGGTTACTTCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCMHTWGKERCN*GHKGYSRLLPR Trigger: CCTAGGAAGTAACCTGGAATAGCCTTTGTGTCCTCAGTTACAGCGCTCCTTCCCCCAGGTGTGCATGCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TTGTACCATGTGAGCAGGCTGGTGCTAAAGAAACACTaGAGGGTTCCCAGAAGGAAGCTCCCTGGACCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LYHVSRLVLKKH*RVPRRKLPGPH Trigger: GTGGGGTCCAGGGAGCTTCCTTCTGGGAACCCTGCAGTGTTTCTTTAGCACCAGCCTGCTCACATGGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTaGTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AGEMAQWVRAPD*SSEGQEFKSQQ Trigger: TTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TGGTGCCAGGTGAAGCAATACAGACTAGCAAGGCGGTaGAAGGCAAATCAATGCCAGAGCCTCCTCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: WCQVKQYRLARR*KANQCQSLLPL Trigger: CAGTGGGAGGAGGCTCTGGCATTGATTTGCCTTGCACCGCCTTGCTAGTCTGTATTGCTTCACCTGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GAAAGCTGGGGCAGTGTTCTGATGGGTTTGATGAGGTaGTTGCTTGAAATACCGTGTGCACGCTGCCGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: ESWGSVLMGLMR*LLEIPCARCRV Trigger: GACGCGGCAGCGTGCACACGGTATTTCAAGCAAGCACCTCATCAAACCCATCAGAACACTGCCCCAGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCTACTTCCCCAAGGTATCACTTGCTCTGCTCTGCCTaGGCCATTCCTACTCCAATAGGCTGGCCCTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: STSPRYHLLCSA*AIPTPIGWPSW Trigger: CCATGAGGGCCAGCCTATTGGAGTAGGAATGGCCCAGGCAGAGCAGAGCAAGTGATACCTTGGGGAAGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGGAAACAGGTAGTAGATCCCTGGGGCTCACTAACCAGCCACCCCTGCCTCTTCCATCCCAGCTATaGTTTCCTTCTTCACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EVETGSRSLGLTNQPPLPLPSQL*FPSSPE Trigger: CTCAGGTGAAGAAGGAAACAATAGCTGGGATGGAAG...AGGCAGGGGTGGCTGGTTAGTGAGCCCCAGGGATCTACTACCTGTTTCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAGTGCCAGCAACTAAGAACCACGTGCCCAGTCACATaGGCCTGCACTGGGCATGTCCCACTGCAATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: KCQQLRTTCPVT*ACTGHVPLQSQ Trigger: TTGTGATTGCAGTGGGACATGCCCAGTGCAGGCTCATGTGACTGGGCACGTGGTTCTTAGTTGCTGGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTCTTCCTTCAGATGCTTCGCTATTGTGGAACCAGGTaGGGTGGTAAGAGTGAAGCTGCCGCTCCCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VFLQMLRYCGTR*GGKSEAAAPPE Trigger: TTCTGGGGGAGCGGCAGCTTCACTCTTACCACCTCACCTGGTTCCACAATAGCGAAGCATCTGAAGGAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGAGCCCAGGCAGATGGTAAGGACGGCATCCATCTTTaGTCCTCATCTGAGATTTTGAGGTCCCGAGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RAQADGKDGIHL*SSSEILRSRVD Trigger: GTCCACTCGGGACCTCAAAATCTCAGATGAGGAGCAAAGATGGATGCCGTCCTTACCATCTGCCTGGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GGAGCTGTCTTGGAAATCATCATGCTCTCAGATTCCTaGTGTCCTTGCATGACCCTGACACCGCCTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GAVLEIIMLSDS*CPCMTLTPPEQ Trigger: CTGCTCAGGCGGTGTCAGGGTCATGCAAGGACAGCAGGAATCTGAGAGCATGATGATTTCCAAGACAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TTTGTCTACTTCCCCAAGGTATCACTTGCTCTGCTCTaGCTGGGCCATTCCTACTCCAATAGGCTGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FVYFPKVSLALL*LGHSYSNRLAL Trigger: GAGGGCCAGCCTATTGGAGTAGGAATGGCCCAGGCAGAGCAGAGCAAGTGATACCTTGGGGAAGTAGACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GCACCTGACTTCCTCTGTCATCTGTGTTCAGTGTCCTaGTGGTTCTCCATGCTTGTCTCCCACACAAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: APDFLCHLCSVS*WFSMLVSHTSP Trigger: GGGACTTGTGTGGGAGACAAGCATGGAGAACCAGCAGGACACTGAACACAGATGACAGAGGAAGTCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AAAGAAACACTGCAGGGTTCCCAGAAGGAAGCTCCCTaGACCCCACAGCACCTAATGCACTGTGTGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KETLQGSQKEAP*TPQHLMHCVQG Trigger: TCCTTGCACACAGTGCATTAGGTGCTGTGGGGTCCAGGGAGCTTCCTTCTGGGAACCCTGCAGTGTTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TTGGGAGGCTCGCCCATGTCAGCTGCTTCATGTACCTaGAACAGACTGGGGCAGGATTTGAACCAAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGGSPMSAASCT*NRLGQDLNQVL Trigger: GAGAACTTGGTTCAAATCCTGCCCCAGTCTGTTCCAGGTACATGAAGCAGCTGACATGGGCGAGCCTCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCGCAGACCAGGGCCTATaGCACAGCAGAGGGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTADQGL*HSRGKP Trigger: AGGCTTCCCTCTGCTGTGCAATAGGCCCTGGTCTGC...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AGGACGGCATCCATCTTTGCTCCTCATCTGAGATTTTaGGGTCCCGAGTGGACTCTGCCTCTTCACAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RTASIFAPHLRF*GPEWTLPLHRS Trigger: ACTCCTGTGAAGAGGCAGAGTCCACTCGGGACCTCAAAATCTCAGATGAGGAGCAAAGATGGATGCCGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GCCCAGCTTCTTCTCAAGAATTCCTCTTTCCAGAGGTaGGTGGGGCTGGAAGAGCACCTGAGGCTGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: AQLLLKNSSFQR*VGLEEHLRLNS Trigger: AGAATTCAGCCTCAGGTGCTCTTCCAGCCCCACTCACCTCTGGAAAGAGGAATTCTTGAGAAGAAGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGCATTTAAAAGCACTGACTaGTCCTCCAGAGGCCCTGAGTTCGATTCTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGSAFKSTD*SSRGPEFDSQQ Trigger: TTGCTGAGAATCGAACTCAGGGCCTCTGGAGGAGCAGTCAGTGCTTTTAAATGCTGAGCCATCTCTCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TTCAGGAGTCCTGTCCTTTTCCTTCTTCTCCAGGGCTaGAGCTTATTCAGCAACTGCTCTGGAGCCGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: FRSPVLFLLLQG*SLFSNCSGAGI Trigger: AATGCCGGCTCCAGAGCAGTTGCTGAATAAGCTGCAGCCCTGGAGAAGAAGGAAAAGGACAGGACTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ACTGAGGACAGCTCTCAGGTTCGTAACTGTAATGAGTaGCAACGCATCAGCAGTGAGACCACTCGGGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: TEDSSQVRNCNE*QRISSETTRAF Trigger: GAATGCCCGAGTGGTCTCACTGCTGATGCGTTGGCACTCATTACAGTTACGAACCTGAGAGCTGTCCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TTGGAAATCATCATGCTCTCAGATTCCTGCTGTCCTTaGATGACCCTGACACCGCCTGAGCAGCATCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LEIIMLSDSCCP*MTLTPPEQHLR Trigger: CCTCAGATGCTGCTCAGGCGGTGTCAGGGTCATGCAAGGACAGCAGGAATCTGAGAGCATGATGATTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GTTTATTTAGGAGGCACGCACAAGTGGCAGCATGCATaGGGAGGTCAGAGGACAACAGAAGAGAGTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VYLGGTHKWQHA*GGQRTTEESWS Trigger: GGACCAACTCTCTTCTGTTGTCCTCTGACCTCCGCATGCATGCTGCCACTTGTGCGTGCCTCCTAAATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GCTATTCCAGGTTACTTCCTAGGGCCTACAACAGCCTaGCAAAGCTTCTCAACGCCCCAATCAAGACTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AIPGYFLGPTTA*QSFSTPQSRLP Trigger: AGGCAGTCTTGATTGGGGCGTTGAGAAGCTTTGGCAGGCTGTTGTAGGCCCTAGGAAGTAACCTGGAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCGCTGCAGAGAACTGAGCCTGGAAAGACCCAACCCTaGGCTGAGCGGTATCACTTCATACTCAGTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLQRTEPGKTQP*AERYHFILSLS Trigger: GCTTAAACTGAGTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCTGCAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CCA 72 bp | ATAGCAGTTGGTTCTCCCCTTCTACCATGGGAGTCCTaGGAATCAAACTCGGGTGGTCAGGCAACTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IAVGSPLLPWES*ESNSGGQATAF Trigger: AAAGGCAGTTGCCTGACCACCCGAGTTTGATTCCCAGGACTCCCATGGTAGAAGGGGAGAACCAACTGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCAGTTTTAAGTTTAGGGGCTGGTGAGATGGCTCAGTaGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVLSLGAGEMAQ*VRAPDCSSEGQ Trigger: CTGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCTAAACTTAAAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CATGCATGCGGAGGTCAGAGGACAACAGAAGAGAGTTaGTCCTCCCCTTCCGGCATATGGATTTTGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: HACGGQRTTEES*SSPSGIWILEM Trigger: CATCTCCAAAATCCATATGCCGGAAGGGGAGGACCAACTCTCTTCTGTTGTCCTCTGACCTCCGCATGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACCGTTATTTCCCCTTCTaGAAGCCCTGGGCAGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHRYFPF*KPWAEV Trigger: TACCTCTGCCCAGGGCTTCAAGAAGGGGAAATAACG...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACAACAACTTCGAGGAGTaGCTTCCCTCCTCCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHNNFEE*LPSSHH Trigger: ATGGTGGGAGGAGGGAAGCAACTCCTCGAAGTTGTT...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAAGATTCCTGCTGTCCTaGCATGACCCTGACACCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQRPNQDCLSSLMSVSLERFLLS*HDPDTA Trigger: GGCGGTGTCAGGGTCATGCAAGGACAGCAGGAATCT...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTAAAGGAGTTCACTGACTGCATAGGTACCCTCTTCCATCCCAGCTATTGTTCCCCACCTGTCTCCTaGGGAGCATGGATACCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ALKEFTDCIGTLFHPSYCSPPVS*GAWIPF Trigger: AAATGGTATCCATGCTCCCAAGGAGACAGGTGGGGA...ACAATAGCTGGGATGGAAGAGGGTACCTATGCAGTCAGTGAACTCCTTTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAAAGAGCCAGTTTCCGCTaGCTGGGGAAGGTGTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SQRPNQDCLSSLMSVSLERASFR*LGKVWF Trigger: AAACCACACCTTCCCCAGCAAGCGGAAACTGGCTCT...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAAGTTCAAAGCTCTTCCTCCAGCGTAGGCCAGCCATaGGCCCTAAAGGAGTTCACTGACTGCATAGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: KVQSSSSSVGQP*ALKEFTDCIGT Trigger: GGTACCTATGCAGTCAGTGAACTCCTTTAGGGCTCATGGCTGGCCTACGCTGGAGGAAGAGCTTTGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | ATTAAAGTGTGTGCCTTGCTATCACAAGGACCTGAGTaGGGTCCCCAGAGCACAGTTCAACCGCTATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IKVCALLSQGPE*GPQSTVQPLSQ Trigger: CTGGGATAGCGGTTGAACTGTGCTCTGGGGACCTCACTCAGGTCCTTGTGATAGCAAGGCACACACTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CACAAACGCAGAAGCTGTGAAGAGCCAGAAGCAGAGTaGTGTCTTTCCCTGGACGCAAAGGTCACTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HKRRSCEEPEAE*CLSLDAKVTAV Trigger: AACAGCAGTGACCTTTGCGTCCAGGGAAAGACATCACTCTGCTTCTGGCTCTTCACAGCTTCTGCGTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GAAAGAGAGATTAATCCCAGGGCTCCCTGTATAATCTaGCATCGGCTCAACAGGTCTGGAGGGTCTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EREINPRAPCII*HRLNRSGGSPL Trigger: GAGAGGAGACCCTCCAGACCTGTTGAGCCGATGTCAGATTATACAGGGAGCCCTGGGATTAATCTCTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AGAAACACCATGCCCGCCCACCAATGCCTTCATTTTTaGTTTCCTGGTTTCCAGAAGGGCAGGCGAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RNTMPAHQCLHF*FPGFQKGRRGN Trigger: ATTCCCTCGCCTGCCCTTCTGGAAACCAGGAAATCAAAAATGAAGGCATTGGTGGGCGGGCATGGTGTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GCCCCCGGGAGCCTGAAGATAAGCATACTCAATGTCTaGTGCTCCATCTCCAACCTCATGAAACCTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: APGSLKISILNV*CSISNLMKPEF Trigger: AAACTCAGGTTTCATGAGGTTGGAGATGGAGCAGCAGACATTGAGTATGCTTATCTTCAGGCTCCCGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGCAGAGTGATGTCTTTCCCTGGACGCAAAGGTCACTaGTGTTTTCGTCCATTCATTCCAGCTGACCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRVMSFPGRKGH*CFRPFIPADHV Trigger: GACGTGGTCAGCTGGAATGAATGGACGAAAACAGCAGTGACCTTTGCGTCCAGGGAAAGACATCACTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CGCCCTCACTCCCCAGCTCTGTACAAGATGCTTCAGTaGAGCTTACTAGGTAAATGTCACAGTTCCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPHSPALYKMLQ*SLLGKCHSSMP Trigger: TGGCATGGAACTGTGACATTTACCTAGTAAGCTGCACTGAAGCATCTTGTACAGAGCTGGGGAGTGAGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CAGTCCTTTAGCAAAATACCGACACAAGTCAGCAGCTaGAGTCTGGTCCACTCAGCAGTCACCCCTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSFSKIPTQVSS*SLVHSAVTPHE Trigger: TTCATGAGGGGTGACTGCTGAGTGGACCAGACTGCAGCTGCTGACTTGTGTCGGTATTTTGCTAAAGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGACTAAGAGAGAGACACTGTCTACTTTATCCCGGCTaGACACCTGGTGTGGAGCAGGTCCCAATACATCGA | + |
|
Preference number: 3 (lower is better) Translates to: RLRERHCLLYPG*TPGVEQVPIHR Trigger: TCGATGTATTGGGACCTGCTCCACACCAGGTGTGCAGCCGGGATAAAGTAGACAGTGTCTCTCTCTTAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CTCAGAGCCTTAACTCAAGAGACACAACTACAGGCTTaGTTCCATGCAAGCCATAAGGCAGCAGGAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LRALTQETQLQA*FHASHKAAGAC Trigger: GCATGCTCCTGCTGCCTTATGGCTTGCATGGAAGCAAGCCTGTAGTTGTGTCTCTTGAGTTAAGGCTCTGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CAGAGCATCATTCTCTCATCTCTCATCGGCTCTCCATaGAGGCATCTCTCCCAAACTCCCAGTTTGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSIILSSLIGSP*RHLSQTPSLQS Trigger: ACTCTGCAAACTGGGAGTTTGGGAGAGATGCCTCCATGGAGAGCCGATGAGAGATGAGAGAATGATGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GGATCTAGAGCCAGTTTCCGCTTGCTGGGGAAGGTGTaGTTTTCTTCTGTGTGTAAACTGGCCACACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSRASFRLLGKV*FSSVCKLATLP Trigger: AGGAAGTGTGGCCAGTTTACACACAGAAGAAAACCACACCTTCCCCAGCAAGCGGAAACTGGCTCTAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AAGAACACAGAATACTCACACTCCCTGATGCCCCTCTaGGTGAGAGCAACACTGGCCCCAGAGAATTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KNTEYSHSLMPL*VRATLAPENLV Trigger: CACTAAATTCTCTGGGGCCAGTGTTGCTCTCACCCAGAGGGGCATCAGGGAGTGTGAGTATTCTGTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TTAGCAAAATACCGACACAAGTCAGCAGCTGCAGTCTaGTCCACTCAGCAGTCACCCCTCATGAATCAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LAKYRHKSAAAV*STQQSPLMNQR Trigger: TCGCTGATTCATGAGGGGTGACTGCTGAGTGGACCAGACTGCAGCTGCTGACTTGTGTCGGTATTTTGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AGCGTCCAACTGTACACCCATTTTACATATGACCCTTaGGAGGCTCGCCCATGTCAGCTGCTTCATGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: SVQLYTHFTYDP*EARPCQLLHVP Trigger: AGGTACATGAAGCAGCTGACATGGGCGAGCCTCCCAAGGGTCATATGTAAAATGGGTGTACAGTTGGACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCTCCTCTTGGCGGGTTTaGTTTGGAAAATGGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLSSWRV*FGKWRL Trigger: CAATCTCCATTTTCCAAACAAAACCCGCCAAGAGGA...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CCAAGTAACAGCAGCTCACAGTTAGAGCAGGCAAAGTaGCAGTCTCAGGGCTCAAGGTCAGAATTCAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSNSSSQLEQAK*QSQGSRSEFKA Trigger: GGCTTTGAATTCTGACCTTGAGCCCTGAGACTGTCACTTTGCCTGCTCTAACTGTGAGCTGCTGTTACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CAAAGGTCACTGCTGTTTTCGTCCATTCATTCCAGCTaGCCACGTCTCCCTACGCTGACTGTCCCATTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: QRSLLFSSIHSS*PRLPTLTVPFR Trigger: TCTAAATGGGACAGTCAGCGTAGGGAGACGTGGTCAGCTGGAATGAATGGACGAAAACAGCAGTGACCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | ACATGCCTCAAACAACCCTGTATGGTTGAAGGCACATaGCCTAGCTTCTCCGGCACTCTGACACTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TCLKQPCMVEGT*PSFSGTLTLLS Trigger: AGAAAGCAGTGTCAGAGTGCCGGAGAAGCTAGGTCATGTGCCTTCAACCATACAGGGTTGTTTGAGGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTCTCTGTGGGTAAGCGTACTTGTCATGAAAAAGCCTaGCCACCTGAGTTCGATTCCTTGGAACCCGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LSVGKRTCHEKA*PPEFDSLEPVL Trigger: CAGTACGGGTTCCAAGGAATCGAACTCAGGTGGTCAGGCTTTTTCATGACAAGTACGCTTACCCACAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTCCCCCTGGAAGTCTGCATAACACCTCTGACATCATaGAAGCTAGATACTGGAGAGGAAGTTTCCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPLEVCITPLTS*KLDTGEEVSWS Trigger: GGACCAGGAAACTTCCTCTCCAGTATCTAGCTTTCATGATGTCAGAGGTGTTATGCAGACTTCCAGGGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CACAGTGTAAATACATCATATCCAGGACATCTGCTATaGAACCTCCAAAGGGGCCGAGACCCACAGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSVNTSYPGHLL*NLQRGRDPQVE Trigger: CTCAACCTGTGGGTCTCGGCCCCTTTGGAGGTTGCATAGCAGATGTCCTGGATATGATGTATTTACACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ACAATGCAAGCAAATCCTAGTTATCTTCTGCGTCGCTaGCTTGACGGTCCTGGGAAACGTGAAACTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: TMQANPSYLLRR*LDGPGKRETAP Trigger: AGGTGCAGTTTCACGTTTCCCAGGACCGTCAAGGCAGCGACGCAGAAGATAACTAGGATTTGCTTGCATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CTTCCCTGCAGAGTGGAATGTTTCAAGTGGAGAAACTaGTACTCAACACTACCAAGGGAGGGCTCAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPCRVECFKWRN*YSTLPREGSAR Trigger: TCTTGCTGAGCCCTCCCTTGGTAGTGTTGAGTAGCAGTTTCTCCACTTGAAACATTCCACTCTGCAGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TGGGCCTATTGGACCACAAGTTTATGTAGCCAGGAATaGGGTCATCACGAATTTCTGGTCCTCCACCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WAYWTTSLCSQE*GHHEFLVLHPC Trigger: ACAAGGGTGGAGGACCAGAAATTCGTGATGACCCCATTCCTGGCTACATAAACTTGTGGTCCAATAGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CATGCCCGCCCACCAATGCCTTCATTTTTGATTTCCTaGTTTCCAGAAGGGCAGGCGAGGGAATACAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: HARPPMPSFLIS*FPEGQAREYNS Trigger: AGAATTGTATTCCCTCGCCTGCCCTTCTGGAAACCAGGAAATCAAAAATGAAGGCATTGGTGGGCGGGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GGATTTCCTGAGACACCAGTGGGTGCTGCAGCTTTGTaGCCTAGACAACAACAAACAGGACTATTTGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GFPETPVGAAAL*PRQQQTGLFVE Trigger: CTCCACAAATAGTCCTGTTTGTTGTTGTCTAGGCCACAAAGCTGCAGCACCCACTGGTGTCTCAGGAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTCGGTAACATTCCCAATTaGGGTGTCAGACTCATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTEPGKTQPWAERYHFILGNIPN*GVRLIK Trigger: CTTTATGAGTCTGACACCCAAATTGGGAATGTTACC...GAGTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGCTCTCTCCCGCCCCCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTACCCAGAGAATGATATaGCCAAGACATTATCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLSPAPCLCVCVCVCVCTQRMI*PRHYHH Trigger: ATGGTGATAATGTCTTGGCAATATCATTCTCTGGGT...ACACACACACACACACACACACACACAGAGACAGGGGGCGGGAGAGAGCAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTAATCTCCTTCTCTCACTaGAATGCCTGGAGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EEEEKKLGILTAKSRPALISFSH*NAWRAP Trigger: AGGAGCTCTCCAGGCATTCAAGTGAGAGAAGGAGAT...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCTCAGAAACTCTGCAATaGGCAAGCCCTGAGGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTSETLQ*ASPEDL Trigger: CAGATCCTCAGGGCTTGCCAATTGCAGAGTTTCTGA...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCCTAAACACTCAAGTTCCCCTCGTGGTCTACAACCCTTaGACACTGAAATATGACATC | + |
|
Preference number: 3 (lower is better) Translates to: AIMPLPVGFPVLNTQVPLVVYNP*TLKYDI Trigger: GATGTCATATTTCAGTGTCAAAGGGTTGTAGACCAC...GAGGGGAACTTGAGTGTTTAGGACTGGGAAGCCGACTGGAAGGGGCATAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTGGTCAATTCCAATCTTaGTTGTCAGCAGTCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSGQFQS*LSAVQS Trigger: GGACTGGACTGCTGACAACAAAGATTGGAATTGACC...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTCCTCCAAAGCACAAGTCAGTGTGGTTGTAGCCACTaGGTGTTCAGATGCAGGTGTCATAGCTCCTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLQSTSQCGCSH*VFRCRCHSSFN Trigger: ATTGAAGGAGCTATGACACCTGCATCTGAACACTCAGTGGCTACAACCACACTGACTTGTGCTTTGGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GCTTATCTAACCTTGAGGAGGCAGGGTAGACCCCTGTaGACCTCCTTTCATTCCTTTCCTAAGGCTACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AYLTLRRQGRPL*TSFHSFPKATL Trigger: AAGAGTAGCCTTAGGAAAGGAATGAAAGGAGGTTCACAGGGGTCTACCCTGCCTCCTCAAGGTTAGATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ACGTGGTGGCTCAAAACCATCTGTAATGGGATCCAATaGCCTCTTCTGGTGTGTCTAAAGACAGCTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWWLKTICNGIQ*PLLVCLKTATV Trigger: CACTGTAGCTGTCTTTAGACACACCAGAAGAGGGCATTGGATCCCATTACAGATGGTTTTGAGCCACCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CTCCCAGAAGGCTCAAGTCCTCCTATCTTAGACTGCTaGCCATTCTATAAACACCTTAACCACCTATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPEGSSPPILDC*PFYKHLNHLSL Trigger: CAGGGATAGGTGGTTAAGGTGTTTATAGAATGGGCAGCAGTCTAAGATAGGAGGACTTGAGCCTTCTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ACTCTGGACCTGCAATATTCCAGTCCTCTGTATCACTaGAATTCTCTCAGGCCATCAGTCTTTACAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLDLQYSSPLYH*NSLRPSVFTAQ Trigger: CTGGGCTGTAAAGACTGATGGCCTGAGAGAATTGCAGTGATACAGAGGACTGGAATATTGCAGGTCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TACTGGATTGCTTACAGGGGTAAATGTTGGCTTAGATaGTTCAACCTCCCTTCTAGCCCATCACCCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YWIAYRGKCWLR*FNLPSSPSPTR Trigger: TCTGGTGGGTGATGGGCTAGAAGGGAGGTTGAAGCATCTAAGCCAACATTTACCCCTGTAAGCAATCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGAGGGGGACACACTAAAGAAAGGTCTTCCTTCAGATaGTTCGCTATTGTGGAACCAGGTGAGGTGGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGGHTKERSSFR*FAIVEPGEVVR Trigger: TCTTACCACCTCACCTGGTTCCACAATAGCGAAGCATCTGAAGGAAGACCTTTCTTTAGTGTGTCCCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CAGCCTGCCAAAGCTTCTCAACGCCCCAATCAAGACTaGCTCTCTTCCCTAATGAGTGTGTCTCTTGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QPAKASQRPNQD*LSSLMSVSLEI Trigger: AATTTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGAAGCTTTGGCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CATTTAAACACAGGGAGAGAAGGACTCTCTTGGGGCTaGAGAGATGGCTCAGCATTTAAAAGCACTGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLNTGREGLSWG*RDGSAFKSTDC Trigger: GCAGTCAGTGCTTTTAAATGCTGAGCCATCTCTCCAGCCCCAAGAGAGTCCTTCTCTCCCTGTGTTTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AGAAACACAAAACACACAAAACCAGAATTCGCGCATTaGCACTTGCGCGAGGCCACTTACCTGCTTGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RNTKHTKPEFAH*HLREATYLLVD Trigger: GTCTACAAGCAGGTAAGTGGCCTCGCGCAAGTGCCAATGCGCGAATTCTGGTTTTGTGTGTTTTGTGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTTGGGACTGGGATTTTTGTTTTGCTTCGTTTCCACTaGTGGGCCATCAGCTATGTTACAATGACAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGTGIFVLLRFH*WAISYVTMTGR Trigger: CCTGCCTGTCATTGTAACATAGCTGATGGCCCACCAGTGGAAACGAAGCAAAACAAAAATCCCAGTCCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AGTCAGAAACTCTGCAATTGGCAAGCCCTGAGGATCTaGGGCTTGGGACTGGGATTTTTGTTTTGCTTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SQKLCNWQALRI*GLGLGFLFCFV Trigger: AACGAAGCAAAACAAAAATCCCAGTCCCAAGCCCCAGATCCTCAGGGCTTGCCAATTGCAGAGTTTCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CCTCCCACCATATTAAGTCTGTCAGGTCATCAGGATTaGCAAGAAGCATCTAAACCGGCCAAGTCATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPTILSLSGHQD*QEASKPAKSSP Trigger: AGGAGATGACTTGGCCGGTTTAGATGCTTCTTGCCAATCCTGATGACCTGACAGACTTAATATGGTGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AAGGACTTCACTAAGTGGCCTGTCTTGCCATCCTCCTaGATCTTGTACTTTAGGAGCACGAAGCACAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: KDFTKWPVLPSS*ILYFRSTKHKM Trigger: CATCTTGTGCTTCGTGCTCCTAAAGTACAAGATCCAGGAGGATGGCAAGACAGGCCACTTAGTGAAGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AAAGGAAAGCTTCCCTGCAGAGTGGAATGTTTCAAGTaGAGAAACTGCTACTCAACACTACCAAGGGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KGKLPCRVECFK*RNCYSTLPREG Trigger: GCCCTCCCTTGGTAGTGTTGAGTAGCAGTTTCTCCACTTGAAACATTCCACTCTGCAGGGAAGCTTTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTTCAACCTCTGGGAGACAAGCCAGAGCAACAGCAATaGCCTGTATTGGTTTCAGAGTCTCTTGGATCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LQPLGDKPEQQQ*PVLVSESLGST Trigger: AGTAGATCCAAGAGACTCTGAAACCAATACAGGCCATTGCTGTTGCTCTGGCTTGTCTCCCAGAGGTTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCCATCCAGTCCCTAGTTaGGCACACAGTAGGTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTHPVPS*AHSRFS Trigger: TGAAAACCTACTGTGTGCCAAACTAGGGACTGGATG...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTACAGGTTATGAGCCATaGTGCCACATCATCTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSTGYEP*CHIISV Trigger: TACTGAGATGATGTGGCACAATGGCTCATAACCTGT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATGAAGCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTTGAGCCACAAAAATCCCAACTCTTaGGCATCTGACAGGATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GDEAQPSGFAVSAFLLSHKNPNS*ASDRIL Trigger: TAGAATCCTGTCAGATGCCAAAGAGTTGGGATTTTT...GTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGCTTCATCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTACCAAGTCCTCCTCCATaGCAACTTTTAATCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EEEEKKLGILTAKSRPALPSPPP*QLLITE Trigger: CTCAGTGATTAAAAGTTGCAATGGAGGAGGACTTGG...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGCCTAAAAGCAATTGGCTTCTGGAGGAAAGGAATGAGGAACTGTGGGAGGAGTGTACCAAAGACATaGGAAAGCCATTCTCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGLKAIGFWRKGMRNCGRSVPKT*ESHSHV Trigger: CACATGAGAATGGCTTTCCAATGTCTTTGGTACACT...CCTCCCACAGTTCCTCATTCCTTTCCTCCAGAAGCCAATTGCTTTTAGGCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTATCAAATGTTTATTTTaGTCTGGAGGCGGGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSIKCLF*SGGGRS Trigger: TGACCTCCCGCCTCCAGACAAAAATAAACATTTGAT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTGCCATGTGAGCATCAGGAACTCAAAGTGGGTCCTTaGAAAAAGCAGGCAGTGTTCTTAACTGCTAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCEHQELKVGP*KKQAVFLTAKP Trigger: TGGCTTAGCAGTTAAGAACACTGCCTGCTTTTTTCAAGGACCCACTTTGAGTTCCTGATGCTCACATGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CATGGGTGTTTTCCCTGCATGCATGTAAGTGTACCATaGACATGCCTGTTGCCTAACAGGACCAGAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HGCFPCMHVSVP*TCLLPNRTRKG Trigger: TCCTTTTCTGGTCCTGTTAGGCAACAGGCATGTTCATGGTACACTTACATGCATGCAGGGAAAACACCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TTCATCCCAGAGATACCACTGGAAATTCTGGTGAGTTaGAACTTCAAAGGGCTCCGTCAGGGAGACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FIPEIPLEILVS*NFKGLRQGDRN Trigger: GTTTCTGTCTCCCTGACGGAGCCCTTTGAAGTTTCAACTCACCAGAATTTCCAGTGGTATCTCTGGGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAGAGGCCAGTACTCTATCCTATTGAATGTCAACCCTaGGAACAAGAGGCTAATATGGTGGCAAGGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KRPVLYPIECQP*EQEANMVARAG Trigger: ACCTGCCCTTGCCACCATATTAGCCTCTTGTTCTCAGGGTTGACATTCAATAGGATAGAGTACTGGCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TCAGCAGCCAGTCACAATTCAGATTTCCCTGACCACTaGAAATTGATTAATTGGCTTCTCATCCTCCCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SAASHNSDFPDH*KLINWLLILPP Trigger: GGGCGGGAGGATGAGAAGCCAATTAATCAATTTTCAGTGGTCAGGGAAATCTGAATTGTGACTGGCTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | ACTTACAGTGAAACCTCTTCACTCCCCTCCCTACAGTaGTTGCATCTGCAAGACAAACTGATTCTCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TYSETSSLPSLQ*LHLQDKLILQP Trigger: AGGCTGGAGAATCAGTTTGTCTTGCAGATGCAATCACTGTAGGGAGGGGAGTGAAGAGGTTTCACTGTAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CCCACTCTGGGTCACCAGTTCTGGTCTCACACCTTCTaGTGCTTTTTCATAGTGCAGAAGAGTCAAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PTLGHQFWSHTF*CFFIVQKSQTF Trigger: GAAAGTTTGACTCTTCTGCACTATGAAAAAGCATCAGAAGGTGTGAGACCAGAACTGGTGACCCAGAGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TCACTCCCAGAAGGCTCAAGTCCTCCTATCTTAGACTaGTGCCCATTCTATAAACACCTTAACCACCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: SLPEGSSPPILD*CPFYKHLNHLS Trigger: GGATAGGTGGTTAAGGTGTTTATAGAATGGGCAGCAGTCTAAGATAGGAGGACTTGAGCCTTCTGGGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CAAACCATCAACTTTTTCCACAGCCCCCAGGCTGTTTaGATTGTTCGCTTTGTGTCTTGTGCTACCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QTINFFHSPQAV*IVRFVSCATSD Trigger: ATCACTGGTAGCACAAGACACAAAGCGAACAATGCAAACAGCCTGGGGGCTGTGGAAAAAGTTGATGGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AACCTTGTACAATGCAAGCAAATCCTAGTTATCTTCTaGGTCGCTGCCTTGACGGTCCTGGGAAACGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLVQCKQILVIF*VAALTVLGNVK Trigger: TTTCACGTTTCCCAGGACCGTCAAGGCAGCGACGCAGAAGATAACTAGGATTTGCTTGCATTGTACAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CCAGAGCACACTTCCACATTCTCACACACAACCAAATaGATTGGTATGGCTAAATCTCCTCCTGTCTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PEHTSTFSHTTK*IGMAKSPPVSF Trigger: GAACGAGACAGGAGGAGATTTAGCCATACCAATGCATTTGGTTGTGTGTGAGAATGTGGAAGTGTGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CTTTTCCGGGACTACTCATCATTCACACCAATGCAGTaGAGAAAATTCCAACGGAAGCACCAAAGCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFRDYSSFTPMQ*RKFQRKHQSCP Trigger: AGGACAGCTTTGGTGCTTCCGTTGGAATTTTCTGCACTGCATTGGTGTGAATGATGAGTAGTCCCGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ATGCCCTTTTCCGGGACTACTCATCATTCACACCAATaGAGTGCAGAAAATTCCAACGGAAGCACCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MPFSGTTHHSHQ*SAENSNGSTKA Trigger: AGCTTTGGTGCTTCCGTTGGAATTTTCTGCACTGCATTGGTGTGAATGATGAGTAGTCCCGGAAAAGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TTTTGCCACAGAAATACAACGTTTCCGGCTAGGGCATaGCCTTTTCCGGGACTACTCATCATTCACACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: FCHRNTTFPARA*PFPGLLIIHTN Trigger: ATTGGTGTGAATGATGAGTAGTCCCGGAAAAGGGCATGCCCTAGCCGGAAACGTTGTATTTCTGTGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GACAAGCATTTAAACACAGGGAGAGAAGGACTCTCTTaGGGCTGGAGAGATGGCTCAGCATTTAAAAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: DKHLNTGREGLS*GWRDGSAFKST Trigger: AGTGCTTTTAAATGCTGAGCCATCTCTCCAGCCCCAAGAGAGTCCTTCTCTCCCTGTGTTTAAATGCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTAGAAAGTAGGTCAGTTCACTTCACCACACAGCTGTaGACACAGACAGAGGAAACACTAGAACTGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LESRSVHFTTQL*TQTEETLELFG Trigger: GCCAAACAGTTCTAGTGTTTCCTCTGTCTGTGTCCACAGCTGTGTGGTGAAGTGAACTGACCTACTTTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GGGACTGGGATTTTTGTTTTGCTTCGTTTCCACTGGTaGGCCATCAGCTATGTTACAATGACAGGCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GTGIFVLLRFHW*AISYVTMTGRF Trigger: AAACCTGCCTGTCATTGTAACATAGCTGATGGCCCACCAGTGGAAACGAAGCAAAACAAAAATCCCAGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ACTCGACAAAAGACATTAGATGAAGACTTGTCACGGTaGCTCCAGAGAGAGAAAAGTTTGCTCCCACTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TRQKTLDEDLSR*LQREKSLLPLL Trigger: GAGGAGTGGGAGCAAACTTTTCTCTCTCTGGAGCCACCGTGACAAGTCTTCATCTAATGTCTTTTGTCGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ACTCTAGTCTCTTCTCCAAGAAAGATGAAGGTAAACTaGGATTTCCTGAGACACCAGTGGGTGCTGCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TLVSSPRKMKVN*DFLRHQWVLQL Trigger: AAGCTGCAGCACCCACTGGTGTCTCAGGAAATCCCAGTTTACCTTCATCTTTCTTGGAGAAGAGACTAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GCGATCTGGCAACTGGAGTTACTTATTTTATACAGGTaGTCCCCAACTTCCTGTGATTCTATGGCAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AIWQLELLILYR*SPTSCDSMAAL Trigger: CAAGGCTGCCATAGAATCACAGGAAGTTGGGGACCACCTGTATAAAATAAGTAACTCCAGTTGCCAGATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTGGTAACATTCCCAATTaGGGTGTCAGACTCATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: APLLELQSLTRSKDASSTGNIPN*GVRLIK Trigger: CTTTATGAGTCTGACACCCAAATTGGGAATGTTACC...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGGAGGAAAAGAAATTAGGTATCCTGACAGCAAAGAGCAGACCTGCCCTATCTACCCCACTTTATTaGGGATTTCTTTCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EEEEKKLGILTAKSRPALSTPLY*GFLSLS Trigger: GGAGAGAGAAAGAAATCCCAAATAAAGTGGGGTAGA...TAGGGCAGGTCTGCTCTTTGCTGTCAGGATACCTAATTTCTTTTCCTCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAAGATGCAAGCAGCACTATACTGACAACCCAGTGCTaGGAATCCTCCCTGTCTTCAAGTTCCATGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KDASSTILTTQC*ESSLSSSSMWN Trigger: ATTCCACATGGAACTTGAAGACAGGGAGGATTCTCAGCACTGGGTTGTCAGTATAGTGCTGCTTGCATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR TCA 72 bp | CCATTTATGAACTGCGACAGCCTCTCCTCCTTGCTCTaGTTGAGAACAAACCACTTAGGCCAGAACCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PFMNCDSLSSLL*LRTNHLGQNHL Trigger: TAAATGGTTCTGGCCTAAGTGGTTTGTTCTCAATCAGAGCAAGGAGGAGAGGCTGTCGCAGTTCATAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CCCAGCTTGAAAATTTCAGTTCATCTCCCTTCCTCCTaGACCCTTCTAGAAAGTAGGTCAGTTCACTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PSLKISVHLPSS*TLLESRSVHFT Trigger: GGTGAAGTGAACTGACCTACTTTCTAGAAGGGTTCAGGAGGAAGGGAGATGAACTGAAATTTTCAAGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CAGAGTAAGAGCCACAATCGTCTGCAGTATTTCAAATaGTTTCTACAGTCACCTGACCCTGGGAAGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSKSHNRLQYFK*FLQSPDPGKGK Trigger: CTTTCCCTTCCCAGGGTCAGGTGACTGTAGAAATCATTTGAAATACTGCAGACGATTGTGGCTCTTACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AACTGTAAAGTCAGAAACTCTGCAATTGGCAAGCCCTaGGGATCTGGGGCTTGGGACTGGGATTTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NCKVRNSAIGKP*GSGAWDWDFCF Trigger: AAAACAAAAATCCCAGTCCCAAGCCCCAGATCCTCAGGGCTTGCCAATTGCAGAGTTTCTGACTTTACAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CGTCCATTCATTCCAGCTGACCACGTCTCCCTACGCTaGCTGTCCCATTTAGAGAACTCAAATTGGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: RPFIPADHVSLR*LSHLENSNWKI Trigger: TATTTTCCAATTTGAGTTCTCTAAATGGGACAGTCAGCGTAGGGAGACGTGGTCAGCTGGAATGAATGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CAGATACACGATTCAAGTATTGTCACAGAGTTAAAGTaGGATAAGACACTGCAGGCGAGGGGGAAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QIHDSSIVTELK*DKTLQARGKEA Trigger: TGCTTCCTTCCCCCTCGCCTGCAGTGTCTTATCTCACTTTAACTCTGTGACAATACTTGAATCGTGTATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTTGTGCCTCAGCCTAAGTGTTGGGATCACAGGTTATaGGCCATTGTGCCACATCATCTCAGTATTATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVPQPKCWDHRL*AIVPHHLSIMS Trigger: TGACATAATACTGAGATGATGTGGCACAATGGCTCATAACCTGTGATCCCAACACTTAGGCTGAGGCACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AGACATTTTGGAGGTCATTATGCTTGCCCAGGGTCATaGAGGGTCACTCATCTGGAAAGTAGTGTCCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: RHFGGHYACPGS*RVTHLESSVLI Trigger: TATGAGGACACTACTTTCCAGATGAGTGACCCTTCATGACCCTGGGCAAGCATAATGACCTCCAAAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTGTCTTTTCTAGAAGAGCATACTCAAAACAGCACCTaGCTTCCTCTGTCATCTGTGTTCAGTGTCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSFLEEHTQNST*LPLSSVFSVLL Trigger: CAGCAGGACACTGAACACAGATGACAGAGGAAGTCAGGTGCTGTTTTGAGTATGCTCTTCTAGAAAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTGATTGCATCTGCAAGACAAACTGATTCTCCAGCCTaGCCTCAGAGCCTTAACTCAAGAGACACAACTACA | + |
|
Preference number: 3 (lower is better) Translates to: VIASARQTDSPA*PQSLNSRDTTT Trigger: TGTAGTTGTGTCTCTTGAGTTAAGGCTCTGAGGTCAGGCTGGAGAATCAGTTTGTCTTGCAGATGCAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TCACAGGAGTATATCCAAGTGCGAGAAAACATCTTCTaGCTCATGATGGCCAAAGATCACAGATGCCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: SQEYIQVRENIF*LMMAKDHRCPM Trigger: CATTGGGCATCTGTGATCTTTGGCCATCATGAGGCAGAAGATGTTTTCTCGCACTTGGATATACTCCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CGAGAAAGAATTCCTGAACACGAGTGTAGAACTACCTaGTGGAGAATGTCCAACTTACCCAGCAGACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: RERIPEHECRTT*WRMSNLPSRHQ Trigger: TTGATGTCTGCTGGGTAAGTTGGACATTCTCCAGCAGGTAGTTCTACACTCGTGTTCAGGAATTCTTTCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AACCTTCCAGTGACACTCAGTTATCTTTGCCCCTCCTaGCCAGCACATAACCCATCACTTTGCACATTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: NLPVTLSYLCPS*PAHNPSLCTFN Trigger: ATTAAATGTGCAAAGTGATGGGTTATGTGCTGGGCAGGAGGGGCAAAGATAACTGAGTGTCACTGGAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TTGCCTAACAGGACCAGAAAAGGACACTGGATCCCTTaGAACTTAGATACAGTAATTTCTGGGCTGCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LPNRTRKGHWIP*NLDTVISGLPC Trigger: ACATGGCAGCCCAGAAATTACTGTATCTAAGTTCCAAGGGATCCAGTGTCCTTTTCTGGTCCTGTTAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GCCTGCACGGTTAAAATGAGGCATGGATATAAACGATaGTTTAGCTGGAAGGAAAGGCTAGACTGCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ACTVKMRHGYKR*FSWKERLDCLT Trigger: TGTCAAGCAGTCTAGCCTTTCCTTCCAGCTAAACCATCGTTTATATCCATGCCTCATTTTAACCGTGCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GTGGGCCATCAGCTATGTTACAATGACAGGCAGGTTTaGTTATCCACTATACTTAACAAATTGCCTGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: VGHQLCYNDRQV*LSTILNKLPAR Trigger: CCGTGCAGGCAATTTGTTAAGTATAGTGGATAACCAAACCTGCCTGTCATTGTAACATAGCTGATGGCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCTGCTGAGTACGATGTCAGACAGCCCTCAGCATCATaGCAGCCTCTTGATGAAGGGAAATATTTTCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SAEYDVRQPSAS*QPLDEGKYFHL Trigger: TAGATGAAAATATTTCCCTTCATCAAGAGGCTGCCATGATGCTGAGGGCTGTCTGACATCGTACTCAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GAAAGAATTCCTGAACACGAGTGTAGAACTACCTGCTaGAGAATGTCCAACTTACCCAGCAGACATCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ERIPEHECRTTC*RMSNLPSRHQL Trigger: CAGTTGATGTCTGCTGGGTAAGTTGGACATTCTCCAGCAGGTAGTTCTACACTCGTGTTCAGGAATTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTTTGTGGCCTAGACAACAACAAACAGGACTATTTGTaGAGCTATGAGCTGACAATGACACAGAGTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCGLDNNKQDYL*SYELTMTQSGH Trigger: ATGCCCACTCTGTGTCATTGTCAGCTCATAGCTCCACAAATAGTCCTGTTTGTTGTTGTCTAGGCCACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ACTGTTAGGAATGTCTTGCCATGCTGGTCACTGTTGTaGCTCATAGACATCACAGCTGGTTATGACACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TVRNVLPCWSLL*LIDITAGYDTD Trigger: ATCAGTGTCATAACCAGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTAACATTCGGTTTTCTTaGCAATTGCGTGCTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: APLLELQSLTRSKDASSTNIRFS*QLRALE Trigger: TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTT...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTGAAACTTTCCAGCCATaGAAAACTCTAATCGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSETFQP*KTLIDS Trigger: TGAATCGATTAGAGTTTTCAATGGCTGGAAAGTTTC...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTAAAGCACACAGTGATTaGCATCATTTGAAACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSKAHSD*HHLKHP Trigger: AGGATGTTTCAAATGATGCAAATCACTGTGTGCTTT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTaGCAACCCAGTGCTGAGAATCCTCCCTGTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLQEVKMQAALY*QPSAENPPCLQ Trigger: TTGAAGACAGGGAGGATTCTCAGCACTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR TCA 72 bp | TCGTCTGCAGTATTTCAAATGATTTCTACAGTCACCTaGCCCTGGGAAGGGAAAGCAGGCTTTAAGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: SSAVFQMISTVT*PWEGKAGFKRL Trigger: AAGTCTCTTAAAGCCTGCTTTCCCTTCCCAGGGTCAGGTGACTGTAGAAATCATTTGAAATACTGCAGACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TGTTTGCATTGTTCGCTTTGTGTCTTGTGCTACCAGTaGTGGACAATGTCAAAACATTCAGAGCGGTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CLHCSLCVLCYQ*WTMSKHSERLS Trigger: GGACAACCGCTCTGAATGTTTTGACATTGTCCATCACTGGTAGCACAAGACACAAAGCGAACAATGCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GGTGGTCCCCAACTTCCTGTGATTCTATGGCAGCCTTaGCTATGTTGCAAAATGATTTATGCTCAGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGPQLPVILWQP*LCCKMIYAQQK Trigger: TTTCTGCTGAGCATAAATCATTTTGCAACATAGTCAAGGCTGCCATAGAATCACAGGAAGTTGGGGACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGCAACCACAAGCACTATCATTTCACTTTAGTAACCTaGCCCAAGCACACACTGTTCGTACAGTCATGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNHKHYHFTLVT*PKHTLFVQSCR Trigger: TCTACATGACTGTACGAACAGTGTGTGCTTGGGGCAGGTTACTAAAGTGAAATGATAGTGCTTGTGGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AACTCAGGGAAAATCCACAAGCTTTTGATCACTAACTaGCATCCAGTCCCTAGTTTGGCACACAGTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: NSGKIHKLLITN*HPVPSLAHSRF Trigger: AAACCTACTGTGTGCCAAACTAGGGACTGGATGGCAGTTAGTGATCAAAAGCTTGTGGATTTTCCCTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GGCATGGTAGAAAAGGACAGAATATGCCTGGTAATTTaGTGCAGACGAACTAGACCACTAATGCTTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GMVEKDRICLVI*CRRTRPLMLSL Trigger: CAAGGAAAGCATTAGTGGTCTAGTTCGTCTGCAGCAAATTACCAGGCATATTCTGTCCTTTTCTACCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GTTTCTATATGTTTCTCCTGCAGACTCTCTGCATTCTaGAAGAATCAGCTCACCCCAGCAGCTATGGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSICFSCRLSAF*KNQLTPAAMVF Trigger: AAAAACCATAGCTGCTGGGGTGAGCTGATTCTTGCAGAATGCAGAGAGTCTGCAGGAGAAACATATAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TCTGTCATAACATCTCTCGATGTCCTTCCCAGCTCCTaGCCACAATCAAATTTCACTTCACTATTCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVITSLDVLPSS*PQSNFTSLFSS Trigger: GGAACTGAATAGTGAAGTGAAATTTGATTGTGGGCAGGAGCTGGGAAGGACATCGAGAGATGTTATGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GTCAAACTTTCAAAACACAAATCCTACAGCACTCTCTaGAAGCCCTTTCCACATACCAGTAGACACACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VKLSKHKSYSTL*KPFPHTSRHTH Trigger: GTGAGTGTGTCTACTGGTATGTGGAAAGGGCTTGCAGAGAGTGCTGTAGGATTTGTGTTTTGAAAGTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GACTACAGTGTTAAACCAGACAGGCATTTTGCCTCTTaGATTCGCCACCAAATAAATGCCGATCTTTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DYSVKPDRHFAS*IRHQINADLLL Trigger: CAGCAAAAGATCGGCATTTATTTGGTGGCGAATCCAAGAGGCAAAATGCCTGTCTGGTTTAACACTGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AGTCTCACAGGTGGGAAAAGGGAAGACCTAATTCATTaGATCTGTCTCTTGTCCTCACCTAAATATGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLTGGKREDLIH*ICLLSSPKYVG Trigger: GCCAACATATTTAGGTGAGGACAAGAGACAGATCCAATGAATTAGGTCTTCCCTTTTCCCACCTGTGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AGGCAAATCAATGCCAGAGCCTCCTCCCACTGTCTATaGGGTCATATTTATATTCTTCCTAAACACCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RQINARASSHCL*GHIYILPKHQA Trigger: TGCTTGGTGTTTAGGAAGAATATAAATATGACCCCATAGACAGTGGGAGGAGGCTCTGGCATTGATTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CGATGGCAAGCCACTGGAATATCACGAGAAATTGTCTaGCAAGTTACTCTCTATGAAGTCACAAAGTCACGA | + |
|
Preference number: 3 (lower is better) Translates to: RWQATGISREIV*QVTLYEVTKSR Trigger: TCGTGACTTTGTGACTTCATAGAGAGTAACTTGCCAGACAATTTCTCGTGATATTCCAGTGGCTTGCCATCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCAGCTTTACAGTTTGATGTGGTACTCGGATTCCGCTaGGCAACTGAGATGGAAATGGACACTCTACTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SALQFDVVLGFR*ATEMEMDTLLF Trigger: AAAAAGTAGAGTGTCCATTTCCATCTCAGTTGCCCAGCGGAATCCGAGTACCACATCAAACTGTAAAGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ACTGTGACTCGTTATCATCAAATGTTTATTTTTGTCTaGAGGCGGGAGGTCAAGGGACTGGATAACATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVTRYHQMFIFV*RREVKGLDNIL Trigger: CAGGATGTTATCCAGTCCCTTGACCTCCCGCCTCCAGACAAAAATAAACATTTGATGATAACGAGTCACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTTCCACATTCTCACACACAACCAAATGCATTGGTATaGCTAAATCTCCTCCTGTCTCGTTCCGTTCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPHSHTQPNALV*LNLLLSRSVHN Trigger: ATTGTGAACGGAACGAGACAGGAGGAGATTTAGCCATACCAATGCATTTGGTTGTGTGTGAGAATGTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TGTTATTATTGCACTGTTAGGAATGTCTTGCCATGCTaGTCACTGTTGTGGCTCATAGACATCACAGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CYYCTVRNVLPC*SLLWLIDITAG Trigger: ACCAGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGTGCAATAATAACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAACAAATGATCATCTCATaGCCCAGCTTGAAAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SQRPNQDCLSSLMSVSLEQMIIS*PSLKIS Trigger: TGAAATTTTCAAGCTGGGCAATGAGATGATCATTTG...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TTTAGTGGTGGTCTACAACCCTTTGACACTGAAATATaGCATCTGTGGTATGCAAATGTGTTGGGCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: FSGGLQPFDTEI*HLWYANVLGYT Trigger: GGTGTAGCCCAACACATTTGCATACCACAGATGTCATATTTCAGTGTCAAAGGGTTGTAGACCACCACTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAGTTACTCTCTATGAAGTCACAAAGTCACGACAAGTaGAGATCAGCAACATGGTGCCAGGTGAAGCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: KLLSMKSQSHDK*RSATWCQVKQY Trigger: GTATTGCTTCACCTGGCACCATGTTGCTGATCTTCACTTGTCGTGACTTTGTGACTTCATAGAGAGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CAGATTCAGTTCCATGGGATCGTGAGTGCTGCAGTCTaGATGTATACTGAAAACCCATTTGCTGTAAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: QIQFHGIVSAAV*MYTENPFAVNQ Trigger: TTGGTTTACAGCAAATGGGTTTTCAGTATACATTCAGACTGCAGCACTCACGATCCCATGGAACTGAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GAGGCAGCACAAGGTTTTACAGCAGACATCTGTATTTaGCTTCCAACACCCAACTCAACAGCTAAACAACTA | + |
|
Preference number: 3 (lower is better) Translates to: EAAQGFTADICI*LPTPNSTAKQL Trigger: TAGTTGTTTAGCTGTTGAGTTGGGTGTTGGAAGTCAAATACAGATGTCTGCTGTAAAACCTTGTGCTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TGTCTGCAGCCATTAAACAGCAGAACTTTCCCCCACTaGCTCTATCTTGTCCTCTCATTCTATGCTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLQPLNSRTFPH*LYLVLSFYAHF Trigger: AAAATGAGCATAGAATGAGAGGACAAGATAGAGTCAGTGGGGGAAAGTTCTGCTGTTTAATGGCTGCAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AAACTCCCAGTTTGCAGAGTAAGAGCCACAATCGTCTaGAGTATTTCAAATGATTTCTACAGTCACCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: KLPVCRVRATIV*SISNDFYSHLT Trigger: GGTCAGGTGACTGTAGAAATCATTTGAAATACTGCAGACGATTGTGGCTCTTACTCTGCAAACTGGGAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TCTTCCTGCATACTAAGCAAACACTACCAGCTAAACTaGACTCTCAGCCCAAGACTATGTTGCTCTAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: SSCILSKHYQLN*TLSPRLCCSRI Trigger: TATTCTAGAGCAACATAGTCTTGGGCTGAGAGTGCAGTTTAGCTGGTAGTGTTTGCTTAGTATGCAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TATAAACGATGGTTTAGCTGGAAGGAAAGGCTAGACTaGTTGACATTCAGTTTGGAAAGGATACGGACATGG | + |
|
Preference number: 3 (lower is better) Translates to: YKRWFSWKERLD*LTFSLERIRTW Trigger: CCATGTCCGTATCCTTTCCAAACTGAATGTCAAGCAGTCTAGCCTTTCCTTCCAGCTAAACCATCGTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGAGAATCAGAAGGCATGGTAGAAAAGGACAGAATATaGCTGGTAATTTGCTGCAGACGAACTAGACCACTA | + |
|
Preference number: 3 (lower is better) Translates to: RESEGMVEKDRI*LVICCRRTRPL Trigger: TAGTGGTCTAGTTCGTCTGCAGCAAATTACCAGGCATATTCTGTCCTTTTCTACCATGCCTTCTGATTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGCCTGTCATTTCCAGCTCTAGGAAGTAACAATCTTTaGAAAGAAGTGGAGTGTAGGCAGCTATTTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLSFPALGSNNL*KEVECRQLFSV Trigger: CACTGAAAATAGCTGCCTACACTCCACTTCTTTGCAAAGATTGTTACTTCCTAGAGCTGGAAATGACAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ATTATTGCCTCTGAAATAGCCTTGCTCCCCCAGCTTTaGATAACAATATCCAGATTGCTATTATGCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IIASEIALLPQL*ITISRLLLCPF Trigger: GAAGGGGCATAATAGCAATCTGGATATTGTTATGCAAAGCTGGGGGAGCAAGGCTATTTCAGAGGCAATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGCCTAAGTGTTGGGATCACAGGTTATGAGCCATTGTaGCACATCATCTCAGTATTATGTCATTACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSVGITGYEPL*HIISVLCHYRR Trigger: TCTCCTGTAATGACATAATACTGAGATGATGTGGCACAATGGCTCATAACCTGTGATCCCAACACTTAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AAGAAGCCAATGATAGGTGTTTCTATATGTTTCTCCTaGAGACTCTCTGCATTCTGCAAGAATCAGCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: KKPMIGVSICFS*RLSAFCKNQLT Trigger: GGTGAGCTGATTCTTGCAGAATGCAGAGAGTCTGCAGGAGAAACATATAGAAACACCTATCATTGGCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TTGATGAGGTGCTTGCTTGAAATACCGTGTGCACGCTaGCGCGTCTCCCTTTCTAGATTCATTAATTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LMRCLLEIPCAR*RVSLSRFINFK Trigger: TTTAAAATTAATGAATCTAGAAAGGGAGACGCGGCAGCGTGCACACGGTATTTCAAGCAAGCACCTCATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GAATGTTATTATTGCACTGTTAGGAATGTCTTGCCATaGTGGTCACTGTTGTGGCTCATAGACATCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ECYYCTVRNVLP*WSLLWLIDITA Trigger: AGCTGTGATGTCTATGAGCCACAACAGTGACCAGCATGGCAAGACATTCCTAACAGTGCAATAATAACATTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TGGATCTTGTACTTTAGGAGCACGAAGCACAAGATGTaGGCAGATACACGATTCAAGTATTGTCACAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: WILYFRSTKHKM*ADTRFKYCHRV Trigger: AACTCTGTGACAATACTTGAATCGTGTATCTGCCCACATCTTGTGCTTCGTGCTCCTAAAGTACAAGATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GGCATTAACTGCCACATCCATGTATCCCAGCAAACATaGGTTAGACACCTGATAATCTACACTGACTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: GINCHIHVSQQT*VRHLIIYTDCI Trigger: AATACAGTCAGTGTAGATTATCAGGTGTCTAACCCATGTTTGCTGGGATACATGGATGTGGCAGTTAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TTTCTAGGTGACAATCACAGCAAACATCCTAGTTTATaGTACTGTTCCCTGAGCCTTAGGTACAGGAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLGDNHSKHPSL*YCSLSLRYRSC Trigger: ACAACTCCTGTACCTAAGGCTCAGGGAACAGTACCATAAACTAGGATGTTTGCTGTGATTGTCACCTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GAGTACTTTTCAGTATGGGTTCTGACCTTACATGACTaGGTTAAGTTACCATTCTGGGTTCTTTCCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EYFSVWVLTLHD*VKLPFWVLSIP Trigger: TGGGATGGAAAGAACCCAGAATGGTAACTTAACTCAGTCATGTAAGGTCAGAACCCATACTGAAAAGTACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTACATATTTTGACCTCGAAGCCTTCCCAACCCACTTaGGATTTACTATTTAGGAAATCTATCTCCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VHILTSKPSQPT*DLLFRKSISTA Trigger: GGCAGTGGAGATAGATTTCCTAAATAGTAAATCTCAAGTGGGTTGGGAAGGCTTCGAGGTCAAAATATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TCATGTGCTGGTTTCCCTAAGTCTGTAATGTTCTACTaGATGAAGTCAGTTGTCCAGAAGTACAGCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SCAGFPKSVMFY*MKSVVQKYSHQ Trigger: TTGATGGCTGTACTTCTGGACAACTGACTTCATTCAGTAGAACATTACAGACTTAGGGAAACCAGCACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | ACAAATCAAAGCAGTGCGGCATATCACCAGTATAATTaGCTTAGTGATGGACACAGACAGTCAAAGACACAC | + |
|
Preference number: 3 (lower is better) Translates to: TNQSSAAYHQYN*LSDGHRQSKTH Trigger: GTGTGTCTTTGACTGTCTGTGTCCATCACTAAGTCAATTATACTGGTGATATGCCGCACTGCTTTGATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTCCTTGAAGGTAGATGTGAGCTTTCAATCTATTATTaGAGAATAGCAGACTCTCTCTTAGCGGGGAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: VLEGRCELSIYY*RIADSLLAGNP Trigger: AGGATTCCCCGCTAAGAGAGAGTCTGCTATTCTTCAATAATAGATTGAAAGCTCACATCTACCTTCAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CCTAGACAACAACAAACAGGACTATTTGTGGAGCTATaGGCTGACAATGACACAGAGTGGGCATATCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PRQQQTGLFVEL*ADNDTEWAYHL Trigger: TAAATGATATGCCCACTCTGTGTCATTGTCAGCTCATAGCTCCACAAATAGTCCTGTTTGTTGTTGTCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAACAACTAGAGACAGTTTCCATGACTTCTCAGAGATaGACATCCTTCCCCTGTACTGAAAAGAACAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KQLETVSMTSQR*TSFPCTEKNSV Trigger: CACACTGTTCTTTTCAGTACAGGGGAAGGATGTTCATCTCTGAGAAGTCATGGAAACTGTCTCTAGTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CACAGCAGCCAGATAGAAGGTAGCAACATTCCAACCTaGCTTTGGACATCTAAAACCTTTAAAGAAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSSQIEGSNIPT*LWTSKTFKENL Trigger: AAGGTTTTCTTTAAAGGTTTTAGATGTCCAAAGGCAGGTTGGAATGTTGCTACCTTCTATCTGGCTGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AAACAGAAACCAGACCTTGTGGGTAAAAGAGATAGCTaGATCATTAAAGTGTGTGCCTTGCTATCACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KQKPDLVGKRDS*IIKVCALLSQG Trigger: TCCTTGTGATAGCAAGGCACACACTTTAATGATGCAGCTATCTCTTTTACCCACAAGGTCTGGTTTCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | GACTGTCCCTGGGAACAAGGCATTACTAACCTTTCCTaGATAGCAAATTTAAATTTGAATCATTGGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DCPWEQGITNLS*IANLNLNHWAA Trigger: AGCAGCCCAATGATTCAAATTTAAATTTGCTATGCAGGAAAGGTTAGTAATGCCTTGTTCCCAGGGACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ATGGTAGAAAAGGACAGAATATGCCTGGTAATTTGCTaGAGACGAACTAGACCACTAATGCTTTCCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MVEKDRICLVIC*RRTRPLMLSLS Trigger: AGACAAGGAAAGCATTAGTGGTCTAGTTCGTCTGCAGCAAATTACCAGGCATATTCTGTCCTTTTCTACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AAGCTACTCTGCCCTAGTTTGGAGACTTTTAGATTGTaGTTTCCTCTAGAATCTCTGACACAGATGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KLLCPSLETFRL*FPLESLTQMTD Trigger: ATCTGTCATCTGTGTCAGAGATTCTAGAGGAAAGCACAATCTAAAAGTCTCCAAACTAGGGCAGAGTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ATCATTGGGCTGCTTAGGATTTCTGCCATTTCCCAGTaGAATAAGATTAGAGATGAACTTTCAGGTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: IIGLLRISAISQ*NKIRDELSGSS Trigger: GGATGAACCTGAAAGTTCATCTCTAATCTTATTCCACTGGGAAATGGCAGAAATCCTAAGCAGCCCAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | CTACTCTTTGGTAAGGTCAAGTCATTGTCTCAAGGATaGGGAAAGCATTCATTCTATAACAGAAACAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFGKVKSLSQG*GKHSFYNRNRG Trigger: CCCTCTGTTTCTGTTATAGAATGAATGCTTTCCCCATCCTTGAGACAATGACTTGACCTTACCAAAGAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AAACGAGGGTTGTGGACCTCTTTAGAAATAGTTCTTTaGGTCAATTCCAATCTTTGTTGTCAGCAGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KRGLWTSLEIVL*VNSNLCCQQSS Trigger: ACTGGACTGCTGACAACAAAGATTGGAATTGACCCAAAGAACTATTTCTAAAGAGGTCCACAACCCTCGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCAACATTCGGTTTTCTTaGCAATTGCGTGCTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ENSNRFSKMEASISKALSNIRFS*QLRALE Trigger: TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTT...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCACTCAGTTTAAGCCTTaGATAGTCAAAATCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ENSNRFSKMEASISKALSTQFKP*IVKIRS Trigger: GCTCCTGATTTTGACTATCAAAGGCTTAAACTGAGT...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCTGCTTGACATTCAGTTaGGAAAGGATACGGACATGG | + |
|
Preference number: 3 (lower is better) Translates to: FHSFPMLSSHVTITDTISCLTFS*ERIRTW Trigger: CCATGTCCGTATCCTTTCCAAACTGAATGTCAAGCA...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGAGGTTCCAAACTGTTTTCCCATTTCTAAAGCTATAATCATAAAGGGTGATGTTGAAGTTATCTaGTACCATGTGAGCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CHEVPNCFPISKAIIIKGDVEVI*YHVSRL Trigger: CAGCCTGCTCACATGGTACAAGATAACTTCAACATC...ACCCTTTATGATTATAGCTTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AGGGAAGTTTGTCTTCCAAGAAATGAATTGGATCTCTaGAGACAAGTATTACTTCAGAGTCCGTGTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: REVCLPRNELDL*RQVLLQSPCPK Trigger: TTTGGGACACGGACTCTGAAGTAATACTTGTCTTCAGAGATCCAATTCATTTCTTGGAAGACAAACTTCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | ATAGAATATTTAACTCAGGGAAAATCCACAAGCTTTTaGTCACTAACTGCCATCCAGTCCCTAGTTTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IEYLTQGKSTSF*SLTAIQSLVWH Trigger: GTGCCAAACTAGGGACTGGATGGCAGTTAGTGATCAAAAGCTTGTGGATTTTCCCTGAGTTAAATATTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TCCACTATACTTAACAAATTGCCTGCACGGTTAAAATaGGGCATGGATATAAACGATGGTTTAGCTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: STILNKLPARLK*GMDINDGLAGR Trigger: CCTTCCAGCTAAACCATCGTTTATATCCATGCCTCATTTTAACCGTGCAGGCAATTTGTTAAGTATAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTTCTGCCTTTGCGCATAATTTATTATCATTTCACATaGGAAGATAAAGCTCAGAGCACACATTCACGACGC | + |
|
Preference number: 3 (lower is better) Translates to: VLPLRIIYYHFT*EDKAQSTHSRR Trigger: GCGTCGTGAATGTGTGCTCTGAGCTTTATCTTCTCATGTGAAATGATAATAAATTATGCGCAAAGGCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | ATGACTTCACAATGTCAAGACCTTGAGAGGGGATTATaGGGAATGGGGGTTAGAATTCAAATAGTCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: MTSQCQDLERGL*GMGVRIQIVTQ Trigger: TTGAGTGACTATTTGAATTCTAACCCCCATTCCTCATAATCCCCTCTCAAGGTCTTGACATTGTGAAGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTGAGAGGTCTTGTAAATTCACAGAAATTAGCAAACTaGCAGTCCTTCATCCCAGAGATACCACTGGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LRGLVNSQKLAN*QSFIPEIPLEI Trigger: AATTTCCAGTGGTATCTCTGGGATGAAGGACTGTCAGTTTGCTAATTTCTGTGAATTTACAAGACCTCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AGAACACAGCTCATTCAAGGAACAAATAACATAGTCTaGAAACAGGAATTTCAGCAAGTGGTTCCTTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: RTQLIQGTNNIV*KQEFQQVVPYS Trigger: GCTGTAAGGAACCACTTGCTGAAATTCCTGTTTGCAGACTATGTTATTTGTTCCTTGAATGAGCTGTGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCTGGACAGAGGGAAAAATCACGATTGTTCCAGGAATaGCCCATCCGCCAATTAAAAAGTGTTCTTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SGQREKSRLFQE*PIRQLKSVLIF Trigger: AAAAATAAGAACACTTTTTAATTGGCGGATGGGCCATTCCTGGAACAATCGTGATTTTTCCCTCTGTCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CCA 72 bp | CTAGTAAGCACTTTCCCGGTAGTATTTTCTAACCTTTaGCATTTAGACTTCTTCCTCCACTTTTCCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LVSTFPVVFSNL*HLDFFLHFSKM Trigger: CATCTTGGAAAAGTGGAGGAAGAAGTCTAAATGCCAAAGGTTAGAAAATACTACCGGGAAAGTGCTTACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCCAAAGAAAACATAAACTACGTAGTTCTATATAGCCAGAAATGCCAAATCAACATTCGGTTTTCTTaGCAATTGCGTGCTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: APKENINYVVLYSQKCQINIRFS*QLRALE Trigger: TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTT...GATTTGGCATTTCTGGCTATATAGAACTACGTAGTTTATGTTTTCTTTGGGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTATTCTCCTAGCTTGGTaGAAGACTAGGTTCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTILLAW*KTRFNP Trigger: GGGATTGAACCTAGTCTTCAACCAAGCTAGGAGAAT...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CAGTTTACGGTTCCCAATGATGTCATCGTATCTAGGTaGTTAAGGACCTATTTGGTTTTCCAATCACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QFTVPNDVIVSR*LRTYLVFQSHK Trigger: TTTGTGTGATTGGAAAACCAAATAGGTCCTTAATCACCTAGATACGATGACATCATTGGGAACCGTAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CTGAACTTGACAAAGCACACAGTGATTTGCATCATTTaGAACATCCTATTTCGGAGCTCTTCTTCCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNLTKHTVICII*NILFRSSSSFF Trigger: AAAGAAGGAAGAAGAGCTCCGAAATAGGATGTTTCAAATGATGCAAATCACTGTGTGCTTTGTCAAGTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AGTTTGCCAGCATTCTGGATTGCTCTGGTATATATGTaGGCTTTAACTAAAACCTGTCTGGAAATACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLPAFWIALVYM*ALTKTCLEIQY Trigger: GTACTGTATTTCCAGACAGGTTTTAGTTAAAGCTCACATATATACCAGAGCAATCCAGAATGCTGGCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AATATCACGAGAAATTGTCTGGCAAGTTACTCTCTATaGAGTCACAAAGTCACGACAAGTGAAGATCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NITRNCLASYSL*SHKVTTSEDQQ Trigger: TTGCTGATCTTCACTTGTCGTGACTTTGTGACTTCATAGAGAGTAACTTGCCAGACAATTTCTCGTGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AAGTCTCCATTCAGAGCTTGCTCACTAGATCCACTGTaGCTCGTTATCATCAAATGTTTATTTTTGTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KSPFRACSLDPL*LVIIKCLFLSG Trigger: TCCAGACAAAAATAAACATTTGATGATAACGAGTCACAGTGGATCTAGTGAGCAAGCTCTGAATGGAGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TTTTTCTACACTTGGATGACTCAAAAGCAATTTGCATaGGCATGTCTTAATGGAGCACATAGCTTCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FFYTWMTQKQFA*ACLNGAHSFSF Trigger: GAAGGAGAAGCTATGTGCTCCATTAAGACATGCTCATGCAAATTGCTTTTGAGTCATCCAAGTGTAGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TACCAGCTAAACTGCACTCTCAGCCCAAGACTATGTTaGTCTAGAATAACAATTTCAATGTTCTTTCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: YQLNCTLSPRLC*SRITISMFFHG Trigger: TCCATGAAAGAACATTGAAATTGTTATTCTAGAGCAACATAGTCTTGGGCTGAGAGTGCAGTTTAGCTGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TCACTGTTGGAAAAACTGGTGAGAGTTAATCAAACCTaGAGTTTAACCGTTAGATTTAGCCTCAGTCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLLEKLVRVNQT*SLTVRFSLSHL Trigger: TAAGTGACTGAGGCTAAATCTAACGGTTAAACTGCAGGTTTGATTAACTCTCACCAGTTTTTCCAACAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TCTCTGTTGTTCGAGTTTCAAAATGAAGCTGATACTTaGAAGAGAACGTTCATCTATTGGACAGTTTACGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLFEFQNEADT*KRTFIYWTVYG Trigger: ACCGTAAACTGTCCAATAGATGAACGTTCTCTTCCAAGTATCAGCTTCATTTTGAAACTCGAACAACAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGAGGTTCCAAACTGTTTTCCCATTTCTAAAGCTATAATCATAAAGGGTAGCAGGGGCATGATTTaGCCAACTGTAAATATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CHEVPNCFPISKAIIIKGSRGMI*PTVNIF Trigger: GAAAATATTTACAGTTGGCAAAATCATGCCCCTGCT...ACCCTTTATGATTATAGCTTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TTTATTAGTTACAGGACGTTAGTTCTTCAACTGGGATaGACAAGGAATTGGTTATTCAAGAGGCTACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: FISYRTLVLQLG*TRNWLFKRLQP Trigger: TGGTTGTAGCCTCTTGAATAACCAATTCCTTGTTCATCCCAGTTGAAGAACTAACGTCCTGTAACTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTTCCTTCTCTTTGGGCTTTACTGCCTCAGTTACTGTaGAACAGAAAATCTACTGGTAAATATTTCGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VPSLWALLPQLL*NRKSTGKYFVV Trigger: AACAACGAAATATTTACCAGTAGATTTTCTGTTTCACAGTAACTGAGGCAGTAAAGCCCAAAGAGAAGGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AGGACAAATGTATCACCATTCCACCTTTCTCCTACATaGGACTACAGGAGCTTTTGTAAAATCTCAAATATG | + |
|
Preference number: 3 (lower is better) Translates to: RTNVSPFHLSPT*DYRSFCKISNM Trigger: CATATTTGAGATTTTACAAAAGCTCCTGTAGTCTCATGTAGGAGAAAGGTGGAATGGTGATACATTTGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | CACACTCACTCTCTATCTACATGTGCAAGCATACAGTaGTCTATCTACTATATACTCTGTCATAACATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTHSLSTCASIQ*SIYYILCHNIS Trigger: AGAGATGTTATGACAGAGTATATAGTAGATAGATCACTGTATGCTTGCACATGTAGATAGAGAGTGAGTGTG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TTCACTTATCAGTTTGTAGAGCACCATCTGGTACTATaGAAGCTAGTCTTCAGAGACAGGATTTTCAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: FTYQFVEHHLVL*KLVFRDRIFKL Trigger: TAACTTGAAAATCCTGTCTCTGAAGACTAGCTTTCATAGTACCAGATGGTGCTCTACAAACTGATAAGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | ATGTATGAAAAACGTCAATGCTCATCACATGATCTCTaGCATGAGGTTCCAAACTGTTTTCCCATTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: MYEKRQCSSHDL*HEVPNCFPISK Trigger: TTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCAGAGATCATGTGATGAGCATTGACGTTTTTCATACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | TCAATTATTTCACTAATGTGCACACACAGTTATGGCTaGTTCCTGGGGAGTGTGCAATTTAGACATTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SIISLMCTHSYG*FLGSVQFRHLK Trigger: TTTTAAATGTCTAAATTGCACACTCCCCAGGAAGCAGCCATAACTGTGTGTGCACATTAGTGAAATAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AATGGATCAAAAATATTCCATGTGGGTAGTAGACATTaGCTGCGCGTCACGATATGCAATTTATTTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NGSKIFHVGSRH*LRVTICNLFLG Trigger: TCCTAAAAATAAATTGCATATCGTGACGCGCAGGCAATGTCTACTACCCACATGGAATATTTTTGATCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | GTTTTCAAAGGGAAGTTTGTCTTCCAAGAAATGAATTaGATCTCTGAAGACAAGTATTACTTCAGAGTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: VFKGKFVFQEMN*ISEDKYYFRVR Trigger: ACGGACTCTGAAGTAATACTTGTCTTCAGAGATCCAATTCATTTCTTGGAAGACAAACTTCCCTTTGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTACTCAGTTTAAGCCTTaGATAGTCAAAATCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTTQFKP*IVKIRS Trigger: GCTCCTGATTTTGACTATCAAAGGCTTAAACTGAGT...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | TGGTGGCACCCATTTACTGTGATAGTAATCATCATCTaGTACTATAATTTAGCTCTACACATTCTTTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WWHPFTVIVIII*YYNLALHILLP Trigger: TGGCAAAAGAATGTGTAGAGCTAAATTATAGTATCAGATGATGATTACTATCACAGTAAATGGGTGCCACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | AACACTAGAACTGTTTGGCATACCCTGATATATAAATaGCAATTACTAAGATTTCTGCAAATCTCCCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: NTRTVWHTLIYK*QLLRFLQISPR Trigger: TCTAGGGGAGATTTGCAGAAATCTTAGTAATTGGCATTTATATATCAGGGTATGCCAAACAGTTCTAGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CACTATTCAGTTCCTTGGGAAATTAAATCTAAGTCATaGCTATTACACATACTCACAGTAACCTTCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HYSVPWEIKSKS*LLHILTVTFLL Trigger: AAGAAGGAAGGTTACTGTGAGTATGTGTAATAGGCATGACTTAGATTTAATTTCCCAAGGAACTGAATAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR GCA 72 bp | CTTGACCAGTTACTCTTTTCTGTGATAACCACAGTCTaGTGTAAAGAAGATTCTTTGAGAGCTATACTTATT | + |
|
Preference number: 3 (lower is better) Translates to: LDQLLFSVITTV*CKEDSLRAILI Trigger: AATAAGTATAGCTCTCAAAGAATCTTCTTTACAGCAGACTGTGGTTATCACAGAAAAGAGTAACTGGTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | AAAAATAAGTACAGAAGAGGCCCTGCATTTGAGGAGTaGTTGAACAGACAAGATTTGGAAATTCTCAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: KNKYRRGPAFEE*LNRQDLEILKI Trigger: AATTTTGAGAATTTCCAAATCTTGTCTGTTCAACCACTCCTCAAATGCAGGGCCTCTTCTGTACTTATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | ACCTGTGTGCACTTAATACTCTTCAAATCTCTTAAATaGGAAAGTGCTCCCATGTTAAGAATTTTATGGATC | + |
|
Preference number: 3 (lower is better) Translates to: TCVHLILFKSLK*ESAPMLRILWI Trigger: GATCCATAAAATTCTTAACATGGGAGCACTTTCCCATTTAAGAGATTTGAAGAGTATTAAGTGCACACAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | GTTTTGTTTTCAAAGGGAAGTTTGTCTTCCAAGAAATaGATTGGATCTCTGAAGACAAGTATTACTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLFSKGSLSSKK*IGSLKTSITSE Trigger: CTCTGAAGTAATACTTGTCTTCAGAGATCCAATTCATTTCTTGGAAGACAAACTTCCCTTTGAAAACAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AACAACAAACTAGTTCAGAGAAATCCCCAAGCCACATaGATGATAATTAAAACCAAGTATTCCTCAACATCA | + |
|
Preference number: 3 (lower is better) Translates to: NNKLVQRNPQAT*MIIKTKYSSTS Trigger: TGATGTTGAGGAATACTTGGTTTTAATTATCATTCATGTGGCTTGGGGATTTCTCTGAACTAGTTTGTTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR TCA 72 bp | AATGATATCATAGGGTTGCATGGATCTATACTAAAGTaGACTACTCAGCTAGATTGCAAAGCAGATACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NDIIGLHGSILK*TTQLDCKADTK Trigger: TTTTGTATCTGCTTTGCAATCTAGCTGAGTAGTTCACTTTAGTATAGATCCATGCAACCCTATGATATCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CCA 72 bp | TACATGAGAATTCACTGTCTTGACACAACTAGACCTTaGGATACAGAATTTACCATTATAATACATAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YMRIHCLDTTRP*DTEFTIIIHSN Trigger: GTTGCTATGTATTATAATGGTAAATTCTGTATCCCAAGGTCTAGTTGTGTCAAGACAGTGAATTCTCATGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGGAGGGCGGGCGGGCGGGCAAAGAAGGGCCTCTCTTGGATGTACCTGGCGGAGGGTCAGGTGCTaGAGCTGGTACTGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: REGGRAGGQRRASLGCTWRRVRC*SWYCST Trigger: AGTGCTACAGTACCAGCTTCAGCACCTGACCCTCCG...CCAGGTACATCCAAGAGAGGCCCTTCTTTGCCCGCCCGCCCGCCCTCCCTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCCTATGCCAAGGGCTGCCTTCTCTGGATTGGTCCTCCATCACGGGGTGCGCGCAAGGCGGGCATaGCTTCTCCCTTGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQPMPRAAFSGLVLHHGVRARRA*LLPCCL Trigger: AAGACAGCAAGGGAGAAGCCATGCCCGCCTTGCGCG...CACCCCGTGATGGAGGACCAATCCAGAGAAGGCAGCCCTTGGCATAGGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | AGGGAGGGCGGGCGGGCGGGCAAAGAAGGGCCTCTCTaGGATGTACCTGGAACAGACTCTCCACTACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: REGGRAGKEGPL*DVPGTDSPLHS Trigger: ACTATGTAGTGGAGAGTCTGTTCCAGGTACATCCAAGAGAGGCCCTTCTTTGCCCGCCCGCCCGCCCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GCGCAGCCATCAGGTTTTGCAGTAAGTGCCTTTCTGTaGAGCCACCGCACCGCCCTTCATGTGCTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQPSGFAVSAFL*SHRTALHVLVS Trigger: GGAAACCAGCACATGAAGGGCGGTGCGGTGGCTCAACAGAAAGGCACTTACTGCAAAACCTGATGGCTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTCCGGAGGGTCAGGTGCTaGAGCTGGTACTGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTEPGKTQPWAERYHFILRRVRC*SWYCST Trigger: AGTGCTACAGTACCAGCTTCAGCACCTGACCCTCCG...GAGTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACGCATGGCTTCTCCCTTaGTGTCTTCCCCTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RELSLERPNPGLSGITSYAWLLP*CLPLLC Trigger: GCACAGGAGGGGAAGACAGCAAGGGAGAAGCCATGC...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACGCAGCGGGGTTTCTCTaGCTCTGCTTTTCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RELSLERPNPGLSGITSYAAGFL*LCFSWR Trigger: TCTCCAGGAAAAGCAGAGGCAGAGAAACCCCGCTGC...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTACTTGTCTCCTGAGCTaGGCATCCGCCTTCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSTCLLS*ASAFAS Trigger: GGAGGCGAAGGCGGATGCCCAGCTCAGGAGACAAGT...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GAAAAACCTCCAAAACCAAGTGAAGGGCAGAAACGGTaGTGTGCTGAGCAGACCCTCTGGGAGTCAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKPPKPSEGQKR*CAEQTLWESVP Trigger: GGGCACTGACTCCCAGAGGGTCTGCTCAGCACACAACCGTTTCTGCCCTTCACTTGGTTTTGGAGGTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTCCCTCCTGTGCACTTCTaGGCTAACTTCAGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTEPGKTQPWAERYHFILPPVHF*ANFRSS Trigger: GGAACTCCTGAAGTTAGCCCAGAAGTGCACAGGAGG...GAGTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | TGCAAGCAAATCCTAGTTATCTTCTGCGTCGCTGCCTaGACGGTCCTGGGAAACGTGAAACTGCACCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKQILVIFCVAA*TVLGNVKLHLG Trigger: TCCCAGGTGCAGTTTCACGTTTCCCAGGACCGTCAAGGCAGCGACGCAGAAGATAACTAGGATTTGCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GCATGCATGCGGAGGTCAGAGGACAACAGAAGAGAGTaGGTCCTCCCCTTCCGGCATATGGATTTTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ACMRRSEDNRRE*VLPFRHMDFGD Trigger: ATCTCCAAAATCCATATGCCGGAAGGGGAGGACCAACTCTCTTCTGTTGTCCTCTGACCTCCGCATGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TCCCCTGCCCAGCAGTCCCTCTCCCAGTATGTTACATaGTTCCAACTCCAGTCCCTAGTATACCTCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPAQQSLSQYVT*FQLQSLVYLPS Trigger: ACTTGGGAGGTATACTAGGGACTGGAGTTGGAACAATGTAACATACTGGGAGAGGGACTGCTGGGCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GCCTTGCTCCCCCAGCTTTGCATAACAATATCCAGATaGCTATTATGCCCCTTCCAGTCGGCTTCCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLPQLCITISR*LLCPFQSASQS Trigger: GGACTGGGAAGCCGACTGGAAGGGGCATAATAGCAATCTGGATATTGTTATGCAAAGCTGGGGGAGCAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CCTAAGGCAGCTACATTACCAACAGCCCACCCAGCCTaGGTGAGACAGGAAAGAGAGATTAATCCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKAATLPTAHPA*VRQEREINPRA Trigger: AGCCCTGGGATTAATCTCTCTTTCCTGTCTCACCAAGGCTGGGTGGGCTGTTGGTAATGTAGCTGCCTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGGGTGCACTTGTCTCCTaGGCTGGGCATCCGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQSLTRSKDASSTILTTQGALVS*AGHPPS Trigger: CGAAGGCGGATGCCCAGCTCAGGAGACAAGTGCACC...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCGGTGCACTTGTCTCCTaGGCTGGGCATCCGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ENSNRFSKMEASISKALSGALVS*AGHPPS Trigger: CGAAGGCGGATGCCCAGCTCAGGAGACAAGTGCACC...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGACTTGTCTCCTGAGCTaGGCATCCGCCTTCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLTRSKDASSTILTTQTCLLS*ASAFAS Trigger: GGAGGCGAAGGCGGATGCCCAGCTCAGGAGACAAGT...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACGGTAGTCCAGAGATTTaGAGTGAGCCCTCTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RELSLERPNPGLSGITSYGSPEI*SEPSYL Trigger: AAGGTAAGAGGGCTCACTCCAAATCTCTGGACTACC...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | GGCTCTCCATGGAGGCATCTCTCCCAAACTCCCAGTTaGCAGAGTAAGAGCCACAATCGTCTGCAGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPWRHLSQTPS*QSKSHNRLQYF Trigger: GAAATACTGCAGACGATTGTGGCTCTTACTCTGCAAACTGGGAGTTTGGGAGAGATGCCTCCATGGAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CCTGAGGATCTGGGGCTTGGGACTGGGATTTTTGTTTaGCTTCGTTTCCACTGGTGGGCCATCAGCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEDLGLGTGIFV*LRFHWWAISYV Trigger: AACATAGCTGATGGCCCACCAGTGGAAACGAAGCAAAACAAAAATCCCAGTCCCAAGCCCCAGATCCTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GGAAACCCTCGAAAGGACTTCACTAAGTGGCCTGTCTaGCCATCCTCCTGGATCTTGTACTTTAGGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GNPRKDFTKWPV*PSSWILYFRST Trigger: CGTGCTCCTAAAGTACAAGATCCAGGAGGATGGCAAGACAGGCCACTTAGTGAAGTCCTTTCGAGGGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TACACAGTGACTCAGGACTCGTGTGGCACTGCGAGGTaGTTACAAATTCAAGGACATCCTGGCCTACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTVTQDSCGTAR*LQIQGHPGLRG Trigger: ACCTCGTAGGCCAGGATGTCCTTGAATTTGTAACAACCTCGCAGTGCCACACGAGTCCTGAGTCACTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | AAGAAACACCATGCCCGCCCACCAATGCCTTCATTTTaGATTTCCTGGTTTCCAGAAGGGCAGGCGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKHHARPPMPSF*ISWFPEGQARE Trigger: TTCCCTCGCCTGCCCTTCTGGAAACCAGGAAATCAAAAATGAAGGCATTGGTGGGCGGGCATGGTGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GTCATCTGTGTTCAGTGTCCTGCTGGTTCTCCATGCTaGTCTCCCACACAAGTCCCAGACAACTTCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VICVQCPAGSPC*SPTQVPDNFKE Trigger: CTCCTTGAAGTTGTCTGGGACTTGTGTGGGAGACAAGCATGGAGAACCAGCAGGACACTGAACACAGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTCCAGAGATTTGGAGTaGGCCCTCTTACCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RELSLERPNPGLSGITSYSRDLE*ALLPLR Trigger: TCTTAAAGGTAAGAGGGCTCACTCCAAATCTCTGGA...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCCGCGCAAGGCGGGCATaGCTTCTCCCTTGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENSNRFSKMEASISKALSRARRA*LLPCCL Trigger: AAGACAGCAAGGGAGAAGCCATGCCCGCCTTGCGCG...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACCGCTGGGATCTCATATaGCTGATAGTACCTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RELSLERPNPGLSGITSYRWDLI*LIVPTS Trigger: AGAAGTAGGTACTATCAGCCATATGAGATCCCAGCG...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | CCATCAACTTTTTCCACAGCCCCCAGGCTGTTTGCATaGTTCGCTTTGTGTCTTGTGCTACCAGTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSTFSTAPRLFA*FALCLVLPVMD Trigger: GTCCATCACTGGTAGCACAAGACACAAAGCGAACAATGCAAACAGCCTGGGGGCTGTGGAAAAAGTTGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TTCACTAAGTGGCCTGTCTTGCCATCCTCCTGGATCTaGTACTTTAGGAGCACGAAGCACAAGATGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTKWPVLPSSWI*YFRSTKHKMWA Trigger: TGCCCACATCTTGTGCTTCGTGCTCCTAAAGTACAAGATCCAGGAGGATGGCAAGACAGGCCACTTAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CTGGGATTTCCTGAGACACCAGTGGGTGCTGCAGCTTaGTGGCCTAGACAACAACAAACAGGACTATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGFPETPVGAAA*WPRQQQTGLFV Trigger: CACAAATAGTCCTGTTTGTTGTTGTCTAGGCCACAAAGCTGCAGCACCCACTGGTGTCTCAGGAAATCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GCTGCTTCATGTACCTGGAACAGACTGGGGCAGGATTaGAACCAAGTTCTCACGTGCTCTACGGTTCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: AASCTWNRLGQD*NQVLTCSTVLM Trigger: CATTAGAACCGTAGAGCACGTGAGAACTTGGTTCAAATCCTGCCCCAGTCTGTTCCAGGTACATGAAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR GCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGGCAGCGGGGTTTCTCTaGCTCTGCTTTTCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSLTRSKDASSTILTTQAAGFL*LCFSWR Trigger: TCTCCAGGAAAAGCAGAGGCAGAGAAACCCCGCTGC...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTTGTCTTCCCCTCCTGTaGACTTCTGGGCTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: APLLELQSLTRSKDASSTCLPLL*TSGLTS Trigger: TGAAGTTAGCCCAGAAGTGCACAGGAGGGGAAGACA...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCGCATGGCTTCTCCCTTaGTGTCTTCCCCTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENSNRFSKMEASISKALSAWLLP*CLPLLC Trigger: GCACAGGAGGGGAAGACAGCAAGGGAGAAGCCATGC...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | TCGCGTGTCTGCTTCGGCAGAACATTCTTTCACCTGTaGACCCCAGGCAAAACATATGACACTACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRVCFGRTFFHL*TPGKTYDTTEL Trigger: AAGCTCAGTAGTGTCATATGTTTTGCCTGGGGTCAACAGGTGAAAGAATGTTCTGCCGAAGCAGACACGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCTGCCTCTGCTTTTCCTaGAGAGCTTCCCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSNRFSKMEASISKALSCLCFS*RASLSH Trigger: GTGGCTGAGGGAAGCTCTCCAGGAAAAGCAGAGGCA...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGCCTCCTGTGCACTTCTaGGCTAACTTCAGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLTRSKDASSTILTTQPPVHF*ANFRSS Trigger: GGAACTCCTGAAGTTAGCCCAGAAGTGCACAGGAGG...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | CTATGCAAACTAACAGTCAACATTCGGTTTTCTTTGCAATTGCGTGCTCTAGAACGCGCAAGGCGGGCATaGCTTCTCCCTTGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCKLTVNIRFSLQLRALERARRA*LLPCCL Trigger: AAGACAGCAAGGGAGAAGCCATGCCCGCCTTGCGCG...TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTTGACTGTTAGTTTGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAAAGAAAACATAAACTACGTAGTTCTATATAGCCAGAAATGCCAAATCACTTGTCTCCTGAGCTaGGCATCCGCCTTCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: APKENINYVVLYSQKCQITCLLS*ASAFAS Trigger: GGAGGCGAAGGCGGATGCCCAGCTCAGGAGACAAGT...GATTTGGCATTTCTGGCTATATAGAACTACGTAGTTTATGTTTTCTTTGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAACGCCCCAATCAAGACTGCCTCTCTTCCCTAATGAGTGTGTCTCTTGAACATAAGGTAAGGGTTTaGTGCACTTGTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRPNQDCLSSLMSVSLEHKVRV*CTCLLS Trigger: GCTCAGGAGACAAGTGCACCAAACCCTTACCTTATG...TTCAAGAGACACACTCATTAGGGAAGAGAGGCAGTCTTGATTGGGGCGTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTGGTAGTCCAGAGATTTaGAGTGAGCCCTCTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: APLLELQSLTRSKDASSTGSPEI*SEPSYL Trigger: AAGGTAAGAGGGCTCACTCCAAATCTCTGGACTACC...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTAATGAATCATACCAAGTTAGCAACAACCAAGCAGGTAACATTCCCAATGGTGCACTTGTCTCCTaGGCTGGGCATCCGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ISNESYQVSNNQAGNIPNGALVS*AGHPPS Trigger: CGAAGGCGGATGCCCAGCTCAGGAGACAAGTGCACC...ATTGGGAATGTTACCTGCTTGGTTGTTGCTAACTTGGTATGATTCATTAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR TCA 90 bp | CTATGCAAACTAACAGTCAACATTCGGTTTTCTTTGCAATTGCGTGCTCTAGAACGGAGGGTCAGGTGCTaGAGCTGGTACTGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCKLTVNIRFSLQLRALERRVRC*SWYCST Trigger: AGTGCTACAGTACCAGCTTCAGCACCTGACCCTCCG...TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTTGACTGTTAGTTTGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTCGCTGGGATCTCATATaGCTGATAGTACCTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: APLLELQSLTRSKDASSTRWDLI*LIVPTS Trigger: AGAAGTAGGTACTATCAGCCATATGAGATCCCAGCG...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | CTTCATCCCAGAGATACCACTGGAAATTCTGGTGAGTaGAAACTTCAAAGGGCTCCGTCAGGGAGACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHPRDTTGNSGE*KLQRAPSGRQK Trigger: TTTCTGTCTCCCTGACGGAGCCCTTTGAAGTTTCAACTCACCAGAATTTCCAGTGGTATCTCTGGGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TGCTTGCTTCCAGAGGCTCGTAATCTTGGCTTAGGTTaGGAAAGGAAAGCTTCCCTGCAGAGTGGAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLPEARNLGLG*ERKASLQSGMF Trigger: AAACATTCCACTCTGCAGGGAAGCTTTCCTTTCCAAACCTAAGCCAAGATTACGAGCCTCTGGAAGCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | AGTTTGAGGGCACAGTATTGGATTTGGACTCAGAGTTaGAGGTACAGAGAAGGCATGGCAGGAATGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRAQYWIWTQS*RYREGMAGMAS Trigger: AGATGCCATTCCTGCCATGCCTTCTCTGTACCTCAAACTCTGAGTCCAAATCCAATACTGTGCCCTCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CAGCTTTGTGGCCTAGACAACAACAAACAGGACTATTaGTGGAGCTATGAGCTGACAATGACACAGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCGLDNNKQDY*WSYELTMTQSG Trigger: CCCACTCTGTGTCATTGTCAGCTCATAGCTCCACAAATAGTCCTGTTTGTTGTTGTCTAGGCCACAAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTaGTACACCCCCTCTCTGATTTCACCAATTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQSSRRKKLYGM*YTPSLISPITG Trigger: TCCTGTAATTGGTGAAATCAGAGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCAGAGCTCCAGAAGGAAGAAATTATACGGCATGTTGTACACCCCCTCTTGGTCAGGGTACTTCTaGAATCCCCATTTATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: KGQSSRRKKLYGMLYTPSWSGYF*NPHLYL Trigger: TAGATATAAATGGGGATTCCAGAAGTACCCTGACCA...AGAGGGGGTGTACAACATGCCGTATAATTTCTTCCTTCTGGAGCTCTGGCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCTGCCTCTGCTTTTCCTaGAGAGCTTCCCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHSFPMLSSHVTITDTISCLCFS*RASLSH Trigger: GTGGCTGAGGGAAGCTCTCCAGGAAAAGCAGAGGCA...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCTATGCAAACTAACAGTCAACATTCGGTTTTCTTTGCAATTGCGTGCTCTTGCCTCTGCTTTTCCTaGAGAGCTTCCCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAMQTNSQHSVFFAIACSCLCFS*RASLSH Trigger: GTGGCTGAGGGAAGCTCTCCAGGAAAAGCAGAGGCA...AGAGCACGCAATTGCAAAGAAAACCGAATGTTGACTGTTAGTTTGCATAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGCATAAGGTAAGGGTTTaGTGCACTTGTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLTRSKDASSTILTTQHKVRV*CTCLLS Trigger: GCTCAGGAGACAAGTGCACCAAACCCTTACCTTATG...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | GATGCTGAGATGACAATCCTGTACCATCACACTAGGTaGACAGGTTGCTGGGAATTCTTCCTGCATACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DAEMTILYHHTR*TGCWEFFLHTK Trigger: CTTAGTATGCAGGAAGAATTCCCAGCAACCTGTCAACCTAGTGTGATGGTACAGGATTGTCATCTCAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | AAACGATGGTTTAGCTGGAAGGAAAGGCTAGACTGCTaGACATTCAGTTTGGAAAGGATACGGACATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRWFSWKERLDC*TFSLERIRTWH Trigger: GTGCCATGTCCGTATCCTTTCCAAACTGAATGTCAAGCAGTCTAGCCTTTCCTTCCAGCTAAACCATCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CTCCCTACGCTGACTGTCCCATTTAGAGAACTCAAATaGGAAAATAGCTGTCCTTACGAGTTTGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTLTVPFRELK*ENSCPYEFAAW Trigger: CCATGCTGCAAACTCGTAAGGACAGCTATTTTCCAATTTGAGTTCTCTAAATGGGACAGTCAGCGTAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGTAGAATCCATCCATACATGTACTTACTCACTTGTGTGTGTTAACATGCCTCCTGTGCACTTCTaGGCTAACTTCAGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACVESIHTCTYSLVCVNMPPVHF*ANFRSS Trigger: GGAACTCCTGAAGTTAGCCCAGAAGTGCACAGGAGG...CATGTTAACACACACAAGTGAGTAAGTACATGTATGGATGGATTCTACACAAGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTATACTGACAACCCAGCGCTGGGATCTCATATaGCTGATAGTACCTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSLTRSKDASSTILTTQRWDLI*LIVPTS Trigger: AGAAGTAGGTACTATCAGCCATATGAGATCCCAGCG...CTGGGTTGTCAGTATAGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | CTTGCCATTCATTCTGGACAGAGGGAAAAATCACGATaGTTCCAGGAATGGCCCATCCGCCAATTAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAIHSGQREKSR*FQEWPIRQLKS Trigger: ACTTTTTAATTGGCGGATGGGCCATTCCTGGAACAATCGTGATTTTTCCCTCTGTCCAGAATGAATGGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | AGGATGCCGCCGACGCTAGAAAGTGTACCAAAGACATaGGAAAGCCATTCTCATGTGATTGTCCTAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RMPPTLESVPKT*ESHSHVIVLIN Trigger: ATTGATTAGGACAATCACATGAGAATGGCTTTCCAATGTCTTTGGTACACTTTCTAGCGTCGGCGGCATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CCCAAGAGGCATGGCGGGTTGATGGTTGGTTGCAGTTaGTTAAGTAGTTGTGTACAAAGAAAGAGAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKRHGGLMVGCS*LSSCVQRKRKG Trigger: TCCTTTTCTCTTTCTTTGTACACAACTACTTAACAAACTGCAACCAACCATCAACCCGCCATGCCTCTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TCTAAGCACATAACTAGATTCCCATCTGGAGCTGTCTaGGAAATCATCATGCTCTCAGATTCCTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKHITRFPSGAV*EIIMLSDSCCP Trigger: AGGACAGCAGGAATCTGAGAGCATGATGATTTCCAAGACAGCTCCAGATGGGAATCTAGTTATGTGCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | ATAGCTATGTTCCTTATTTGCATATGTTTGCACCCATaGCCAGCTGTCCCGAAGAGCAAGAGAGCGACTATA | + |
|
Preference number: 4 (lower is better) Translates to: IAMFLICICLHP*PAVPKSKRATI Trigger: TATAGTCGCTCTCTTGCTCTTCGGGACAGCTGGCAATGGGTGCAAACATATGCAAATAAGGAACATAGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CTCAGCCTAAGTGTTGGGATCACAGGTTATGAGCCATaGTGCCACATCATCTCAGTATTATGTCATTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSVGITGYEP*CHIISVLCHYR Trigger: CCTGTAATGACATAATACTGAGATGATGTGGCACAATGGCTCATAACCTGTGATCCCAACACTTAGGCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | ATTAGAGCAAGGCAGGTATCAACCCTCTATACTAGTTaGTCTACTTCCCCAAGGTATCACTTGCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRARQVSTLYTS*STSPRYHLLCS Trigger: AGAGCAGAGCAAGTGATACCTTGGGGAAGTAGACAAACTAGTATAGAGGGTTGATACCTGCCTTGCTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | ATTTTTGACCTAGAGTTTGAGGGCACAGTATTGGATTaGGACTCAGAGTTTGAGGTACAGAGAAGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFDLEFEGTVLD*DSEFEVQRRHG Trigger: GCCATGCCTTCTCTGTACCTCAAACTCTGAGTCCAAATCCAATACTGTGCCCTCAAACTCTAGGTCAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | GCTCCTCTGCTAGAGCTGCAGTCACTTACAAGAAGTAAAGATGCAAGCAGCACTTCATTTTATCTAGATTaGGGTAGTCCAGAGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: APLLELQSLTRSKDASSTSFYLD*GSPEIW Trigger: CCAAATCTCTGGACTACCTCAATCTAGATAAAATGA...AGTGCTGCTTGCATCTTTACTTCTTGTAAGTGACTGCAGCTCTAGCAGAGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGACTTTTATCCACATATTCCTTCATAGAGTATACTCATTTGGAAAGACTGCAGCGGGGTTTCTCTaGCTCTGCTTTTCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGTFIHIFLHRVYSFGKTAAGFL*LCFSWR Trigger: TCTCCAGGAAAAGCAGAGGCAGAGAAACCCCGCTGC...AGTCTTTCCAAATGAGTATACTCTATGAAGGAATATGTGGATAAAAGTCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR GCA 90 bp | CTATGCAAACTAACAGTCAACATTCGGTTTTCTTTGCAATTGCGTGCTCTAGAATGTCTTCCCCTCCTGTaGACTTCTGGGCTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCKLTVNIRFSLQLRALECLPLL*TSGLTS Trigger: TGAAGTTAGCCCAGAAGTGCACAGGAGGGGAAGACA...TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTTGACTGTTAGTTTGCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | AGCTGTCCCGAAGAGCAAGAGAGCGACTATATCTCCTaGTTATCAAGGAGATTTCTGTTCAAAGCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCPEEQESDYIS*LSRRFLFKAKD Trigger: ATCTTTGGCTTTGAACAGAAATCTCCTTGATAACAAGGAGATATAGTCGCTCTCTTGCTCTTCGGGACAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | ACCAAATCAGACACACTCGGATTTGGGATGCTCTTCTaGATATCTGGTGAGCTTCCCTCAAAACTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKSDTLGFGMLF*ISGELPSKLSK Trigger: TTTTGAGAGTTTTGAGGGAAGCTCACCAGATATCAAGAAGAGCATCCCAAATCCGAGTGTGTCTGATTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | ATCAGCGATGGCAAGCCACTGGAATATCACGAGAAATaGTCTGGCAAGTTACTCTCTATGAAGTCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISDGKPLEYHEK*SGKLLSMKSQS Trigger: ACTTTGTGACTTCATAGAGAGTAACTTGCCAGACAATTTCTCGTGATATTCCAGTGGCTTGCCATCGCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | AATCCTACTACTCGACAAAAGACATTAGATGAAGACTaGTCACGGTGGCTCCAGAGAGAGAAAAGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NPTTRQKTLDED*SRWLQREKSLL Trigger: GAGCAAACTTTTCTCTCTCTGGAGCCACCGTGACAAGTCTTCATCTAATGTCTTTTGTCGAGTAGTAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | CTATGCAAACTAACAGTCAACATTCGGTTTTCTTTGCAATTGCGTGCTCTAGAACATAAGGTAAGGGTTTaGTGCACTTGTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCKLTVNIRFSLQLRALEHKVRV*CTCLLS Trigger: GCTCAGGAGACAAGTGCACCAAACCCTTACCTTATG...TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTTGACTGTTAGTTTGCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAAAGAAAACATAAACTACGTAGTTCTATATAGCCAGAAATGCCAAATCGGTAGTCCAGAGATTTaGAGTGAGCCCTCTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: APKENINYVVLYSQKCQIGSPEI*SEPSYL Trigger: AAGGTAAGAGGGCTCACTCCAAATCTCTGGACTACC...GATTTGGCATTTCTGGCTATATAGAACTACGTAGTTTATGTTTTCTTTGGGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | CAAGTTAGCAACAACCAAGCAGGTAACATTCCCAATTaGGGTGTCAGACTCATAAAGGTGAAATTACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSNNQAGNIPN*GVRLIKVKLLH Trigger: GTGCAGTAATTTCACCTTTATGAGTCTGACACCCAAATTGGGAATGTTACCTGCTTGGTTGTTGCTAACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | TCTATGGTAAGGCCTGTGGGAATGAAATCCAGAGTATaGACAAAGTTAAGTCCTCAGAGAGGAGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMVRPVGMKSRV*TKLSPQRGAFL Trigger: AAGAAAAGCTCCTCTCTGAGGACTTAACTTTGTCAATACTCTGGATTTCATTCCCACAGGCCTTACCATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GAACTGGAAGAAAACATTATTGCCTCTGAAATAGCCTaGCTCCCCCAGCTTTGCATAACAATATCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: ELEENIIASEIA*LPQLCITISRL Trigger: CAATCTGGATATTGTTATGCAAAGCTGGGGGAGCAAGGCTATTTCAGAGGCAATAATGTTTTCTTCCAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | ACATCACCAGGAATAGAATCTGCTAGTTCCTTCTCTTaGGGCTTTACTGCCTCAGTTACTGTGAAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSPGIESASSFS*GFTASVTVKQK Trigger: TTTCTGTTTCACAGTAACTGAGGCAGTAAAGCCCAAAGAGAAGGAACTAGCAGATTCTATTCCTGGTGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GACAGTCAAAGACACACAAAGAAACTTTCCGGACCATaGAAAAGAGGCCAGTACTCTATCCTATTGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSQRHTKKLSGP*KRGQYSILLNV Trigger: GACATTCAATAGGATAGAGTACTGGCCTCTTTTCAATGGTCCGGAAAGTTTCTTTGTGTGTCTTTGACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCTGTCAGCTGGCTCCTTaGTGTTCATTTTATCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENSNRFSKMEASISKALSCQLAP*CSFYLD Trigger: ATCTAGATAAAATGAACATCAAGGAGCCAGCTGACA...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR TCA 90 bp | TGCCATGAGGTTCCAAACTGTTTTCCCATTTCTAAAGCTATAATCATAAAGGGTTCCAGAGATTTGGAGTaGGCCCTCTTACCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHEVPNCFPISKAIIIKGSRDLE*ALLPLR Trigger: TCTTAAAGGTAAGAGGGCTCACTCCAAATCTCTGGA...ACCCTTTATGATTATAGCTTTAGAAATGGGAAAACAGTTTGGAACCTCATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCTGTCAGCTGGCTCCTTaGTGTTCATTTTATCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHSFPMLSSHVTITDTISCQLAP*CSFYLD Trigger: ATCTAGATAAAATGAACATCAAGGAGCCAGCTGACA...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR CCA 90 bp | CTATGCAAACTAACAGTCAACATTCGGTTTTCTTTGCAATTGCGTGCTCTAGAATGGTCAGGGTACTTCTaGAATCCCCATTTATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCKLTVNIRFSLQLRALEWSGYF*NPHLYL Trigger: TAGATATAAATGGGGATTCCAGAAGTACCCTGACCA...TTCTAGAGCACGCAATTGCAAAGAAAACCGAATGTTGACTGTTAGTTTGCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | AGAATGATATTGCCAAGACATTATCACCATTCAGTATaGACAGTCCCCATGTCCAGCTTTGTGATCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: RMILPRHYHHSV*TVPMSSFVITF Trigger: AAATGTGATCACAAAGCTGGACATGGGGACTGTCAATACTGAATGGTGATAATGTCTTGGCAATATCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TATAGAATATTTAACTCAGGGAAAATCCACAAGCTTTaGATCACTAACTGCCATCCAGTCCCTAGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRIFNSGKIHKL*ITNCHPVPSLA Trigger: TGCCAAACTAGGGACTGGATGGCAGTTAGTGATCAAAAGCTTGTGGATTTTCCCTGAGTTAAATATTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CTCTTTAGAAATAGTTCTTTGGGTCAATTCCAATCTTaGTTGTCAGCAGTCCAGTCCTTTAGCAAAATACCG | + |
|
Preference number: 4 (lower is better) Translates to: LFRNSSLGQFQS*LSAVQSFSKIP Trigger: CGGTATTTTGCTAAAGGACTGGACTGCTGACAACAAAGATTGGAATTGACCCAAAGAACTATTTCTAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GCATGGATCTATACTAAAGTGAACTACTCAGCTAGATaGCAAAGCAGATACAAAATAATCCCCATCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWIYTKVNYSAR*QSRYKIIPILL Trigger: GAGAAGGATGGGGATTATTTTGTATCTGCTTTGCAATCTAGCTGAGTAGTTCACTTTAGTATAGATCCATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TTCTCCTTGGCTAATGATGTGAATCACAAAACTATCTaGATACTTGAGACTGGCATTAACTGCCACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLANDVNHKTI*ILETGINCHIH Trigger: ATGGATGTGGCAGTTAATGCCAGTCTCAAGTATCAAGATAGTTTTGTGATTCACATCATTAGCCAAGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | CCAACTTCCTGTGATTCTATGGCAGCCTTGACTATGTaGCAAAATGATTTATGCTCAGCAGAAATTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PTSCDSMAALTM*QNDLCSAEIVL Trigger: AAGTACAATTTCTGCTGAGCATAAATCATTTTGCAACATAGTCAAGGCTGCCATAGAATCACAGGAAGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCGTTTCCCATGTTAAGTTCCCATGTAACTATCACAGATACCATTTCCTCATTTTATCTAGATTaGGGTAGTCCAGAGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHSFPMLSSHVTITDTISSFYLD*GSPEIW Trigger: CCAAATCTCTGGACTACCTCAATCTAGATAAAATGA...GGAAATGGTATCTGTGATAGTTACATGGGAACTTAACATGGGAAACGAATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | GAAGTCCATTTCAGAATTCTTACCCAGAGAATGATATaGCCAAGACATTATCACCATTCAGTATTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVHFRILTQRMI*PRHYHHSVLTV Trigger: GACTGTCAATACTGAATGGTGATAATGTCTTGGCAATATCATTCTCTGGGTAAGAATTCTGAAATGGACTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TCATTAACTGGGAGTAAGGGACACCACATGTTCACATaGCATCTACATACGTTAAGATTTAAATGCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTGSKGHHMFT*HLHTLRFKCSD Trigger: ATCACTGCATTTAAATCTTAACGTATGTAGATGCAATGTGAACATGTGGTGTCCCTTACTCCCAGTTAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS-3UTR TCA 90 bp | ATTTCTAATGAATCATACCAAGTTAGCAACAACCAAGCAGGTAACATTCCCAATTGTCAGCTGGCTCCTTaGTGTTCATTTTATCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISNESYQVSNNQAGNIPNCQLAP*CSFYLD Trigger: ATCTAGATAAAATGAACATCAAGGAGCCAGCTGACA...ATTGGGAATGTTACCTGCTTGGTTGTTGCTAACTTGGTATGATTCATTAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTAATGAATCATACCAAGTTAGCAACAACCAAGCAGGTAACATTCCCAATTCATTTTATCTAGATTaGGGTAGTCCAGAGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISNESYQVSNNQAGNIPNSFYLD*GSPEIW Trigger: CCAAATCTCTGGACTACCTCAATCTAGATAAAATGA...ATTGGGAATGTTACCTGCTTGGTTGTTGCTAACTTGGTATGATTCATTAGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| 3UTR CAA 72 bp | CTGGTTTTAGACCTCATATCAAACCTCTCAGGAATGTaGAAACATTTCTTAAAGTGTGTTTTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLDLISNLSGM*KHFLKCVLCVC Trigger: ACACACACACAAAACACACTTTAAGAAATGTTTCAACATTCCTGAGAGGTTTGATATGAGGTCTAAAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | AATAAGTACAGAAGAGGCCCTGCATTTGAGGAGTGGTaGAACAGACAAGATTTGGAAATTCTCAAAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: NKYRRGPAFEEW*NRQDLEILKII Trigger: TATAATTTTGAGAATTTCCAAATCTTGTCTGTTCAACCACTCCTCAAATGCAGGGCCTCTTCTGTACTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TCTCAGTGCTGCAAGAAGAAACTTATCCAATCAAGGTaGAGATTATCTCTATTCTCTGGATACAAACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQCCKKKLIQSR*RLSLFSGYKQN Trigger: GTTTTGTTTGTATCCAGAGAATAGAGATAATCTCAACCTTGATTGGATAAGTTTCTTCTTGCAGCACTGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TGTCAAATTCATGATAAAGTTGCCATGATGATCCAATaGCATAATATCATTGGTTCCTGGTACACAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQIHDKVAMMIQ*HNIIGSWYTMK Trigger: CTTCATTGTGTACCAGGAACCAATGATATTATGCAATTGGATCATCATGGCAACTTTATCATGAATTTGACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| 3UTR CAA 72 bp | TGGGTGTACCCTTGTGGAAAATATTGCAAACATCATTaGACTTTTTCTCTGAACATGTTAGTTTATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVYPCGKYCKHH*TFSLNMLVYFP Trigger: AGGGAAATAAACTAACATGTTCAGAGAAAAAGTCAAATGATGTTTGCAATATTTTCCACAAGGGTACACCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS GCA 90 bp | CCGGCGCATGGGCGAGCAGGGTGTGCTAGAGCAGCGGGGTTTCTCTaGCTCTGCTTTTCCTGGAGAGCTTCCCTCAGCCACAGGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAHGRAGCARAAGFL*LCFSWRASLSHRQG Trigger: CCCTTGCCTGTGGCTGAGGGAAGCTCTCCAGGAAAAGCAGAGGCAGAGAAACCCCGCTGCTCTAGCACACCCTGCTCGCCCATGCGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS GCA 90 bp | CATGGGCGAGCAGGGTGTGCTAGAGCAGCGGGGTTTCTCTGCCTCTaGTTTTCCTGGAGAGCTTCCCTCAGCCACAGGCAAGGGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGRAGCARAAGFLCL*FSWRASLSHRQGQG Trigger: ACCCTGCCCTTGCCTGTGGCTGAGGGAAGCTCTCCAGGAAAAGCAGAGGCAGAGAAACCCCGCTGCTCTAGCACACCCTGCTCGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS CCA 90 bp | GCAAGGGCCCATGGAGGGCCTTATAAGGTTCATAAGGTAAGGGTTTaGTGCACTTGTCTCCTGAGCTGGGCATCCGCCTTCGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARAHGGPYKVHKVRV*CTCLLSWASAFASC Trigger: GCAGGAGGCGAAGGCGGATGCCCAGCTCAGGAGACAAGTGCACCAAACCCTTACCTTATGAACCTTATAAGGCCCTCCATGGGCCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS GCA 90 bp | AGGGCCCATGGAGGGCCTTATAAGGTTCATAAGGTAAGGGTTTGGTaGACTTGTCTCCTGAGCTGGGCATCCGCCTTCGCCTCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAHGGPYKVHKVRVW*TCLLSWASAFASCH Trigger: ATGGCAGGAGGCGAAGGCGGATGCCCAGCTCAGGAGACAAGTGCACCAAACCCTTACCTTATGAACCTTATAAGGCCCTCCATGGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACAAGGGTTTGGTGCACTaGTCTCCTGAGCTGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RELSLERPNPGLSGITSYKGLVH*SPELGI Trigger: GATGCCCAGCTCAGGAGACAAGTGCACCAAACCCTT...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS CCA 90 bp | GGGCATCCGCCTTCGCCTCCTGCCATTAACCGCTGGGATCTCATATaGCTGATAGTACCTACTTCTAGTTTTATACAGACGAGAGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: GHPPSPPAINRWDLI*LIVPTSSFIQTRGT Trigger: CGTTCCTCTCGTCTGTATAAAACTAGAAGTAGGTACTATCAGCCATATGAGATCCCAGCGGTTAATGGCAGGAGGCGAAGGCGGATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACGTGTCAGCTGGCTCCTaGATGTTCATTTTATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RELSLERPNPGLSGITSYVSAGS*MFILSR Trigger: TCTAGATAAAATGAACATCAAGGAGCCAGCTGACAC...GTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCCTGGAAAGACCCAACCCTGGGCTGAGCGGTATCACTTCATACTCGTGTCAGCTGGCTCCTaGATGTTCATTTTATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTEPGKTQPWAERYHFILVSAGS*MFILSR Trigger: TCTAGATAAAATGAACATCAAGGAGCCAGCTGACAC...GAGTATGAAGTGATACCGCTCAGCCCAGGGTTGGGTCTTTCCAGGCTCAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACTCTAATCGATTCAGTAAGATGGAAGCCAGCATCTCCAAAGCTCTTTCCAAGGGTTTGGTGCACTaGTCTCCTGAGCTGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ENSNRFSKMEASISKALSKGLVH*SPELGI Trigger: GATGCCCAGCTCAGGAGACAAGTGCACCAAACCCTT...GGAAAGAGCTTTGGAGATGCTGGCTTCCATCTTACTGAATCGATTAGAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACAAAACCGTCCTGTTCAGAAGAGTCTCACAGGTGGGAAAAGGGAAGACCGTGTCAGCTGGCTCCTaGATGTTCATTTTATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KNKTVLFRRVSQVGKGKTVSAGS*MFILSR Trigger: TCTAGATAAAATGAACATCAAGGAGCCAGCTGACAC...GGTCTTCCCTTTTCCCACCTGTGAGACTCTTCTGAACAGGACGGTTTTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053033.14 |
||
| CDS CCA 72 bp | GCTAGAGCAGCGGGGTTTCTCTGCCTCTGCTTTTCCTaGAGAGCTTCCCTCAGCCACAGGCAAGGGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARAAGFLCLCFS*RASLSHRQGQG Trigger: ACCCTGCCCTTGCCTGTGGCTGAGGGAAGCTCTCCAGGAAAAGCAGAGGCAGAGAAACCCCGCTGCTCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS CAA 90 bp | CCCGTGTCCAGCTGTTTAGCGCGCAAGGCGGGCATGGCTTCTCCCTaGCTGTCTTCCCCTCCTGTGCACTTCTGGGCTAACTTCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PVSSCLARKAGMASP*LSSPPVHFWANFRS Trigger: ACTCCTGAAGTTAGCCCAGAAGTGCACAGGAGGGGAAGACAGCAAGGGAGAAGCCATGCCCGCCTTGCGCGCTAAACAGCTGGACACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS GCA 72 bp | CGGGCATGGCTTCTCCCTTGCTGTCTTCCCCTCCTGTaGACTTCTGGGCTAACTTCAGGAGTTCCTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAWLLPCCLPLL*TSGLTSGVPHQ Trigger: CTGGTGAGGAACTCCTGAAGTTAGCCCAGAAGTGCACAGGAGGGGAAGACAGCAAGGGAGAAGCCATGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS CCA 72 bp | GCTGGGCATCCGCCTTCGCCTCCTGCCATTAACCGCTaGGATCTCATATGGCTGATAGTACCTACTTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGHPPSPPAINR*DLIWLIVPTSS Trigger: ACTAGAAGTAGGTACTATCAGCCATATGAGATCCCAGCGGTTAATGGCAGGAGGCGAAGGCGGATGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS CCA 72 bp | CATGGAGGGCCTTATAAGGTTCATAAGGTAAGGGTTTaGTGCACTTGTCTCCTGAGCTGGGCATCCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HGGPYKVHKVRV*CTCLLSWASAF Trigger: GAAGGCGGATGCCCAGCTCAGGAGACAAGTGCACCAAACCCTTACCTTATGAACCTTATAAGGCCCTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053033.14 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||
| CDS CCA 72 bp | CCTTCGCCTCCTGCCATTAACCGCTGGGATCTCATATaGCTGATAGTACCTACTTCTAGTTTTATACAGACG | + |
|
Preference number: 6 (lower is better) Translates to: PSPPAINRWDLI*LIVPTSSFIQT Trigger: CGTCTGTATAAAACTAGAAGTAGGTACTATCAGCCATATGAGATCCCAGCGGTTAATGGCAGGAGGCGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053033.14 ENSMUST00000142234.2 ENSMUST00000149927.2 ENSMUST00000153115.8 |
||