RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MACF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028649

Ensembl transcript IDs: ENSMUST00000082108.12, ENSMUST00000084301.12, ENSMUST00000097897.11, ENSMUST00000106220.9, ENSMUST00000106224.8, ENSMUST00000123765.8, ENSMUST00000125447.3, ENSMUST00000134458.8, ENSMUST00000140596.2, ENSMUST00000147030.2, ENSMUST00000147228.8, ENSMUST00000149022.8, ENSMUST00000151346.8, ENSMUST00000154824.8, ENSMUST00000238555.2, ENSMUST00000238731.2, ENSMUST00000238866.2

Found 4325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTACCCCTGAATCCTAGCAGCTATGCGCCCTTTAACACCCAGTATTaGGACATTATGTTAAGACAGTATTGCAATGAACTCTTTGCTATA +
Preference number: 1 (lower is better)
Translates to: LPLNPSSYAPFNTQY*DIMLRQYCNELFAI
Trigger: TATAGCAAAGAGTTCATTGCAATACTGTCTTAACATAATGTCTCAATACTGGGTGTTAAAGGGCGCATAGCTGCTAGGATTCAGGGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGGCCTGGGGCCTGGTaGGCACAGGAGTCACTGAGG +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGPGAW*AQESLR
Trigger: CCTCAGTGACTCCTGTGCTCACCAGGCCCCAGGCCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCCCTCACCAGGGCCTaGGGCCTGGTGAGCACAGGA +
Preference number: 2 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPLTRA*GLVSTG
Trigger: TCCTGTGCTCACCAGGCCCCAGGCCCTGGTGAGGGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGCAGGATTCAAAGTaGATAGTGGTGTGGGGCGCT +
Preference number: 2 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEQDSK*IVVWGA
Trigger: AGCGCCCCACACCACTATCCACTTTGAATCCTGCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCCCTCACCAGGGCCTaGGGCCTGGTGAGCACAGGA +
Preference number: 2 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPLTRA*GLVSTG
Trigger: TCCTGTGCTCACCAGGCCCCAGGCCCTGGTGAGGGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTTTCCTTTACCCCTaGATCCTAGCAGCTATGCGC +
Preference number: 2 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFLYP*ILAAMR
Trigger: GCGCATAGCTGCTAGGATTCAGGGGTAAAGGAAACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCACAGGAGTCACTaGGGGCTGGGTTGGACAGTT +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEHRSH*GLGWTV
Trigger: AACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGCACAGGAGTCACTaGGGGCTGGGTTGGACAGTT +
Preference number: 2 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEHRSH*GLGWTV
Trigger: AACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAAATATTTCATCTCTaGGCCCTATCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQIFHL*ALSVTG
Trigger: CCCTGTAACAGATAGGGCCCAGAGATGAAATATTTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCAGGATTCAAAGTaGATAGTGGTGTGGGGCGCT +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEQDSK*IVVWGA
Trigger: AGCGCCCCACACCACTATCCACTTTGAATCCTGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGCAGGATTCAAAGTaGATAGTGGTGTGGGGCGCT +
Preference number: 2 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEQDSK*IVVWGA
Trigger: AGCGCCCCACACCACTATCCACTTTGAATCCTGCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATACACCCAATGTATaGAGCAGGATTCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYTPNV*SRIQSG
Trigger: TCCACTTTGAATCCTGCTCCATACATTGGGTGTATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTTTCCTTTACCCCTaGATCCTAGCAGCTATGCGC +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSFLYP*ILAAMR
Trigger: GCGCATAGCTGCTAGGATTCAGGGGTAAAGGAAACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTAAAACAATGGAAATaGAATCTTAAGTGTCCGCTC +
Preference number: 2 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVKQWK*NLKCPL
Trigger: GAGCGGACACTTAAGATTGCATTTCCATTGTTTTAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTGTAATTCACAGTaGCACCAAGGAGTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLICNSQ*HQGVPL
Trigger: GAGGGGGACTCCTTGGTGGCACTGTGAATTACAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTGTAATTCACAGTaGCACCAAGGAGTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHICNSQ*HQGVPL
Trigger: GAGGGGGACTCCTTGGTGGCACTGTGAATTACAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGCAGGATTCAAAGTaGATAGTGGTGTGGGGCGCT +
Preference number: 2 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEQDSK*IVVWGA
Trigger: AGCGCCCCACACCACTATCCACTTTGAATCCTGCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTGTAATTCACAGTaGCACCAAGGAGTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIICNSQ*HQGVPL
Trigger: GAGGGGGACTCCTTGGTGGCACTGTGAATTACAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGCAGGATTCAAAGTaGATAGTGGTGTGGGGCGCT +
Preference number: 2 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEQDSK*IVVWGA
Trigger: AGCGCCCCACACCACTATCCACTTTGAATCCTGCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAAATATTTCATCTCTaGGCCCTATCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQIFHL*ALSVTG
Trigger: CCCTGTAACAGATAGGGCCCAGAGATGAAATATTTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAAATATTTCATCTCTaGGCCCTATCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQIFHL*ALSVTG
Trigger: CCCTGTAACAGATAGGGCCCAGAGATGAAATATTTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATACACCCAATGTATaGAGCAGGATTCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYTPNV*SRIQSG
Trigger: TCCACTTTGAATCCTGCTCCATACATTGGGTGTATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATACACCCAATGTATaGAGCAGGATTCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYTPNV*SRIQSG
Trigger: TCCACTTTGAATCCTGCTCCATACATTGGGTGTATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAAATATTTCATCTCTaGGCCCTATCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQIFHL*ALSVTG
Trigger: CCCTGTAACAGATAGGGCCCAGAGATGAAATATTTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAAATATTTCATCTCTaGGCCCTATCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQIFHL*ALSVTG
Trigger: CCCTGTAACAGATAGGGCCCAGAGATGAAATATTTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAAAACAATGGAAATaGAATCTTAAGTGTCCGCTC +
Preference number: 2 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVKQWK*NLKCPL
Trigger: GAGCGGACACTTAAGATTGCATTTCCATTGTTTTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTAAAACAATGGAAATaGAATCTTAAGTGTCCGCTC +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVKQWK*NLKCPL
Trigger: GAGCGGACACTTAAGATTGCATTTCCATTGTTTTAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATACACCCAATGTATaGAGCAGGATTCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYTPNV*SRIQSG
Trigger: TCCACTTTGAATCCTGCTCCATACATTGGGTGTATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTTGCTATATCATGTaGAAAAGCTATCTAGATGAG +
Preference number: 2 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLCYIM*KSYLDE
Trigger: CTCATCTAGATAGCTTTTGCACATGATATAGCAAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAAATATTTCATCTCTaGGCCCTATCTGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQIFHL*ALSVTG
Trigger: CCCTGTAACAGATAGGGCCCAGAGATGAAATATTTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTTGCTATATCATGTaGAAAAGCTATCTAGATGAG +
Preference number: 2 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILCYIM*KSYLDE
Trigger: CTCATCTAGATAGCTTTTGCACATGATATAGCAAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATACACCCAATGTATaGAGCAGGATTCAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYTPNV*SRIQSG
Trigger: TCCACTTTGAATCCTGCTCCATACATTGGGTGTATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATACACATTTGCGTCTaGACCTTTTGTTTTCCTCAA +
Preference number: 3 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIHICV*TFCFPQ
Trigger: TTGAGGAAAACAAAAGGTCAAGACGCAAATGTGTAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATACACATTTGCGTCTaGACCTTTTGTTTTCCTCAA +
Preference number: 3 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIHICV*TFCFPQ
Trigger: TTGAGGAAAACAAAAGGTCAAGACGCAAATGTGTAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
3UTR-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATACACATTTGCGTCTaGACCTTTTGTTTTCCTCAA +
Preference number: 3 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIHICV*TFCFPQ
Trigger: TTGAGGAAAACAAAAGGTCAAGACGCAAATGTGTAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCCTCGTCTGGAGCTaGCCTGGCCCCCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFALVWS*PGPRQH
Trigger: GTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCAGCTCTGCCTCTaGCCGGGCAAGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLQLCL*PGKGGC
Trigger: GCAGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCCAGCTGGGCAATaGCACGGTGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPAGQ*HGATAP
Trigger: AGGAGCGGTGGCACCGTGTCATTGCCCAGCTGGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPVRMP*AASFSC
Trigger: GCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTAACAGCCACACCTaGTGCCACCGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFANSHT*CHRAES
Trigger: GCTCTCTGCCCGGTGGCAGCAGGTGTGGCTGTTAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCCTCGTCTGGAGCTaGCCTGGCCCCCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGALVWS*PGPRQH
Trigger: GTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCCAGGGGCGGAGTTaGGACTCTGCAGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSQGRS*DSAAWK
Trigger: CTTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGACTGTCCTCCACTaGCTGCCAGCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFETVLH*LPAPPP
Trigger: CGGAGGAGGAGCTGGCAGCCAGTGGAGGACAGTCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCAGACAGCCAGGATaGCCTCTCCCATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGRQPG*PLPSPL
Trigger: CAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCCGCTGGCTGGGGTaGCTGGAGAAGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRWLG*LEKKAW
Trigger: CCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTGGTCCCGCTGGCTaGGGTGGCTGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLGPAG*GGWRRR
Trigger: CCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGGAGACAGGCTCCCTaGCCGCTCACTCCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRRQAP*PLTPVR
Trigger: TCTTACCGGAGTGAGCGGTCAGGGAGCCTGTCTCCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGTGCCCTTGGCGTTaGTTTCTCCCAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQCPWR*FLPAGL
Trigger: GAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCTGGAGAGTGTCCTaGTACTGCACAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAWRVS*YCTAAC
Trigger: GCAGGCTGCTGTGCAGTATCAGGACACTCTCCAGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTGCAGCGTGGACTaGAGCTGTTGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCCSVD*SCCSLS
Trigger: GGAGAGGGAGCAACAGCTGCAGTCCACGCTGCAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCGGGTGGGAGAAGCTaGCCGGGAAGATGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAGGRS*PGRWFG
Trigger: TCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCCTCGTCTGGAGCTaGCCTGGCCCCCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLALVWS*PGPRQH
Trigger: GTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCCTCGTCTGGAGCTaGCCTGGCCCCCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHALVWS*PGPRQH
Trigger: GTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGGTCTGTGCCCACTaGGGGCATGGTGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEVCAH*GHGAEL
Trigger: AAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCACTGTGGAAACCCTaGGCCTGCTGCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLWKP*ACCSVD
Trigger: GTCCACGCTGCAGCAGGCCCAGGGTTTCCACAGTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTTTGCCCGCTTCCTaGCGTCATCCAGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFALPAS*RHPVTD
Trigger: GTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGATGCAGTCGGGATaGCAGACAGCCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVMQSG*QTARMA
Trigger: GGCCATCCTGGCTGTCTGCCATCCCGACTGCATCAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCCGCTGGATTAGGGTaGTCTCAGCCCACTGGATCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPAGLG*SQPTGS
Trigger: GGATCCAGTGGGCTGAGACCACCCTAATCCAGCGGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTCTCACTCCGACATaGCCTCTCACTCCGACAGGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPLTPT*PLTPTG
Trigger: TCCTGTCGGAGTGAGAGGTCATGTCGGAGTGAGAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCACTGGCTGTCCTaGTTCCAGGTGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLHWLS*FQVCSI
Trigger: GATGCTGCACACCTGGAATCAGGACAGCCAGTGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIQVWL*CWVPEL
Trigger: CAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTCCAGGAAGGACTaGACTGACTGGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWSRKD*TDWVAT
Trigger: TGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGGCAAGAGCTGCCTaGAGTCTGTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLARAA*SLFMRS
Trigger: CGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTCTGAGCTGCTCATaGTCCACAGCTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCLSCS*STAGGG
Trigger: GCCTCCTCCAGCTGTGGATCATGAGCAGCTCAGACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATTCAGCTTCCGCTaGCGCTCCAGGGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFSFR*RSRANS
Trigger: GCTGTTAGCCCTGGAGCGTCAGCGGAAGCTGAATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATGGAGTCATCCCCTaGGATGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNGVIP*DAPSGR
Trigger: CCTGCCAGAAGGGGCATCTCAGGGGATGACTCCATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFDVRLE*KAGVGR
Trigger: GCGACCGACACCAGCTTTTCACTCCAGCCGAACATC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTACTTTCCCGAGCTaGATTGCTTCCGGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSTFPS*IASGGV
Trigger: CACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTTCACCTGCCGCTaGTTTAGGAAGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFTCR*FRKSRA
Trigger: CGCCCTGGACTTCCTAAAGCAGCGGCAGGTGAAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATGCGGCGGCGCTTaGCTGGAGATTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCGGA*LEISAV
Trigger: CACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAAGAGGAAATCATaGGGCGGCGCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLKRKS*GGACLE
Trigger: CTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTGCAAGCTGCTGTTaGAGGACTCCGGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVASCC*RTPGSE
Trigger: CTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGCTCTGCCAGTTTaGCCTGCAGCACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSALPV*PAALRL
Trigger: CAGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGTTGGTGCTGCTTTaGCCACGTCAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLVLL*PRQDLL
Trigger: GAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCCTCGTCTGGAGCTaGCCTGGCCCCCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIALVWS*PGPRQH
Trigger: GTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRVLSS*SCPFTH
Trigger: GTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPGKMV*IFDPVT
Trigger: GGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTGCCCGGGAAGATaGTTTGGATCTTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCPGR*FGSSTP
Trigger: CGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCACCAGCAAATAGCTaGGCTTCCAGCAGCCGGACA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPPANS*ASSSRT
Trigger: TGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGATGCCAAGACCCTaGGTCCTCTTTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEMPRP*VLFGPL
Trigger: GAGTGGGCCAAAGAGGACCCAGGGTCTTGGCATCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCAGCTCTGCCTCTaGCCGGGCAAGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLQLCL*PGKGGC
Trigger: GCAGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTCTCCACATGTGCTaGAGATTTCCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPLHMC*RFPHGD
Trigger: GTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLPAAV*AAHDPQ
Trigger: CTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTGCTGGACTTGCTaGAGATGGCCCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCWTC*RWPCTT
Trigger: TGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCACAATCATCCCTTaGTCGCCCACCCCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCTIIP*SPTPEL
Trigger: CAACTCAGGGGTGGGCGATCAAGGGATGATTGTGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCTGGAGATCCACCTaGAGCTGCCTGATGAGACCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIWRST*SCLMRP
Trigger: GGGTCTCATCAGGCAGCTGCAGGTGGATCTCCAGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLQCSF*LSHPVA
Trigger: TGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATCTCGTAGAGCCTaGGTCTGCTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSRRA*VCFSSA
Trigger: GGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGCCAGTTTGCCCTaGAGCACTGAGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSASLP*STEAEL
Trigger: CAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAGCGGCGCTTCTCTaGCTCATTCAGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGAALL*LIQHSL
Trigger: AAGGCTATGCTGAATGAGGCAGAGAAGCGCCGCTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTTCAAAGGACGGCTaGAGTTTCTCCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFASKDG*SFSSST
Trigger: CGTGGAGCTGGAGAAACTGCAGCCGTCCTTTGAAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCCGGACAGTGACTTaGCTGTCTATCAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRTVT*LSISPS
Trigger: GGAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCAAGCAGCCCAGCTaGCACAGCCTCCTTTACAGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVKQPS*HSLLYR
Trigger: TCTGTAAAGGAGGCTGTGGCAGCTGGGCTGCTTGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATCCCGTAGGATCTaGAGATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSRRI*RSTCSC
Trigger: GCAGCTGCAGGTGGATCTCCAGATCCTACGGGATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGGCTCAGCTTGGTCTaGTTCTCTTCCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGLSLV*FSSRNP
Trigger: AGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTACAGTCCAGGGCTaGCTCTCCTTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPTVQG*LSFNVQ
Trigger: CTGGACATTGAAGGAGAGCCAGCCCTGGACTGTAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRVTMS*VASKLL
Trigger: GAGCAGCTTGGAAGCCACCCATGACATGGTCACTCG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTGTTGGAAGCGCTaGCTCAGCTCTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCWKR*LSSASL
Trigger: CAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCGGACTCGACAGTaGAACTGCCCAATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRTRQ*NCPIPS
Trigger: AGAGGGGATTGGGCAGTTCCACTGTCGAGTCCGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSKAC*NWPRAK
Trigger: CTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTATGTTCTGAGGGATaGGCTCCTGATCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLCSEG*APDPAG
Trigger: TCCAGCGGGATCAGGAGCCCATCCCTCAGAACATAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCCCGGTTGGCTTTaGCACCTGTGGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLPGWL*HLWRLG
Trigger: CCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCTCTGGGCAGTTTaGTGCCTGAGAGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLWAV*CLRGPL
Trigger: TAGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGATCCAGGGAATGAGTaGGTCCACTCGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFDPGNE*VHSALV
Trigger: TACCAAAGCCGAGTGGACTCACTCATTCCCTGGATC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEVSQK*LQVSGI
Trigger: GATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCAATCCTCAATGTaGTGTCCTGCCTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLQSSM*CPAWHL
Trigger: GAGATGCCAGGCAGGACATCACATTGAGGATTGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTCCAGCTGGGCAATaGCACGGTGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPAGQ*HGATAP
Trigger: AGGAGCGGTGGCACCGTGTCATTGCCCAGCTGGAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGTGTGATGGCATCTaGAGAGGAAATCATGCGGCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLCDGI*RGNHAA
Trigger: CGCCGCATGATTTCCTCTTCAGATGCCATCACACAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPVRMP*AASFSC
Trigger: GCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGTACTGCTCACCAATaGGCAGTGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGTAHQ*AVRVLG
Trigger: GCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHPCSG*AQPSHL
Trigger: GAGATGAGAAGGCTGGGCTCAACCAGAACATGGATG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCAGATGGAGGCTTCTaGTTGGCTATGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFADGGF*LAMSSS
Trigger: TGAGGAGCTCATAGCCAATCAGAAGCCTCCATCTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTGCACCTGCAGCTaGGCAGTAGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFCTCS*AVVWSC
Trigger: ACAAGACCAGACTACTGCTCAGCTGCAGGTGCAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCCCAGAGGTGCTTaGGTTCTGTCAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPRGA*VLSVVL
Trigger: GAGAACCACTGACAGAACTCAAGCACCTCTGGGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCCACCTTACTGCTaGCCGCATGCCACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLPPYC*PHATSV
Trigger: AACAGAAGTGGCATGCGGTCAGCAGTAAGGTGGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQLWLL*LALELE
Trigger: CTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCACTTCAAAGGCCTaGTCCAGGTTCTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFATSKA*SRFSLL
Trigger: TAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGGTCTGCTGGCACTaGTTCCTCTTGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEVCWH*FLLTQL
Trigger: AAGCTGAGTCAAGAGGAAGCAGTGCCAGCAGACCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGCCGGAGCTGTTCTaGCACTTTCTTGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVPELF*HFLGLS
Trigger: ACTAAGGCCAAGAAAGTGGCAGAACAGCTCCGGCAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGTCCCACCCAGTTaGAAAGATCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPVPPS*KDPPAS
Trigger: AGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAGCQR*SGIADT
Trigger: AGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCGCTGGCTCAGCTCTaGCAGTTTGCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGALAQL*QFALQH
Trigger: GTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCGGAGTTGGGACTCTaGAGCCTGGAAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAELGL*SLEAGQ
Trigger: CTGGCCTGCTTCCAGGCTGCAGAGTCCCAACTCCGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACTCGACAGTGGAACTaGCCAATCCCCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTRQWN*PIPSSL
Trigger: CAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAACGTCAGCTCTAGCTaGTCCTGGCGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNVSSS*SWRTFP
Trigger: AGGGAAAGTTCGCCAGGAGCAGCTAGAGCTGACGTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGTTTTTGCCTGGCTaGTGCCTTGCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLFLPG*CLAEEI
Trigger: GATCTCCTCAGCAAGGCAGCAGCCAGGCAAAAACAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCCTCATCTCTTCCTaGTGCTGTCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCLISS*CCLSCS
Trigger: TGAGCAGCTCAGACAGCAGCAGGAAGAGATGAGGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCTTTGTTGACTGTTaGCACCGTGGCTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGFVDC*HRGLMS
Trigger: GCTCATCAAGCCACGGTGGCAACAGTCAACAAAGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCCCACTGGATCCATaGCAGAAGTTCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPLDP*QKFFQE
Trigger: CTCCTGGAAGAACTTCTGGCATGGATCCAGTGGGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTAACAGCCACACCTaGTGCCACCGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGANSHT*CHRAES
Trigger: GCTCTCTGCCCGGTGGCAGCAGGTGTGGCTGTTAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGCCCCCGGCAGCACTaGTCTCTGAAGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGPRQH*SLKCLS
Trigger: GCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCCTCGTCTGGAGCTaGCCTGGCCCCCGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNALVWS*PGPRQH
Trigger: GTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAGCAGGGAGCTCTTaGCAGAGGCTCCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRAGSS*QRLRPG
Trigger: ACCAGGGCGGAGCCTCTGGCAAGAGCTCCCTGCTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGGGAGGAGAGGGACTaGCCAATTTTAACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFREERD*PILTAW
Trigger: CCAGGCAGTTAAAATTGGGCAGTCCCTCTCCTCCCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAGCGCAGAGTTGTaGCACTTGAACCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLSAEL*HLNLME
Trigger: CTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGAGAGGCTCCGCCCTaGTGCCTCTCCAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGREAPP*CLSSAL
Trigger: AAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACCCGTGTCCGTTCCTaGAGAACCTCATATTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTRVRS*RTSYCS
Trigger: GGAGCAATATGAGGTTCTCCAGGAACGGACACGGGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCCAGGGGCGGAGTTaGGACTCTGCAGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSQGRS*DSAAWK
Trigger: CTTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGACTGTCCTCCACTaGCTGCCAGCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGETVLH*LPAPPP
Trigger: CGGAGGAGGAGCTGGCAGCCAGTGGAGGACAGTCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTCATGATCCACAGCTaGAGGAGGCAGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLMIHS*RRQLCY
Trigger: ATAGCACAGCTGCCTCCTCCAGCTGTGGATCATGAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRARAR*RTSSFI
Trigger: AATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCCTCAGCCAACTGTaGCTCCACCTTGTACAACCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVLSQL*LHLVQP
Trigger: TGGTTGTACAAGGTGGAGCCACAGTTGGCTGAGGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGGTCTCAGCCCACTaGATCCATGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVVSAH*IHARSS
Trigger: AGAACTTCTGGCATGGATCCAGTGGGCTGAGACCAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCCGCTGGCTGGGGTaGCTGGAGAAGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSRWLG*LEKKAW
Trigger: CCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTGGTCCCGCTGGCTaGGGTGGCTGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLGPAG*GGWRRR
Trigger: CCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGCCCACCCCTGAGTTaGGAGCTGAGTCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRPPLS*ELSLRA
Trigger: TGCCCGGAGACTCAGCTCCCAACTCAGGGGTGGGCG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGAAGCAGGCATTATaGGACCCTTGCAGGACACGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEKQAL*DPCRTR
Trigger: TCGTGTCCTGCAAGGGTCCCATAATGCCTGCTTCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGTCTTGGTCCCGCTaGCTGGGGTGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGESWSR*LGWLEK
Trigger: CTTCTCCAGCCACCCCAGCCAGCGGGACCAAGACTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGGAGACAGGCTCCCTaGCCGCTCACTCCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRRQAP*PLTPVR
Trigger: TCTTACCGGAGTGAGCGGTCAGGGAGCCTGTCTCCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTCCAGCTGGGCAATaGCACGGTGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSPAGQ*HGATAP
Trigger: AGGAGCGGTGGCACCGTGTCATTGCCCAGCTGGAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGGTGTGAGATTGTaGCTGTGTTGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSGVRL*LCWSRK
Trigger: CTTCCTGGACCAACACAGTCACAATCTCACACCTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCAGCTCTGCCTCTaGCCGGGCAAGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILQLCL*PGKGGC
Trigger: GCAGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCAGCTCTGCCTCTaGCCGGGCAAGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLQLCL*PGKGGC
Trigger: GCAGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPRLLG*LLMRVM
Trigger: CATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGTGCCCTTGGCGTTaGTTTCTCCCAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQCPWR*FLPAGL
Trigger: GAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCTGAAGACAGTCTaGAGGCTTTCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLKTV*RLSCRS
Trigger: AGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPPPFC*RQSEGF
Trigger: AAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPVRMP*AASFSC
Trigger: GCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPVRMP*AASFSC
Trigger: GCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGGGTGCTGATGGCTaGCTGGCCACTCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLGADG*LATQSL
Trigger: CAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGTTACTACAGGCTTaGGAGCCCAGGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLLQA*EPRASK
Trigger: CTTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTGCAACCTCAGCTTaGTGTACAAGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCATSA*CTSGEA
Trigger: TGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCCAGCTGCCCAGTaGTTTTCTCTCTATCAGCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPAAQ*FSLYQP
Trigger: TGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCTGGAGAGTGTCCTaGTACTGCACAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAWRVS*YCTAAC
Trigger: GCAGGCTGCTGTGCAGTATCAGGACACTCTCCAGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTTCTGAGTCCAGATaGCTCTCTGCGTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSESR*LSASSS
Trigger: GCTAGAAGACGCAGAGAGTCATCTGGACTCAGAACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAAATCTCCAGTTCTaGGTCCAGATGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGNLQF*VQMTLC
Trigger: GCAGAGAGTCATCTGGACTCAGAACTGGAGATTTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGATCGTTTCAGGACCTaGACTGTGCCGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFDRFRT*TVPVLF
Trigger: AAAGAGAACCGGCACAGTTCAGGTCCTGAAACGATC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAAATCACAAGATTCTaGGCAGGGATGCGTCACCGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQITRF*AGMRHR
Trigger: TCGGTGACGCATCCCTGCTCAGAATCTTGTGATTTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATGCCTTCAACAGCTaGGCAGGAACTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNAFNS*AGTSCG
Trigger: GCCACAAGAAGTTCCTGCTCAGCTGTTGAAGGCATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGGCTCTCAGATCTTaGAGTTTGCCTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQALRS*SLPCSS
Trigger: GGAACTGCAAGGCAAACTTCAAGATCTGAGAGCCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCAGAGTCTTGACCTaGACTTCTTGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCRVLT*TSCWTC
Trigger: GCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAAGCTTCCTCCCTGTaGGATGCTTCTGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKASSL*DASGVR
Trigger: CCTTACTCCAGAAGCATCTCACAGGGAGGAAGCTTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTCGCTGTTTGCATaGCGCCAGGAGGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSLFA*RQEGML
Trigger: GAGCATGCCCTCCTGGCGTCATGCAAACAGCGAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGGCTTTGGTATTCTTaGCATCTGGAGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRLWYS*HLESTS
Trigger: GGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCFIH*NWDWTA
Trigger: TGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGACTGTTCCACCCTaGTGGCCATTTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKTVPP*WPFQWP
Trigger: AGGCCATTGAAATGGCCAGCAGGGTGGAACAGTCTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAATCCTCCTGTGTGTaGTCCTGCTCTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKSSCV*SCSAIL
Trigger: GAGGATTGCAGAGCAGGAGCACACACAGGAGGATTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCCAGCTCTGTCGCTaGTTTACTCTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCQLCR*FTLLCL
Trigger: GAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQAPEN*SIPGRL
Trigger: TAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACTGGCCTAGCAACATaGTCAGATGAGAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTGLAT*SDESPI
Trigger: GATTGGGCTCTCATCTGAGCATGTTGCTAGGCCAGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCAACACCCAGGCCTaGAGGCTGTCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVNTQA*RLSALL
Trigger: GAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCAACACCCAGGCCTaGAGGCTGTCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVNTQA*RLSALL
Trigger: GAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCGCTGGCTCAGCTCTaGCAGTTTGCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLALAQL*QFALQH
Trigger: GTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGCTCTCCTTTTCTTaGTGCTGGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLSFS*CWSWSC
Trigger: ACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGGAATTCATCCAACTaGTCCTGGCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRNSSN*SWQVDA
Trigger: TGCATCCACTTGCCAGGAGCAGTTGGATGAATTCCG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCGGAGTTGGGACTCTaGAGCCTGGAAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAELGL*SLEAGQ
Trigger: CTGGCCTGCTTCCAGGCTGCAGAGTCCCAACTCCGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTGCTCATGCTGCTaGCTTCGTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCSCC*LRASNS
Trigger: GGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCQWLP*HLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGACTGGGCTATTCTaGCTCCTTCTGCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLTGLF*LLLLEA
Trigger: TGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNLVAS*RACSKV
Trigger: AACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACTCGGTTTTCTCCTaGAGTACAGCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHSVFS*STAFCS
Trigger: GGAGCAGAAAGCTGTACTGCAGGAGAAAACCGAGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLSAP*DLPMSS
Trigger: GGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGTGGTCAGGAGAGCTaGCATGTCATACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGGQES*HVIPEL
Trigger: AAGTTCTGGTATGACATGGCAGCTCTCCTGACCACC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTACTGCACAGCAGCCTaGATGGCATCCTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYCTAA*MASSSF
Trigger: AAAACTCGAGGATGCCATGCAGGCTGCTGTGCAGTA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTACTGCTGACCGCATaGCACTTCTGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLLTA*HFCSKS
Trigger: GCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATTCTGGAATTCTGTTaGCAGGCTGAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFILEFC*QAEGLF
Trigger: GAAGAGGCCCTCAGCCTGGCAACAGAATTCCAGAAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLSIDR*TTFSHR
Trigger: TCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGGACCTGAACTGTaGCGGTTCTCTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSGPEL*RFSFPV
Trigger: AACTGGGAAAGAGAACCGGCACAGTTCAGGTCCTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWCHLC*PQSVLC
Trigger: GCAGAGAACTGATTGAGGGCAGCAGAGATGACACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCTGTTTTAAGGCTTaGTCAAGCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFACFKA*SSRLCL
Trigger: CAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTAACAGCCACACCTaGTGCCACCGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLANSHT*CHRAES
Trigger: GCTCTCTGCCCGGTGGCAGCAGGTGTGGCTGTTAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCGGGTGGGAGAAGCTaGCCGGGAAGATGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAGGRS*PGRWFG
Trigger: TCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCCCCCGGCAGCACTaGTCTCTGAAGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGPRQH*SLKCLS
Trigger: GCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCCCCCGGCAGCACTaGTCTCTGAAGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGPRQH*SLKCLS
Trigger: GCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGGCTCCGCCCTGGTaGCTCTCCAGTGTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEAPPW*LSSVFL
Trigger: CAGAAAGACACTGGAGAGGCACCAGGGCGGAGCCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACAGCACAGCCCTGCTaGTGCAGGATGCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTAQPC*CRMLSS
Trigger: CGAGGACAGCATCCTGCAGCAGCAGGGCTGTGCTGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCGCAGCCCATCGCTaGCATAGCCAGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGAAHR*HSQRRM
Trigger: CATCCTCCTCTGGCTATGGCAGCGATGGGCTGCGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFESTRL*YSCHLE
Trigger: CTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCGGTAGTCACAGATaGCCTTCACAGATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAGSHR*PSQIKC
Trigger: GCACTTTATCTGTGAAGGCCATCTGTGACTACCGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGTTAATGTGTAGCTaGTGCCAAAGGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVLMCS*CQRAIT
Trigger: GGTGATGGCCCTTTGGCACCAGCTACACATTAACAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCAGGTGCTGGAAGTaGGCTTTACAAGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIRCWK*ALQAST
Trigger: GGTGGAAGCTTGTAAAGCCCACTTCCAGCACCTGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCATCTCTGTCAGTCTTaGAGCTGGCTGGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHLCQS*SWLETE
Trigger: TTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTACTATCCTCTGCCTaGCCAGGCTTCATCATTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLSSA*PGFIIS
Trigger: GGAAATGATGAAGCCTGGCCAGGCAGAGGATAGTAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGCTGCTCCAAAATaGCCTTCTCAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPAAPK*PSQCLQ
Trigger: CTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCGCTTTGGAGCTGCTaGAGTTGGTTTGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLWSC*SWFAEP
Trigger: TGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGAGAGGCTCCGCCCTaGTGCCTCTCCAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLREAPP*CLSSAL
Trigger: AAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAGCTGTCAGCTCCTaGGGGCTCAGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRAVSS*GLSLVW
Trigger: CCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTCAACTTCCCTTATaGACTGCAGCAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVQLPL*TAAGSP
Trigger: TGGAGAGCCTGCTGCAGTCCATAAGGGAAGTTGAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTTTTCTTGCTGCTaGAGCTGGAGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFSCC*SWSCWK
Trigger: CTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAAACATCTCAGCCTaGGGCAGGAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSNISA*GRSFFR
Trigger: CCTAAAGAAGCTCCTGCCCCAGGCTGAGATGTTTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCCAGGGGCGGAGTTaGGACTCTGCAGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSQGRS*DSAAWK
Trigger: CTTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGGCATCCATGTTCTaGTTGAGCCCAGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMASMF*LSPAFS
Trigger: TGAGAAGGCTGGGCTCAACCAGAACATGGATGCCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSIRSI*SIFYES
Trigger: GGACTCGTAGAAGATGCTCCAGATGGATCGGATGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSYVE*NLVASC
Trigger: GCAGCTGGCCACCAAGTTCCACTCTACATATGAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCATCAGCTTCCGCTTaGTTTCAGCAACCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPSASA*FQQPKL
Trigger: TAGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCACTGTGGAAACCCTaGGCCTGCTGCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLWKP*ACCSVD
Trigger: GTCCACGCTGCAGCAGGCCCAGGGTTTCCACAGTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTCAATTTCACTGTaGAAACCCTGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSISL*KPWACC
Trigger: GCAGCAGGCCCAGGGTTTCCACAGTGAAATTGAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTTTGCCCGCTTCCTaGCGTCATCCAGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGALPAS*RHPVTD
Trigger: GTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACTCCAACAGCATATaGACCGTGTCCCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHSNSI*TVSRNS
Trigger: AGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCAGACAGCCAGGATaGCCTCTCCCATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGRQPG*PLPSPL
Trigger: CAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCAGACAGCCAGGATaGCCTCTCCCATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGRQPG*PLPSPL
Trigger: CAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGATGCAGTCGGGATaGCAGACAGCCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVMQSG*QTARMA
Trigger: GGCCATCCTGGCTGTCTGCCATCCCGACTGCATCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCCGCTGGATTAGGGTaGTCTCAGCCCACTGGATCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPAGLG*SQPTGS
Trigger: GGATCCAGTGGGCTGAGACCACCCTAATCCAGCGGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTATCTTCCCATCCTaGTCCTTGTCAATACGCCGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVIFPS*SLSIRR
Trigger: CCGGCGTATTGACAAGGACCAGGATGGGAAGATAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCCGCTGGCTGGGGTaGCTGGAGAAGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRWLG*LEKKAW
Trigger: CCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCCGCTGGCTGGGGTaGCTGGAGAAGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSRWLG*LEKKAW
Trigger: CCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTGGTCCCGCTGGCTaGGGTGGCTGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLGPAG*GGWRRR
Trigger: CCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGCCCGGTTGGCTTTaGCACCTGTGGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLPGWL*HLWRLG
Trigger: CCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCCCGGTTGGCTTTaGCACCTGTGGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILPGWL*HLWRLG
Trigger: CCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGTCTGGAGCTGCCCTaGCCCCCGGCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRLELP*PPAALL
Trigger: GAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAAGACTCACAGGTCTaGGAGTCAAAGAAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKDSQV*ESKKPR
Trigger: TCGGGGCTTCTTTGACTCCCAGACCTGTGAGTCTTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACAGAGCACAGAGAGTaGGTCCTGGGGTCTAAGATA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTEHRE*VLGSKI
Trigger: TATCTTAGACCCCAGGACCCACTCTCTGTGCTCTGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGCACTGTCCTTGTaGGCAGTTTCTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSALSL*AVSPEE
Trigger: TTCTTCCGGAGAAACTGCCCACAAGGACAGTGCAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTCTGCAAGGCTCTaGGTTTACACCTTCAATCCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCSARL*VYTFNP
Trigger: GGGATTGAAGGTGTAAACCCAGAGCCTTGCAGAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCTGGATCTCTGCTTaGAAGCTCTCCTTTACCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVWISA*KLSFTC
Trigger: GCAGGTAAAGGAGAGCTTCCAAGCAGAGATCCAGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGTCTTGGTCCCGCTaGCTGGGGTGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHESWSR*LGWLEK
Trigger: CTTCTCCAGCCACCCCAGCCAGCGGGACCAAGACTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCACTGGCTGTCCTaGTTCCAGGTGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLHWLS*FQVCSI
Trigger: GATGCTGCACACCTGGAATCAGGACAGCCAGTGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGGTAGAAGAAGAATaGGTCGTCTTGTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEVEEE*VVLFRG
Trigger: ACCCCTGAACAAGACGACTCATTCTTCTTCTACCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIQVWL*CWVPEL
Trigger: CAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTCCAGCTGGGCAATaGCACGGTGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISPAGQ*HGATAP
Trigger: AGGAGCGGTGGCACCGTGTCATTGCCCAGCTGGAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCCAGCTGGGCAATaGCACGGTGCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSPAGQ*HGATAP
Trigger: AGGAGCGGTGGCACCGTGTCATTGCCCAGCTGGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGACAGCAGTGGCAAATaGGGTGGAATGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFDSSGK*GGMTLN
Trigger: ATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTLQCL*QQWQMR
Trigger: CCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWFTST*PSVAAK
Trigger: CTTAGCTGCCACTGATGGTCATGTAGATGTGAACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGTCCAGGAAGGACTaGACTGACTGGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWSRKD*TDWVAT
Trigger: TGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTCCTTTGTGGGAAATaGCATCCTCAGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLCGK*HPQRSF
Trigger: GAAGCTTCTCTGAGGATGTCATTTCCCACAAAGGAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGAGTGATGCCACCTaGTCCCTTTCTAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFESDAT*SLSRFC
Trigger: ACAAAACCTAGAAAGGGATCAGGTGGCATCACTCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGFCFP*TAAACW
Trigger: CCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGTGCCCTTGGCGTTaGTTTCTCCCAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQCPWR*FLPAGL
Trigger: GAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPVRMP*AASFSC
Trigger: GCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTCAACCCACTTCTaGCTGATGCTTTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSTHF*LMLCRS
Trigger: AGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCAGGTTGGGTGCTaGTGGCTGACTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLQVGC*WLTGHS
Trigger: TGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGGCAAGAGCTGCCTaGAGTCTGTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLARAA*SLFMRS
Trigger: CGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTGCAATTTCACCTaGAGAGGATCCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCCNFT*RGSTWS
Trigger: AGACCAAGTGGATCCTCTTCAGGTGAAATTGCAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATCTGTCAACCAGCTaGGCAAAGGCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYLSTS*AKALRH
Trigger: ATGCCTTAGAGCCTTTGCTCAGCTGGTTGACAGATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTTCTGTCTTTGCTaGAACTGGGGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFCLC*NWGICS
Trigger: GGAGCAAATACCCCAGTTTCAGCAAAGACAGAAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCCAACAGTGTCACTaGTCAGTTTGTACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVQQCH*SVCTAR
Trigger: ACGAGCAGTACAAACTGATCAGTGACACTGTTGGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCTCGTACTGTTGTaGTCTCTGAATAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLVLL*SLNSSI
Trigger: GATGCTGCTATTCAGAGATCACAACAGTACGAGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTCCCCACGGTGACTaGAGAGCTCATCCATTGAAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFPHGD*RAHPLN
Trigger: ATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCTGGAGAGTGTCCTaGTACTGCACAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAWRVS*YCTAAC
Trigger: GCAGGCTGCTGTGCAGTATCAGGACACTCTCCAGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCTGGAGAGTGTCCTaGTACTGCACAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAWRVS*YCTAAC
Trigger: GCAGGCTGCTGTGCAGTATCAGGACACTCTCCAGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGCTCTGCCAGTTCTaGTTGTGGTATCATACACAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVLCQF*LWYHTQ
Trigger: CTGTGTATGATACCACAATCAGAACTGGCAGAGCAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPAKHP*TGLKTV
Trigger: TACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATCAGTTCTCTGCCTaGTCGTTTCAGGACCTGAAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNQFSA*SFQDLN
Trigger: GTTCAGGTCCTGAAACGATCAGGCAGAGAACTGATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTATATGTCTTGGTaGCCCTGTCCACGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSYMSW*PCPRQV
Trigger: AACCTGACGTGGACAGGGTCACCAAGACATATAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATTCAGCTTCCGCTaGCGCTCCAGGGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSFSFR*RSRANS
Trigger: GCTGTTAGCCCTGGAGCGTCAGCGGAAGCTGAATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCATCGATAAACTCCTaGCGTGTTATCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPSINS*RVIFPS
Trigger: GGATGGGAAGATAACACGTCAGGAGTTTATCGATGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATGGAGTCATCCCCTaGGATGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNGVIP*DAPSGR
Trigger: CCTGCCAGAAGGGGCATCTCAGGGGATGACTCCATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTTTTGCATGGCTCTaGAGATGGGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPFAWL*RWGISP
Trigger: TGGAGATATTCCCCATCTTCAGAGCCATGCAAAAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCTTCCATCTCTACTaGAATCTTCCTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAFHLY*NLPALF
Trigger: GAAAAGGGCAGGAAGATTTCAGTAGAGATGGAAGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGAGTAAACACATTCTaGGTTGCTCTGCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRVNTF*VALQGS
Trigger: AGAGCCTTGCAGAGCAACTCAGAATGTGTTTACTCG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTCGCTGTTTGCATaGCGCCAGGAGGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSLFA*RQEGML
Trigger: GAGCATGCCCTCCTGGCGTCATGCAAACAGCGAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGCTTCTTCTGCTCATaGAGTGGCAGGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRFFCS*SGRFQG
Trigger: GCCCTGGAACCTGCCACTGCATGAGCAGAAGAAGCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGACCACGGCACGTTCTaGAGGGTCCAGCACAGAATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDHGTF*RVQHRI
Trigger: GATTCTGTGCTGGACCCTGCAGAACGTGCCGTGGTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTTCACCTGCCGCTaGTTTAGGAAGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSFTCR*FRKSRA
Trigger: CGCCCTGGACTTCCTAAAGCAGCGGCAGGTGAAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTGCAGCATCAGCCTaGAGTGTGTTCTTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCAASA*SVFLAS
Trigger: ACTAGCTAAGAACACACTGCAGGCTGATGCTGCACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGCTCCAGTTTCATCTaGATCTCTTCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSSFI*ISSTQE
Trigger: CTCTTGGGTAGAAGAGATGCAGATGAAACTGGAGCG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCACATGGTCTGGATTaGGTGGCTTTAGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAHGLD*VALAEQ
Trigger: TTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTGTGCTCCTGCTCTaGAATCCTCAATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCVLLL*NPQCDV
Trigger: GACATCACATTGAGGATTGCAGAGCAGGAGCACACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAACCTGATGGAGACTaGTGGAGAAAGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEPDGD*WRKTLH
Trigger: ATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGAAGAGGAAATCATaGGGCGGCGCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLKRKS*GGACLE
Trigger: CTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFELQDC*LPYAYY
Trigger: ATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCAACACCCAGGCCTaGAGGCTGTCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVNTQA*RLSALL
Trigger: GAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCAACACCCAGGCCTaGAGGCTGTCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVNTQA*RLSALL
Trigger: GAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLRLSN*LLQQSR
Trigger: TCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGCTCTGCCAGTTTaGCCTGCAGCACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSALPV*PAALRL
Trigger: CAGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCGCTGGCTCAGCTCTaGCAGTTTGCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIALAQL*QFALQH
Trigger: GTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCGCTGGCTCAGCTCTaGCAGTTTGCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSALAQL*QFALQH
Trigger: GTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTCCATGAACTGCTaGAGCTTGTTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSMNC*SLLESC
Trigger: GCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGTATCCGTTTACACTaGCTACAGAGCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGIRLH*LQSFLQ
Trigger: CTGTAGGAAGCTCTGTAGGCAGTGTAAACGGATACC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCGGAGTTGGGACTCTaGAGCCTGGAAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAELGL*SLEAGQ
Trigger: CTGGCCTGCTTCCAGGCTGCAGAGTCCCAACTCCGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCATAAACTGGACCTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSINWT*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCAGCTGCTCATGCTaGTGCCTTCGTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSCSC*CLRASN
Trigger: ATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGGACCCGTTAGGATaGCCTGAGCTGCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQDPLG*PELPRS
Trigger: TGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATCCTTGAGGTACTaGTCACCAATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSLRY*SPMSSE
Trigger: CTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWSGSY*SLFASL
Trigger: AAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGGATTCCCTTAGTTaGCTCATCTCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMDSLS*LISSCC
Trigger: GCAGCAGGAAGAGATGAGGCAACTAAGGGAATCCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRFSQR*LSSVSG
Trigger: ACCACTGACAGAACTCAAGCACCTCTGGGAGAATCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCTGCAGCGTGGACTaGAGCTGTTGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCCSVD*SCCSLS
Trigger: GGAGAGGGAGCAACAGCTGCAGTCCACGCTGCAGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCGCTCTACAGACTTaGCACAGACAGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVALQT*HRQYPI
Trigger: AATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSSWS*PFTHVV
Trigger: CACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGATGGTGATCCAGTaGTTGATGGTCGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMMVIQ*LMVVMQ
Trigger: CTGCATCACGACCATCAAGCACTGGATCACCATCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTAACAGCCACACCTaGTGCCACCGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSANSHT*CHRAES
Trigger: GCTCTCTGCCCGGTGGCAGCAGGTGTGGCTGTTAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTAACAGCCACACCTaGTGCCACCGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIANSHT*CHRAES
Trigger: GCTCTCTGCCCGGTGGCAGCAGGTGTGGCTGTTAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCGGGTGGGAGAAGCTaGCCGGGAAGATGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAGGRS*PGRWFG
Trigger: TCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCGGGTGGGAGAAGCTaGCCGGGAAGATGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAGGRS*PGRWFG
Trigger: TCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCCCCCGGCAGCACTaGTCTCTGAAGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGPRQH*SLKCLS
Trigger: GCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATCACCCCAGCAACTaGTCTGCAACCCTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNHPSN*SATLLF
Trigger: GAACAAAAGGGTTGCAGAGCAGTTGCTGGGGTGATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGATGATACATCTCTaGATCAGGTCCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWMIHL*IRSSKP
Trigger: TGGCTTGCTGGACCTGATGCAGAGATGTATCATCCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTCAGAAAGAACTGCTaGTTCCCTGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLRKNC*FPAHLD
Trigger: GTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACGCCAGGAGGGCATaGTCACGAGACGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDARRA*SRDEGS
Trigger: AGACCCTTCGTCTCGTGAGCATGCCCTCCTGGCGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCATCCATTGCAACTaGGACTGGACAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFIHCN*DWTAAL
Trigger: TAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPDGDC*RKTLHF
Trigger: GAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGAGCTGCTGGAGTTaGTTTGCAGAACCATCACAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWSCWS*FAEPSQ
Trigger: TTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGAGAGGCTCCGCCCTaGTGCCTCTCCAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIREAPP*CLSSAL
Trigger: AAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGAGAGGCTCCGCCCTaGTGCCTCTCCAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSREAPP*CLSSAL
Trigger: AAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGGGGGCTCAGCTTaGTCTGGTTCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPGGSA*SGSLPG
Trigger: TCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGAGCTGTCAGCTCCTaGGGGCTCAGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRAVSS*GLSLVW
Trigger: CCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGAGCTGTCAGCTCCTaGGGGCTCAGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRAVSS*GLSLVW
Trigger: CCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACTGCTGCAGCTTGTTaGAGAGCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTAAAC*RAAQTS
Trigger: AGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATCCAACTGCTCCTaGCAAGTGGATGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSNCS*QVDASF
Trigger: GAAAGATGCATCCACTTGCCAGGAGCAGTTGGATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAACCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEPVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTATGGAACCTGTTTTaGCTTGGGAATCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVWNLF*LGNQEL
Trigger: CAGCTCCTGATTCCCAAGCCAAAACAGGTTCCATAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTTGGAGACAAAGTaGCATCCATGGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWLETK*HPWLSG
Trigger: TCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCCAGGGGCGGAGTTaGGACTCTGCAGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISQGRS*DSAAWK
Trigger: CTTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCCAGGGGCGGAGTTaGGACTCTGCAGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSQGRS*DSAAWK
Trigger: CTTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATAGCTTGGTCAATTTaGCTGGAACGGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIAWSI*LERELS
Trigger: GCTCAACTCCCGTTCCAGCCAAATTGACCAAGCTAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGGTCTTCTAAGCCTTaGAGCGGCAGGGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRSSKP*SGRATV
Trigger: GACAGTCGCCCTGCCGCTCCAAGGCTTAGAAGACCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTAGCTTGTTTTCCATaGTCAGGCAGCTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLACFP*SGSYCS
Trigger: TGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATCTAGGAGTCGCTaGAGCAACTTCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSRSR*SNFCSW
Trigger: CCAAGAACAGAAGTTGCTCCAGCGACTCCTAGATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGSAVS*NCLART
Trigger: GGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGCTGGTGTATTTTaGCAGTCTGAGTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSAGVF*QSECQQ
Trigger: CTGTTGGCACTCAGACTGCCAAAATACACCAGCAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGACTGTCCTCCACTaGCTGCCAGCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIETVLH*LPAPPP
Trigger: CGGAGGAGGAGCTGGCAGCCAGTGGAGGACAGTCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGACTGTCCTCCACTaGCTGCCAGCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSETVLH*LPAPPP
Trigger: CGGAGGAGGAGCTGGCAGCCAGTGGAGGACAGTCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGGTCTGTGCCCACTaGGGGCATGGTGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEVCAH*GHGAEL
Trigger: AAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGGTCTGTGCCCACTaGGGGCATGGTGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEVCAH*GHGAEL
Trigger: AAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCACTGTGGAAACCCTaGGCCTGCTGCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLWKP*ACCSVD
Trigger: GTCCACGCTGCAGCAGGCCCAGGGTTTCCACAGTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCACTGTGGAAACCCTaGGCCTGCTGCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLWKP*ACCSVD
Trigger: GTCCACGCTGCAGCAGGCCCAGGGTTTCCACAGTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTTTGCCCGCTTCCTaGCGTCATCCAGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHALPAS*RHPVTD
Trigger: GTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPCTG*SSANCG
Trigger: GCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCCCTTTACCCACGTaGTGTCATCTCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAPLPT*CHLCCP
Trigger: AGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRVLSS*SCPFTH
Trigger: GTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCAGACAGCCAGGATaGCCTCTCCCATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGRQPG*PLPSPL
Trigger: CAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCAGACAGCCAGGATaGCCTCTCCCATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGRQPG*PLPSPL
Trigger: CAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCGCTGGATTAGGGTaGTCTCAGCCCACTGGATCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPAGLG*SQPTGS
Trigger: GGATCCAGTGGGCTGAGACCACCCTAATCCAGCGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPGKMV*IFDPVT
Trigger: GGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTGCCCGGGAAGATaGTTTGGATCTTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSCPGR*FGSSTP
Trigger: CGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGGAGAAGAAGGCATaGATGTACAGCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLEKKA*MYSCGY
Trigger: GTAACCACAGCTGTACATCCATGCCTTCTTCTCCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCCGCTGGCTGGGGTaGCTGGAGAAGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISRWLG*LEKKAW
Trigger: CCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTGGTCCCGCTGGCTaGGGTGGCTGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILGPAG*GGWRRR
Trigger: CCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAGACATGATAATCTaGGATTCCAGGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPDMII*DSRSTR
Trigger: CCTTGTGCTCCTGGAATCCCAGATTATCATGTCTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGCCATGTCTCCTTTaGAAATGTGGGGTACATCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQPCLL*KCGVHL
Trigger: CAGATGTACCCCACATTTCCAAAGGAGACATGGCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAAATTCCACCAGTTaGCTCACAGACTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGNSTS*LTDFSQ
Trigger: CTGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCTGAGAAGGGTGTaGAGGTCTTTTCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLRRV*RSFQVL
Trigger: CAGAACCTGAAAAGACCTCCACACCCTTCTCAGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCATAGAGATCATTaGTGTGCTTGCGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLHRDH*CACGPS
Trigger: TGAAGGTCCGCAAGCACATCAATGATCTCTATGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGGATTGCCATCTGTaGTGTCATCATTGCGGATAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWDCHL*CHHCGY
Trigger: ATATCCGCAATGATGACATCACAGATGGCAATCCCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAAAGTTGGTGCATTTaGCTCCTGTGTAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKSWCI*LLCNQL
Trigger: CAGCTGGTTACACAGGAGTCAAATGCACCAACTTTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGCACTGGCTGTCCTaGTTCCAGGTGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLHWLS*FQVCSI
Trigger: GATGCTGCACACCTGGAATCAGGACAGCCAGTGCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGCACTGGCTGTCCTaGTTCCAGGTGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLHWLS*FQVCSI
Trigger: GATGCTGCACACCTGGAATCAGGACAGCCAGTGCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATCCATGGAGTCCTaGAGCAGATCCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSMES*SRSSRR
Trigger: CCGCCTGGAGGATCTGCTTCAGGACTCCATGGATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATTCGGTGGGGGAATaGGAAAGCAAACTGATGGAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYSVGE*ESKLME
Trigger: TTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIQVWL*CWVPEL
Trigger: CAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCGGAGAGCATCACTaGTATATTTTACATGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAGEHH*YILHAE
Trigger: CTCAGCATGTAAAATATATCAGTGATGCTCTCCGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCCTTCTCTCCTTCTaGAAGCTTATGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFLLSF*KLMAML
Trigger: AAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGTCCAGGAAGGACTaGACTGACTGGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWSRKD*TDWVAT
Trigger: TGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGTCCAGGAAGGACTaGACTGACTGGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWSRKD*TDWVAT
Trigger: TGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCAGCTCTGCCTCTaGCCGGGCAAGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLQLCL*PGKGGC
Trigger: GCAGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRGNCV*EKLPHA
Trigger: AGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFESVVS*IGLQSR
Trigger: CCTGGACTGTAGGCCTATTCAAGAAACTACAGATTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGTGCCCTTGGCGTTaGTTTCTCCCAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQCPWR*FLPAGL
Trigger: GAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGTGCCCTTGGCGTTaGTTTCTCCCAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQCPWR*FLPAGL
Trigger: GAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTCCCATCGGGAATTaGGGTCCTCTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFPIGN*GPLAFS
Trigger: AGAAAATGCAAGAGGACCTCAATTCCCGATGGGAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGGGTGCTGATGGCTaGCTGGCCACTCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILGADG*LATQSL
Trigger: CAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCAGGTTGGGTGCTaGTGGCTGACTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLQVGC*WLTGHS
Trigger: TGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGGCAAGAGCTGCCTaGAGTCTGTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLARAA*SLFMRS
Trigger: CGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTCCTGGAACTCCTTaGGCCTCTGAGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFPGTP*ASESFL
Trigger: AAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCCTCCTTCTGCTTaGAGCATATCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLPPSA*SISTVA
Trigger: GGCCACAGTGGATATGCTTCAAGCAGAAGGAGGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGCTGCTGCCTTGCTaGGGAGATCAGTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWLLPC*GDQSIY
Trigger: GTAGATGGACTGATCTCCTCAGCAAGGCAGCAGCCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTCTCCACATGTGCTaGAGATTTCCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPLHMC*RFPHGD
Trigger: GTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTCTGAGCTGCTCATaGTCCACAGCTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCLSCS*STAGGG
Trigger: GCCTCCTCCAGCTGTGGATCATGAGCAGCTCAGACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTCTGAGCTGCTCATaGTCCACAGCTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCLSCS*STAGGG
Trigger: GCCTCCTCCAGCTGTGGATCATGAGCAGCTCAGACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLPAAV*AAHDPQ
Trigger: CTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCTGGAGAGTGTCCTaGTACTGCACAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAWRVS*YCTAAC
Trigger: GCAGGCTGCTGTGCAGTATCAGGACACTCTCCAGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAACTGGTTCCCTGTTTaGTCCAGTTCAATGATCTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNWFPV*SSSMIW
Trigger: CCAGATCATTGAACTGGATCAAACAGGGAACCAGTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCATTCAGCTTCCGCTaGCGCTCCAGGGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFSFR*RSRANS
Trigger: GCTGTTAGCCCTGGAGCGTCAGCGGAAGCTGAATGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATGGAGTCATCCCCTaGGATGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNGVIP*DAPSGR
Trigger: CCTGCCAGAAGGGGCATCTCAGGGGATGACTCCATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLDVRLE*KAGVGR
Trigger: GCGACCGACACCAGCTTTTCACTCCAGCCGAACATC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDVRLE*KAGVGR
Trigger: GCGACCGACACCAGCTTTTCACTCCAGCCGAACATC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTTCTCAACTTTTCTaGGCTGCCTGGCCATATCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSQLF*AAWPYL
Trigger: AAGATATGGCCAGGCAGCTCAGAAAAGTTGAGAACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACCGAAACTTGGTATaGAGATTCACCCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHRNLV*RFTLKT
Trigger: GGTTTTGAGGGTGAATCTTCATACCAAGTTTCGGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTGCTGGACTTGCTaGAGATGGCCCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSCWTC*RWPCTT
Trigger: TGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCGATGTCGATGTCTaGGCAGAGTGCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSDVDV*AECLPA
Trigger: AGCAGGGAGGCACTCTGCTCAGACATCGACATCGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGCTTCTTCTGCTCATaGAGTGGCAGGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRFFCS*SGRFQG
Trigger: GCCCTGGAACCTGCCACTGCATGAGCAGAAGAAGCG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACCACGGCACGTTCTaGAGGGTCCAGCACAGAATC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDHGTF*RVQHRI
Trigger: GATTCTGTGCTGGACCCTGCAGAACGTGCCGTGGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCAAGATCGTATGCTaGCTGATCCAGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIKIVC*LIQGMS
Trigger: ACTCATTCCCTGGATCAGGCAGCATACGATCTTGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGACCAGCTCATCCTaGAGGCGCATGACCCTAAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVTSSS*RRMTLK
Trigger: CTTTAGGGTCATGCGCCTGCAGGATGAGCTGGTCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACACTGGTATGGATATaGTGCTGTGTTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTLVWI*CCVSNC
Trigger: GCAGTTGGAAACACAGCAGCATATCCATACCAGTGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTTCACAGATAAAGTaGTCTTCAGCACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPSQIK*SSAHGL
Trigger: CAGACCATGTGCTGAAGAGCACTTTATCTGTGAAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGATCTCAAATGCTaGAAATCCTCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSDLKC*KSSCVC
Trigger: GCACACACAGGAGGATTTGCAGCATTTGAGATCTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSDLK*CKSSCV
Trigger: CACACAGGAGGATTTGCAGCATTTGAGATCTGACCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATGCGGCGGCGCTTaGCTGGAGATTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCGGA*LEISAV
Trigger: CACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAAGAGGAAATCATaGGGCGGCGCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLKRKS*GGACLE
Trigger: CTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTTGTGTATTTCTTaGCAGAGTAGACACCCAACC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLCIS*QSRHPT
Trigger: GGTTGGGTGTCTACTCTGGCAAGAAATACACAAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLQCSF*LSHPVA
Trigger: TGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCTCGTAGAGCCTaGGTCTGCTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSRRA*VCFSSA
Trigger: GGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTGCAAGCTGCTGTTaGAGGACTCCGGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVASCC*RTPGSE
Trigger: CTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTGCAAGCTGCTGTTaGAGGACTCCGGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVASCC*RTPGSE
Trigger: CTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAGCTCTGCCAGTTTaGCCTGCAGCACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSALPV*PAALRL
Trigger: CAGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGCTCTGCCAGTTTaGCCTGCAGCACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSALPV*PAALRL
Trigger: CAGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAGCTTCTTTAGGTTaGTCTCCTTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGASLG*SPFLAA
Trigger: AGCAGCAAGAAAAGGAGAGCAACCTAAAGAAGCTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGTTTTCCATGAACTaGTGCAGCTTGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLFSMN*CSLLES
Trigger: GCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSVVTR*SRVSRF
Trigger: GAACCTAGATACTCTGGAGCACCTGGTTACTACACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMLLPS*FKFLQH
Trigger: ATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGGACCCGTTAGGATaGCCTGAGCTGCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQDPLG*PELPRS
Trigger: TGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTCATCAAACATTTaGTGGAATTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSSNI*WNCWVL
Trigger: CAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCCTCCTGCAGTTGTaGAATTCTTTGTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLLQL*NSLCNL
Trigger: AAGGTTGCACAAAGAATTGCACAACTGCAGGAGGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRLSS*PVIFSL
Trigger: TAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTTCAAAGGACGGCTaGAGTTTCTCCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGASKDG*SFSSST
Trigger: CGTGGAGCTGGAGAAACTGCAGCCGTCCTTTGAAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGGACTGCAGCTGTTaGTCCCTCTCCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVDCSC*SLSSVF
Trigger: GAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTGCAGCGTGGACTaGAGCTGTTGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCCSVD*SCCSLS
Trigger: GGAGAGGGAGCAACAGCTGCAGTCCACGCTGCAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSSWS*PFTHVV
Trigger: CACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSSWS*PFTHVV
Trigger: CACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCSSRL*LETESL
Trigger: TAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAKCLF*FRKPLQ
Trigger: TTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGTTGGTGCTGCTTTaGCCACGTCAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLVLL*PRQDLL
Trigger: GAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTCACCATTCCCCCTaGCAACTGCTTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAHHSP*QLLDRQ
Trigger: TTGCCTGTCAAGCAGTTGGCAGGGGGAATGGTGAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTTGGATCTACTATaGCACCAGCAAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFLDLL*HQQIAG
Trigger: CCCAGCTATTTGCTGGTGGCATAGTAGATCCAAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCAAGCAGCCCAGCTaGCACAGCCTCCTTTACAGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVKQPS*HSLLYR
Trigger: TCTGTAAAGGAGGCTGTGGCAGCTGGGCTGCTTGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTACTGAAATCTTCCTaGCCTTTTCTGCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLKSS*PFLPFP
Trigger: GGGAAAAGGCAGAAAAGGGCAGGAAGATTTCAGTAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGATCTTGAAGTTTaGCTTGCAGTTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSDLEV*LAVPCA
Trigger: GGCACAAGGAACTGCAAGGCAAACTTCAAGATCTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCTCCCTGCTCCACTaGAGTCTCTCCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASLLH*SLSLQR
Trigger: CCTTTGCAGGGAGAGACTGCAGTGGAGCAGGGAGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCACTGTATCGGGCCTaGAATGAGTCTAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLYRA*NESSFS
Trigger: AGAAAAGCTAGACTCATTGCAGGCCCGATACAGTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGACGCCAGGAGGGCATaGTCACGAGACGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDARRA*SRDEGS
Trigger: AGACCCTTCGTCTCGTGAGCATGCCCTCCTGGCGTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATCCATGCAGCACATaGGGCACACCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHPCST*GTPGGR
Trigger: ACGCCCACCTGGTGTGCCGCATGTGCTGCATGGATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCCCGTAGGATCTaGAGATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSRRI*RSTCSC
Trigger: GCAGCTGCAGGTGGATCTCCAGATCCTACGGGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSTLV*ICCCVS
Trigger: GGAAACACAGCAGCATATCCATACCAGTGTGGAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTTCATAACCTGGTaGCACTCTCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFFITW*HSPGAK
Trigger: CTTAGCACCAGGAGAGTGCCACCAGGTTATGAAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTAAGGTGGTCCGATaGGACTCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCKVVR*DSRAER
Trigger: CCTCTCAGCTCTGGAGTCCCATCGGACCACCTTACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTTATGGCCATGCTTaGCTAAGAAGATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAYGHA*LRRSVK
Trigger: CTTCACAGATCTTCTTAGCCAAGCATGGCCATAAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPSESL*PCLAKK
Trigger: CTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGGCTCAGCTTGGTCTaGTTCTCTTCCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGLSLV*FSSRNP
Trigger: AGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGGGGGCTCAGCTTaGTCTGGTTCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPGGSA*SGSLPG
Trigger: TCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAGCTGTCAGCTCCTaGGGGCTCAGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRAVSS*GLSLVW
Trigger: CCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGAGCTGTCAGCTCCTaGGGGCTCAGCTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRAVSS*GLSLVW
Trigger: CCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTACAGTCCAGGGCTaGCTCTCCTTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPTVQG*LSFNVQ
Trigger: CTGGACATTGAAGGAGAGCCAGCCCTGGACTGTAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRVTMS*VASKLL
Trigger: GAGCAGCTTGGAAGCCACCCATGACATGGTCACTCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTGTTGGAAGCGCTaGCTCAGCTCTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSCWKR*LSSASL
Trigger: CAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGATCTTTGCAGGTGTaGTATCCGTTTACACTGCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSLQV*YPFTLP
Trigger: AGGCAGTGTAAACGGATACCACACCTGCAAAGATCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGTCGCTGTCCAATaGCCTTCACCTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSVAVQ*PSPFLI
Trigger: TATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGGTCTTCTAAGCCTTaGAGCGGCAGGGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRSSKP*SGRATV
Trigger: GACAGTCGCCCTGCCGCTCCAAGGCTTAGAAGACCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGIAGC*QELPEV
Trigger: GACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTAAGATCTTCCCAGTaGCTTCTGAGTTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLRSSQ*LLSSTN
Trigger: GTTGGTTGAACTCAGAAGCCACTGGGAAGATCTTAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTCTAGCTGCTCCTaGCGAACTTTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSSCS*RTFPRS
Trigger: AGAGCGAGGGAAAGTTCGCCAGGAGCAGCTAGAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAAGCATATCCACTGTaGCCTTTCGATCATCTAGGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEAYPL*PFDHLG
Trigger: TCCTAGATGATCGAAAGGCCACAGTGGATATGCTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCAGCTCAGCTGACTaGGCTATTCTGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGASSAD*AILPPS
Trigger: AGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGGTCTGTGCCCACTaGGGGCATGGTGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEVCAH*GHGAEL
Trigger: AAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGGCATGTTGGAACTaGCCCAGGGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKACWN*PRAKRA
Trigger: TGCTCTCTTGGCCCTGGGCCAGTTCCAACATGCCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSKAC*NWPRAK
Trigger: CTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCACTGTGGAAACCCTaGGCCTGCTGCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLWKP*ACCSVD
Trigger: GTCCACGCTGCAGCAGGCCCAGGGTTTCCACAGTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCACTGTGGAAACCCTaGGCCTGCTGCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLWKP*ACCSVD
Trigger: GTCCACGCTGCAGCAGGCCCAGGGTTTCCACAGTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTTGGCTCTCAGCTaGGAATGTAGTTCCATATGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLALS*ECSSIC
Trigger: ACATATGGAACTACATTCCCAGCTGAGAGCCAAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCSKSG*EERRCL
Trigger: TAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTTTGCCCGCTTCCTaGCGTCATCCAGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSALPAS*RHPVTD
Trigger: GTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTTTGCCCGCTTCCTaGCGTCATCCAGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIALPAS*RHPVTD
Trigger: GTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSPCTG*SSANCG
Trigger: GCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSPCTG*SSANCG
Trigger: GCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCCCTTTACCCACGTaGTGTCATCTCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAPLPT*CHLCCP
Trigger: AGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCCCTTTACCCACGTaGTGTCATCTCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAPLPT*CHLCCP
Trigger: AGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRVLSS*SCPFTH
Trigger: GTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAAGCCGGCTTTGCTTaGAAACAGAGAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQAGFA*KQRVYT
Trigger: TGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGATGCAGTCGGGATaGCAGACAGCCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVMQSG*QTARMA
Trigger: GGCCATCCTGGCTGTCTGCCATCCCGACTGCATCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGATGCAGTCGGGATaGCAGACAGCCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVMQSG*QTARMA
Trigger: GGCCATCCTGGCTGTCTGCCATCCCGACTGCATCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCCGCTGGATTAGGGTaGTCTCAGCCCACTGGATCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPAGLG*SQPTGS
Trigger: GGATCCAGTGGGCTGAGACCACCCTAATCCAGCGGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGAGAGGATTGGCATaGGGGGAGGTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVRGLA*GEVWVD
Trigger: ATCAACCCACACCTCCCCCCATGCCAATCCTCTCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCTGCATCAGTTGTTaGCCGATAGGCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFICISC*PIGILV
Trigger: AACAAGGATGCCTATCGGCCAACAACTGATGCAGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPGKMV*IFDPVT
Trigger: GGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPGKMV*IFDPVT
Trigger: GGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTGCCCGGGAAGATaGTTTGGATCTTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCPGR*FGSSTP
Trigger: CGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTGCCCGGGAAGATaGTTTGGATCTTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSCPGR*FGSSTP
Trigger: CGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGKSCC*CHQQGM
Trigger: CATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCCCGGTTGGCTTTaGCACCTGTGGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLPGWL*HLWRLG
Trigger: CCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCACCAGCAAATAGCTaGGCTTCCAGCAGCCGGACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPPANS*ASSSRT
Trigger: TGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAGTTCAGTCTTTCTaGTCTTGGGATCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGVQSF*SWDLRR
Trigger: TCTTCTGAGATCCCAAGACCAGAAAGACTGAACTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGATGCCAAGACCCTaGGTCCTCTTTGGCCCACTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEMPRP*VLFGPL
Trigger: GAGTGGGCCAAAGAGGACCCAGGGTCTTGGCATCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGAGAGGCTCCGCCCTaGTGCCTCTCCAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSREAPP*CLSSVF
Trigger: AAAGACACTGGAGAGGCACCAGGGCGGAGCCTCTCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTGCCCTTCTCTCTaGGTACATCATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCPSL*VHHHHL
Trigger: AAGATGATGATGATGTACCCAGAGAGAAGGGCAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGACAGGATCGCTCACTaGGCGTTTCTTCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDRIAH*AFLHQR
Trigger: CCTCTGATGAAGAAACGCTCAGTGAGCGATCCTGTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCTCACTCCGACATaGCCTCTCACTCCGACAGGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPLTPT*PLTPTG
Trigger: TCCTGTCGGAGTGAGAGGTCATGTCGGAGTGAGAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTCTCTGGGCAGTTTaGTGCCTGAGAGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLWAV*CLRGPL
Trigger: TAGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCACTGGCTGTCCTaGTTCCAGGTGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILHWLS*FQVCSI
Trigger: GATGCTGCACACCTGGAATCAGGACAGCCAGTGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEVSQK*LQVSGI
Trigger: GATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATCCATGGAGTCCTaGAGCAGATCCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSMES*SRSSRR
Trigger: CCGCCTGGAGGATCTGCTTCAGGACTCCATGGATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCCATGGAGTCCTaGAGCAGATCCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSMES*SRSSRR
Trigger: CCGCCTGGAGGATCTGCTTCAGGACTCCATGGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLRGFS*TMVFDL
Trigger: GAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATGAGAAAGCAAACTaGTGGAACCATTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNEKAN*WNHCLV
Trigger: AACGAGGCAATGGTTCCATCAGTTTGCTTTCTCATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCAATCCTCAATGTaGTGTCCTGCCTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLQSSM*CPAWHL
Trigger: GAGATGCCAGGCAGGACATCACATTGAGGATTGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIQVWL*CWVPEL
Trigger: CAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIQVWL*CWVPEL
Trigger: CAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGTGTGATGGCATCTaGAGAGGAAATCATGCGGCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLCDGI*RGNHAA
Trigger: CGCCGCATGATTTCCTCTTCAGATGCCATCACACAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGCTTTCTCTCAGATaGCCCCACAGAAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWLSLR*PHRSHP
Trigger: TGGGTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWLSLR*PHRSHP
Trigger: TGGGTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQEGLN*LGGHNE
Trigger: TTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGTCCAGGAAGGACTaGACTGACTGGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWSRKD*TDWVAT
Trigger: TGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRGNCV*EKLPHA
Trigger: AGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCTCGCCTCCTTTTaGACCTCCTCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLELASF*TSSILL
Trigger: CAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGCTCGCCTCCTTTTaGACCTCCTCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHELASF*TSSILL
Trigger: CAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCAGGTTGGGTGCTaGTGGCTGACTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLQVGC*WLTGHS
Trigger: TGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGTACTGCTCACCAATaGGCAGTGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGTAHQ*AVRVLG
Trigger: GCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGGCAAGAGCTGCCTaGAGTCTGTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLARAA*SLFMRS
Trigger: CGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGGCAAGAGCTGCCTaGAGTCTGTTCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILARAA*SLFMRS
Trigger: CGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHPCSG*AQPSHL
Trigger: GAGATGAGAAGGCTGGGCTCAACCAGAACATGGATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCAGATGGAGGCTTCTaGTTGGCTATGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGADGGF*LAMSSS
Trigger: TGAGGAGCTCATAGCCAATCAGAAGCCTCCATCTGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGCTGCTGCCTTGCTaGGGAGATCAGTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWLLPC*GDQSIY
Trigger: GTAGATGGACTGATCTCCTCAGCAAGGCAGCAGCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCTGCACCTGCAGCTaGGCAGTAGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFCTCS*AVVWSC
Trigger: ACAAGACCAGACTACTGCTCAGCTGCAGGTGCAGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTCTCCACATGTGCTaGAGATTTCCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPLHMC*RFPHGD
Trigger: GTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTCTGAGCTGCTCATaGTCCACAGCTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCLSCS*STAGGG
Trigger: GCCTCCTCCAGCTGTGGATCATGAGCAGCTCAGACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLPAAV*AAHDPQ
Trigger: CTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTCCCAGAGGTGCTTaGGTTCTGTCAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPRGA*VLSVVL
Trigger: GAGAACCACTGACAGAACTCAAGCACCTCTGGGAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACAACATCCTGTTTCTaGCTAAGGAACTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTTSCF*LRNFNW
Trigger: CCAGTTGAAGTTCCTTAGTCAGAAACAGGATGTTGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATCCCATTTGTCTCTaGCTTCTCCTAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYPICL*LLLASC
Trigger: ACAACTTGCTAGGAGAAGTCAGAGACAAATGGGATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCATCTCCTCCATAAATaGCTGATGCTCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHLLHK*LMLSDK
Trigger: CTTATCACTGAGCATCAGTCATTTATGGAGGAGATG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATTCAGCTTCCGCTaGCGCTCCAGGGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFSFR*RSRANS
Trigger: GCTGTTAGCCCTGGAGCGTCAGCGGAAGCTGAATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATTCAGCTTCCGCTaGCGCTCCAGGGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFSFR*RSRANS
Trigger: GCTGTTAGCCCTGGAGCGTCAGCGGAAGCTGAATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGCCACTTGTCTTGTaGCCTCATCTTCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEPLVL*PHLQSY
Trigger: ATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATGGAGTCATCCCCTaGGATGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINGVIP*DAPSGR
Trigger: CCTGCCAGAAGGGGCATCTCAGGGGATGACTCCATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAATGGAGTCATCCCCTaGGATGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNGVIP*DAPSGR
Trigger: CCTGCCAGAAGGGGCATCTCAGGGGATGACTCCATT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQLWLL*LALELE
Trigger: CTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDVRLE*KAGVGR
Trigger: GCGACCGACACCAGCTTTTCACTCCAGCCGAACATC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDVRLE*KAGVGR
Trigger: GCGACCGACACCAGCTTTTCACTCCAGCCGAACATC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCCTCTCTTGGGCCTaGCACAGGTGGTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFLSWA*HRWFTS
Trigger: GCTGGTAAACCACCTGTGTCAGGCCCAAGAGAGGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAGGGGGTCTCCGCTaGTATTTTCCTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGGGLR*YFPPSM
Trigger: CATTGAGGGAGGAAAATATCAGCGGAGACCCCCTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTACTTTCCCGAGCTaGATTGCTTCCGGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISTFPS*IASGGV
Trigger: CACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATGTGGGGTACATCTaGAATTTGGGGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNVGYI*NLGFFI
Trigger: GATGAAGAACCCCAAATTTCAGATGTACCCCACATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACACTCCAGCCCTCTaGAGGTTGGTCTTGATCTAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHTPAL*RLVLIY
Trigger: GTAGATCAAGACCAACCTTCAGAGGGCTGGAGTGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAGCTTTTCTGACATaGTGCCCTGCTCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLAFLT*CPALPD
Trigger: GTCCGGCAGAGCAGGGCATCATGTCAGAAAAGCTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACCAGCCGCAACTGCTaGGAATCTCCAAACCGGTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTSRNC*ESPNRY
Trigger: ATACCGGTTTGGAGATTCTCAGCAGTTGCGGCTGGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGCTTCTTCTGCTCATaGAGTGGCAGGTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRFFCS*SGRFQG
Trigger: GCCCTGGAACCTGCCACTGCATGAGCAGAAGAAGCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTGGAAACGCATCCTaGCCTTCTCTCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCGNAS*PSLWAV
Trigger: AACTGCCCAGAGAGAAGGGCAGGATGCGTTTCCACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTTCACCTGCCGCTaGTTTAGGAAGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFTCR*FRKSRA
Trigger: CGCCCTGGACTTCCTAAAGCAGCGGCAGGTGAAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGAGATCTGGAAGTaGAAGATAATGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSEIWK*KIMVQI
Trigger: GATCTGGACCATTATCTTGCACTTCCAGATCTCTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCACTTCAAAGGCCTaGTCCAGGTTCTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGATSKA*SRFSLL
Trigger: TAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCTTGTTTGCAATCTaGAGCAGCAATTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFILFAI*SSNSSL
Trigger: GAGGCTAGAATTGCTGCTGCAGATTGCAAACAAGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTGGAGATCCACCTaGAGCTGCCTGATGAGACCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIWRST*SCLMRP
Trigger: GGGTCTCATCAGGCAGCTGCAGGTGGATCTCCAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTGGAGATCCACCTaGAGCTGCCTGATGAGACCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIWRST*SCLMRP
Trigger: GGGTCTCATCAGGCAGCTGCAGGTGGATCTCCAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGACCAGCTCATCCTaGAGGCGCATGACCCTAAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVTSSS*RRMTLK
Trigger: CTTTAGGGTCATGCGCCTGCAGGATGAGCTGGTCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTGATTTCATCAGGTaGTGGAAGTGGGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSDFIR*WKWALQ
Trigger: TTGTAAAGCCCACTTCCAGCACCTGATGAAATCACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGGTCTGCTGGCACTaGTTCCTCTTGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEVCWH*FLLTQL
Trigger: AAGCTGAGTCAAGAGGAAGCAGTGCCAGCAGACCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATGCGGCGGCGCTTaGCTGGAGATTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCGGA*LEISAV
Trigger: CACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGAAGAGGAAATCATaGGGCGGCGCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLKRKS*GGACLE
Trigger: CTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAAGAGGAAATCATaGGGCGGCGCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILKRKS*GGACLE
Trigger: CTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAAAGCTTATGGCCATaGTTGGCTAAGAAGATCTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFESLWP*LAKKIC
Trigger: ACAGATCTTCTTAGCCAAGCATGGCCATAAGCTTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGTCTTGTTGTTTCTaGAGAGTCTTTTGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVSCCF*RVFCSV
Trigger: GACGGAACAAAAGACTCTGCAGAAACAACAAGACAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGTCCCACCCAGTTaGAAAGATCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPVPPS*KDPPAS
Trigger: AGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLQCSF*LSHPVA
Trigger: TGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCATCTCGTAGAGCCTaGGTCTGCTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSRRA*VCFSSA
Trigger: GGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAGCQR*SGIADT
Trigger: AGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCAACACCCAGGCCTaGAGGCTGTCAGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVNTQA*RLSALL
Trigger: GAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTGCAAGCTGCTGTTaGAGGACTCCGGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVASCC*RTPGSE
Trigger: CTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTGCCAGTTTGCCCTaGAGCACTGAGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSASLP*STEAEL
Trigger: CAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGCCAGTTTGCCCTaGAGCACTGAGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSASLP*STEAEL
Trigger: CAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAGCTCTGCCAGTTTaGCCTGCAGCACTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISALPV*PAALRL
Trigger: CAGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCGCTGGCTCAGCTCTaGCAGTTTGCCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNALAQL*QFALQH
Trigger: GTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCGGAGTTGGGACTCTaGAGCCTGGAAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAELGL*SLEAGQ
Trigger: CTGGCCTGCTTCCAGGCTGCAGAGTCCCAACTCCGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGGACCCGTTAGGATaGCCTGAGCTGCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQDPLG*PELPRS
Trigger: TGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAGCGGCGCTTCTCTaGCTCATTCAGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGAALL*LIQHSL
Trigger: AAGGCTATGCTGAATGAGGCAGAGAAGCGCCGCTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTACTGCTCACTCTTTaGTTCACTTCTAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLLTL*FTSKNS
Trigger: GGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCATTTTTCGACACTCTaGTTCAGAGTCCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHFSTL*FRVLYV
Trigger: GACATAGAGGACTCTGAAGCAGAGTGTCGAAAAATG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCAGTTTACCACACTaGTTATTAAGGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVSLPH*LLRASS
Trigger: GCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATTCTGCCTCCTTCTaGTTGAAGCATATCCACTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYSASF*LKHIHC
Trigger: ACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGTTTTTGCCTGGCTaGTGCCTTGCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLFLPG*CLAEEI
Trigger: GATCTCCTCAGCAAGGCAGCAGCCAGGCAAAAACAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCCTCATCTCTTCCTaGTGCTGTCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCLISS*CCLSCS
Trigger: TGAGCAGCTCAGACAGCAGCAGGAAGAGATGAGGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGGACTGCAGCTGTTaGTCCCTCTCCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVDCSC*SLSSVF
Trigger: GAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGGACTGCAGCTGTTaGTCCCTCTCCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVDCSC*SLSSVF
Trigger: GAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSSWS*PFTHVV
Trigger: CACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSSWS*PFTHVV
Trigger: CACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGTTGGTGCTGCTTTaGCCACGTCAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLVLL*PRQDLL
Trigger: GAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGTTGGTGCTGCTTTaGCCACGTCAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLVLL*PRQDLL
Trigger: GAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCCCACTGGATCCATaGCAGAAGTTCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPLDP*QKFFQE
Trigger: CTCCTGGAAGAACTTCTGGCATGGATCCAGTGGGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTAACAGCCACACCTaGTGCCACCGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNANSHT*CHRAES
Trigger: GCTCTCTGCCCGGTGGCAGCAGGTGTGGCTGTTAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCTTTTTGCACACTTaGACTGAGCCACTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIFLHT*TEPLVL
Trigger: CAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCCCCCGGCAGCACTaGTCTCTGAAGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGPRQH*SLKCLS
Trigger: GCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCCCAGCAACTGCTCTaGAACCCTTTTGTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPQQLL*NPFVPS
Trigger: AGACGGAACAAAAGGGTTGCAGAGCAGTTGCTGGGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCAGGTGGTCGGCATaGTGTTTCTGCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIARWSA*CFCRTS
Trigger: GGATGTCCTGCAGAAACAGCATGCCGACCACCTGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGATCCTCGCTGTTTaGATGACGCCAGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLILAV*MTPGGH
Trigger: ATGCCCTCCTGGCGTCATGCAAACAGCGAGGATCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTAGTATGGAAATTCTaGGACATCTTTCCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLVWKF*DIFPSY
Trigger: GTACGAGGGAAAGATGTCCCAGAATTTCCATACTAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGATCAGTTCAGCTGTaGCTCTGGAGACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSVQL*LWRQIC
Trigger: ACAAATTTGTCTCCAGAGCCACAGCTGAACTGATCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRLMES*RFLRND
Trigger: GTCATTTCTGAGAAACCTCCAAGACTCCATCAAACG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTAAGGTGGTCCGATaGGACTCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCKVVR*DSRAER
Trigger: CCTCTCAGCTCTGGAGTCCCATCGGACCACCTTACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTAAGGTGGTCCGATaGGACTCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCKVVR*DSRAER
Trigger: CCTCTCAGCTCTGGAGTCCCATCGGACCACCTTACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGAGAGGCTCCGCCCTaGTGCCTCTCCAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNREAPP*CLSSAL
Trigger: AAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGGCTCAGCTTGGTCTaGTTCTCTTCCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGLSLV*FSSRNP
Trigger: AGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGGCTCAGCTTGGTCTaGTTCTCTTCCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGLSLV*FSSRNP
Trigger: AGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTGGGGGCTCAGCTTaGTCTGGTTCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPGGSA*SGSLPG
Trigger: TCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGGGGGCTCAGCTTaGTCTGGTTCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPGGSA*SGSLPG
Trigger: TCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTAGCTGATGGCTCTTaGCCTTCCTCAAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVADGS*PSSKLF
Trigger: AAACAATTTTGAGGAAGGCCAAGAGCCATCAGCTAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTACAGTCCAGGGCTaGCTCTCCTTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPTVQG*LSFNVQ
Trigger: CTGGACATTGAAGGAGAGCCAGCCCTGGACTGTAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTACAGTCCAGGGCTaGCTCTCCTTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPTVQG*LSFNVQ
Trigger: CTGGACATTGAAGGAGAGCCAGCCCTGGACTGTAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTGTTGGAAGCGCTaGCTCAGCTCTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCWKR*LSSASL
Trigger: CAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTGTTGGAAGCGCTaGCTCAGCTCTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSCWKR*LSSASL
Trigger: CAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTCCTGGATCTGCTaGGAAAAATGTGCAATATCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSWIC*EKCAIS
Trigger: AGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACAAAGTGGCATCCATaGCTTTCAGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTKWHP*LSGLLL
Trigger: AAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCTTCTTGTGAGTTaGGATAGGTCTTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLLVS*DRSSVI
Trigger: GATTACTGAAGACCTATCCCAACTCACAAGAAGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCCAGGGGCGGAGTTaGGACTCTGCAGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSQGRS*DSAAWK
Trigger: CTTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGATCTTTGTGTACTTaGCTGGCAGATGGAGACATA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSLCT*LADGDI
Trigger: TATGTCTCCATCTGCCAGCCAAGTACACAAAGATCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCTGGAGCAGGTCTTaGTATTGGGTACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSWSRS*YWVLLT
Trigger: TGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTCTGATAAGTCCTaGAGCAGGTCTTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSDKS*SRSWYW
Trigger: CCAATACCAAGACCTGCTCCAGGACTTATCAGAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGGTCTTCTAAGCCTTaGAGCGGCAGGGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSSKP*SGRATV
Trigger: GACAGTCGCCCTGCCGCTCCAAGGCTTAGAAGACCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGGTCTTCTAAGCCTTaGAGCGGCAGGGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRSSKP*SGRATV
Trigger: GACAGTCGCCCTGCCGCTCCAAGGCTTAGAAGACCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGIAGC*QELPEV
Trigger: GACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGIAGC*QELPEV
Trigger: GACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATTTGCTGGAATTGCTaGGTGCTGGCAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGICWNC*VLARAA
Trigger: GGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTCGGACTCGACAGTaGAACTGCCCAATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRTRQ*NCPIPS
Trigger: AGAGGGGATTGGGCAGTTCCACTGTCGAGTCCGAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTCGGACTCGACAGTaGAACTGCCCAATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSRTRQ*NCPIPS
Trigger: AGAGGGGATTGGGCAGTTCCACTGTCGAGTCCGAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTCTAGCTGCTCCTaGCGAACTTTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSSCS*RTFPRS
Trigger: AGAGCGAGGGAAAGTTCGCCAGGAGCAGCTAGAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCAGCTCAGCTGACTaGGCTATTCTGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHASSAD*AILPPS
Trigger: AGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCAGCTCAGCTGACTaGGCTATTCTGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLASSAD*AILPPS
Trigger: AGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGACTGTCCTCCACTaGCTGCCAGCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNETVLH*LPAPPP
Trigger: CGGAGGAGGAGCTGGCAGCCAGTGGAGGACAGTCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCATGATCCACAGCTaGAGGAGGCAGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLMIHS*RRQLCY
Trigger: ATAGCACAGCTGCCTCCTCCAGCTGTGGATCATGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTTGTGTTCAGCAATaGATTCCCTTAGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVCVQQ*IPLVAS
Trigger: TGAGGCAACTAAGGGAATCCATTGCTGAACACAAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRARAR*RTSSFI
Trigger: AATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTAAATCTCTTCCTTaGCTCTCAGCTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCKSLP*LSAGNV
Trigger: TACATTCCCAGCTGAGAGCCAAGGAAGAGATTTACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTTCCAAGCTTCATaGAATTGCTTTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFFQAS*NCFARF
Trigger: GAAGCGGGCAAAGCAATTCCATGAAGCTTGGAAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCCTCAGCCAACTGTaGCTCCACCTTGTACAACCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVLSQL*LHLVQP
Trigger: TGGTTGTACAAGGTGGAGCCACAGTTGGCTGAGGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISPCTG*SSANCG
Trigger: GCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSPCTG*SSANCG
Trigger: GCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCCCTTTACCCACGTaGTGTCATCTCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAPLPT*CHLCCP
Trigger: AGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCCCTTTACCCACGTaGTGTCATCTCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAPLPT*CHLCCP
Trigger: AGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRVLSS*SCPFTH
Trigger: GTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRVLSS*SCPFTH
Trigger: GTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCAGACAGCCAGGATaGCCTCTCCCATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGRQPG*PLPSPL
Trigger: CAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGGTCTCAGCCCACTaGATCCATGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVVSAH*IHARSS
Trigger: AGAACTTCTGGCATGGATCCAGTGGGCTGAGACCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTATGTTCTGAGGGATaGGCTCCTGATCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLCSEG*APDPAG
Trigger: TCCAGCGGGATCAGGAGCCCATCCCTCAGAACATAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGAGAGGATTGGCATaGGGGGAGGTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVRGLA*GEVWVD
Trigger: ATCAACCCACACCTCCCCCCATGCCAATCCTCTCAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGAGAGGATTGGCATaGGGGGAGGTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVRGLA*GEVWVD
Trigger: ATCAACCCACACCTCCCCCCATGCCAATCCTCTCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPGKMV*IFDPVT
Trigger: GGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCTGCCCGGGAAGATaGTTTGGATCTTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSCPGR*FGSSTP
Trigger: CGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTGCCCGGGAAGATaGTTTGGATCTTCGACCCCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCPGR*FGSSTP
Trigger: CGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCCGCTGGCTGGGGTaGCTGGAGAAGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSRWLG*LEKKAW
Trigger: CCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTGGTCCCGCTGGCTaGGGTGGCTGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLGPAG*GGWRRR
Trigger: CCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGKSCC*CHQQGM
Trigger: CATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGKSCC*CHQQGM
Trigger: CATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCACCAGCAAATAGCTaGGCTTCCAGCAGCCGGACA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPPANS*ASSSRT
Trigger: TGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAGGGCTGAGGAGCTaGAGGTCAGGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSGLRS*RSGQWL
Trigger: CAGCCATTGTCCTGACCTCCAGCTCCTCAGCCCTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACAGGATCGCTCACTaGGCGTTTCTTCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDRIAH*AFLHQR
Trigger: CCTCTGATGAAGAAACGCTCAGTGAGCGATCCTGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGGAGACAGGCTCCCTaGCCGCTCACTCCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRRQAP*PLTPVR
Trigger: TCTTACCGGAGTGAGCGGTCAGGGAGCCTGTCTCCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGATCCAGGGAATGAGTaGGTCCACTCGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDPGNE*VHSALV
Trigger: TACCAAAGCCGAGTGGACTCACTCATTCCCTGGATC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGGAAAAGATTTATCTaGCATCAAGATCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGKRFI*HQDRML
Trigger: CAGCATACGATCTTGATGTCAGATAAATCTTTTCCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTCTAAGCGCAGGGTaGCCAGCTCATCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTLSAG*PAHPAG
Trigger: GCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGGAACCAATTCAAGTaGCGAGAAATGGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRNQFK*REMAFP
Trigger: CGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNLCRL*RCLIRK
Trigger: CTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEVSQK*LQVSGI
Trigger: GATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGGTATATTTTCGTTTaGTGGAGTCTTGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRYIFV*WSLGGF
Trigger: GAAACCTCCAAGACTCCATCAAACGAAAATATACCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGCAATCCTCAATGTaGTGTCCTGCCTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLQSSM*CPAWHL
Trigger: GAGATGCCAGGCAGGACATCACATTGAGGATTGCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLTKLL*QHSTIL
Trigger: GAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGTGTGATGGCATCTaGAGAGGAAATCATGCGGCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLCDGI*RGNHAA
Trigger: CGCCGCATGATTTCCTCTTCAGATGCCATCACACAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQEGLN*LGGHNE
Trigger: TTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQEGLN*LGGHNE
Trigger: TTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGGTGTGAGATTGTaGCTGTGTTGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSGVRL*LCWSRK
Trigger: CTTCCTGGACCAACACAGTCACAATCTCACACCTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCTCTGGAATTGCTaGTACTGGCCTAGCAACATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLWNC*YWPSNM
Trigger: CATGTTGCTAGGCCAGTATCAGCAATTCCAGAGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRGNCV*EKLPHA
Trigger: AGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRGNCV*EKLPHA
Trigger: AGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPRLLG*LLMRVM
Trigger: CATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCTGAAGACAGTCTaGAGGCTTTCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLKTV*RLSCRS
Trigger: AGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGCTCGCCTCCTTTTaGACCTCCTCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIELASF*TSSILL
Trigger: CAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGCTCGCCTCCTTTTaGACCTCCTCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSELASF*TSSILL
Trigger: CAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGGGTGCTGATGGCTaGCTGGCCACTCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLGADG*LATQSL
Trigger: CAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLTNEQ*EFLAQR
Trigger: ACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLTNEQ*EFLAQR
Trigger: ACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGTACTGCTCACCAATaGGCAGTGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGTAHQ*AVRVLG
Trigger: GCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHPCSG*AQPSHL
Trigger: GAGATGAGAAGGCTGGGCTCAACCAGAACATGGATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGTTACTACAGGCTTaGGAGCCCAGGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLLQA*EPRASK
Trigger: CTTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTGCAACCTCAGCTTaGTGTACAAGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCATSA*CTSGEA
Trigger: TGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCAGATGGAGGCTTCTaGTTGGCTATGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHADGGF*LAMSSS
Trigger: TGAGGAGCTCATAGCCAATCAGAAGCCTCCATCTGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCAGATGGAGGCTTCTaGTTGGCTATGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLADGGF*LAMSSS
Trigger: TGAGGAGCTCATAGCCAATCAGAAGCCTCCATCTGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGCCTCCTTCTGCTTaGAGCATATCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLPPSA*SISTVA
Trigger: GGCCACAGTGGATATGCTTCAAGCAGAAGGAGGCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCCTCCTTCTGCTTaGAGCATATCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILPPSA*SISTVA
Trigger: GGCCACAGTGGATATGCTTCAAGCAGAAGGAGGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTCCAGCTGCCCAGTaGTTTTCTCTCTATCAGCCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPAAQ*FSLYQP
Trigger: TGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGCTGCTGCCTTGCTaGGGAGATCAGTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWLLPC*GDQSIY
Trigger: GTAGATGGACTGATCTCCTCAGCAAGGCAGCAGCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGCTGCTGCCTTGCTaGGGAGATCAGTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWLLPC*GDQSIY
Trigger: GTAGATGGACTGATCTCCTCAGCAAGGCAGCAGCCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTGCACCTGCAGCTaGGCAGTAGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFCTCS*AVVWSC
Trigger: ACAAGACCAGACTACTGCTCAGCTGCAGGTGCAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATCTTTGTGTCGAATaGTGTCAATGGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNLCVE*CQWRKP
Trigger: AGGCTTTCTCCATTGACATCATTCGACACAAAGATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAAGAGCTCATCCATTaGATCTTTGTGTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEELIH*IFVSND
Trigger: ATCATTCGACACAAAGATTCAATGGATGAGCTCTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTCTCCACATGTGCTaGAGATTTCCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPLHMC*RFPHGD
Trigger: GTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCTCCACATGTGCTaGAGATTTCCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPLHMC*RFPHGD
Trigger: GTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILPAAV*AAHDPQ
Trigger: CTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLPAAV*AAHDPQ
Trigger: CTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCTGGAGAGTGTCCTaGTACTGCACAGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAWRVS*YCTAAC
Trigger: GCAGGCTGCTGTGCAGTATCAGGACACTCTCCAGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCATGGTGCAGAGCTTaGTCACAGTGTTATCTAGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAWCRA*SQCYLA
Trigger: GGCTAGATAACACTGTGATCAAGCTCTGCACCATGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCAATTCACCCTGGTaGTTGAGTTTTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFINSPW*LSFSIS
Trigger: TGAGATGGAAAAACTCAATCACCAGGGTGAATTGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTCCACCTTACTGCTaGCCGCATGCCACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLPPYC*PHATSV
Trigger: AACAGAAGTGGCATGCGGTCAGCAGTAAGGTGGAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCCACCTTACTGCTaGCCGCATGCCACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLPPYC*PHATSV
Trigger: AACAGAAGTGGCATGCGGTCAGCAGTAAGGTGGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGAAATCTCCAGTTCTaGGTCCAGATGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGNLQF*VQMTLC
Trigger: GCAGAGAGTCATCTGGACTCAGAACTGGAGATTTCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKLSSF*VSPASK
Trigger: TTTGCTTGCTGGTGATACTCAGAAACTTGACAACTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQLWLL*LALELE
Trigger: CTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQLWLL*LALELE
Trigger: CTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGTGTCTTGGTCAATaGGGCCCTTTTGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLCLGQ*GPFAWL
Trigger: GAGCCATGCAAAAGGGCCTCATTGACCAAGACACAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTCCCAAGAGCTGTTaGTATATTGGAAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPKSC*YIGRLM
Trigger: CATTAACCTTCCAATATATCAACAGCTCTTGGGACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCCTCTCTTGGGCCTaGCACAGGTGGTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFLSWA*HRWFTS
Trigger: GCTGGTAAACCACCTGTGTCAGGCCCAAGAGAGGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGGAAGAATTACTTaGCAGTCATCTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSGRIT*QSSLDV
Trigger: AACATCCAGAGATGACTGTCAAGTAATTCTTCCAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAGGGGGTCTCCGCTaGTATTTTCCTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGGGLR*YFPPSM
Trigger: CATTGAGGGAGGAAAATATCAGCGGAGACCCCCTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACTTGGAATGTCTTTaGTGGTCTTCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHLECL*WSSLVL
Trigger: AAGAACAAGTGAAGACCATCAAAGACATTCCAAGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGGCTCTCAGATCTTaGAGTTTGCCTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQALRS*SLPCSS
Trigger: GGAACTGCAAGGCAAACTTCAAGATCTGAGAGCCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATGGTTGGAGAGTGTaGCTCAGGCTGTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYGWRV*LRLSAS
Trigger: TGACGCTGACAGCCTGAGTCACACTCTCCAACCATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATGGTTGGAGAGTGTaGCTCAGGCTGTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYGWRV*LRLSAS
Trigger: TGACGCTGACAGCCTGAGTCACACTCTCCAACCATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTGCTGGACTTGCTaGAGATGGCCCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCWTC*RWPCTT
Trigger: TGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTACCATCCTCTTCTaGGAAGGGTGTGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGTILF*EGCGGL
Trigger: AAGACCTCCACACCCTTCTCAGAAGAGGATGGTACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWLSLR*PHRSTQ
Trigger: TTGGGTGCTTCTGTGGGGTCATCTGAGAGAAAGCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGACAGCACCGGTCTTaGATTTCACTGTATCGGGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRQHRS*ISLYRA
Trigger: GGCCCGATACAGTGAAATTCAAGACCGGTGCTGTCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTGGCTCCAGTTTaGTGCCTGAGAGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLAPV*CLRGPL
Trigger: TAGAGGTCCTCTCAGGCATCAAACTGGAGCCAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTGGAAACGCATCCTaGCCTTCTCTCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCGNAS*PSLWAV
Trigger: AACTGCCCAGAGAGAAGGGCAGGATGCGTTTCCACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTGGAAACGCATCCTaGCCTTCTCTCTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCGNAS*PSLWAV
Trigger: AACTGCCCAGAGAGAAGGGCAGGATGCGTTTCCACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCACTAGCTTCACCTaGCGCTGCTTTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFTSFT*RCFRKS
Trigger: GGACTTCCTAAAGCAGCGGCAGGTGAAGCTAGTGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCACTTCAAAGGCCTaGTCCAGGTTCTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHATSKA*SRFSLL
Trigger: TAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCACTTCAAAGGCCTaGTCCAGGTTCTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLATSKA*SRFSLL
Trigger: TAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACATCTGACTCACACTaGACTGGCTGTCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTSDSH*TGCPDS
Trigger: GGAATCAGGACAGCCAGTGCAGTGTGAGTCAGATGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTGGAGATCCACCTaGAGCTGCCTGATGAGACCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIWRST*SCLMRP
Trigger: GGGTCTCATCAGGCAGCTGCAGGTGGATCTCCAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTGGAGATCCACCTaGAGCTGCCTGATGAGACCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIWRST*SCLMRP
Trigger: GGGTCTCATCAGGCAGCTGCAGGTGGATCTCCAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGACCAGCTCATCCTaGAGGCGCATGACCCTAAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVTSSS*RRMTLK
Trigger: CTTTAGGGTCATGCGCCTGCAGGATGAGCTGGTCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGACCAGCTCATCCTaGAGGCGCATGACCCTAAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVTSSS*RRMTLK
Trigger: CTTTAGGGTCATGCGCCTGCAGGATGAGCTGGTCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCATTACCCCACTCTaGTCGCTCCAGTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVITPL*SLQFHL
Trigger: CAGATGAAACTGGAGCGAGCAGAGTGGGGTAATGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSCFIH*NWDWTA
Trigger: TGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGACTGTTCCACCCTaGTGGCCATTTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKTVPP*WPFQWP
Trigger: AGGCCATTGAAATGGCCAGCAGGGTGGAACAGTCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAATCCTCCTGTGTGTaGTCCTGCTCTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKSSCV*SCSAIL
Trigger: GAGGATTGCAGAGCAGGAGCACACACAGGAGGATTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGCCGGAGCTGTTCTaGCACTTTCTTGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVPELF*HFLGLS
Trigger: ACTAAGGCCAAGAAAGTGGCAGAACAGCTCCGGCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTCTACTATCCTCTaGCTGGCCAGGCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHSTIL*LARLHH
Trigger: ATGATGAAGCCTGGCCAGGCAGAGGATAGTAGAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGTTGTCAACTCTTCTaGCAGAACCTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGCQLF*QNLLLQ
Trigger: TTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTGTCCCACCCAGTTaGAAAGATCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPVPPS*KDPPAS
Trigger: AGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGTCCCACCCAGTTaGAAAGATCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPVPPS*KDPPAS
Trigger: AGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLQCSF*LSHPVA
Trigger: TGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILQCSF*LSHPVA
Trigger: TGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKSLWF*CRAGSS
Trigger: AGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCCAGCTCTGTCGCTaGTTTACTCTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCQLCR*FTLLCL
Trigger: GAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQAPEN*SIPGRL
Trigger: TAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCTCGTAGAGCCTaGGTCTGCTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSRRA*VCFSSA
Trigger: GGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATCTCGTAGAGCCTaGGTCTGCTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSRRA*VCFSSA
Trigger: GGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACTGGCCTAGCAACATaGTCAGATGAGAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTGLAT*SDESPI
Trigger: GATTGGGCTCTCATCTGAGCATGTTGCTAGGCCAGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAGCQR*SGIADT
Trigger: AGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATTCTTCCTGTAACTaGTTTGTTGTTGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNSSCN*FVVASC
Trigger: GCAGCTTGCAACAACAAAGCAGTTACAGGAAGAATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTGCCAGTTTGCCCTaGAGCACTGAGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISASLP*STEAEL
Trigger: CAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGCCAGTTTGCCCTaGAGCACTGAGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSASLP*STEAEL
Trigger: CAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGCTCTCCTTTTCTTaGTGCTGGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLSFS*CWSWSC
Trigger: ACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGGAATTCATCCAACTaGTCCTGGCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRNSSN*SWQVDA
Trigger: TGCATCCACTTGCCAGGAGCAGTTGGATGAATTCCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCCTTGTTAGATTCTaGTTGGGCTTTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLVRF*LGFYCF
Trigger: GAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGADSSS*FWRATV
Trigger: TACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAGCGGCGCTTCTCTaGCTCATTCAGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGAALL*LIQHSL
Trigger: AAGGCTATGCTGAATGAGGCAGAGAAGCGCCGCTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAGCGGCGCTTCTCTaGCTCATTCAGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGAALL*LIQHSL
Trigger: AAGGCTATGCTGAATGAGGCAGAGAAGCGCCGCTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTCGACAGTGGAACTaGCCAATCCCCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTRQWN*PIPSSL
Trigger: CAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCQWLP*HLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAACGTCAGCTCTAGCTaGTCCTGGCGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNVSSS*SWRTFP
Trigger: AGGGAAAGTTCGCCAGGAGCAGCTAGAGCTGACGTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGTTTTTGCCTGGCTaGTGCCTTGCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLFLPG*CLAEEI
Trigger: GATCTCCTCAGCAAGGCAGCAGCCAGGCAAAAACAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGTTTTTGCCTGGCTaGTGCCTTGCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLFLPG*CLAEEI
Trigger: GATCTCCTCAGCAAGGCAGCAGCCAGGCAAAAACAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTCGGTTTTCTCCTaGAGTACAGCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHSVFS*STAFCS
Trigger: GGAGCAGAAAGCTGTACTGCAGGAGAAAACCGAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCCTCATCTCTTCCTaGTGCTGTCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCLISS*CCLSCS
Trigger: TGAGCAGCTCAGACAGCAGCAGGAAGAGATGAGGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTTCAAAGGACGGCTaGAGTTTCTCCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASKDG*SFSSST
Trigger: CGTGGAGCTGGAGAAACTGCAGCCGTCCTTTGAAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCCAGATCCTTGTCTaGTCCCTGCGATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSQILV*SLRSSN
Trigger: ATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTACTGCACAGCAGCCTaGATGGCATCCTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYCTAA*MASSSF
Trigger: AAAACTCGAGGATGCCATGCAGGCTGCTGTGCAGTA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCTTTGTTGACTGTTaGCACCGTGGCTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGFVDC*HRGLMS
Trigger: GCTCATCAAGCCACGGTGGCAACAGTCAACAAAGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCTTTGTTGACTGTTaGCACCGTGGCTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGFVDC*HRGLMS
Trigger: GCTCATCAAGCCACGGTGGCAACAGTCAACAAAGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGGACTGCAGCTGTTaGTCCCTCTCCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVDCSC*SLSSVF
Trigger: GAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGGACTGCAGCTGTTaGTCCCTCTCCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVDCSC*SLSSVF
Trigger: GAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCTGCAGCGTGGACTaGAGCTGTTGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCCSVD*SCCSLS
Trigger: GGAGAGGGAGCAACAGCTGCAGTCCACGCTGCAGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTACTGCTGACCGCATaGCACTTCTGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLLTA*HFCSKS
Trigger: GCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATTCTGGAATTCTGTTaGCAGGCTGAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGILEFC*QAEGLF
Trigger: GAAGAGGCCCTCAGCCTGGCAACAGAATTCCAGAAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSIDR*TTFSHR
Trigger: TCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGGACCTGAACTGTaGCGGTTCTCTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSGPEL*RFSFPV
Trigger: AACTGGGAAAGAGAACCGGCACAGTTCAGGTCCTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWCHLC*PQSVLC
Trigger: GCAGAGAACTGATTGAGGGCAGCAGAGATGACACCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCCCACTGGATCCATaGCAGAAGTTCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSPLDP*QKFFQE
Trigger: CTCCTGGAAGAACTTCTGGCATGGATCCAGTGGGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCGGGTGGGAGAAGCTaGCCGGGAAGATGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAGGRS*PGRWFG
Trigger: TCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCCAGCAACTGCTCTaGAACCCTTTTGTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPQQLL*NPFVPS
Trigger: AGACGGAACAAAAGGGTTGCAGAGCAGTTGCTGGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGAATATCTCCACTGTaGCTAGGTCAATCACCCCAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGISPL*LGQSPQ
Trigger: CTGGGGTGATTGACCTAGGCACAGTGGAGATATTCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTCACCATTCCCCCTaGCAACTGCTTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAHHSP*QLLDRQ
Trigger: TTGCCTGTCAAGCAGTTGGCAGGGGGAATGGTGAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCAAGCAGCCCAGCTaGCACAGCCTCCTTTACAGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVKQPS*HSLLYR
Trigger: TCTGTAAAGGAGGCTGTGGCAGCTGGGCTGCTTGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACATCTTTCTGAGCTaGAGTGTGTTCCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHIFLS*SVFHKA
Trigger: GGCCTTGTGGAACACACTGCAGCTCAGAAAGATGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTGCTGCTGCAGGATaGTGTCCTCGGAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPAAAG*CPRKFH
Trigger: GTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTGCAGTCTCTCCCTaGAAAGGCAACAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTAVSP*KGNSTA
Trigger: GGCTGTGCTGTTGCCTTTGCAGGGAGAGACTGCAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATTTTAACTGCCTGGTaGACATCTGTTGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFILTAW*TSVAWF
Trigger: AAACCATGCAACAGATGTGCACCAGGCAGTTAAAAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGACATGATGCCCTaGTCTGCCGGACATGTCAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSDMMP*SAGHVR
Trigger: CCTGACATGTCCGGCAGAGCAGGGCATCATGTCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCATTGAACAGGGCCTaGTCGAGCAGGGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIALNRA*SSRDAF
Trigger: GAAAGCATCCCTGCTCGAGCAGGCCCTGTTCAATGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGGGTCTTCAGCCCTaGTGGCTCCAGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKGLQP*WLQFDA
Trigger: GGCATCAAACTGGAGCCAGCAGGGCTGAAGACCCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGATCCTCGCTGTTTaGATGACGCCAGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLILAV*MTPGGH
Trigger: ATGCCCTCCTGGCGTCATGCAAACAGCGAGGATCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCAGCACAGAATCCTaGCTTTTCCGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSTES*LFRFFC
Trigger: GCAGAAGAAGCGGAAAAGCCAGGATTCTGTGCTGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGESTRL*YSCHLE
Trigger: CTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATCCCGTAGGATCTaGAGATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSRRI*RSTCSC
Trigger: GCAGCTGCAGGTGGATCTCCAGATCCTACGGGATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCCCGTAGGATCTaGAGATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSRRI*RSTCSC
Trigger: GCAGCTGCAGGTGGATCTCCAGATCCTACGGGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTCAGCTGTGGCTCTaGAGACAAATTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVQLWL*RQICAG
Trigger: GCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATTGCAACTGGGACTaGACAGCAGCACTATATGCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHCNWD*TAALYA
Trigger: GGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGCTCTTCAGCACATaGTCTGGATTGCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVLFST*SGLRGF
Trigger: AAAGCCACGCAATCCAGACCATGTGCTGAAGAGCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCGGTAGTCACAGATaGCCTTCACAGATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAGSHR*PSQIKC
Trigger: GCACTTTATCTGTGAAGGCCATCTGTGACTACCGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGCCTCCTTATTCGGTaGGGGAATGAGAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGLLIR*GNEKAN
Trigger: GTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGTTAATGTGTAGCTaGTGCCAAAGGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVLMCS*CQRAIT
Trigger: GGTGATGGCCCTTTGGCACCAGCTACACATTAACAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCAGGTGCTGGAAGTaGGCTTTACAAGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIRCWK*ALQAST
Trigger: GGTGGAAGCTTGTAAAGCCCACTTCCAGCACCTGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATCTCTGTCAGTCTTaGAGCTGGCTGGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHLCQS*SWLETE
Trigger: TTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGCGCAGAGTTGTaGCACTTGAACCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSAEL*HLNLME
Trigger: CTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGCGCAGAGTTGTaGCACTTGAACCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSAEL*HLNLME
Trigger: CTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTAAGGTGGTCCGATaGGACTCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICKVVR*DSRAER
Trigger: CCTCTCAGCTCTGGAGTCCCATCGGACCACCTTACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTAAGGTGGTCCGATaGGACTCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCKVVR*DSRAER
Trigger: CCTCTCAGCTCTGGAGTCCCATCGGACCACCTTACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCTCAGAACTTCCTaGATACTTTCTACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLRTS*ILSTSD
Trigger: ATCTGAGGTAGAAAGTATCCAGGAAGTTCTGAGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGCTGCTCCAAAATaGCCTTCTCAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPAAPK*PSQCLQ
Trigger: CTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACCCGTGTCCGTTCCTaGAGAACCTCATATTGCTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTRVRS*RTSYCS
Trigger: GGAGCAATATGAGGTTCTCCAGGAACGGACACGGGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACCCGTGTCCGTTCCTaGAGAACCTCATATTGCTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTRVRS*RTSYCS
Trigger: GGAGCAATATGAGGTTCTCCAGGAACGGACACGGGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTCAAATTCCTTGTaGTCTTGCAGGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSNSL*SCRNFC
Trigger: GCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTCTACAGGTACTTaGTGTTCAGCCAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSTGT*CSANSS
Trigger: GGAAGAATTGGCTGAACACCAAGTACCTGTAGAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTACAGTCCAGGGCTaGCTCTCCTTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPTVQG*LSFNVQ
Trigger: CTGGACATTGAAGGAGAGCCAGCCCTGGACTGTAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTACAGTCCAGGGCTaGCTCTCCTTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPTVQG*LSFNVQ
Trigger: CTGGACATTGAAGGAGAGCCAGCCCTGGACTGTAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRVTMS*VASKLL
Trigger: GAGCAGCTTGGAAGCCACCCATGACATGGTCACTCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRVTMS*VASKLL
Trigger: GAGCAGCTTGGAAGCCACCCATGACATGGTCACTCG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCTGTTGGAAGCGCTaGCTCAGCTCTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSCWKR*LSSASL
Trigger: CAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAAACATCTCAGCCTaGGGCAGGAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSNISA*GRSFFR
Trigger: CCTAAAGAAGCTCCTGCCCCAGGCTGAGATGTTTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTACTTGGCTGGCAGATaGAGACATATCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYLAGR*RHISRT
Trigger: GGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGIAGC*QELPEV
Trigger: GACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTTGCTGGAATTGCTaGGTGCTGGCAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLICWNC*VLARAA
Trigger: GGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATTTGCTGGAATTGCTaGGTGCTGGCAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHICWNC*VLARAA
Trigger: GGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAAAGATTTCAAGCTaGTGTTTGGCTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSKISS*CLAPST
Trigger: AGTTGAAGGAGCCAAACACCAGCTTGAAATCTTTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSIRSI*SIFYES
Trigger: GGACTCGTAGAAGATGCTCCAGATGGATCGGATGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCGGACTCGACAGTaGAACTGCCCAATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSRTRQ*NCPIPS
Trigger: AGAGGGGATTGGGCAGTTCCACTGTCGAGTCCGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSNLRA*ILLRKS
Trigger: GCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTCTAGCTGCTCCTaGCGAACTTTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSSCS*RTFPRS
Trigger: AGAGCGAGGGAAAGTTCGCCAGGAGCAGCTAGAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCTCTAGCTGCTCCTaGCGAACTTTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSSCS*RTFPRS
Trigger: AGAGCGAGGGAAAGTTCGCCAGGAGCAGCTAGAGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTATACTCAGCAGATaGAGGCTTCTGATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFILSR*RLLIGY
Trigger: ATAGCCAATCAGAAGCCTCCATCTGCTGAGTATAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCAGCTCAGCTGACTaGGCTATTCTGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASSAD*AILPPS
Trigger: AGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCAGCTCAGCTGACTaGGCTATTCTGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSASSAD*AILPPS
Trigger: AGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSYVE*NLVASC
Trigger: GCAGCTGGCCACCAAGTTCCACTCTACATATGAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCATCAGCTTCCGCTTaGTTTCAGCAACCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPSASA*FQQPKL
Trigger: TAGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTCATGATCCACAGCTaGAGGAGGCAGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLMIHS*RRQLCY
Trigger: ATAGCACAGCTGCCTCCTCCAGCTGTGGATCATGAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCATGATCCACAGCTaGAGGAGGCAGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLMIHS*RRQLCY
Trigger: ATAGCACAGCTGCCTCCTCCAGCTGTGGATCATGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRARAR*RTSSFI
Trigger: AATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPGSPT*VQFYHE
Trigger: TTCATGATAAAATTGAACCCATGTTGGAGACCCTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGGTCTGTGCCCACTaGGGGCATGGTGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEVCAH*GHGAEL
Trigger: AAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGGCATGTTGGAACTaGCCCAGGGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKACWN*PRAKRA
Trigger: TGCTCTCTTGGCCCTGGGCCAGTTCCAACATGCCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGGCATGTTGGAACTaGCCCAGGGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKACWN*PRAKRA
Trigger: TGCTCTCTTGGCCCTGGGCCAGTTCCAACATGCCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSKAC*NWPRAK
Trigger: CTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSKAC*NWPRAK
Trigger: CTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAACTTCAATGACTTTTaGGTCTCCACTTATCGGTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNFNDF*VSTYRS
Trigger: AGACCGATAAGTGGAGACCCAAAAGTCATTGAAGTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTCAATTTCACTGTaGAAACCCTGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSISL*KPWACC
Trigger: GCAGCAGGCCCAGGGTTTCCACAGTGAAATTGAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCCTCAGCCAACTGTaGCTCCACCTTGTACAACCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVLSQL*LHLVQP
Trigger: TGGTTGTACAAGGTGGAGCCACAGTTGGCTGAGGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTCCCAGTTCTTTTTaGAAAACCTTATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFPSSF*KTLWAS
Trigger: GGATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTCCAACAGCATATaGACCGTGTCCCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHSNSI*TVSRNS
Trigger: AGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGATGCAGTCGGGATaGCAGACAGCCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVMQSG*QTARMA
Trigger: GGCCATCCTGGCTGTCTGCCATCCCGACTGCATCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGGTCTCAGCCCACTaGATCCATGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVVSAH*IHARSS
Trigger: AGAACTTCTGGCATGGATCCAGTGGGCTGAGACCAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGGTCTCAGCCCACTaGATCCATGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVVSAH*IHARSS
Trigger: AGAACTTCTGGCATGGATCCAGTGGGCTGAGACCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTATGTTCTGAGGGATaGGCTCCTGATCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLCSEG*APDPAG
Trigger: TCCAGCGGGATCAGGAGCCCATCCCTCAGAACATAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGAGAGGATTGGCATaGGGGGAGGTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVRGLA*GEVWVD
Trigger: ATCAACCCACACCTCCCCCCATGCCAATCCTCTCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGAGAGGATTGGCATaGGGGGAGGTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVRGLA*GEVWVD
Trigger: ATCAACCCACACCTCCCCCCATGCCAATCCTCTCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTATCTTCCCATCCTaGTCCTTGTCAATACGCCGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVIFPS*SLSIRR
Trigger: CCGGCGTATTGACAAGGACCAGGATGGGAAGATAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAATCTGTTCCACTTaGAATCTTTTTGCACACTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPICST*NLFAHL
Trigger: CAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGKSCC*CHQQGM
Trigger: CATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGKSCC*CHQQGM
Trigger: CATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACAAGGCCTGTGTCTTaGTCAATGAGGCCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTRPVS*SMRPFC
Trigger: GCAAAAGGGCCTCATTGACCAAGACACAGGCCTTGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTGGCTTTGTTTGTaGCCATCCTTAACCAAAAGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSWLCL*PSLTKS
Trigger: ACTTTTGGTTAAGGATGGCCACAAACAAAGCCAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAAGACTCACAGGTCTaGGAGTCAAAGAAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKDSQV*ESKKPR
Trigger: TCGGGGCTTCTTTGACTCCCAGACCTGTGAGTCTTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGTACATCTGAAATTTaGGGTTCTTCATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGTSEI*GSSSDS
Trigger: GGAATCAGATGAAGAACCCCAAATTTCAGATGTACC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACCCTGGGTCCTCTTTaGCCCACTCTATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTLGPL*PTLSSE
Trigger: CTCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACTTCCACAGCACTCTaGAGGTGGAGGAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTSTAL*RWRNLE
Trigger: TTCCAGATTCCTCCACCTCCAGAGTGCTGTGGAAGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTCATATCCTTGTATaGTTGGAGAGTGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFHILV*LESVTQ
Trigger: CTGAGTCACACTCTCCAACCATACAAGGATATGAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTGGGAGGGGCACTTaGAACACTCTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCGRGT*NTLGSS
Trigger: GGAAGAACCAAGAGTGTTCCAAGTGCCCCTCCCACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGACAGGATCGCTCACTaGGCGTTTCTTCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDRIAH*AFLHQR
Trigger: CCTCTGATGAAGAAACGCTCAGTGAGCGATCCTGTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTCTCTGGGCAGTTTaGTGCCTGAGAGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLWAV*CLRGPL
Trigger: TAGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCTCTGGGCAGTTTaGTGCCTGAGAGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLWAV*CLRGPL
Trigger: TAGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAAGGCATCATAAATTaGAGACACGTAAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEGIIN*RHVSDY
Trigger: GTAATCACTTACGTGTCTTCAATTTATGATGCCTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGATCCAGGGAATGAGTaGGTCCACTCGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDPGNE*VHSALV
Trigger: TACCAAAGCCGAGTGGACTCACTCATTCCCTGGATC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTACATAATGACATCTaGCTCACACTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVHNDI*LTLHWL
Trigger: CAGCCAGTGCAGTGTGAGTCAGATGTCATTATGTAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGGAACCAATTCAAGTaGCGAGAAATGGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRNQFK*REMAFP
Trigger: CGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCGGAACCAATTCAAGTaGCGAGAAATGGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRNQFK*REMAFP
Trigger: CGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGGTAGAAGAAGAATaGGTCGTCTTGTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEVEEE*VVLFRG
Trigger: ACCCCTGAACAAGACGACTCATTCTTCTTCTACCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNLCRL*RCLIRK
Trigger: CTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNLCRL*RCLIRK
Trigger: CTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEVSQK*LQVSGI
Trigger: GATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCAATCCTCAATGTaGTGTCCTGCCTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILQSSM*CPAWHL
Trigger: GAGATGCCAGGCAGGACATCACATTGAGGATTGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLTKLL*QHSTIL
Trigger: GAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLTKLL*QHSTIL
Trigger: GAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGTGTGATGGCATCTaGAGAGGAAATCATGCGGCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILCDGI*RGNHAA
Trigger: CGCCGCATGATTTCCTCTTCAGATGCCATCACACAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGACAGCAGTGGCAAATaGGGTGGAATGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDSSGK*GGMTLN
Trigger: ATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTLQCL*QQWQMR
Trigger: CCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWFTST*PSVAAK
Trigger: CTTAGCTGCCACTGATGGTCATGTAGATGTGAACCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGACAGCAATTCTTGGTaGCGAGCCTTCATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDSNSW*RAFISS
Trigger: TGAGCTAATGAAGGCTCGTCACCAAGAATTGCTGTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQEGLN*LGGHNE
Trigger: TTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQEGLN*LGGHNE
Trigger: TTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGTCCAGGAAGGACTaGACTGACTGGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWSRKD*TDWVAT
Trigger: TGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGGTGTGAGATTGTaGCTGTGTTGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSGVRL*LCWSRK
Trigger: CTTCCTGGACCAACACAGTCACAATCTCACACCTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCCTTTGTGGGAAATaGCATCCTCAGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLCGK*HPQRSF
Trigger: GAAGCTTCTCTGAGGATGTCATTTCCCACAAAGGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCAACATGCTCAGATaGGAGCCCAATCGTATACAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSNMLR*EPNRIH
Trigger: GTGTATACGATTGGGCTCTCATCTGAGCATGTTGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGCTCTGGAATTGCTaGTACTGGCCTAGCAACATG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLWNC*YWPSNM
Trigger: CATGTTGCTAGGCCAGTATCAGCAATTCCAGAGCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGAGTGATGCCACCTaGTCCCTTTCTAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGESDAT*SLSRFC
Trigger: ACAAAACCTAGAAAGGGATCAGGTGGCATCACTCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPRLLG*LLMRVM
Trigger: CATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGFCFP*TAAACW
Trigger: CCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGCTGAAGACAGTCTaGAGGCTTTCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLKTV*RLSCRS
Trigger: AGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGCTGAAGACAGTCTaGAGGCTTTCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLKTV*RLSCRS
Trigger: AGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPPPFC*RQSEGF
Trigger: AAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPPPFC*RQSEGF
Trigger: AAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTTCCTTTACTTTCTaGATTTTAGGGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFASFTF*ILGEFC
Trigger: ACAGAATTCCCCTAAAATTCAGAAAGTAAAGGAAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCAGGTTGGGTGCTaGTGGCTGACTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLQVGC*WLTGHS
Trigger: TGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILTNEQ*EFLAQR
Trigger: ACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLTNEQ*EFLAQR
Trigger: ACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTACTGCTCACCAATaGGCAGTGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGTAHQ*AVRVLG
Trigger: GCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGTACTGCTCACCAATaGGCAGTGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGTAHQ*AVRVLG
Trigger: GCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHPCSG*AQPSHL
Trigger: GAGATGAGAAGGCTGGGCTCAACCAGAACATGGATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHPCSG*AQPSHL
Trigger: GAGATGAGAAGGCTGGGCTCAACCAGAACATGGATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTTTCAATATTCTTaGAGCTTTCCTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFQYS*SFPGTP
Trigger: AGGAGTTCCAGGAAAGCTTCAAGAATATTGAAAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGTTACTACAGGCTTaGGAGCCCAGGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLLQA*EPRASK
Trigger: CTTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTGCAACCTCAGCTTaGTGTACAAGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCATSA*CTSGEA
Trigger: TGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTGCAATTTCACCTaGAGAGGATCCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCCNFT*RGSTWS
Trigger: AGACCAAGTGGATCCTCTTCAGGTGAAATTGCAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATCTGTCAACCAGCTaGGCAAAGGCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYLSTS*AKALRH
Trigger: ATGCCTTAGAGCCTTTGCTCAGCTGGTTGACAGATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCAGATGGAGGCTTCTaGTTGGCTATGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIADGGF*LAMSSS
Trigger: TGAGGAGCTCATAGCCAATCAGAAGCCTCCATCTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCAGCCAGCTCAGCTaGCTGGGCTATTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNISQLS*LGYSAS
Trigger: GGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTCCAGCTGCCCAGTaGTTTTCTCTCTATCAGCCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSPAAQ*FSLYQP
Trigger: TGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTCCAGCTGCCCAGTaGTTTTCTCTCTATCAGCCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSPAAQ*FSLYQP
Trigger: TGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTATTTTGGCAGTCTaGGTGCCAACAGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCILAV*VPTGSE
Trigger: CTCGGAACCTGTTGGCACTCAGACTGCCAAAATACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTTCTGTCTTTGCTaGAACTGGGGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSFCLC*NWGICS
Trigger: GGAGCAAATACCCCAGTTTCAGCAAAGACAGAAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCTCGTACTGTTGTaGTCTCTGAATAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLVLL*SLNSSI
Trigger: GATGCTGCTATTCAGAGATCACAACAGTACGAGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCTGCACCTGCAGCTaGGCAGTAGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFCTCS*AVVWSC
Trigger: ACAAGACCAGACTACTGCTCAGCTGCAGGTGCAGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTCCCCACGGTGACTaGAGAGCTCATCCATTGAAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFPHGD*RAHPLN
Trigger: ATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTCTGAGCTGCTCATaGTCCACAGCTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCLSCS*STAGGG
Trigger: GCCTCCTCCAGCTGTGGATCATGAGCAGCTCAGACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCATGGTGCAGAGCTTaGTCACAGTGTTATCTAGCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAWCRA*SQCYLA
Trigger: GGCTAGATAACACTGTGATCAAGCTCTGCACCATGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCATCTCATTTAACTaGTCTTTGACAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFISFN*SLTVLR
Trigger: CCTCAACACTGTCAAAGATCAGTTAAATGAGATGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATTCACCCTGGTGATTaGGTTTTTCCATCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIHPGD*VFPSQF
Trigger: AAATTGAGATGGAAAAACTCAATCACCAGGGTGAAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCCCAGAGGTGCTTaGGTTCTGTCAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSPRGA*VLSVVL
Trigger: GAGAACCACTGACAGAACTCAAGCACCTCTGGGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCCACCTTACTGCTaGCCGCATGCCACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLPPYC*PHATSV
Trigger: AACAGAAGTGGCATGCGGTCAGCAGTAAGGTGGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGATCTGGTCTCGATaGTCATTTACTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMIWSR*SFTSLA
Trigger: TGCTAATGAAGTAAATGATCATCGAGACCAGATCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTTCTGAGTCCAGATaGCTCTCTGCGTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSESR*LSASSS
Trigger: GCTAGAAGACGCAGAGAGTCATCTGGACTCAGAACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTTCTGAGTCCAGATaGCTCTCTGCGTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSESR*LSASSS
Trigger: GCTAGAAGACGCAGAGAGTCATCTGGACTCAGAACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAAATCTCCAGTTCTaGGTCCAGATGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGNLQF*VQMTLC
Trigger: GCAGAGAGTCATCTGGACTCAGAACTGGAGATTTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAAATCTCCAGTTCTaGGTCCAGATGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGNLQF*VQMTLC
Trigger: GCAGAGAGTCATCTGGACTCAGAACTGGAGATTTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGCTCTGCCAGTTCTaGTTGTGGTATCATACACAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVLCQF*LWYHTQ
Trigger: CTGTGTATGATACCACAATCAGAACTGGCAGAGCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGATCGTTTCAGGACCTaGACTGTGCCGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDRFRT*TVPVLF
Trigger: AAAGAGAACCGGCACAGTTCAGGTCCTGAAACGATC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGATCGTTTCAGGACCTaGACTGTGCCGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLDRFRT*TVPVLF
Trigger: AAAGAGAACCGGCACAGTTCAGGTCCTGAAACGATC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATCAGTTCTCTGCCTaGTCGTTTCAGGACCTGAAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNQFSA*SFQDLN
Trigger: GTTCAGGTCCTGAAACGATCAGGCAGAGAACTGATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTCTACTTTCTTCATaGATTCCTTATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLLSS*IPYGCQ
Trigger: TTGACACCCATAAGGAATTCATGAAGAAAGTAGAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTATATGTCTTGGTaGCCCTGTCCACGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSYMSW*PCPRQV
Trigger: AACCTGACGTGGACAGGGTCACCAAGACATATAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATTCAGCTTCCGCTaGCGCTCCAGGGCTAACAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFSFR*RSRANS
Trigger: GCTGTTAGCCCTGGAGCGTCAGCGGAAGCTGAATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCATCGATAAACTCCTaGCGTGTTATCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPSINS*RVIFPS
Trigger: GGATGGGAAGATAACACGTCAGGAGTTTATCGATGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAATGGAGTCATCCCCTaGGATGCCCCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNGVIP*DAPSGR
Trigger: CCTGCCAGAAGGGGCATCTCAGGGGATGACTCCATT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTLTST*AGAGGR
Trigger: TCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQLWLL*LALELE
Trigger: CTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDVRLE*KAGVGR
Trigger: GCGACCGACACCAGCTTTTCACTCCAGCCGAACATC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGTGTCTTGGTCAATaGGGCCCTTTTGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLCLGQ*GPFAWL
Trigger: GAGCCATGCAAAAGGGCCTCATTGACCAAGACACAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTCCAGTTGCCAGGTaGACTTCTAAGACTTTCAGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPPVAR*TSKTFS
Trigger: ACTGAAAGTCTTAGAAGTTCACCTGGCAACTGGAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGATTTTGAGACTTTATaGGTGATGTTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFDFETL*VMFQFH
Trigger: GTGAAACTGGAACATCACTCATAAAGTCTCAAAATC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTACTTTCCCGAGCTaGATTGCTTCCGGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSTFPS*IASGGV
Trigger: CACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAAGCTTTCTCATCTTaGCGCTGGCCTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEAFSS*RWPSIS
Trigger: AGAGATGGAAGGCCAGCGTCAAGATGAGAAAGCTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGAGTAAACACATTCTaGGTTGCTCTGCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRVNTF*VALQGS
Trigger: AGAGCCTTGCAGAGCAACTCAGAATGTGTTTACTCG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATGCCTTCAACAGCTaGGCAGGAACTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNAFNS*AGTSCG
Trigger: GCCACAAGAAGTTCCTGCTCAGCTGTTGAAGGCATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATGGTTGGAGAGTGTaGCTCAGGCTGTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYGWRV*LRLSAS
Trigger: TGACGCTGACAGCCTGAGTCACACTCTCCAACCATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCACCACATCTTTCTaGGCTGCAGTGTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCTTSF*AAVCST
Trigger: TGTGGAACACACTGCAGCTCAGAAAGATGTGGTGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACCAGCCGCAACTGCTaGGAATCTCCAAACCGGTAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTSRNC*ESPNRY
Trigger: ATACCGGTTTGGAGATTCTCAGCAGTTGCGGCTGGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCTTCACCTGCCGCTaGTTTAGGAAGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFTCR*FRKSRA
Trigger: CGCCCTGGACTTCCTAAAGCAGCGGCAGGTGAAGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCACTAGCTTCACCTaGCGCTGCTTTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFTSFT*RCFRKS
Trigger: GGACTTCCTAAAGCAGCGGCAGGTGAAGCTAGTGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCACTAGCTTCACCTaGCGCTGCTTTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFTSFT*RCFRKS
Trigger: GGACTTCCTAAAGCAGCGGCAGGTGAAGCTAGTGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCACTTCAAAGGCCTaGTCCAGGTTCTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSATSKA*SRFSLL
Trigger: TAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGGCTTTGGTATTCTTaGCATCTGGAGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRLWYS*HLESTS
Trigger: GGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATTCTGTATCTTGTTTaGAATCTGCAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFILYLV*NLQQQF
Trigger: GAATTGCTGCTGCAGATTGCAAACAAGATACAGAAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTGCAGCATCAGCCTaGAGTGTGTTCTTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCAASA*SVFLAS
Trigger: ACTAGCTAAGAACACACTGCAGGCTGATGCTGCACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACATCTGACTCACACTaGACTGGCTGTCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTSDSH*TGCPDS
Trigger: GGAATCAGGACAGCCAGTGCAGTGTGAGTCAGATGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCATTACCCCACTCTaGTCGCTCCAGTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVITPL*SLQFHL
Trigger: CAGATGAAACTGGAGCGAGCAGAGTGGGGTAATGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCATTACCCCACTCTaGTCGCTCCAGTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVITPL*SLQFHL
Trigger: CAGATGAAACTGGAGCGAGCAGAGTGGGGTAATGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCFIH*NWDWTA
Trigger: TGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAACTGGAAGTAAGCTaGATTCTCTTTTACATGTTG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFELEVS*ILFYML
Trigger: CAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCACATGGTCTGGATTaGGTGGCTTTAGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAHGLD*VALAEQ
Trigger: TTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAGACTGTTCCACCCTaGTGGCCATTTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKTVPP*WPFQWP
Trigger: AGGCCATTGAAATGGCCAGCAGGGTGGAACAGTCTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTGTGCTCCTGCTCTaGAATCCTCAATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCVLLL*NPQCDV
Trigger: GACATCACATTGAGGATTGCAGAGCAGGAGCACACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAATCCTCCTGTGTGTaGTCCTGCTCTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKSSCV*SCSAIL
Trigger: GAGGATTGCAGAGCAGGAGCACACACAGGAGGATTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAACCTGATGGAGACTaGTGGAGAAAGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEPDGD*WRKTLH
Trigger: ATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGGTCTGCTGGCACTaGTTCCTCTTGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEVCWH*FLLTQL
Trigger: AAGCTGAGTCAAGAGGAAGCAGTGCCAGCAGACCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGCCGGAGCTGTTCTaGCACTTTCTTGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVPELF*HFLGLS
Trigger: ACTAAGGCCAAGAAAGTGGCAGAACAGCTCCGGCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGCCGGAGCTGTTCTaGCACTTTCTTGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVPELF*HFLGLS
Trigger: ACTAAGGCCAAGAAAGTGGCAGAACAGCTCCGGCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTCTACTATCCTCTaGCTGGCCAGGCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHSTIL*LARLHH
Trigger: ATGATGAAGCCTGGCCAGGCAGAGGATAGTAGAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATGCGGCGGCGCTTaGCTGGAGATTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSCGGA*LEISAV
Trigger: CACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAAGAGGAAATCATaGGGCGGCGCTTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLKRKS*GGACLE
Trigger: CTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTTGTCAACTCTTCTaGCAGAACCTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGCQLF*QNLLLQ
Trigger: TTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGTTGTCAACTCTTCTaGCAGAACCTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGCQLF*QNLLLQ
Trigger: TTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTGTCCCACCCAGTTaGAAAGATCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPVPPS*KDPPAS
Trigger: AGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKSLWF*CRAGSS
Trigger: AGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKSLWF*CRAGSS
Trigger: AGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCCAGCTCTGTCGCTaGTTTACTCTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCQLCR*FTLLCL
Trigger: GAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCCAGCTCTGTCGCTaGTTTACTCTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCQLCR*FTLLCL
Trigger: GAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQAPEN*SIPGRL
Trigger: TAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQAPEN*SIPGRL
Trigger: TAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGELQDC*LPYAYY
Trigger: ATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTGGCCTAGCAACATaGTCAGATGAGAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTGLAT*SDESPI
Trigger: GATTGGGCTCTCATCTGAGCATGTTGCTAGGCCAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAGCQR*SGIADT
Trigger: AGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAGCQR*SGIADT
Trigger: AGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTGCAAGCTGCTGTTaGAGGACTCCGGGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVASCC*RTPGSE
Trigger: CTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGCTCTCCTTTTCTTaGTGCTGGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLSFS*CWSWSC
Trigger: ACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGCTCTCCTTTTCTTaGTGCTGGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLSFS*CWSWSC
Trigger: ACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTCCATGAACTGCTaGAGCTTGTTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSMNC*SLLESC
Trigger: GCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCGGAATTCATCCAACTaGTCCTGGCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRNSSN*SWQVDA
Trigger: TGCATCCACTTGCCAGGAGCAGTTGGATGAATTCCG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCGGAATTCATCCAACTaGTCCTGGCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRNSSN*SWQVDA
Trigger: TGCATCCACTTGCCAGGAGCAGTTGGATGAATTCCG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGTATCCGTTTACACTaGCTACAGAGCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGIRLH*LQSFLQ
Trigger: CTGTAGGAAGCTCTGTAGGCAGTGTAAACGGATACC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAATTGAGGTCCTCTTaGATTTTCTTCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFELRSS*IFFQFS
Trigger: AGAAAACTGGAAGAAAATGCAAGAGGACCTCAATTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLADSSS*FWRATV
Trigger: TACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHADSSS*FWRATV
Trigger: TACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCATAAACTGGACCTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSINWT*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTGCTCATGCTGCTaGCTTCGTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSCSCC*LRASNS
Trigger: GGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTGCTCATGCTGCTaGCTTCGTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCSCC*LRASNS
Trigger: GGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGGACCCGTTAGGATaGCCTGAGCTGCCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQDPLG*PELPRS
Trigger: TGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCCTTGAGGTACTaGTCACCAATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSLRY*SPMSSE
Trigger: CTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAACATTTGCTGGAATTaGTGGGTGCTGGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNICWN*WVLARA
Trigger: AGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWSGSY*SLFASL
Trigger: AAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTCGACAGTGGAACTaGCCAATCCCCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTRQWN*PIPSSL
Trigger: CAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTCGACAGTGGAACTaGCCAATCCCCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITRQWN*PIPSSL
Trigger: CAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCQWLP*HLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCQWLP*HLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAACGTCAGCTCTAGCTaGTCCTGGCGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNVSSS*SWRTFP
Trigger: AGGGAAAGTTCGCCAGGAGCAGCTAGAGCTGACGTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAACGTCAGCTCTAGCTaGTCCTGGCGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINVSSS*SWRTFP
Trigger: AGGGAAAGTTCGCCAGGAGCAGCTAGAGCTGACGTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGACTGGGCTATTCTaGCTCCTTCTGCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLTGLF*LLLLEA
Trigger: TGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNLVAS*RACSKV
Trigger: AACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNLVAS*RACSKV
Trigger: AACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCACTCGGTTTTCTCCTaGAGTACAGCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHSVFS*STAFCS
Trigger: GGAGCAGAAAGCTGTACTGCAGGAGAAAACCGAGTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCCTCATCTCTTCCTaGTGCTGTCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCLISS*CCLSCS
Trigger: TGAGCAGCTCAGACAGCAGCAGGAAGAGATGAGGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGGATTCCCTTAGTTaGCTCATCTCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMDSLS*LISSCC
Trigger: GCAGCAGGAAGAGATGAGGCAACTAAGGGAATCCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLSAP*DLPMSS
Trigger: GGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLSAP*DLPMSS
Trigger: GGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCCAGATCCTTGTCTaGTCCCTGCGATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSQILV*SLRSSN
Trigger: ATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGTGGTCAGGAGAGCTaGCATGTCATACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGGQES*HVIPEL
Trigger: AAGTTCTGGTATGACATGGCAGCTCTCCTGACCACC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTGGTCAGGAGAGCTaGCATGTCATACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGGQES*HVIPEL
Trigger: AAGTTCTGGTATGACATGGCAGCTCTCCTGACCACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATTCATCTCATCAATaGTCTTCTTCACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYSSHQ*SSSLQA
Trigger: AGCCTGAAGTGAAGAAGAGCATTGATGAGATGAATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTACTGCACAGCAGCCTaGATGGCATCCTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYCTAA*MASSSF
Trigger: AAAACTCGAGGATGCCATGCAGGCTGCTGTGCAGTA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRFSQR*LSSVSG
Trigger: ACCACTGACAGAACTCAAGCACCTCTGGGAGAATCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCTTTGTTGACTGTTaGCACCGTGGCTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGFVDC*HRGLMS
Trigger: GCTCATCAAGCCACGGTGGCAACAGTCAACAAAGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTACTGCTGACCGCATaGCACTTCTGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLLTA*HFCSKS
Trigger: GCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTACTGCTGACCGCATaGCACTTCTGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLLTA*HFCSKS
Trigger: GCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATTCTGGAATTCTGTTaGCAGGCTGAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHILEFC*QAEGLF
Trigger: GAAGAGGCCCTCAGCCTGGCAACAGAATTCCAGAAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTCTGGAATTCTGTTaGCAGGCTGAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLILEFC*QAEGLF
Trigger: GAAGAGGCCCTCAGCCTGGCAACAGAATTCCAGAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTAGCAAAAACCTTGTaGTCTTCTATCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLAKTL*SSIWER
Trigger: TCTTTCCCAGATAGAAGAGCACAAGGTTTTTGCTAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSIDR*TTFSHR
Trigger: TCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSIDR*TTFSHR
Trigger: TCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCGCTCTACAGACTTaGCACAGACAGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVALQT*HRQYPI
Trigger: AATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGGACCTGAACTGTaGCGGTTCTCTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSGPEL*RFSFPV
Trigger: AACTGGGAAAGAGAACCGGCACAGTTCAGGTCCTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAGGACCTGAACTGTaGCGGTTCTCTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSGPEL*RFSFPV
Trigger: AACTGGGAAAGAGAACCGGCACAGTTCAGGTCCTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWCHLC*PQSVLC
Trigger: GCAGAGAACTGATTGAGGGCAGCAGAGATGACACCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWCHLC*PQSVLC
Trigger: GCAGAGAACTGATTGAGGGCAGCAGAGATGACACCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSSWS*PFTHVV
Trigger: CACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCTGTTTTAAGGCTTaGTCAAGCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHACFKA*SSRLCL
Trigger: CAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGTTGGTGCTGCTTTaGCCACGTCAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLVLL*PRQDLL
Trigger: GAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCCCACTGGATCCATaGCAGAAGTTCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSPLDP*QKFFQE
Trigger: CTCCTGGAAGAACTTCTGGCATGGATCCAGTGGGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCCCACTGGATCCATaGCAGAAGTTCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISPLDP*QKFFQE
Trigger: CTCCTGGAAGAACTTCTGGCATGGATCCAGTGGGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIFNLI*ISCWPI
Trigger: TATCGGCCAACAACTGATGCAGATAAGATTGAAGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLGKSC*WCHQQG
Trigger: CCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAATATCTCCACTGTaGCTAGGTCAATCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGISPL*LGQSPQ
Trigger: CTGGGGTGATTGACCTAGGCACAGTGGAGATATTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAATGAGGCCCTTTTaGATGGCTCTGAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSMRPF*MALKMG
Trigger: CCCCATCTTCAGAGCCATGCAAAAGGGCCTCATTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGATTCTGAGCAGGGATaGGTCACCGAAACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDSEQG*VTETWY
Trigger: ATACCAAGTTTCGGTGACGCATCCCTGCTCAGAATC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAACTGCTGCTTCCCTaGTCATTTGGACACTTTGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGELLLP*SFGHFA
Trigger: AGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCAGAAAGAACTGCTaGTTCCCTGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLRKNC*FPAHLD
Trigger: GTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTTGCAGTTCCTTGTaGCGATTTAACACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPCSSL*RFNTVA
Trigger: GGCCACAGTGTTAAATCGGCACAAGGAACTGCAAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCAGCACAGAATCCTaGCTTTTCCGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSTES*LFRFFC
Trigger: GCAGAAGAAGCGGAAAAGCCAGGATTCTGTGCTGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHESTRL*YSCHLE
Trigger: CTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLESTRL*YSCHLE
Trigger: CTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTCAGCTGTGGCTCTaGAGACAAATTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVQLWL*RQICAG
Trigger: GCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTCAGCTGTGGCTCTaGAGACAAATTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVQLWL*RQICAG
Trigger: GCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGAAGTAGGTTTTCTTaGCTGAGATATTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSRFS*LRYWDY
Trigger: GTAATCCCAATATCTCAGCCAAGAAAACCTACTTCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVCLAG*FSSDNT
Trigger: GGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATTGCAACTGGGACTaGACAGCAGCACTATATGCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHCNWD*TAALYA
Trigger: GGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCATCCATTGCAACTaGGACTGGACAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFIHCN*DWTAAL
Trigger: TAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTCCTTTTCATCCATaGAGTCCTGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAPFHP*SPEADP
Trigger: AGGATCTGCTTCAGGACTCCATGGATGAAAAGGAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTCCCAACAAGACTaGCAACGGAACTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGISQQD*QRNSWT
Trigger: AGTCCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCGGTAGTCACAGATaGCCTTCACAGATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAGSHR*PSQIKC
Trigger: GCACTTTATCTGTGAAGGCCATCTGTGACTACCGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCCTCCTTATTCGGTaGGGGAATGAGAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGLLIR*GNEKAN
Trigger: GTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGTTAATGTGTAGCTaGTGCCAAAGGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVLMCS*CQRAIT
Trigger: GGTGATGGCCCTTTGGCACCAGCTACACATTAACAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGTTAATGTGTAGCTaGTGCCAAAGGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVLMCS*CQRAIT
Trigger: GGTGATGGCCCTTTGGCACCAGCTACACATTAACAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGGTTTTTCATAACCTaGTGGCACTCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRFFIT*WHSPGA
Trigger: AGCACCAGGAGAGTGCCACCAGGTTATGAAAAACCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCAGGTGCTGGAAGTaGGCTTTACAAGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIRCWK*ALQAST
Trigger: GGTGGAAGCTTGTAAAGCCCACTTCCAGCACCTGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATCTCTGTCAGTCTTaGAGCTGGCTGGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHLCQS*SWLETE
Trigger: TTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPDGDC*RKTLHF
Trigger: GAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGAGCGCAGAGTTGTaGCACTTGAACCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSAEL*HLNLME
Trigger: CTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTACTATCCTCTGCCTaGCCAGGCTTCATCATTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLSSA*PGFIIS
Trigger: GGAAATGATGAAGCCTGGCCAGGCAGAGGATAGTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTGCTGCTCCAAAATaGCCTTCTCAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPAAPK*PSQCLQ
Trigger: CTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGCTGCTCCAAAATaGCCTTCTCAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPAAPK*PSQCLQ
Trigger: CTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCGCTTTGGAGCTGCTaGAGTTGGTTTGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLWSC*SWFAEP
Trigger: TGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCGCTTTGGAGCTGCTaGAGTTGGTTTGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLWSC*SWFAEP
Trigger: TGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGGGGGCTCAGCTTaGTCTGGTTCTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPGGSA*SGSLPG
Trigger: TCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACCCGTGTCCGTTCCTaGAGAACCTCATATTGCTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTRVRS*RTSYCS
Trigger: GGAGCAATATGAGGTTCTCCAGGAACGGACACGGGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTCAACTTCCCTTATaGACTGCAGCAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVQLPL*TAAGSP
Trigger: TGGAGAGCCTGCTGCAGTCCATAAGGGAAGTTGAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTTTTCTTGCTGCTaGAGCTGGAGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSFSCC*SWSCWK
Trigger: CTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTTTTCTTGCTGCTaGAGCTGGAGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFSCC*SWSCWK
Trigger: CTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAAACATCTCAGCCTaGGGCAGGAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSNISA*GRSFFR
Trigger: CCTAAAGAAGCTCCTGCCCCAGGCTGAGATGTTTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAAACATCTCAGCCTaGGGCAGGAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSNISA*GRSFFR
Trigger: CCTAAAGAAGCTCCTGCCCCAGGCTGAGATGTTTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACTGCTGCAGCTTGTTaGAGAGCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTAAAC*RAAQTS
Trigger: AGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCAAAGTGAGCTCCTaGATCTGCTGGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAKVSS*ICWEKC
Trigger: ACATTTTTCCCAGCAGATCCAGGAGCTCACTTTGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCCAACTGCTCCTaGCAAGTGGATGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSNCS*QVDASF
Trigger: GAAAGATGCATCCACTTGCCAGGAGCAGTTGGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAACCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEPVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTATGGAACCTGTTTTaGCTTGGGAATCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVWNLF*LGNQEL
Trigger: CAGCTCCTGATTCCCAAGCCAAAACAGGTTCCATAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGTTAGATTCTGCTTaGGCTTTTACTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLDSA*AFTVSV
Trigger: GACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTACTTGGCTGGCAGATaGAGACATATCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYLAGR*RHISRT
Trigger: GGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTACTTGGCTGGCAGATaGAGACATATCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYLAGR*RHISRT
Trigger: GGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATAGCTTGGTCAATTTaGCTGGAACGGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIAWSI*LERELS
Trigger: GCTCAACTCCCGTTCCAGCCAAATTGACCAAGCTAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCAGGTCTTGGTATTaGGTACTTTTAACAATAGCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRSWY*VLLTIA
Trigger: AGCTATTGTTAAAAGTACCCAATACCAAGACCTGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGGTCTTCTAAGCCTTaGAGCGGCAGGGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRSSKP*SGRATV
Trigger: GACAGTCGCCCTGCCGCTCCAAGGCTTAGAAGACCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATTTGCTGGAATTGCTaGGTGCTGGCAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSICWNC*VLARAA
Trigger: GGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATTTGCTGGAATTGCTaGGTGCTGGCAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIICWNC*VLARAA
Trigger: GGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTAGCTCAGACATCTTaGACTTGCACTCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVAQTS*TCTRLS
Trigger: GGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGGCATCCATGTTCTaGTTGAGCCCAGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMASMF*LSPAFS
Trigger: TGAGAAGGCTGGGCTCAACCAGAACATGGATGCCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGGCATCCATGTTCTaGTTGAGCCCAGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMASMF*LSPAFS
Trigger: TGAGAAGGCTGGGCTCAACCAGAACATGGATGCCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSIRSI*SIFYES
Trigger: GGACTCGTAGAAGATGCTCCAGATGGATCGGATGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAGCTTGTTTTCCATaGTCAGGCAGCTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLACFP*SGSYCS
Trigger: TGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCTAGGAGTCGCTaGAGCAACTTCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSRSR*SNFCSW
Trigger: CCAAGAACAGAAGTTGCTCCAGCGACTCCTAGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTGCTGGTGTATTTTaGCAGTCTGAGTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSAGVF*QSECQQ
Trigger: CTGTTGGCACTCAGACTGCCAAAATACACCAGCAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSYVE*NLVASC
Trigger: GCAGCTGGCCACCAAGTTCCACTCTACATATGAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSYVE*NLVASC
Trigger: GCAGCTGGCCACCAAGTTCCACTCTACATATGAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCATCAGCTTCCGCTTaGTTTCAGCAACCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPSASA*FQQPKL
Trigger: TAGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCATCAGCTTCCGCTTaGTTTCAGCAACCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPSASA*FQQPKL
Trigger: TAGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCATGATCCACAGCTaGAGGAGGCAGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILMIHS*RRQLCY
Trigger: ATAGCACAGCTGCCTCCTCCAGCTGTGGATCATGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRARAR*RTSSFI
Trigger: AATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRARAR*RTSSFI
Trigger: AATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTTCAATTTCACTGTaGAAACCCTGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSISL*KPWACC
Trigger: GCAGCAGGCCCAGGGTTTCCACAGTGAAATTGAAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGTTTGATTTTGTCTaGGTCATTGGAAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKFDFV*VIGNLQ
Trigger: CTGGAGATTTCCAATGACCCAGACAAAATCAAACTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCCTCAGCCAACTGTaGCTCCACCTTGTACAACCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVLSQL*LHLVQP
Trigger: TGGTTGTACAAGGTGGAGCCACAGTTGGCTGAGGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRVLSS*SCPFTH
Trigger: GTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTCCAACAGCATATaGACCGTGTCCCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHSNSI*TVSRNS
Trigger: AGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCACTCCAACAGCATATaGACCGTGTCCCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHSNSI*TVSRNS
Trigger: AGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGGTCTCAGCCCACTaGATCCATGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVVSAH*IHARSS
Trigger: AGAACTTCTGGCATGGATCCAGTGGGCTGAGACCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPGKMV*IFDPVT
Trigger: GGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGGAGAAGAAGGCATaGATGTACAGCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLEKKA*MYSCGY
Trigger: GTAACCACAGCTGTACATCCATGCCTTCTTCTCCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAGWGG*RRRHGC
Trigger: ACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACAAGGCCTGTGTCTTaGTCAATGAGGCCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTRPVS*SMRPFC
Trigger: GCAAAAGGGCCTCATTGACCAAGACACAGGCCTTGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTTCCAGTTTCACTTaGAATGTCTTTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCSSFT*NVFDGL
Trigger: AAGACCATCAAAGACATTCCAAGTGAAACTGGAACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTTTGACAGCAGTGTaGCTAGACACAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLTAV*LDTRPW
Trigger: CCAAGGCCTTGTGTCTAGCCACACTGCTGTCAAACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACAGAGCACAGAGAGTaGGTCCTGGGGTCTAAGATA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTEHRE*VLGSKI
Trigger: TATCTTAGACCCCAGGACCCACTCTCTGTGCTCTGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATGCCAGCCTTTTCTaGAGCACACAGACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYASLF*STQTPS
Trigger: GCTGGGAGTCTGTGTGCTCCAGAAAAGGCTGGCATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATGCCAGCCTTTTCTaGAGCACACAGACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYASLF*STQTPS
Trigger: GCTGGGAGTCTGTGTGCTCCAGAAAAGGCTGGCATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGATAATGGTTCTTTCTaGACAGTACTAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFDNGSF*TVLAVS
Trigger: AGAAACTGCTAGTACTGTCCAGAAAGAACCATTATC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGCCATGTCTCCTTTaGAAATGTGGGGTACATCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQPCLL*KCGVHL
Trigger: CAGATGTACCCCACATTTCCAAAGGAGACATGGCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACCCTGGGTCCTCTTTaGCCCACTCTATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTLGPL*PTLSSE
Trigger: CTCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGCACTGTCCTTGTaGGCAGTTTCTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSALSL*AVSPEE
Trigger: TTCTTCCGGAGAAACTGCCCACAAGGACAGTGCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCTCTGCAAGGCTCTaGGTTTACACCTTCAATCCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCSARL*VYTFNP
Trigger: GGGATTGAAGGTGTAAACCCAGAGCCTTGCAGAGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGGTTGAATCTGTTTaGTTCTCATTTCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKVESV*FSFQCP
Trigger: GGGACATTGAAATGAGAACCAAACAGATTCAACCTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACAGCACTCTGGAGGTaGAGGAATCTGGAACTCCAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTALWR*RNLELQ
Trigger: TTGGAGTTCCAGATTCCTCCACCTCCAGAGTGCTGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTTCCACAGCACTCTaGAGGTGGAGGAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTSTAL*RWRNLE
Trigger: TTCCAGATTCCTCCACCTCCAGAGTGCTGTGGAAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAATCCAAGAACCTGTaGGAGGGGCACTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQSKNL*EGHLEH
Trigger: GTGTTCCAAGTGCCCCTCCCACAGGTTCTTGGATTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAGGGCTGAGGAGCTaGAGGTCAGGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSGLRS*RSGQWL
Trigger: CAGCCATTGTCCTGACCTCCAGCTCCTCAGCCCTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATCTGCTCTGTCTCTaGCACAGCTCTTCCAGTACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHLLCL*HSSSST
Trigger: TGTACTGGAAGAGCTGTGCCAGAGACAGAGCAGATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238555.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGCGGCACACCAGGTaGGCGTTGAACTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMRHTR*ALNSCS
Trigger: TGAACATGAGTTCAACGCCCACCTGGTGTGCCGCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGGATTGCCATCTGTaGTGTCATCATTGCGGATAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWDCHL*CHHCGY
Trigger: ATATCCGCAATGATGACATCACAGATGGCAATCCCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAAAGTTGGTGCATTTaGCTCCTGTGTAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKSWCI*LLCNQL
Trigger: CAGCTGGTTACACAGGAGTCAAATGCACCAACTTTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTACATAATGACATCTaGCTCACACTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVHNDI*LTLHWL
Trigger: CAGCCAGTGCAGTGTGAGTCAGATGTCATTATGTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTACATAATGACATCTaGCTCACACTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVHNDI*LTLHWL
Trigger: CAGCCAGTGCAGTGTGAGTCAGATGTCATTATGTAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGGAACCAATTCAAGTaGCGAGAAATGGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRNQFK*REMAFP
Trigger: CGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGTTCTGCTTTCAGGTaGGTAGTGGTTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGSAFR*VVVKVE
Trigger: CTCTACTTTAACCACTACTCACCTGAAAGCAGAACC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINLCRL*RCLIRK
Trigger: CTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNLCRL*RCLIRK
Trigger: CTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATTCGGTGGGGGAATaGGAAAGCAAACTGATGGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYSVGE*ESKLME
Trigger: TTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILTKLL*QHSTIL
Trigger: GAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLTKLL*QHSTIL
Trigger: GAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCGGAGAGCATCACTaGTATATTTTACATGCTGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAGEHH*YILHAE
Trigger: CTCAGCATGTAAAATATATCAGTGATGCTCTCCGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCTSVR*GSCSLC
Trigger: ACACAAGGAACAACTACCTCATCTCACACTAGTGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACAGCAGTGGCAAATaGGGTGGAATGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDSSGK*GGMTLN
Trigger: ATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTLQCL*QQWQMR
Trigger: CCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGCTTTCTCTCAGATaGCCCCACAGAAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWLSLR*PHRSHP
Trigger: TGGGTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWFTST*PSVAAK
Trigger: CTTAGCTGCCACTGATGGTCATGTAGATGTGAACCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACAGCAATTCTTGGTaGCGAGCCTTCATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDSNSW*RAFISS
Trigger: TGAGCTAATGAAGGCTCGTCACCAAGAATTGCTGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAGGTGTGAGATTGTaGCTGTGTTGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSGVRL*LCWSRK
Trigger: CTTCCTGGACCAACACAGTCACAATCTCACACCTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCCTTTGTGGGAAATaGCATCCTCAGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLCGK*HPQRSF
Trigger: GAAGCTTCTCTGAGGATGTCATTTCCCACAAAGGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCAACATGCTCAGATaGGAGCCCAATCGTATACAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSNMLR*EPNRIH
Trigger: GTGTATACGATTGGGCTCTCATCTGAGCATGTTGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCAACATGCTCAGATaGGAGCCCAATCGTATACAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSNMLR*EPNRIH
Trigger: GTGTATACGATTGGGCTCTCATCTGAGCATGTTGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGCTCTGGAATTGCTaGTACTGGCCTAGCAACATG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLWNC*YWPSNM
Trigger: CATGTTGCTAGGCCAGTATCAGCAATTCCAGAGCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTCTGGAATTGCTaGTACTGGCCTAGCAACATG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLWNC*YWPSNM
Trigger: CATGTTGCTAGGCCAGTATCAGCAATTCCAGAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRGNCV*EKLPHA
Trigger: AGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGESVVS*IGLQSR
Trigger: CCTGGACTGTAGGCCTATTCAAGAAACTACAGATTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGAGTGATGCCACCTaGTCCCTTTCTAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLESDAT*SLSRFC
Trigger: ACAAAACCTAGAAAGGGATCAGGTGGCATCACTCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPRLLG*LLMRVM
Trigger: CATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGFCFP*TAAACW
Trigger: CCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGFCFP*TAAACW
Trigger: CCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLPLPK*APGSAG
Trigger: CCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGCTGAAGACAGTCTaGAGGCTTTCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLKTV*RLSCRS
Trigger: AGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTGAAGACAGTCTaGAGGCTTTCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLKTV*RLSCRS
Trigger: AGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPPPFC*RQSEGF
Trigger: AAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPPPFC*RQSEGF
Trigger: AAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGCTCGCCTCCTTTTaGACCTCCTCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNELASF*TSSILL
Trigger: CAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTCCCATCGGGAATTaGGGTCCTCTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFPIGN*GPLAFS
Trigger: AGAAAATGCAAGAGGACCTCAATTCCCGATGGGAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTCAACCCACTTCTaGCTGATGCTTTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSTHF*LMLCRS
Trigger: AGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTCAACCCACTTCTaGCTGATGCTTTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSTHF*LMLCRS
Trigger: AGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTCCTGGAACTCCTTaGGCCTCTGAGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFPGTP*ASESFL
Trigger: AAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGTTACTACAGGCTTaGGAGCCCAGGGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLLQA*EPRASK
Trigger: CTTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTGCAACCTCAGCTTaGTGTACAAGTGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCATSA*CTSGEA
Trigger: TGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCTGCAATTTCACCTaGAGAGGATCCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCCNFT*RGSTWS
Trigger: AGACCAAGTGGATCCTCTTCAGGTGAAATTGCAGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCTGCAATTTCACCTaGAGAGGATCCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCCNFT*RGSTWS
Trigger: AGACCAAGTGGATCCTCTTCAGGTGAAATTGCAGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATCTGTCAACCAGCTaGGCAAAGGCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYLSTS*AKALRH
Trigger: ATGCCTTAGAGCCTTTGCTCAGCTGGTTGACAGATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCCTCCTTCTGCTTaGAGCATATCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLPPSA*SISTVA
Trigger: GGCCACAGTGGATATGCTTCAAGCAGAAGGAGGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCCAGCTGCCCAGTaGTTTTCTCTCTATCAGCCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSPAAQ*FSLYQP
Trigger: TGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGCTGCTGCCTTGCTaGGGAGATCAGTCCATCTAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWLLPC*GDQSIY
Trigger: GTAGATGGACTGATCTCCTCAGCAAGGCAGCAGCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTATTTTGGCAGTCTaGGTGCCAACAGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICILAV*VPTGSE
Trigger: CTCGGAACCTGTTGGCACTCAGACTGCCAAAATACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTATTTTGGCAGTCTaGGTGCCAACAGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCILAV*VPTGSE
Trigger: CTCGGAACCTGTTGGCACTCAGACTGCCAAAATACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTTCTGTCTTTGCTaGAACTGGGGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSFCLC*NWGICS
Trigger: GGAGCAAATACCCCAGTTTCAGCAAAGACAGAAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTTCTGTCTTTGCTaGAACTGGGGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFCLC*NWGICS
Trigger: GGAGCAAATACCCCAGTTTCAGCAAAGACAGAAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCCAACAGTGTCACTaGTCAGTTTGTACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVQQCH*SVCTAR
Trigger: ACGAGCAGTACAAACTGATCAGTGACACTGTTGGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGCTCGTACTGTTGTaGTCTCTGAATAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLVLL*SLNSSI
Trigger: GATGCTGCTATTCAGAGATCACAACAGTACGAGCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGCTCGTACTGTTGTaGTCTCTGAATAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLVLL*SLNSSI
Trigger: GATGCTGCTATTCAGAGATCACAACAGTACGAGCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTCTCCACATGTGCTaGAGATTTCCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPLHMC*RFPHGD
Trigger: GTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLPAAV*AAHDPQ
Trigger: CTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQKNTI*SSLSWI
Trigger: AATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCATGGTGCAGAGCTTaGTCACAGTGTTATCTAGCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAWCRA*SQCYLA
Trigger: GGCTAGATAACACTGTGATCAAGCTCTGCACCATGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCATGGTGCAGAGCTTaGTCACAGTGTTATCTAGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAWCRA*SQCYLA
Trigger: GGCTAGATAACACTGTGATCAAGCTCTGCACCATGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGTTCTGAGTCCAGATaGCTCTCTGCGTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSESR*LSASSS
Trigger: GCTAGAAGACGCAGAGAGTCATCTGGACTCAGAACT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTTCTGAGTCCAGATaGCTCTCTGCGTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSESR*LSASSS
Trigger: GCTAGAAGACGCAGAGAGTCATCTGGACTCAGAACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAAATCTCCAGTTCTaGGTCCAGATGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGNLQF*VQMTLC
Trigger: GCAGAGAGTCATCTGGACTCAGAACTGGAGATTTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPAKHP*TGLKTV
Trigger: TACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPAKHP*TGLKTV
Trigger: TACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGATCGTTTCAGGACCTaGACTGTGCCGGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDRFRT*TVPVLF
Trigger: AAAGAGAACCGGCACAGTTCAGGTCCTGAAACGATC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATCAGTTCTCTGCCTaGTCGTTTCAGGACCTGAAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNQFSA*SFQDLN
Trigger: GTTCAGGTCCTGAAACGATCAGGCAGAGAACTGATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTATATGTCTTGGTaGCCCTGTCCACGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSYMSW*PCPRQV
Trigger: AACCTGACGTGGACAGGGTCACCAAGACATATAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTTATATGTCTTGGTaGCCCTGTCCACGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSYMSW*PCPRQV
Trigger: AACCTGACGTGGACAGGGTCACCAAGACATATAAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCATCGATAAACTCCTaGCGTGTTATCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPSINS*RVIFPS
Trigger: GGATGGGAAGATAACACGTCAGGAGTTTATCGATGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTTTTGCATGGCTCTaGAGATGGGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPFAWL*RWGISP
Trigger: TGGAGATATTCCCCATCTTCAGAGCCATGCAAAAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTCCAGTTGCCAGGTaGACTTCTAAGACTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPPVAR*TSKTFS
Trigger: ACTGAAAGTCTTAGAAGTTCACCTGGCAACTGGAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTCCAGTTGCCAGGTaGACTTCTAAGACTTTCAGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPPVAR*TSKTFS
Trigger: ACTGAAAGTCTTAGAAGTTCACCTGGCAACTGGAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTATCAGCCCTTCCTaGACAGCACGGAAAATGCTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSISPS*TARKML
Trigger: TAGCATTTTCCGTGCTGTTCAGGAAGGGCTGATAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGATGCCTCCTGTCTaGAGCTGCCTTATGAGAATA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMMPPV*SCLMRI
Trigger: TATTCTCATAAGGCAGCTTCAGACAGGAGGCATCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCCTCTCTTGGGCCTaGCACAGGTGGTTTACCAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFLSWA*HRWFTS
Trigger: GCTGGTAAACCACCTGTGTCAGGCCCAAGAGAGGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGCTTCTTGTTCTTTaGGGAAAAGCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWLLVL*GKAPFQ
Trigger: CTGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGAGGGGGTCTCCGCTaGTATTTTCCTCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGGGLR*YFPPSM
Trigger: CATTGAGGGAGGAAAATATCAGCGGAGACCCCCTCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATTTCTGGCCATAAATaGAATCCCCCAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGISGHK*NPPSSH
Trigger: GTGGGAACTTGGGGGATTTCATTTATGGCCAGAAAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCACTTAACATCTGGTaGGATGCAATAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPLNIW*DAIILA
Trigger: GGCCAGGATTATTGCATCTCACCAGATGTTAAGTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCTTCCATCTCTACTaGAATCTTCCTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAFHLY*NLPALF
Trigger: GAAAAGGGCAGGAAGATTTCAGTAGAGATGGAAGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAAGCTTTCTCATCTTaGCGCTGGCCTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEAFSS*RWPSIS
Trigger: AGAGATGGAAGGCCAGCGTCAAGATGAGAAAGCTTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAAATCACAAGATTCTaGGCAGGGATGCGTCACCGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQITRF*AGMRHR
Trigger: TCGGTGACGCATCCCTGCTCAGAATCTTGTGATTTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGATCCTTGCTCTTTTaGAACCATTCTCCCTTGACG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRSLLF*NHSPLT
Trigger: CGTCAAGGGAGAATGGTTTCAAAAGAGCAAGGATCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAACTTCTTGTGGCTaGCTGATAACAATCCGATCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGTSCG*LITIRS
Trigger: GGATCGGATTGTTATCAGTCAGCCACAAGAAGTTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATGCCTTCAACAGCTaGGCAGGAACTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINAFNS*AGTSCG
Trigger: GCCACAAGAAGTTCCTGCTCAGCTGTTGAAGGCATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGGCTCTCAGATCTTaGAGTTTGCCTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQALRS*SLPCSS
Trigger: GGAACTGCAAGGCAAACTTCAAGATCTGAGAGCCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCAGAGTCTTGACCTaGACTTCTTGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICRVLT*TSCWTC
Trigger: GCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCTGGCTCCAGTTTaGTGCCTGAGAGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLAPV*CLRGPL
Trigger: TAGAGGTCCTCTCAGGCATCAAACTGGAGCCAGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCACTAGCTTCACCTaGCGCTGCTTTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFTSFT*RCFRKS
Trigger: GGACTTCCTAAAGCAGCGGCAGGTGAAGCTAGTGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGGCTTTGGTATTCTTaGCATCTGGAGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRLWYS*HLESTS
Trigger: GGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGGCTTTGGTATTCTTaGCATCTGGAGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRLWYS*HLESTS
Trigger: GGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCAAGATCGTATGCTaGCTGATCCAGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIKIVC*LIQGMS
Trigger: ACTCATTCCCTGGATCAGGCAGCATACGATCTTGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTGCAGCATCAGCCTaGAGTGTGTTCTTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCAASA*SVFLAS
Trigger: ACTAGCTAAGAACACACTGCAGGCTGATGCTGCACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACATCTGACTCACACTaGACTGGCTGTCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTSDSH*TGCPDS
Trigger: GGAATCAGGACAGCCAGTGCAGTGTGAGTCAGATGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACATCTGACTCACACTaGACTGGCTGTCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITSDSH*TGCPDS
Trigger: GGAATCAGGACAGCCAGTGCAGTGTGAGTCAGATGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGACCAGCTCATCCTaGAGGCGCATGACCCTAAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVTSSS*RRMTLK
Trigger: CTTTAGGGTCATGCGCCTGCAGGATGAGCTGGTCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCGCTCCAGTTTCATCTaGATCTCTTCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRSSFI*ISSTQE
Trigger: CTCTTGGGTAGAAGAGATGCAGATGAAACTGGAGCG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCATTACCCCACTCTaGTCGCTCCAGTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVITPL*SLQFHL
Trigger: CAGATGAAACTGGAGCGAGCAGAGTGGGGTAATGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCATTACCCCACTCTaGTCGCTCCAGTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVITPL*SLQFHL
Trigger: CAGATGAAACTGGAGCGAGCAGAGTGGGGTAATGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACACTGGTATGGATATaGTGCTGTGTTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTLVWI*CCVSNC
Trigger: GCAGTTGGAAACACAGCAGCATATCCATACCAGTGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCFIH*NWDWTA
Trigger: TGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSCFIH*NWDWTA
Trigger: TGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTTCACAGATAAAGTaGTCTTCAGCACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPSQIK*SSAHGL
Trigger: CAGACCATGTGCTGAAGAGCACTTTATCTGTGAAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGACTGTTCCACCCTaGTGGCCATTTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKTVPP*WPFQWP
Trigger: AGGCCATTGAAATGGCCAGCAGGGTGGAACAGTCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGACTGTTCCACCCTaGTGGCCATTTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKTVPP*WPFQWP
Trigger: AGGCCATTGAAATGGCCAGCAGGGTGGAACAGTCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAATCCTCCTGTGTGTaGTCCTGCTCTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKSSCV*SCSAIL
Trigger: GAGGATTGCAGAGCAGGAGCACACACAGGAGGATTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGATCTCAAATGCTaGAAATCCTCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSDLKC*KSSCVC
Trigger: GCACACACAGGAGGATTTGCAGCATTTGAGATCTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRSDLK*CKSSCV
Trigger: CACACAGGAGGATTTGCAGCATTTGAGATCTGACCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAACCTGATGGAGACTaGTGGAGAAAGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEPDGD*WRKTLH
Trigger: ATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCACTCTACTATCCTCTaGCTGGCCAGGCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHSTIL*LARLHH
Trigger: ATGATGAAGCCTGGCCAGGCAGAGGATAGTAGAGTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACTCTACTATCCTCTaGCTGGCCAGGCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHSTIL*LARLHH
Trigger: ATGATGAAGCCTGGCCAGGCAGAGGATAGTAGAGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTTGTGTATTTCTTaGCAGAGTAGACACCCAACC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLCIS*QSRHPT
Trigger: GGTTGGGTGTCTACTCTGGCAAGAAATACACAAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCCTTCTCAATGTCTaGAGATGCACTAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGLLNV*RCTSVR
Trigger: TCTCACACTAGTGCATCTGCAGACATTGAGAAGGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCCTTCTCAATGTCTaGAGATGCACTAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGLLNV*RCTSVR
Trigger: TCTCACACTAGTGCATCTGCAGACATTGAGAAGGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGTTGTCAACTCTTCTaGCAGAACCTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGCQLF*QNLLLQ
Trigger: TTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLQCSF*LSHPVA
Trigger: TGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKSLWF*CRAGSS
Trigger: AGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKSLWF*CRAGSS
Trigger: AGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCCAGCTCTGTCGCTaGTTTACTCTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCQLCR*FTLLCL
Trigger: GAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCCAGCTCTGTCGCTaGTTTACTCTTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICQLCR*FTLLCL
Trigger: GAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQAPEN*SIPGRL
Trigger: TAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCTCGTAGAGCCTaGGTCTGCTTCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSRRA*VCFSSA
Trigger: GGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLELQDC*LPYAYY
Trigger: ATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAGAGAAGCTTCCTTaGCGCTTTAGCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSEKLP*RFSKEF
Trigger: GAACTCCTTGCTAAAGCGGCAAGGAAGCTTCTCTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGAGAAGCTTCCTTaGCGCTTTAGCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSEKLP*RFSKEF
Trigger: GAACTCCTTGCTAAAGCGGCAAGGAAGCTTCTCTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTGGCCTAGCAACATaGTCAGATGAGAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITGLAT*SDESPI
Trigger: GATTGGGCTCTCATCTGAGCATGTTGCTAGGCCAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLRLSN*LLQQSR
Trigger: TCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLRLSN*LLQQSR
Trigger: TCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTGCCAGTTTGCCCTaGAGCACTGAGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSASLP*STEAEL
Trigger: CAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGCTCTCCTTTTCTTaGTGCTGGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLSFS*CWSWSC
Trigger: ACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGAGCTTCTTTAGGTTaGTCTCCTTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGASLG*SPFLAA
Trigger: AGCAGCAAGAAAAGGAGAGCAACCTAAAGAAGCTCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTTCCATGAACTGCTaGAGCTTGTTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSMNC*SLLESC
Trigger: GCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTTCCATGAACTGCTaGAGCTTGTTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSMNC*SLLESC
Trigger: GCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGTTTTCCATGAACTaGTGCAGCTTGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLFSMN*CSLLES
Trigger: GCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGAGCTCCTGGATCTaGTGGGAAAAATGTGCAATA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVSSWI*WEKCAI
Trigger: TATTGCACATTTTTCCCAGCAGATCCAGGAGCTCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSVVTR*SRVSRF
Trigger: GAACCTAGATACTCTGGAGCACCTGGTTACTACACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGGAATTCATCCAACTaGTCCTGGCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRNSSN*SWQVDA
Trigger: TGCATCCACTTGCCAGGAGCAGTTGGATGAATTCCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGGAATTCATCCAACTaGTCCTGGCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRNSSN*SWQVDA
Trigger: TGCATCCACTTGCCAGGAGCAGTTGGATGAATTCCG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTATCCGTTTACACTaGCTACAGAGCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGIRLH*LQSFLQ
Trigger: CTGTAGGAAGCTCTGTAGGCAGTGTAAACGGATACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSADSSS*FWRATV
Trigger: TACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIADSSS*FWRATV
Trigger: TACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCATAAACTGGACCTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSINWT*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCATAAACTGGACCTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSINWT*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMLLPS*FKFLQH
Trigger: ATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTGCTCATGCTGCTaGCTTCGTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCSCC*LRASNS
Trigger: GGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCTGCTCATGCTGCTaGCTTCGTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSCSCC*LRASNS
Trigger: GGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCAGCTGCTCATGCTaGTGCCTTCGTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSCSC*CLRASN
Trigger: ATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCAGCTGCTCATGCTaGTGCCTTCGTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSCSC*CLRASN
Trigger: ATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATCCTTGAGGTACTaGTCACCAATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSLRY*SPMSSE
Trigger: CTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAACATTTGCTGGAATTaGTGGGTGCTGGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNICWN*WVLARA
Trigger: AGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTCATCAAACATTTaGTGGAATTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSSNI*WNCWVL
Trigger: CAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCQWLP*HLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICQWLP*HLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCCTCCTGCAGTTGTaGAATTCTTTGTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLLQL*NSLCNL
Trigger: AAGGTTGCACAAAGAATTGCACAACTGCAGGAGGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGACTGGGCTATTCTaGCTCCTTCTGCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILTGLF*LLLLEA
Trigger: TGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGACTGGGCTATTCTaGCTCCTTCTGCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLTGLF*LLLLEA
Trigger: TGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSRLSS*PVIFSL
Trigger: TAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINLVAS*RACSKV
Trigger: AACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGATCAGTTTGTACTaGTCGTTGGCATCAGACACA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLISLY*SLASDT
Trigger: TGTGTCTGATGCCAACGAGCAGTACAAACTGATCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCACTCGGTTTTCTCCTaGAGTACAGCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHSVFS*STAFCS
Trigger: GGAGCAGAAAGCTGTACTGCAGGAGAAAACCGAGTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGGATTCCCTTAGTTaGCTCATCTCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMDSLS*LISSCC
Trigger: GCAGCAGGAAGAGATGAGGCAACTAAGGGAATCCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGGATTCCCTTAGTTaGCTCATCTCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMDSLS*LISSCC
Trigger: GCAGCAGGAAGAGATGAGGCAACTAAGGGAATCCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTTCAAAGGACGGCTaGAGTTTCTCCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASKDG*SFSSST
Trigger: CGTGGAGCTGGAGAAACTGCAGCCGTCCTTTGAAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLSAP*DLPMSS
Trigger: GGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCCAGATCCTTGTCTaGTCCCTGCGATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISQILV*SLRSSN
Trigger: ATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCCAGATCCTTGTCTaGTCCCTGCGATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSQILV*SLRSSN
Trigger: ATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCCTGGATTTCTTTTaGAGCCAGATCCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVLDFF*SQILVC
Trigger: GCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCCTGGATTTCTTTTaGAGCCAGATCCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVLDFF*SQILVC
Trigger: GCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTGGTCAGGAGAGCTaGCATGTCATACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGGQES*HVIPEL
Trigger: AAGTTCTGGTATGACATGGCAGCTCTCCTGACCACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGTGGTCAGGAGAGCTaGCATGTCATACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGGQES*HVIPEL
Trigger: AAGTTCTGGTATGACATGGCAGCTCTCCTGACCACC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGKNQI*SKDSNE
Trigger: TTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTACTGCACAGCAGCCTaGATGGCATCCTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYCTAA*MASSSF
Trigger: AAAACTCGAGGATGCCATGCAGGCTGCTGTGCAGTA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTACTGCACAGCAGCCTaGATGGCATCCTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYCTAA*MASSSF
Trigger: AAAACTCGAGGATGCCATGCAGGCTGCTGTGCAGTA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGGACTGCAGCTGTTaGTCCCTCTCCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVDCSC*SLSSVF
Trigger: GAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATTCTGGAATTCTGTTaGCAGGCTGAGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSILEFC*QAEGLF
Trigger: GAAGAGGCCCTCAGCCTGGCAACAGAATTCCAGAAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSIDR*TTFSHR
Trigger: TCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSIDR*TTFSHR
Trigger: TCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCGCTCTACAGACTTaGCACAGACAGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVALQT*HRQYPI
Trigger: AATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAGGACCTGAACTGTaGCGGTTCTCTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISGPEL*RFSFPV
Trigger: AACTGGGAAAGAGAACCGGCACAGTTCAGGTCCTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWCHLC*PQSVLC
Trigger: GCAGAGAACTGATTGAGGGCAGCAGAGATGACACCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCSSRL*LETESL
Trigger: TAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCTGTTTTAAGGCTTaGTCAAGCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSACFKA*SSRLCL
Trigger: CAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCTGTTTTAAGGCTTaGTCAAGCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIACFKA*SSRLCL
Trigger: CAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAKCLF*FRKPLQ
Trigger: TTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGATGGTGATCCAGTaGTTGATGGTCGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMMVIQ*LMVVMQ
Trigger: CTGCATCACGACCATCAAGCACTGGATCACCATCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGATTCAAGGACTTTCTaGTACCACTGCGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDSRTF*YHCGIS
Trigger: AGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAATGAGGCCCTTTTaGATGGCTCTGAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISMRPF*MALKMG
Trigger: CCCCATCTTCAGAGCCATGCAAAAGGGCCTCATTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGATGATACATCTCTaGATCAGGTCCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWMIHL*IRSSKP
Trigger: TGGCTTGCTGGACCTGATGCAGAGATGTATCATCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATTCCCCCTGCCAACTaGTTGACAGGCAACAATTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIPPAN*LTGNNF
Trigger: GAAATTGTTGCCTGTCAAGCAGTTGGCAGGGGGAAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTCACCATTCCCCCTaGCAACTGCTTGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAHHSP*QLLDRQ
Trigger: TTGCCTGTCAAGCAGTTGGCAGGGGGAATGGTGAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTAGATACAATACCTTaGTCTAGAGCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVDTIP*SRASVI
Trigger: AATTACAGATGCTCTAGAGCAAGGTATTGTATCTAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACCGTCTGACCATCTaGAACACTCTGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHRLTI*NTLSFL
Trigger: CAAGAAGGACAGAGTGTTGCAGATGGTCAGACGGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAACTTTTCTGAGCTaGCTGGCCATATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSTFLS*LAISSP
Trigger: TGGTGAAGATATGGCCAGGCAGCTCAGAAAAGTTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCCAAAACCTTCAATaGAGAAGCAAAGTCTACTTT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFQNLQ*RSKVYF
Trigger: AAAGTAGACTTTGCTTCTGCATTGAAGGTTTTGGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTACTGAAATCTTCCTaGCCTTTTCTGCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLKSS*PFLPFP
Trigger: GGGAAAAGGCAGAAAAGGGCAGGAAGATTTCAGTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCATTTGGACACTTTaGTCTCCACCCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLIWTL*SPPISL
Trigger: GAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAACTGCTGCTTCCCTaGTCATTTGGACACTTTGCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHELLLP*SFGHFA
Trigger: AGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATTCTGAGTTGCTCTaGAAGGCTCTGGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHSELL*KALGLH
Trigger: GTGTAAACCCAGAGCCTTGCAGAGCAACTCAGAATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTTGCAGTTCCTTGTaGCGATTTAACACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPCSSL*RFNTVA
Trigger: GGCCACAGTGTTAAATCGGCACAAGGAACTGCAAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCAGTCTGGATCTCTaGTTGGAAGCTCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSLDL*LEALLY
Trigger: GTAAAGGAGAGCTTCCAAGCAGAGATCCAGACTGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGAATGTTTTCTTTTaGACTCGGTCCCGCTCATCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVNVFF*TRSRSS
Trigger: AGATGAGCGGGACCGAGTGCAAAAGAAAACATTCAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000238555.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTGGAAACGCATCCTaGCCTTCTCTCTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCGNAS*PSLWVH
Trigger: ATGTACCCAGAGAGAAGGGCAGGATGCGTTTCCACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGAATGTTTTCTTTTaGACTCGGTCCCGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVNVFF*TRSRSS
Trigger: GGATGAGCGGGACCGAGTGCAAAAGAAAACATTCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCAGCACAGAATCCTaGCTTTTCCGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSTES*LFRFFC
Trigger: GCAGAAGAAGCGGAAAAGCCAGGATTCTGTGCTGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCAGCACAGAATCCTaGCTTTTCCGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSTES*LFRFFC
Trigger: GCAGAAGAAGCGGAAAAGCCAGGATTCTGTGCTGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSESTRL*YSCHLE
Trigger: CTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCCCGTAGGATCTaGAGATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSRRI*RSTCSC
Trigger: GCAGCTGCAGGTGGATCTCCAGATCCTACGGGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSTLV*ICCCVS
Trigger: GGAAACACAGCAGCATATCCATACCAGTGTGGAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTCAGCTGTGGCTCTaGAGACAAATTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVQLWL*RQICAG
Trigger: GCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTCAGCTGTGGCTCTaGAGACAAATTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVQLWL*RQICAG
Trigger: GCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVCLAG*FSSDNT
Trigger: GGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVCLAG*FSSDNT
Trigger: GGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATTGCAACTGGGACTaGACAGCAGCACTATATGCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHCNWD*TAALYA
Trigger: GGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATTGCAACTGGGACTaGACAGCAGCACTATATGCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHCNWD*TAALYA
Trigger: GGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCATCCATTGCAACTaGGACTGGACAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFIHCN*DWTAAL
Trigger: TAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTCCTTTTCATCCATaGAGTCCTGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAPFHP*SPEADP
Trigger: AGGATCTGCTTCAGGACTCCATGGATGAAAAGGAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTCCTTTTCATCCATaGAGTCCTGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAPFHP*SPEADP
Trigger: AGGATCTGCTTCAGGACTCCATGGATGAAAAGGAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTCCCAACAAGACTaGCAACGGAACTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHISQQD*QRNSWT
Trigger: AGTCCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTCCCAACAAGACTaGCAACGGAACTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLISQQD*QRNSWT
Trigger: AGTCCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGCTCTTCAGCACATaGTCTGGATTGCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVLFST*SGLRGF
Trigger: AAAGCCACGCAATCCAGACCATGTGCTGAAGAGCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGCTCTTCAGCACATaGTCTGGATTGCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVLFST*SGLRGF
Trigger: AAAGCCACGCAATCCAGACCATGTGCTGAAGAGCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCGGTAGTCACAGATaGCCTTCACAGATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAGSHR*PSQIKC
Trigger: GCACTTTATCTGTGAAGGCCATCTGTGACTACCGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCGGTAGTCACAGATaGCCTTCACAGATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAGSHR*PSQIKC
Trigger: GCACTTTATCTGTGAAGGCCATCTGTGACTACCGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCCTCCTTATTCGGTaGGGGAATGAGAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGLLIR*GNEKAN
Trigger: GTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCCTCCTTATTCGGTaGGGGAATGAGAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGLLIR*GNEKAN
Trigger: GTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGTTAATGTGTAGCTaGTGCCAAAGGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVLMCS*CQRAIT
Trigger: GGTGATGGCCCTTTGGCACCAGCTACACATTAACAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTTCATAACCTGGTaGCACTCTCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFFITW*HSPGAK
Trigger: CTTAGCACCAGGAGAGTGCCACCAGGTTATGAAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGGTTTTTCATAACCTaGTGGCACTCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRFFIT*WHSPGA
Trigger: AGCACCAGGAGAGTGCCACCAGGTTATGAAAAACCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGGTTTTTCATAACCTaGTGGCACTCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRFFIT*WHSPGA
Trigger: AGCACCAGGAGAGTGCCACCAGGTTATGAAAAACCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCAGGTGCTGGAAGTaGGCTTTACAAGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIRCWK*ALQAST
Trigger: GGTGGAAGCTTGTAAAGCCCACTTCCAGCACCTGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGATTTCATCAGGTGCTaGAAGTGGGCTTTACAAGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDFIRC*KWALQA
Trigger: AGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLGAG*RLNLFE
Trigger: CTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTCAGTCTTGGAGCTaGCTGGAGACTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCQSWS*LETEFV
Trigger: AACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATCTCTGTCAGTCTTaGAGCTGGCTGGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHLCQS*SWLETE
Trigger: TTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPDGDC*RKTLHF
Trigger: GAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTAAGGTGGTCCGATaGGACTCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCKVVR*DSRAER
Trigger: CCTCTCAGCTCTGGAGTCCCATCGGACCACCTTACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTACTATCCTCTGCCTaGCCAGGCTTCATCATTTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLSSA*PGFIIS
Trigger: GGAAATGATGAAGCCTGGCCAGGCAGAGGATAGTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGCTGCTCCAAAATaGCCTTCTCAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPAAPK*PSQCLQ
Trigger: CTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPSESL*PCLAKK
Trigger: CTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGAGCTGCTGGAGTTaGTTTGCAGAACCATCACAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWSCWS*FAEPSQ
Trigger: TTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCGCTTTGGAGCTGCTaGAGTTGGTTTGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLWSC*SWFAEP
Trigger: TGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCGCTTTGGAGCTGCTaGAGTTGGTTTGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLWSC*SWFAEP
Trigger: TGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGTGGCAAATGAGGTaGAATGACTCTGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQWQMR*NDSECH
Trigger: GTGACATTCAGAGTCATTCCACCTCATTTGCCACTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGGCTCAGCTTGGTCTaGTTCTCTTCCAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGLSLV*FSSRNP
Trigger: AGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCAAGTCTCCTTTGTaGGAAATGACATCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLKSPL*EMTSSE
Trigger: CTCTGAGGATGTCATTTCCCACAAAGGAGACTTGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTCAACTTCCCTTATaGACTGCAGCAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVQLPL*TAAGSP
Trigger: TGGAGAGCCTGCTGCAGTCCATAAGGGAAGTTGAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRVTMS*VASKLL
Trigger: GAGCAGCTTGGAAGCCACCCATGACATGGTCACTCG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTTTTCTTGCTGCTaGAGCTGGAGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFSCC*SWSCWK
Trigger: CTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCTTTTCTTGCTGCTaGAGCTGGAGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFSCC*SWSCWK
Trigger: CTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAAACATCTCAGCCTaGGGCAGGAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSNISA*GRSFFR
Trigger: CCTAAAGAAGCTCCTGCCCCAGGCTGAGATGTTTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAAACATCTCAGCCTaGGGCAGGAGCTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISNISA*GRSFFR
Trigger: CCTAAAGAAGCTCCTGCCCCAGGCTGAGATGTTTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTGCTGCAGCTTGTTaGAGAGCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTAAAC*RAAQTS
Trigger: AGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTGCTGCAGCTTGTTaGAGAGCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTAAAC*RAAQTS
Trigger: AGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCAAAGTGAGCTCCTaGATCTGCTGGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAKVSS*ICWEKC
Trigger: ACATTTTTCCCAGCAGATCCAGGAGCTCACTTTGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCAAAGTGAGCTCCTaGATCTGCTGGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAKVSS*ICWEKC
Trigger: ACATTTTTCCCAGCAGATCCAGGAGCTCACTTTGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATCCAACTGCTCCTaGCAAGTGGATGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSNCS*QVDASF
Trigger: GAAAGATGCATCCACTTGCCAGGAGCAGTTGGATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAACCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEPVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAACCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEPVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTATGGAACCTGTTTTaGCTTGGGAATCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVWNLF*LGNQEL
Trigger: CAGCTCCTGATTCCCAAGCCAAAACAGGTTCCATAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTATGGAACCTGTTTTaGCTTGGGAATCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVWNLF*LGNQEL
Trigger: CAGCTCCTGATTCCCAAGCCAAAACAGGTTCCATAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGATCTTTGCAGGTGTaGTATCCGTTTACACTGCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRSLQV*YPFTLP
Trigger: AGGCAGTGTAAACGGATACCACACCTGCAAAGATCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGTTGGAGACAAAGTaGCATCCATGGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWLETK*HPWLSG
Trigger: TCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTACTTGGCTGGCAGATaGAGACATATCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYLAGR*RHISRT
Trigger: GGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTACTTGGCTGGCAGATaGAGACATATCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYLAGR*RHISRT
Trigger: GGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATAGCTTGGTCAATTTaGCTGGAACGGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIAWSI*LERELS
Trigger: GCTCAACTCCCGTTCCAGCCAAATTGACCAAGCTAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATAGCTTGGTCAATTTaGCTGGAACGGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIAWSI*LERELS
Trigger: GCTCAACTCCCGTTCCAGCCAAATTGACCAAGCTAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGTCGCTGTCCAATaGCCTTCACCTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSVAVQ*PSPFLI
Trigger: TATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGIAGC*QELPEV
Trigger: GACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCAAACATTTGCTaGAATTGCTGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSNIC*NCWVLA
Trigger: TGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAAGATCTTCCCAGTaGCTTCTGAGTTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLRSSQ*LLSSTN
Trigger: GTTGGTTGAACTCAGAAGCCACTGGGAAGATCTTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTAGCTCAGACATCTTaGACTTGCACTCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVAQTS*TCTRLS
Trigger: GGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISIRSI*SIFYES
Trigger: GGACTCGTAGAAGATGCTCCAGATGGATCGGATGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSIRSI*SIFYES
Trigger: GGACTCGTAGAAGATGCTCCAGATGGATCGGATGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTAGCTTGTTTTCCATaGTCAGGCAGCTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLACFP*SGSYCS
Trigger: TGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTCGGACTCGACAGTaGAACTGCCCAATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSRTRQ*NCPIPS
Trigger: AGAGGGGATTGGGCAGTTCCACTGTCGAGTCCGAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCTCTAGCTGCTCCTaGCGAACTTTCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSSCS*RTFPRS
Trigger: AGAGCGAGGGAAAGTTCGCCAGGAGCAGCTAGAGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCATCTAGGAGTCGCTaGAGCAACTTCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSRSR*SNFCSW
Trigger: CCAAGAACAGAAGTTGCTCCAGCGACTCCTAGATGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATCTAGGAGTCGCTaGAGCAACTTCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSRSR*SNFCSW
Trigger: CCAAGAACAGAAGTTGCTCCAGCGACTCCTAGATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCAGCTCAGCTGACTaGGCTATTCTGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASSAD*AILPPS
Trigger: AGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGSAVS*NCLART
Trigger: GGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGCTGGTGTATTTTaGCAGTCTGAGTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSAGVF*QSECQQ
Trigger: CTGTTGGCACTCAGACTGCCAAAATACACCAGCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCATCAGCTTCCGCTTaGTTTCAGCAACCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPSASA*FQQPKL
Trigger: TAGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGGCATGTTGGAACTaGCCCAGGGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKACWN*PRAKRA
Trigger: TGCTCTCTTGGCCCTGGGCCAGTTCCAACATGCCTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSKAC*NWPRAK
Trigger: CTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTCAATTTCACTGTaGAAACCCTGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSISL*KPWACC
Trigger: GCAGCAGGCCCAGGGTTTCCACAGTGAAATTGAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTTCAATTTCACTGTaGAAACCCTGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSISL*KPWACC
Trigger: GCAGCAGGCCCAGGGTTTCCACAGTGAAATTGAAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTTGGCTCTCAGCTaGGAATGTAGTTCCATATGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLALS*ECSSIC
Trigger: ACATATGGAACTACATTCCCAGCTGAGAGCCAAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCSKSG*EERRCL
Trigger: TAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACTCCAACAGCATATaGACCGTGTCCCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHSNSI*TVSRNS
Trigger: AGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTATGTTCTGAGGGATaGGCTCCTGATCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLCSEG*APDPAG
Trigger: TCCAGCGGGATCAGGAGCCCATCCCTCAGAACATAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGAGAGGATTGGCATaGGGGGAGGTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVRGLA*GEVWVD
Trigger: ATCAACCCACACCTCCCCCCATGCCAATCCTCTCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCATCAAAGTCAAAGTTaGCAAATTCTTTCAATTCCG +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHQSQS*QILSIP
Trigger: CGGAATTGAAAGAATTTGCCAACTTTGACTTTGATG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTATCTTCCCATCCTaGTCCTTGTCAATACGCCGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVIFPS*SLSIRR
Trigger: CCGGCGTATTGACAAGGACCAGGATGGGAAGATAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTGCATCAGTTGTTaGCCGATAGGCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGICISC*PIGILV
Trigger: AACAAGGATGCCTATCGGCCAACAACTGATGCAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGGAGAAGAAGGCATaGATGTACAGCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLEKKA*MYSCGY
Trigger: GTAACCACAGCTGTACATCCATGCCTTCTTCTCCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGGAGAAGAAGGCATaGATGTACAGCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLEKKA*MYSCGY
Trigger: GTAACCACAGCTGTACATCCATGCCTTCTTCTCCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGKSCC*CHQQGM
Trigger: CATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACAAGGCCTGTGTCTTaGTCAATGAGGCCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTRPVS*SMRPFC
Trigger: GCAAAAGGGCCTCATTGACCAAGACACAGGCCTTGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAGACATGATAATCTaGGATTCCAGGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPDMII*DSRSTR
Trigger: CCTTGTGCTCCTGGAATCCCAGATTATCATGTCTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGTGTCCTGTTCTTaGATCTACTATGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSVSCS*IYYATS
Trigger: GCTGGTGGCATAGTAGATCCAAGAACAGGACACAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAAGACTCACAGGTCTaGGAGTCAAAGAAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKDSQV*ESKKPR
Trigger: TCGGGGCTTCTTTGACTCCCAGACCTGTGAGTCTTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTCTTGTGGTAATTTaGGCAGCCATGTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCLVVI*AAMSPL
Trigger: CAAAGGAGACATGGCTGCCCAAATTACCACAAGACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTCCACAAGACTTGTaGTCTGCTTTGCTATCCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCPQDL*SALLSS
Trigger: TGAGGATAGCAAAGCAGACCACAAGTCTTGTGGACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTCTGCAAGGCTCTaGGTTTACACCTTCAATCCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCSARL*VYTFNP
Trigger: GGGATTGAAGGTGTAAACCCAGAGCCTTGCAGAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACTTCTGAAGATTTTTaGCATCTTTCTCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTSEDF*HLSLMP
Trigger: AGGCATTAGAGAAAGATGCCAAAAATCTTCAGAAGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACAGCACTCTGGAGGTaGAGGAATCTGGAACTCCAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITALWR*RNLELQ
Trigger: TTGGAGTTCCAGATTCCTCCACCTCCAGAGTGCTGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACAGCACTCTGGAGGTaGAGGAATCTGGAACTCCAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTALWR*RNLELQ
Trigger: TTGGAGTTCCAGATTCCTCCACCTCCAGAGTGCTGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACAGTTCCTTTCTGCTaGGTTATCAAGCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTVPFC*VIKQVS
Trigger: GCTCACCTGCTTGATAACCCAGCAGAAAGGAACTGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCATAGAGATCATTaGTGTGCTTGCGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLHRDH*CACGPS
Trigger: TGAAGGTCCGCAAGCACATCAATGATCTCTATGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGGATTGCCATCTGTaGTGTCATCATTGCGGATAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWDCHL*CHHCGY
Trigger: ATATCCGCAATGATGACATCACAGATGGCAATCCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAAAGTTGGTGCATTTaGCTCCTGTGTAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKSWCI*LLCNQL
Trigger: CAGCTGGTTACACAGGAGTCAAATGCACCAACTTTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGATCCAGGGAATGAGTaGGTCCACTCGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDPGNE*VHSALV
Trigger: TACCAAAGCCGAGTGGACTCACTCATTCCCTGGATC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTACATAATGACATCTaGCTCACACTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVHNDI*LTLHWL
Trigger: CAGCCAGTGCAGTGTGAGTCAGATGTCATTATGTAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTTCTGCTTTCAGGTaGGTAGTGGTTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGSAFR*VVVKVE
Trigger: CTCTACTTTAACCACTACTCACCTGAAAGCAGAACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGGTAGAAGAAGAATaGGTCGTCTTGTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEVEEE*VVLFRG
Trigger: ACCCCTGAACAAGACGACTCATTCTTCTTCTACCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGGTAGAAGAAGAATaGGTCGTCTTGTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEVEEE*VVLFRG
Trigger: ACCCCTGAACAAGACGACTCATTCTTCTTCTACCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTAGGTTTTCTTGGCTaGGATATTGGGATTACTGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVGFLG*DIGITV
Trigger: GACAGTAATCCCAATATCTCAGCCAAGAAAACCTAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEVSQK*LQVSGI
Trigger: GATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACGGAACTCTTGGACTaGATAAGCTGCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTELLD*ISCSFS
Trigger: TGAAAAGGAGCAGCTTATTCAGTCCAAGAGTTCCGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACGGAACTCTTGGACTaGATAAGCTGCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTELLD*ISCSFS
Trigger: TGAAAAGGAGCAGCTTATTCAGTCCAAGAGTTCCGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLRGFS*TMVFDL
Trigger: GAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATGAGAAAGCAAACTaGTGGAACCATTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNEKAN*WNHCLV
Trigger: AACGAGGCAATGGTTCCATCAGTTTGCTTTCTCATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGTGTGATGGCATCTaGAGAGGAAATCATGCGGCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLCDGI*RGNHAA
Trigger: CGCCGCATGATTTCCTCTTCAGATGCCATCACACAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCGGAGAGCATCACTaGTATATTTTACATGCTGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAGEHH*YILHAE
Trigger: CTCAGCATGTAAAATATATCAGTGATGCTCTCCGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCTSVR*GSCSLC
Trigger: ACACAAGGAACAACTACCTCATCTCACACTAGTGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCCTTCTCTCCTTCTaGAAGCTTATGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFLLSF*KLMAML
Trigger: AAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGACAGCAGTGGCAAATaGGGTGGAATGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDSSGK*GGMTLN
Trigger: ATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGACAGCAGTGGCAAATaGGGTGGAATGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDSSGK*GGMTLN
Trigger: ATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTLQCL*QQWQMR
Trigger: CCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWFTST*PSVAAK
Trigger: CTTAGCTGCCACTGATGGTCATGTAGATGTGAACCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGACAGCAATTCTTGGTaGCGAGCCTTCATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDSNSW*RAFISS
Trigger: TGAGCTAATGAAGGCTCGTCACCAAGAATTGCTGTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGACAGCAATTCTTGGTaGCGAGCCTTCATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDSNSW*RAFISS
Trigger: TGAGCTAATGAAGGCTCGTCACCAAGAATTGCTGTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCAACATGCTCAGATaGGAGCCCAATCGTATACAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSNMLR*EPNRIH
Trigger: GTGTATACGATTGGGCTCTCATCTGAGCATGTTGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCAACATGCTCAGATaGGAGCCCAATCGTATACAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISNMLR*EPNRIH
Trigger: GTGTATACGATTGGGCTCTCATCTGAGCATGTTGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHESVVS*IGLQSR
Trigger: CCTGGACTGTAGGCCTATTCAAGAAACTACAGATTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGAGTGATGCCACCTaGTCCCTTTCTAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSESDAT*SLSRFC
Trigger: ACAAAACCTAGAAAGGGATCAGGTGGCATCACTCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGFCFP*TAAACW
Trigger: CCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTTTCTGCTTCTTGTaGGTTGGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVFCFL*VGIGLQ
Trigger: CTGAAGACCTATCCCAACTCACAAGAAGCAGAAAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTCCCATCGGGAATTaGGGTCCTCTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFPIGN*GPLAFS
Trigger: AGAAAATGCAAGAGGACCTCAATTCCCGATGGGAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTCCCATCGGGAATTaGGGTCCTCTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFPIGN*GPLAFS
Trigger: AGAAAATGCAAGAGGACCTCAATTCCCGATGGGAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTCAACCCACTTCTaGCTGATGCTTTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSTHF*LMLCRS
Trigger: AGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLTNEQ*EFLAQR
Trigger: ACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTACTGCTCACCAATaGGCAGTGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGTAHQ*AVRVLG
Trigger: GCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTCCTGGAACTCCTTaGGCCTCTGAGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFPGTP*ASESFL
Trigger: AAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTCCTGGAACTCCTTaGGCCTCTGAGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFPGTP*ASESFL
Trigger: AAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGCTCTAAGGCATCTTaGAATTTCCCACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGSKAS*NFPQCN
Trigger: GTTACATTGTGGGAAATTTCAAGATGCCTTAGAGCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCAGATGGAGGCTTCTaGTTGGCTATGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNADGGF*LAMSSS
Trigger: TGAGGAGCTCATAGCCAATCAGAAGCCTCCATCTGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCTTCTGTCTTTGCTaGAACTGGGGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFCLC*NWGICS
Trigger: GGAGCAAATACCCCAGTTTCAGCAAAGACAGAAGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCCAACAGTGTCACTaGTCAGTTTGTACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVQQCH*SVCTAR
Trigger: ACGAGCAGTACAAACTGATCAGTGACACTGTTGGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCCAACAGTGTCACTaGTCAGTTTGTACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVQQCH*SVCTAR
Trigger: ACGAGCAGTACAAACTGATCAGTGACACTGTTGGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTCGTACTGTTGTaGTCTCTGAATAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLVLL*SLNSSI
Trigger: GATGCTGCTATTCAGAGATCACAACAGTACGAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCTGCACCTGCAGCTaGGCAGTAGTCTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFCTCS*AVVWSC
Trigger: ACAAGACCAGACTACTGCTCAGCTGCAGGTGCAGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTCCCCACGGTGACTaGAGAGCTCATCCATTGAAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFPHGD*RAHPLN
Trigger: ATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQKNTI*SSLSWI
Trigger: AATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYPGCL*WWSGEL
Trigger: CAGCTCTCCTGACCACCATCAAAGACACCCAGGATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTCCCAGAGGTGCTTaGGTTCTGTCAGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSPRGA*VLSVVL
Trigger: GAGAACCACTGACAGAACTCAAGCACCTCTGGGAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCCACCTTACTGCTaGCCGCATGCCACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLPPYC*PHATSV
Trigger: AACAGAAGTGGCATGCGGTCAGCAGTAAGGTGGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAACTGGTTCCCTGTTTaGTCCAGTTCAATGATCTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNWFPV*SSSMIW
Trigger: CCAGATCATTGAACTGGATCAAACAGGGAACCAGTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACAACATCCTGTTTCTaGCTAAGGAACTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTTSCF*LRNFNW
Trigger: CCAGTTGAAGTTCCTTAGTCAGAAACAGGATGTTGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGCTCTGCCAGTTCTaGTTGTGGTATCATACACAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVLCQF*LWYHTQ
Trigger: CTGTGTATGATACCACAATCAGAACTGGCAGAGCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGCTCTGCCAGTTCTaGTTGTGGTATCATACACAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVLCQF*LWYHTQ
Trigger: CTGTGTATGATACCACAATCAGAACTGGCAGAGCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATCCCATTTGTCTCTaGCTTCTCCTAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYPICL*LLLASC
Trigger: ACAACTTGCTAGGAGAAGTCAGAGACAAATGGGATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPAKHP*TGLKTV
Trigger: TACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPAKHP*TGLKTV
Trigger: TACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATCAGTTCTCTGCCTaGTCGTTTCAGGACCTGAAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINQFSA*SFQDLN
Trigger: GTTCAGGTCCTGAAACGATCAGGCAGAGAACTGATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAATCAGTTCTCTGCCTaGTCGTTTCAGGACCTGAAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNQFSA*SFQDLN
Trigger: GTTCAGGTCCTGAAACGATCAGGCAGAGAACTGATT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATCTCCTCCATAAATaGCTGATGCTCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHLLHK*LMLSDK
Trigger: CTTATCACTGAGCATCAGTCATTTATGGAGGAGATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTATATGTCTTGGTaGCCCTGTCCACGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISYMSW*PCPRQV
Trigger: AACCTGACGTGGACAGGGTCACCAAGACATATAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCATCGATAAACTCCTaGCGTGTTATCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPSINS*RVIFPS
Trigger: GGATGGGAAGATAACACGTCAGGAGTTTATCGATGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCATCGATAAACTCCTaGCGTGTTATCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPSINS*RVIFPS
Trigger: GGATGGGAAGATAACACGTCAGGAGTTTATCGATGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGCCACTTGTCTTGTaGCCTCATCTTCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEPLVL*PHLQSY
Trigger: ATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQLWLL*LALELE
Trigger: CTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTTTTGCATGGCTCTaGAGATGGGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPFAWL*RWGISP
Trigger: TGGAGATATTCCCCATCTTCAGAGCCATGCAAAAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCAACCCTGACTCTTaGTGGATGATACATCTCTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFNPDS*WMIHLC
Trigger: GCAGAGATGTATCATCCATCAAGAGTCAGGGTTGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTATCAGCCCTTCCTaGACAGCACGGAAAATGCTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSISPS*TARKML
Trigger: TAGCATTTTCCGTGCTGTTCAGGAAGGGCTGATAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGATGCCTCCTGTCTaGAGCTGCCTTATGAGAATA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMMPPV*SCLMRI
Trigger: TATTCTCATAAGGCAGCTTCAGACAGGAGGCATCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGCTTCTTGTTCTTTaGGGAAAAGCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWLLVL*GKAPFQ
Trigger: CTGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGGAGTTTGGCATTTTaGCTTCTCAGTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGSLAF*LLSRKV
Trigger: GACCTTTCTACTGAGAAGTCAAAATGCCAAACTCCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTACCAAACCAAGATTTaGGGCCAAAGTTACCGAAAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYQTKI*GQSYRK
Trigger: CTTTCGGTAACTTTGGCCTCAAATCTTGGTTTGGTA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTTCTCAACTTTTCTaGGCTGCCTGGCCATATCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSQLF*AAWPYL
Trigger: AAGATATGGCCAGGCAGCTCAGAAAAGTTGAGAACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTTCTCAACTTTTCTaGGCTGCCTGGCCATATCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSQLF*AAWPYL
Trigger: AAGATATGGCCAGGCAGCTCAGAAAAGTTGAGAACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTTCTGGCCATAAATaGAATCCCCCAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLISGHK*NPPSSH
Trigger: GTGGGAACTTGGGGGATTTCATTTATGGCCAGAAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCATGCATCACCCCTaGAGGCAATTCTGTTTTATT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPMHHP*RQFCFI
Trigger: AATAAAACAGAATTGCCTTCAGGGGTGATGCATGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCTTCCATCTCTACTaGAATCTTCCTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAFHLY*NLPALF
Trigger: GAAAAGGGCAGGAAGATTTCAGTAGAGATGGAAGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGATCCTTGCTCTTTTaGAACCATTCTCCCTTGACG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRSLLF*NHSPLT
Trigger: CGTCAAGGGAGAATGGTTTCAAAAGAGCAAGGATCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATGTGGGGTACATCTaGAATTTGGGGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNVGYI*NLGFFI
Trigger: GATGAAGAACCCCAAATTTCAGATGTACCCCACATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGAGTAAACACATTCTaGGTTGCTCTGCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRVNTF*VALQGS
Trigger: AGAGCCTTGCAGAGCAACTCAGAATGTGTTTACTCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAACTTCTTGTGGCTaGCTGATAACAATCCGATCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGTSCG*LITIRS
Trigger: GGATCGGATTGTTATCAGTCAGCCACAAGAAGTTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGCTTTCTCTCAGATaGCCCCACAGAAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWLSLR*PHRSQS
Trigger: GGATTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGACAATGGCTGTCCTTaGCAGCTTTACTGTTTATCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDNGCP*QLYCLS
Trigger: TGATAAACAGTAAAGCTGTCAAGGACAGCCATTGTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACCAGCCGCAACTGCTaGGAATCTCCAAACCGGTAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTSRNC*ESPNRY
Trigger: ATACCGGTTTGGAGATTCTCAGCAGTTGCGGCTGGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGAATGTTTTCTTTTaGACTCGGTCCCGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVNVFF*TRSRSS
Trigger: TGATGAGCGGGACCGAGTGCAAAAGAAAACATTCAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGAGATCTGGAAGTaGAAGATAATGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSEIWK*KIMVQI
Trigger: GATCTGGACCATTATCTTGCACTTCCAGATCTCTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCACTTCAAAGGCCTaGTCCAGGTTCTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNATSKA*SRFSLL
Trigger: TAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCAAGATCGTATGCTaGCTGATCCAGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIKIVC*LIQGMS
Trigger: ACTCATTCCCTGGATCAGGCAGCATACGATCTTGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTTGTTTGCAATCTaGAGCAGCAATTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGILFAI*SSNSSL
Trigger: GAGGCTAGAATTGCTGCTGCAGATTGCAAACAAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTGCAGCATCAGCCTaGAGTGTGTTCTTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCAASA*SVFLAS
Trigger: ACTAGCTAAGAACACACTGCAGGCTGATGCTGCACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGCTCCAGTTTCATCTaGATCTCTTCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRSSFI*ISSTQE
Trigger: CTCTTGGGTAGAAGAGATGCAGATGAAACTGGAGCG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCCVSN*SSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATGCCTCTACTGTTTaGTTAGCTGGGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYASTV*LAGWFS
Trigger: TGAGAACCACCCAGCTAAGCAAACAGTAGAGGCATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATGCCTCTACTGTTTaGTTAGCTGGGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYASTV*LAGWFS
Trigger: TGAGAACCACCCAGCTAAGCAAACAGTAGAGGCATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCACATGGTCTGGATTaGGTGGCTTTAGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAHGLD*VALAEQ
Trigger: TTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTGATTTCATCAGGTaGTGGAAGTGGGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSDFIR*WKWALQ
Trigger: TTGTAAAGCCCACTTCCAGCACCTGATGAAATCACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTGTGCTCCTGCTCTaGAATCCTCAATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICVLLL*NPQCDV
Trigger: GACATCACATTGAGGATTGCAGAGCAGGAGCACACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGATCTCAAATGCTaGAAATCCTCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSDLKC*KSSCVC
Trigger: GCACACACAGGAGGATTTGCAGCATTTGAGATCTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAGATCTCAAATGCTaGAAATCCTCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSDLKC*KSSCVC
Trigger: GCACACACAGGAGGATTTGCAGCATTTGAGATCTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRSDLK*CKSSCV
Trigger: CACACAGGAGGATTTGCAGCATTTGAGATCTGACCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGGTCTGCTGGCACTaGTTCCTCTTGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEVCWH*FLLTQL
Trigger: AAGCTGAGTCAAGAGGAAGCAGTGCCAGCAGACCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGCCGGAGCTGTTCTaGCACTTTCTTGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVPELF*HFLGLS
Trigger: ACTAAGGCCAAGAAAGTGGCAGAACAGCTCCGGCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTTGTGTATTTCTTaGCAGAGTAGACACCCAACC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLCIS*QSRHPT
Trigger: GGTTGGGTGTCTACTCTGGCAAGAAATACACAAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTTGTGTATTTCTTaGCAGAGTAGACACCCAACC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLCIS*QSRHPT
Trigger: GGTTGGGTGTCTACTCTGGCAAGAAATACACAAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCCTTCTCAATGTCTaGAGATGCACTAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGLLNV*RCTSVR
Trigger: TCTCACACTAGTGCATCTGCAGACATTGAGAAGGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCCTTCTCAATGTCTaGAGATGCACTAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGLLNV*RCTSVR
Trigger: TCTCACACTAGTGCATCTGCAGACATTGAGAAGGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTGTCTTGTTGTTTCTaGAGAGTCTTTTGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVSCCF*RVFCSV
Trigger: GACGGAACAAAAGACTCTGCAGAAACAACAAGACAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIELQDC*LPYAYY
Trigger: ATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSELQDC*LPYAYY
Trigger: ATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAGAGAAGCTTCCTTaGCGCTTTAGCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSEKLP*RFSKEF
Trigger: GAACTCCTTGCTAAAGCGGCAAGGAAGCTTCTCTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAGAGAAGCTTCCTTaGCGCTTTAGCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISEKLP*RFSKEF
Trigger: GAACTCCTTGCTAAAGCGGCAAGGAAGCTTCTCTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAGCQR*SGIADT
Trigger: AGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILRLSN*LLQQSR
Trigger: TCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAGCTTCTTTAGGTTaGTCTCCTTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGASLG*SPFLAA
Trigger: AGCAGCAAGAAAAGGAGAGCAACCTAAAGAAGCTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAGCTTCTTTAGGTTaGTCTCCTTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGASLG*SPFLAA
Trigger: AGCAGCAAGAAAAGGAGAGCAACCTAAAGAAGCTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTCCATGAACTGCTaGAGCTTGTTGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFSMNC*SLLESC
Trigger: GCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGTTTTCCATGAACTaGTGCAGCTTGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLFSMN*CSLLES
Trigger: GCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGAGCTCCTGGATCTaGTGGGAAAAATGTGCAATA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVSSWI*WEKCAI
Trigger: TATTGCACATTTTTCCCAGCAGATCCAGGAGCTCAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGAGCTCCTGGATCTaGTGGGAAAAATGTGCAATA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVSSWI*WEKCAI
Trigger: TATTGCACATTTTTCCCAGCAGATCCAGGAGCTCAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSVVTR*SRVSRF
Trigger: GAACCTAGATACTCTGGAGCACCTGGTTACTACACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSVVTR*SRVSRF
Trigger: GAACCTAGATACTCTGGAGCACCTGGTTACTACACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTATCCGTTTACACTaGCTACAGAGCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGIRLH*LQSFLQ
Trigger: CTGTAGGAAGCTCTGTAGGCAGTGTAAACGGATACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCATAAACTGGACCTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISINWT*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMLLPS*FKFLQH
Trigger: ATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMLLPS*FKFLQH
Trigger: ATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCAGCTGCTCATGCTaGTGCCTTCGTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFSCSC*CLRASN
Trigger: ATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCCTTGAGGTACTaGTCACCAATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSLRY*SPMSSE
Trigger: CTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAACATTTGCTGGAATTaGTGGGTGCTGGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINICWN*WVLARA
Trigger: AGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAACATTTGCTGGAATTaGTGGGTGCTGGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNICWN*WVLARA
Trigger: AGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTCATCAAACATTTaGTGGAATTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSSNI*WNCWVL
Trigger: CAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTCATCAAACATTTaGTGGAATTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSSNI*WNCWVL
Trigger: CAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWSGSY*SLFASL
Trigger: AAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWSGSY*SLFASL
Trigger: AAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTCGACAGTGGAACTaGCCAATCCCCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTRQWN*PIPSSL
Trigger: CAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATTTTTCGACACTCTaGTTCAGAGTCCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHFSTL*FRVLYV
Trigger: GACATAGAGGACTCTGAAGCAGAGTGTCGAAAAATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCAGTTTACCACACTaGTTATTAAGGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVSLPH*LLRASS
Trigger: GCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAACGTCAGCTCTAGCTaGTCCTGGCGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNVSSS*SWRTFP
Trigger: AGGGAAAGTTCGCCAGGAGCAGCTAGAGCTGACGTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCCTCCTGCAGTTGTaGAATTCTTTGTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLLQL*NSLCNL
Trigger: AAGGTTGCACAAAGAATTGCACAACTGCAGGAGGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCCTCCTGCAGTTGTaGAATTCTTTGTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLLQL*NSLCNL
Trigger: AAGGTTGCACAAAGAATTGCACAACTGCAGGAGGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTAACAGAGCCTCCTaGAGTTGTGCAATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCNRAS*SCAILC
Trigger: ACAAAGAATTGCACAACTGCAGGAGGCTCTGTTACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSRLSS*PVIFSL
Trigger: TAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRLSS*PVIFSL
Trigger: TAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGTTTTTGCCTGGCTaGTGCCTTGCTGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLFLPG*CLAEEI
Trigger: GATCTCCTCAGCAAGGCAGCAGCCAGGCAAAAACAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGATCAGTTTGTACTaGTCGTTGGCATCAGACACA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLISLY*SLASDT
Trigger: TGTGTCTGATGCCAACGAGCAGTACAAACTGATCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGATCAGTTTGTACTaGTCGTTGGCATCAGACACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLISLY*SLASDT
Trigger: TGTGTCTGATGCCAACGAGCAGTACAAACTGATCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCCTCATCTCTTCCTaGTGCTGTCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCLISS*CCLSCS
Trigger: TGAGCAGCTCAGACAGCAGCAGGAAGAGATGAGGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATGGATTCCCTTAGTTaGCTCATCTCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIMDSLS*LISSCC
Trigger: GCAGCAGGAAGAGATGAGGCAACTAAGGGAATCCAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCCTGGATTTCTTTTaGAGCCAGATCCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVLDFF*SQILVC
Trigger: GCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCCTGGATTTCTTTTaGAGCCAGATCCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVLDFF*SQILVC
Trigger: GCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRFSQR*LSSVSG
Trigger: ACCACTGACAGAACTCAAGCACCTCTGGGAGAATCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRFSQR*LSSVSG
Trigger: ACCACTGACAGAACTCAAGCACCTCTGGGAGAATCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCGATGTTTAAACTCTaGTCTGCTAGAGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAMFKL*SARVSQ
Trigger: CTGGCTTACTCTAGCAGAGCAGAGTTTAAACATCGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCGATGTTTAAACTCTaGTCTGCTAGAGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAMFKL*SARVSQ
Trigger: CTGGCTTACTCTAGCAGAGCAGAGTTTAAACATCGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATACACAGGCTGTTTaGCACCAAGAGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHTQAV*HQEFSE
Trigger: TTCAGAAAACTCTTGGTGGCAAACAGCCTGTGTATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCGCTCTACAGACTTaGCACAGACAGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVALQT*HRQYPI
Trigger: AATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCSSRL*LETESL
Trigger: TAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCSSRL*LETESL
Trigger: TAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAKCLF*FRKPLQ
Trigger: TTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAKCLF*FRKPLQ
Trigger: TTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATGATGGTGATCCAGTaGTTGATGGTCGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIMMVIQ*LMVVMQ
Trigger: CTGCATCACGACCATCAAGCACTGGATCACCATCAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGATGGTGATCCAGTaGTTGATGGTCGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMMVIQ*LMVVMQ
Trigger: CTGCATCACGACCATCAAGCACTGGATCACCATCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGATTCAAGGACTTTCTaGTACCACTGCGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLDSRTF*YHCGIS
Trigger: AGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGATTCAAGGACTTTCTaGTACCACTGCGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDSRTF*YHCGIS
Trigger: AGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCCCAGCAACTGCTCTaGAACCCTTTTGTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPQQLL*NPFVPS
Trigger: AGACGGAACAAAAGGGTTGCAGAGCAGTTGCTGGGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGATGATACATCTCTaGATCAGGTCCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWMIHL*IRSSKP
Trigger: TGGCTTGCTGGACCTGATGCAGAGATGTATCATCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCCCTCAATGTTTCTaGTTGCTCTTCCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLPQCF*LLFLST
Trigger: AGTAGAAAGGAAGAGCAAGCAGAAACATTGAGGGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTCTATCAATGGACTaGAAAACTGTTAACGGTGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPLSMD*KTVNGA
Trigger: AGCACCGTTAACAGTTTTGCAGTCCATTGATAGAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTACTTGGATCATAGCTaGCAGTTCAGGGCTAATCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYLDHS*QFRANQ
Trigger: CTGATTAGCCCTGAACTGGCAGCTATGATCCAAGTA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGATTCTGAGCAGGGATaGGTCACCGAAACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDSEQG*VTETWY
Trigger: ATACCAAGTTTCGGTGACGCATCCCTGCTCAGAATC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTCATTTGGACACTTTaGTCTCCACCCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLIWTL*SPPISL
Trigger: GAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAACTGCTGCTTCCCTaGTCATTTGGACACTTTGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIELLLP*SFGHFA
Trigger: AGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCAGAAAGAACTGCTaGTTCCCTGCTCATTTGGAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILRKNC*FPAHLD
Trigger: GTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATTCTGAGTTGCTCTaGAAGGCTCTGGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHSELL*KALGLH
Trigger: GTGTAAACCCAGAGCCTTGCAGAGCAACTCAGAATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAGATCTTGAAGTTTaGCTTGCAGTTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSDLEV*LAVPCA
Trigger: GGCACAAGGAACTGCAAGGCAAACTTCAAGATCTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCAGCATAAACTGCTaGTTCTGGGCATTCAACATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSINC*FWAFNM
Trigger: CATGTTGAATGCCCAGAAGCAGCAGTTTATGCTGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCCTCCCTGTGAGATaGTTCTGGAGTAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFLPVR*FWSKDF
Trigger: AAAATCCTTACTCCAGAAGCATCTCACAGGGAGGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSTLV*ICCCVS
Trigger: GGAAACACAGCAGCATATCCATACCAGTGTGGAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAGTATGGAAATTCTaGGACATCTTTCCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLVWKF*DIFPSY
Trigger: GTACGAGGGAAAGATGTCCCAGAATTTCCATACTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGATCAGTTCAGCTGTaGCTCTGGAGACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRSVQL*LWRQIC
Trigger: ACAAATTTGTCTCCAGAGCCACAGCTGAACTGATCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVCLAG*FSSDNT
Trigger: GGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVCLAG*FSSDNT
Trigger: GGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCATCCATTGCAACTaGGACTGGACAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFIHCN*DWTAAL
Trigger: TAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCATCCATTGCAACTaGGACTGGACAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFIHCN*DWTAAL
Trigger: TAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRLMES*RFLRND
Trigger: GTCATTTCTGAGAAACCTCCAAGACTCCATCAAACG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTCCTTTTCATCCATaGAGTCCTGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAPFHP*SPEADP
Trigger: AGGATCTGCTTCAGGACTCCATGGATGAAAAGGAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTCCTTTTCATCCATaGAGTCCTGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAPFHP*SPEADP
Trigger: AGGATCTGCTTCAGGACTCCATGGATGAAAAGGAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTCCCAACAAGACTaGCAACGGAACTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSISQQD*QRNSWT
Trigger: AGTCCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTTTCATAACCTGGTaGCACTCTCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFFITW*HSPGAK
Trigger: CTTAGCACCAGGAGAGTGCCACCAGGTTATGAAAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGGTTTTTCATAACCTaGTGGCACTCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRFFIT*WHSPGA
Trigger: AGCACCAGGAGAGTGCCACCAGGTTATGAAAAACCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGGTTTTTCATAACCTaGTGGCACTCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRFFIT*WHSPGA
Trigger: AGCACCAGGAGAGTGCCACCAGGTTATGAAAAACCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGATTTCATCAGGTGCTaGAAGTGGGCTTTACAAGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLDFIRC*KWALQA
Trigger: AGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGATTTCATCAGGTGCTaGAAGTGGGCTTTACAAGCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDFIRC*KWALQA
Trigger: AGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLGAG*RLNLFE
Trigger: CTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLGAG*RLNLFE
Trigger: CTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTCAGTCTTGGAGCTaGCTGGAGACTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCQSWS*LETEFV
Trigger: AACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPDGDC*RKTLHF
Trigger: GAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPDGDC*RKTLHF
Trigger: GAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAGCGCAGAGTTGTaGCACTTGAACCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSAEL*HLNLME
Trigger: CTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPSESL*PCLAKK
Trigger: CTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPSESL*PCLAKK
Trigger: CTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGAGCTGCTGGAGTTaGTTTGCAGAACCATCACAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWSCWS*FAEPSQ
Trigger: TTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGAGCTGCTGGAGTTaGTTTGCAGAACCATCACAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWSCWS*FAEPSQ
Trigger: TTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGTGGCAAATGAGGTaGAATGACTCTGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQWQMR*NDSECH
Trigger: GTGACATTCAGAGTCATTCCACCTCATTTGCCACTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACCCGTGTCCGTTCCTaGAGAACCTCATATTGCTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTRVRS*RTSYCS
Trigger: GGAGCAATATGAGGTTCTCCAGGAACGGACACGGGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCAAGTCTCCTTTGTaGGAAATGACATCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLKSPL*EMTSSE
Trigger: CTCTGAGGATGTCATTTCCCACAAAGGAGACTTGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTAGCTGATGGCTCTTaGCCTTCCTCAAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVADGS*PSSKLF
Trigger: AAACAATTTTGAGGAAGGCCAAGAGCCATCAGCTAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTGCTGCAGCTTGTTaGAGAGCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTAAAC*RAAQTS
Trigger: AGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTCCTGGATCTGCTaGGAAAAATGTGCAATATCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSWIC*EKCAIS
Trigger: AGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCAAAGTGAGCTCCTaGATCTGCTGGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAKVSS*ICWEKC
Trigger: ACATTTTTCCCAGCAGATCCAGGAGCTCACTTTGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTGCTCCTGGCAAGTaGATGCATCTTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTAPGK*MHLSLF
Trigger: AAAGAGAGAAAGATGCATCCACTTGCCAGGAGCAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTGCTCCTGGCAAGTaGATGCATCTTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTAPGK*MHLSLF
Trigger: AAAGAGAGAAAGATGCATCCACTTGCCAGGAGCAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCCAACTGCTCCTaGCAAGTGGATGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSNCS*QVDASF
Trigger: GAAAGATGCATCCACTTGCCAGGAGCAGTTGGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATCCAACTGCTCCTaGCAAGTGGATGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSNCS*QVDASF
Trigger: GAAAGATGCATCCACTTGCCAGGAGCAGTTGGATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAACCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEPVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAACCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEPVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTATGGAACCTGTTTTaGCTTGGGAATCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVWNLF*LGNQEL
Trigger: CAGCTCCTGATTCCCAAGCCAAAACAGGTTCCATAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGATCTTTGCAGGTGTaGTATCCGTTTACACTGCCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRSLQV*YPFTLP
Trigger: AGGCAGTGTAAACGGATACCACACCTGCAAAGATCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACAAAGTGGCATCCATaGCTTTCAGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTKWHP*LSGLLL
Trigger: AAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGTTGGAGACAAAGTaGCATCCATGGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWLETK*HPWLSG
Trigger: TCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCTTCTTGTGAGTTaGGATAGGTCTTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLLVS*DRSSVI
Trigger: GATTACTGAAGACCTATCCCAACTCACAAGAAGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTCTAGCTGCTTTTaGCGAGCCACAGTAACCTCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSSCF*RATVTS
Trigger: CGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGATCTTTGTGTACTTaGCTGGCAGATGGAGACATA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRSLCT*LADGDI
Trigger: TATGTCTCCATCTGCCAGCCAAGTACACAAAGATCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATAGCTTGGTCAATTTaGCTGGAACGGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIAWSI*LERELS
Trigger: GCTCAACTCCCGTTCCAGCCAAATTGACCAAGCTAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTGGAGCAGGTCTTaGTATTGGGTACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSWSRS*YWVLLT
Trigger: TGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTCTGATAAGTCCTaGAGCAGGTCTTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSDKS*SRSWYW
Trigger: CCAATACCAAGACCTGCTCCAGGACTTATCAGAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGTCGCTGTCCAATaGCCTTCACCTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSVAVQ*PSPFLI
Trigger: TATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATTTGCTGGAATTGCTaGGTGCTGGCAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNICWNC*VLARAA
Trigger: GGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATCAAACATTTGCTaGAATTGCTGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSNIC*NCWVLA
Trigger: TGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCATCAAACATTTGCTaGAATTGCTGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSNIC*NCWVLA
Trigger: TGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAAGATCTTCCCAGTaGCTTCTGAGTTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLRSSQ*LLSSTN
Trigger: GTTGGTTGAACTCAGAAGCCACTGGGAAGATCTTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTAAGATCTTCCCAGTaGCTTCTGAGTTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLRSSQ*LLSSTN
Trigger: GTTGGTTGAACTCAGAAGCCACTGGGAAGATCTTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTAGCTCAGACATCTTaGACTTGCACTCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVAQTS*TCTRLS
Trigger: GGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTAGCTCAGACATCTTaGACTTGCACTCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVAQTS*TCTRLS
Trigger: GGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTAGCTTGTTTTCCATaGTCAGGCAGCTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLACFP*SGSYCS
Trigger: TGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCAACTTCTGTTCTTaGATCTGTGCTTTCACCACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSNFCS*ICAFTT
Trigger: AGTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCTAGGAGTCGCTaGAGCAACTTCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSRSR*SNFCSW
Trigger: CCAAGAACAGAAGTTGCTCCAGCGACTCCTAGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAAGCATATCCACTGTaGCCTTTCGATCATCTAGGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEAYPL*PFDHLG
Trigger: TCCTAGATGATCGAAAGGCCACAGTGGATATGCTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAAGCATATCCACTGTaGCCTTTCGATCATCTAGGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEAYPL*PFDHLG
Trigger: TCCTAGATGATCGAAAGGCCACAGTGGATATGCTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGSAVS*NCLART
Trigger: GGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGSAVS*NCLART
Trigger: GGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTGCTGGTGTATTTTaGCAGTCTGAGTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISAGVF*QSECQQ
Trigger: CTGTTGGCACTCAGACTGCCAAAATACACCAGCAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGCTGGTGTATTTTaGCAGTCTGAGTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSAGVF*QSECQQ
Trigger: CTGTTGGCACTCAGACTGCCAAAATACACCAGCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTTGTGTTCAGCAATaGATTCCCTTAGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVCVQQ*IPLVAS
Trigger: TGAGGCAACTAAGGGAATCCATTGCTGAACACAAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRARAR*RTSSFI
Trigger: AATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTTGGCTCTCAGCTaGGAATGTAGTTCCATATGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLALS*ECSSIC
Trigger: ACATATGGAACTACATTCCCAGCTGAGAGCCAAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTTGGCTCTCAGCTaGGAATGTAGTTCCATATGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLALS*ECSSIC
Trigger: ACATATGGAACTACATTCCCAGCTGAGAGCCAAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCSKSG*EERRCL
Trigger: TAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCSKSG*EERRCL
Trigger: TAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTTCCAAGCTTCATaGAATTGCTTTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFFQAS*NCFARF
Trigger: GAAGCGGGCAAAGCAATTCCATGAAGCTTGGAAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCCTCAGCCAACTGTaGCTCCACCTTGTACAACCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVLSQL*LHLVQP
Trigger: TGGTTGTACAAGGTGGAGCCACAGTTGGCTGAGGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAAGCCGGCTTTGCTTaGAAACAGAGAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQAGFA*KQRVYT
Trigger: TGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAAGCCGGCTTTGCTTaGAAACAGAGAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQAGFA*KQRVYT
Trigger: TGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGGTCTCAGCCCACTaGATCCATGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVVSAH*IHARSS
Trigger: AGAACTTCTGGCATGGATCCAGTGGGCTGAGACCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTGCATCAGTTGTTaGCCGATAGGCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLICISC*PIGILV
Trigger: AACAAGGATGCCTATCGGCCAACAACTGATGCAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGGAGAAGAAGGCATaGATGTACAGCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILEKKA*MYSCGY
Trigger: GTAACCACAGCTGTACATCCATGCCTTCTTCTCCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGGAGAAGAAGGCATaGATGTACAGCTGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLEKKA*MYSCGY
Trigger: GTAACCACAGCTGTACATCCATGCCTTCTTCTCCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTGTGTCCTGTTCTTaGATCTACTATGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISVSCS*IYYATS
Trigger: GCTGGTGGCATAGTAGATCCAAGAACAGGACACAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGCTAGTTGTATGTaGGGCATCATGTCAGGGATA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSASCM*GIMSGI
Trigger: TATCCCTGACATGATGCCCCACATACAACTAGCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTGCTAGTTGTATGTaGGGCATCATGTCAGGGATA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSASCM*GIMSGI
Trigger: TATCCCTGACATGATGCCCCACATACAACTAGCAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACACTCTGTCCTTCTTaGCTTTGTTTGTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITLCPS*LCLWPS
Trigger: GGATGGCCACAAACAAAGCCAAGAAGGACAGAGTGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACACTCTGTCCTTCTTaGCTTTGTTTGTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTLCPS*LCLWPS
Trigger: GGATGGCCACAAACAAAGCCAAGAAGGACAGAGTGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAGACACAAGGCCTTaGGCTATTGCTTCATTTAGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLDTRP*AIASFS
Trigger: ACTAAATGAAGCAATAGCCCAAGGCCTTGTGTCTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATGCCAGCCTTTTCTaGAGCACACAGACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYASLF*STQTPS
Trigger: GCTGGGAGTCTGTGTGCTCCAGAAAAGGCTGGCATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCAATTGTAACTTCCTaGTCCAACTCTTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPIVTS*SNSSSE
Trigger: TTCTGAGGAAGAGTTGGACCAGGAAGTTACAATTGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAGTTCAGTCTTTCTaGTCTTGGGATCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGVQSF*SWDLRR
Trigger: TCTTCTGAGATCCCAAGACCAGAAAGACTGAACTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAGTTCAGTCTTTCTaGTCTTGGGATCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGVQSF*SWDLRR
Trigger: TCTTCTGAGATCCCAAGACCAGAAAGACTGAACTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTCATCTGATTCCTaGGAGTTCAGTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSSDS*EFSLSG
Trigger: ACCAGAAAGACTGAACTCCCAGGAATCAGATGAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTCTTGTGGTAATTTaGGCAGCCATGTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCLVVI*AAMSPL
Trigger: CAAAGGAGACATGGCTGCCCAAATTACCACAAGACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTCCACAAGACTTGTaGTCTGCTTTGCTATCCTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCPQDL*SALLSS
Trigger: TGAGGATAGCAAAGCAGACCACAAGTCTTGTGGACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCAGGAACTTCTTGTaGCTGACTGATAACAATCCG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSRNFL*LTDNNP
Trigger: CGGATTGTTATCAGTCAGCCACAAGAAGTTCCTGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCAGGAACTTCTTGTaGCTGACTGATAACAATCCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRNFL*LTDNNP
Trigger: CGGATTGTTATCAGTCAGCCACAAGAAGTTCCTGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGAGACAGATCCTGTaGGTGCTCAGATATAAAGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKRQIL*VLRYKE
Trigger: CTCTTTATATCTGAGCACCCACAGGATCTGTCTCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAAATCCTTAACATTTaGTTCTGCGCAGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQILNI*FCAEQG
Trigger: TCCCTGCTCTGCGCAGAACCAAATGTTAAGGATTTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGAGGTCAGGACAATaGCTGTCCTTGACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWRSGQ*LSLTAL
Trigger: TAAAGCTGTCAAGGACAGCCATTGTCCTGACCTCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGATCTGTTTTGGCTTaGGAATCAGGAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRSVLA*ESGAVM
Trigger: CATCACAGCTCCTGATTCCCAAGCCAAAACAGATCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134458.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTGCCCTTCTCTCTaGGTACATCATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCPSL*VHHHHL
Trigger: AAGATGATGATGATGTACCCAGAGAGAAGGGCAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCATAGAGATCATTaGTGTGCTTGCGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLHRDH*CACGPS
Trigger: TGAAGGTCCGCAAGCACATCAATGATCTCTATGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGGATTGCCATCTGTaGTGTCATCATTGCGGATAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWDCHL*CHHCGY
Trigger: ATATCCGCAATGATGACATCACAGATGGCAATCCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAAAGTTGGTGCATTTaGCTCCTGTGTAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKSWCI*LLCNQL
Trigger: CAGCTGGTTACACAGGAGTCAAATGCACCAACTTTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGGAAAAGATTTATCTaGCATCAAGATCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGKRFI*HQDRML
Trigger: CAGCATACGATCTTGATGTCAGATAAATCTTTTCCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAGCATTTCAACAATaGGTTTCCCCCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLAFQQ*VSPILL
Trigger: AAGAAGAATGGGGGAAACTCATTGTTGAAATGCTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGGAACCAATTCAAGTaGCGAGAAATGGCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRNQFK*REMAFP
Trigger: CGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTTCTGCTTTCAGGTaGGTAGTGGTTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGSAFR*VVVKVE
Trigger: CTCTACTTTAACCACTACTCACCTGAAAGCAGAACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAGGTTTTCTTGGCTaGGATATTGGGATTACTGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVGFLG*DIGITV
Trigger: GACAGTAATCCCAATATCTCAGCCAAGAAAACCTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTAGGTTTTCTTGGCTaGGATATTGGGATTACTGTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVGFLG*DIGITV
Trigger: GACAGTAATCCCAATATCTCAGCCAAGAAAACCTAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGGTATATTTTCGTTTaGTGGAGTCTTGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRYIFV*WSLGGF
Trigger: GAAACCTCCAAGACTCCATCAAACGAAAATATACCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACGGAACTCTTGGACTaGATAAGCTGCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITELLD*ISCSFS
Trigger: TGAAAAGGAGCAGCTTATTCAGTCCAAGAGTTCCGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLRGFS*TMVFDL
Trigger: GAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATTCGGTGGGGGAATaGGAAAGCAAACTGATGGAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYSVGE*ESKLME
Trigger: TTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATTCGGTGGGGGAATaGGAAAGCAAACTGATGGAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYSVGE*ESKLME
Trigger: TTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLTKLL*QHSTIL
Trigger: GAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTGGGAAAATTTTTaGCATTGGTCCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCWENF*HWSNFV
Trigger: GACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCGGAGAGCATCACTaGTATATTTTACATGCTGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAGEHH*YILHAE
Trigger: CTCAGCATGTAAAATATATCAGTGATGCTCTCCGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICTSVR*GSCSLC
Trigger: ACACAAGGAACAACTACCTCATCTCACACTAGTGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCTSVR*GSCSLC
Trigger: ACACAAGGAACAACTACCTCATCTCACACTAGTGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCCTTCTCTCCTTCTaGAAGCTTATGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFLLSF*KLMAML
Trigger: AAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCCTTCTCTCCTTCTaGAAGCTTATGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFLLSF*KLMAML
Trigger: AAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSESVVS*IGLQSR
Trigger: CCTGGACTGTAGGCCTATTCAAGAAACTACAGATTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIESVVS*IGLQSR
Trigger: CCTGGACTGTAGGCCTATTCAAGAAACTACAGATTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPRLLG*LLMRVM
Trigger: CATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPPPFC*RQSEGF
Trigger: AAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTTTCTGCTTCTTGTaGGTTGGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVFCFL*VGIGLQ
Trigger: CTGAAGACCTATCCCAACTCACAAGAAGCAGAAAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTTTCTGCTTCTTGTaGGTTGGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVFCFL*VGIGLQ
Trigger: CTGAAGACCTATCCCAACTCACAAGAAGCAGAAAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTCCCATCGGGAATTaGGGTCCTCTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFPIGN*GPLAFS
Trigger: AGAAAATGCAAGAGGACCTCAATTCCCGATGGGAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLFLKN*SECQQH
Trigger: GTGCTGCTGACATTCTGATCAATTCTTCAGAAATAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTCCTGGAACTCCTTaGGCCTCTGAGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFPGTP*ASESFL
Trigger: AAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTCCTGGAACTCCTTaGGCCTCTGAGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFPGTP*ASESFL
Trigger: AAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYVLNL*LEAIRV
Trigger: GACACGGATAGCCTCCAGTCACAAATTGAGGACGTA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCTCTAAGGCATCTTaGAATTTCCCACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGSKAS*NFPQCN
Trigger: GTTACATTGTGGGAAATTTCAAGATGCCTTAGAGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTATTTTGGCAGTCTaGGTGCCAACAGGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCILAV*VPTGSE
Trigger: CTCGGAACCTGTTGGCACTCAGACTGCCAAAATACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATCTTTGTGTCGAATaGTGTCAATGGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNLCVE*CQWRKP
Trigger: AGGCTTTCTCCATTGACATCATTCGACACAAAGATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQKNTI*SSLSWI
Trigger: AATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQKNTI*SSLSWI
Trigger: AATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCAGACCGTGCTTTaGTGTCCTCCCAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLQTVL*CPPRRT
Trigger: TGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCATGGTGCAGAGCTTaGTCACAGTGTTATCTAGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAWCRA*SQCYLA
Trigger: GGCTAGATAACACTGTGATCAAGCTCTGCACCATGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCAATTCACCCTGGTaGTTGAGTTTTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGINSPW*LSFSIS
Trigger: TGAGATGGAAAAACTCAATCACCAGGGTGAATTGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTGATCCAGTTCAATaGTCTGGTCTCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFDPVQ*SGLDDH
Trigger: ATGATCATCGAGACCAGATCATTGAACTGGATCAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAACTGGTTCCCTGTTTaGTCCAGTTCAATGATCTGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINWFPV*SSSMIW
Trigger: CCAGATCATTGAACTGGATCAAACAGGGAACCAGTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACAACATCCTGTTTCTaGCTAAGGAACTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTTSCF*LRNFNW
Trigger: CCAGTTGAAGTTCCTTAGTCAGAAACAGGATGTTGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACAACATCCTGTTTCTaGCTAAGGAACTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTTSCF*LRNFNW
Trigger: CCAGTTGAAGTTCCTTAGTCAGAAACAGGATGTTGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGAAATCTCCAGTTCTaGGTCCAGATGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGNLQF*VQMTLC
Trigger: GCAGAGAGTCATCTGGACTCAGAACTGGAGATTTCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKLSSF*VSPASK
Trigger: TTTGCTTGCTGGTGATACTCAGAAACTTGACAACTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATCCCATTTGTCTCTaGCTTCTCCTAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYPICL*LLLASC
Trigger: ACAACTTGCTAGGAGAAGTCAGAGACAAATGGGATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATCTCCTCCATAAATaGCTGATGCTCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHLLHK*LMLSDK
Trigger: CTTATCACTGAGCATCAGTCATTTATGGAGGAGATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCATCTCCTCCATAAATaGCTGATGCTCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHLLHK*LMLSDK
Trigger: CTTATCACTGAGCATCAGTCATTTATGGAGGAGATG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGCCACTTGTCTTGTaGCCTCATCTTCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEPLVL*PHLQSY
Trigger: ATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCCACTTGTCTTGTaGCCTCATCTTCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEPLVL*PHLQSY
Trigger: ATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFAHLH*ATCLVT
Trigger: GGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTCCCAAGAGCTGTTaGTATATTGGAAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPKSC*YIGRLM
Trigger: CATTAACCTTCCAATATATCAACAGCTCTTGGGACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATGATGCCTCCTGTCTaGAGCTGCCTTATGAGAATA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIMMPPV*SCLMRI
Trigger: TATTCTCATAAGGCAGCTTCAGACAGGAGGCATCAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGGAGTTTGGCATTTTaGCTTCTCAGTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGSLAF*LLSRKV
Trigger: GACCTTTCTACTGAGAAGTCAAAATGCCAAACTCCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGGAGTTTGGCATTTTaGCTTCTCAGTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGSLAF*LLSRKV
Trigger: GACCTTTCTACTGAGAAGTCAAAATGCCAAACTCCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGAGACTTTATGAGTaGTGTTCCAGTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLRLYE*CSSFTW
Trigger: CCAAGTGAAACTGGAACATCACTCATAAAGTCTCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTACCAAACCAAGATTTaGGGCCAAAGTTACCGAAAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYQTKI*GQSYRK
Trigger: CTTTCGGTAACTTTGGCCTCAAATCTTGGTTTGGTA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCACCGAAACTTGGTATaGAGATTCACCCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHRNLV*RFTLKT
Trigger: GGTTTTGAGGGTGAATCTTCATACCAAGTTTCGGTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAAATCACAAGATTCTaGGCAGGGATGCGTCACCGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQITRF*AGMRHR
Trigger: TCGGTGACGCATCCCTGCTCAGAATCTTGTGATTTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGCATCTTGATTTGTaGGGGAAGCATCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKHLDL*GKHLWM
Trigger: CATCCAAAGATGCTTCCCTCACAAATCAAGATGCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAGCATCTTGATTTGTaGGGGAAGCATCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKHLDL*GKHLWM
Trigger: CATCCAAAGATGCTTCCCTCACAAATCAAGATGCTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTACTAGCAGTTTCTTaGGATAATTTTTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVLAVS*DNFSPG
Trigger: ACCGGGAGAAAAATTATCTCAAGAAACTGCTAGTAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATGTGGGGTACATCTaGAATTTGGGGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNVGYI*NLGFFI
Trigger: GATGAAGAACCCCAAATTTCAGATGTACCCCACATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAGATATAAAGAGCTaGATATCCAAAGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSDIKS*ISKARA
Trigger: TGCCCTTGCTTTGGATATTCAGCTCTTTATATCTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCACCACATCTTTCTaGGCTGCAGTGTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCTTSF*AAVCST
Trigger: TGTGGAACACACTGCAGCTCAGAAAGATGTGGTGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCAGAGTCTTGACCTaGACTTCTTGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCRVLT*TSCWTC
Trigger: GCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACACCAGGTGGGCGTTaGACTCATGTTCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTPGGR*THVHLG
Trigger: ACCAAGATGAACATGAGTTCAACGCCCACCTGGTGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGAATGTTTTCTTTTaGACTCGGTCCCGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVNVFF*TRSRSS
Trigger: TGATGAGCGGGACCGAGTGCAAAAGAAAACATTCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCACTAGCTTCACCTaGCGCTGCTTTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFTSFT*RCFRKS
Trigger: GGACTTCCTAAAGCAGCGGCAGGTGAAGCTAGTGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAGAGATCTGGAAGTaGAAGATAATGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSEIWK*KIMVQI
Trigger: GATCTGGACCATTATCTTGCACTTCCAGATCTCTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGGCTTTGGTATTCTTaGCATCTGGAGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRLWYS*HLESTS
Trigger: GGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCAAGATCGTATGCTaGCTGATCCAGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIKIVC*LIQGMS
Trigger: ACTCATTCCCTGGATCAGGCAGCATACGATCTTGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTTGTTTGCAATCTaGAGCAGCAATTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHILFAI*SSNSSL
Trigger: GAGGCTAGAATTGCTGCTGCAGATTGCAAACAAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACATCTGACTCACACTaGACTGGCTGTCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTSDSH*TGCPDS
Trigger: GGAATCAGGACAGCCAGTGCAGTGTGAGTCAGATGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATACAAATCGAAGATTaGCTTCGTCTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIQIED*LRLQRM
Trigger: CATCCTCTGAAGACGAAGGCAATCTTCGATTTGTAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACACTGGTATGGATATaGTGCTGTGTTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITLVWI*CCVSNC
Trigger: GCAGTTGGAAACACAGCAGCATATCCATACCAGTGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATGCCTCTACTGTTTaGTTAGCTGGGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYASTV*LAGWFS
Trigger: TGAGAACCACCCAGCTAAGCAAACAGTAGAGGCATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTTCACAGATAAAGTaGTCTTCAGCACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPSQIK*SSAHGL
Trigger: CAGACCATGTGCTGAAGAGCACTTTATCTGTGAAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTTCACAGATAAAGTaGTCTTCAGCACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPSQIK*SSAHGL
Trigger: CAGACCATGTGCTGAAGAGCACTTTATCTGTGAAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGACTGTTCCACCCTaGTGGCCATTTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKTVPP*WPFQWP
Trigger: AGGCCATTGAAATGGCCAGCAGGGTGGAACAGTCTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTGATTTCATCAGGTaGTGGAAGTGGGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSDFIR*WKWALQ
Trigger: TTGTAAAGCCCACTTCCAGCACCTGATGAAATCACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAATCCTCCTGTGTGTaGTCCTGCTCTGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKSSCV*SCSAIL
Trigger: GAGGATTGCAGAGCAGGAGCACACACAGGAGGATTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAGATCTCAAATGCTaGAAATCCTCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSDLKC*KSSCVC
Trigger: GCACACACAGGAGGATTTGCAGCATTTGAGATCTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRSDLK*CKSSCV
Trigger: CACACAGGAGGATTTGCAGCATTTGAGATCTGACCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSDLK*CKSSCV
Trigger: CACACAGGAGGATTTGCAGCATTTGAGATCTGACCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTTGTCAACTCTTCTaGCAGAACCTGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGCQLF*QNLLLQ
Trigger: TTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAAAGCTTATGGCCATaGTTGGCTAAGAAGATCTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLESLWP*LAKKIC
Trigger: ACAGATCTTCTTAGCCAAGCATGGCCATAAGCTTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGTCTTGTTGTTTCTaGAGAGTCTTTTGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVSCCF*RVFCSV
Trigger: GACGGAACAAAAGACTCTGCAGAAACAACAAGACAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKSLWF*CRAGSS
Trigger: AGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQAPEN*SIPGRL
Trigger: TAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTGGCCTAGCAACATaGTCAGATGAGAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTGLAT*SDESPI
Trigger: GATTGGGCTCTCATCTGAGCATGTTGCTAGGCCAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATTCTTCCTGTAACTaGTTTGTTGTTGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNSSCN*FVVASC
Trigger: GCAGCTTGCAACAACAAAGCAGTTACAGGAAGAATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGCTCTCCTTTTCTTaGTGCTGGAGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLSFS*CWSWSC
Trigger: ACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAGCTTCTTTAGGTTaGTCTCCTTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGASLG*SPFLAA
Trigger: AGCAGCAAGAAAAGGAGAGCAACCTAAAGAAGCTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAGCTTCTTTAGGTTaGTCTCCTTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGASLG*SPFLAA
Trigger: AGCAGCAAGAAAAGGAGAGCAACCTAAAGAAGCTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGTTTTCCATGAACTaGTGCAGCTTGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLFSMN*CSLLES
Trigger: GCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGTTTTCCATGAACTaGTGCAGCTTGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILFSMN*CSLLES
Trigger: GCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGAGCTCCTGGATCTaGTGGGAAAAATGTGCAATA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVSSWI*WEKCAI
Trigger: TATTGCACATTTTTCCCAGCAGATCCAGGAGCTCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGAGCTCCTGGATCTaGTGGGAAAAATGTGCAATA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVSSWI*WEKCAI
Trigger: TATTGCACATTTTTCCCAGCAGATCCAGGAGCTCAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSVVTR*SRVSRF
Trigger: GAACCTAGATACTCTGGAGCACCTGGTTACTACACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCCTTGTTAGATTCTaGTTGGGCTTTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLVRF*LGFYCF
Trigger: GAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNADSSS*FWRATV
Trigger: TACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMLLPS*FKFLQH
Trigger: ATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCTGCTCATGCTGCTaGCTTCGTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSCSCC*LRASNS
Trigger: GGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTCATCAAACATTTaGTGGAATTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSSNI*WNCWVL
Trigger: CAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGCCGTTCCAATTTTaGAGAAATTGGGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEPFQF*RNWAVF
Trigger: AAAAACTGCCCAATTTCTGCAAAATTGGAACGGCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTACTGCTCACTCTTTaGTTCACTTCTAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLLTL*FTSKNS
Trigger: GGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTACTGCTCACTCTTTaGTTCACTTCTAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLLTL*FTSKNS
Trigger: GGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCATTTTTCGACACTCTaGTTCAGAGTCCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHFSTL*FRVLYV
Trigger: GACATAGAGGACTCTGAAGCAGAGTGTCGAAAAATG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCAGTTTACCACACTaGTTATTAAGGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVSLPH*LLRASS
Trigger: GCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCCTCCTGCAGTTGTaGAATTCTTTGTGCAACCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLLQL*NSLCNL
Trigger: AAGGTTGCACAAAGAATTGCACAACTGCAGGAGGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTAACAGAGCCTCCTaGAGTTGTGCAATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCNRAS*SCAILC
Trigger: ACAAAGAATTGCACAACTGCAGGAGGCTCTGTTACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATTCTGCCTCCTTCTaGTTGAAGCATATCCACTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYSASF*LKHIHC
Trigger: ACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATTCTGCCTCCTTCTaGTTGAAGCATATCCACTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYSASF*LKHIHC
Trigger: ACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSRLSS*PVIFSL
Trigger: TAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNLVAS*RACSKV
Trigger: AACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGATCAGTTTGTACTaGTCGTTGGCATCAGACACA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILISLY*SLASDT
Trigger: TGTGTCTGATGCCAACGAGCAGTACAAACTGATCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGATCAGTTTGTACTaGTCGTTGGCATCAGACACA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLISLY*SLASDT
Trigger: TGTGTCTGATGCCAACGAGCAGTACAAACTGATCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACTCGGTTTTCTCCTaGAGTACAGCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHSVFS*STAFCS
Trigger: GGAGCAGAAAGCTGTACTGCAGGAGAAAACCGAGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLSAP*DLPMSS
Trigger: GGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTGGTCAGGAGAGCTaGCATGTCATACCAGAACTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGGQES*HVIPEL
Trigger: AAGTTCTGGTATGACATGGCAGCTCTCCTGACCACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTACTGCACAGCAGCCTaGATGGCATCCTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYCTAA*MASSSF
Trigger: AAAACTCGAGGATGCCATGCAGGCTGCTGTGCAGTA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTGTAGGTTTAGATaGAGAAAGTTGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSCRFR*RKLVLH
Trigger: ATGGAGAACCAACTTTCTGCATCTAAACCTACAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTACTGCTGACCGCATaGCACTTCTGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLLTA*HFCSKS
Trigger: GCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCGATGTTTAAACTCTaGTCTGCTAGAGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAMFKL*SARVSQ
Trigger: CTGGCTTACTCTAGCAGAGCAGAGTTTAAACATCGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCATACACAGGCTGTTTaGCACCAAGAGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHTQAV*HQEFSE
Trigger: TTCAGAAAACTCTTGGTGGCAAACAGCCTGTGTATG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATACACAGGCTGTTTaGCACCAAGAGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHTQAV*HQEFSE
Trigger: TTCAGAAAACTCTTGGTGGCAAACAGCCTGTGTATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAGGACCTGAACTGTaGCGGTTCTCTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSGPEL*RFSFPV
Trigger: AACTGGGAAAGAGAACCGGCACAGTTCAGGTCCTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWCHLC*PQSVLC
Trigger: GCAGAGAACTGATTGAGGGCAGCAGAGATGACACCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCSSRL*LETESL
Trigger: TAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAKCLF*FRKPLQ
Trigger: TTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGATTCAAGGACTTTCTaGTACCACTGCGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDSRTF*YHCGIS
Trigger: AGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGATTCAAGGACTTTCTaGTACCACTGCGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDSRTF*YHCGIS
Trigger: AGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTTTTTGCACACTTaGACTGAGCCACTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIFLHT*TEPLVL
Trigger: CAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTTTTTGCACACTTaGACTGAGCCACTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIFLHT*TEPLVL
Trigger: CAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCTTGGATCTACTATaGCACCAGCAAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFLDLL*HQQIAG
Trigger: CCCAGCTATTTGCTGGTGGCATAGTAGATCCAAGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACCGTCTGACCATCTaGAACACTCTGTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHRLTI*NTLSFL
Trigger: CAAGAAGGACAGAGTGTTGCAGATGGTCAGACGGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAACTTTTCTGAGCTaGCTGGCCATATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSTFLS*LAISSP
Trigger: TGGTGAAGATATGGCCAGGCAGCTCAGAAAAGTTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTACTTGGATCATAGCTaGCAGTTCAGGGCTAATCAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYLDHS*QFRANQ
Trigger: CTGATTAGCCCTGAACTGGCAGCTATGATCCAAGTA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTACTGAAATCTTCCTaGCCTTTTCTGCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLKSS*PFLPFP
Trigger: GGGAAAAGGCAGAAAAGGGCAGGAAGATTTCAGTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTCAACAGGTTGCCTaGTGTTTCATAATGAGATCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTQQVA*CFIMRS
Trigger: GGATCTCATTATGAAACAGCAGGCAACCTGTTGAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTCAACAGGTTGCCTaGTGTTTCATAATGAGATCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTQQVA*CFIMRS
Trigger: GGATCTCATTATGAAACAGCAGGCAACCTGTTGAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTTGCAGTTCCTTGTaGCGATTTAACACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPCSSL*RFNTVA
Trigger: GGCCACAGTGTTAAATCGGCACAAGGAACTGCAAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACATCTTTCTGAGCTaGAGTGTGTTCCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHIFLS*SVFHKA
Trigger: GGCCTTGTGGAACACACTGCAGCTCAGAAAGATGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTTCAGCATAAACTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFSIN*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGTTTATGCTGAAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTGGAAACGCATCCTaGCCTTCTCTCTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCGNAS*PSLWVH
Trigger: ATGTACCCAGAGAGAAGGGCAGGATGCGTTTCCACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTACAGACTTCTCATCTaGAGATGGCACATCCACATC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYRLLI*RWHIHI
Trigger: GATGTGGATGTGCCATCTCCAGATGAGAAGTCTGTA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNESTRL*YSCHLE
Trigger: CTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTTTTCTCTCTCCTTaGCCAGTATTTCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLFLSP*PVFPFL
Trigger: AAGAAACGGAAATACTGGCCAAGGAGAGAGAAAAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSTLV*ICCCVS
Trigger: GGAAACACAGCAGCATATCCATACCAGTGTGGAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSTLV*ICCCVS
Trigger: GGAAACACAGCAGCATATCCATACCAGTGTGGAAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAGTATGGAAATTCTaGGACATCTTTCCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLVWKF*DIFPSY
Trigger: GTACGAGGGAAAGATGTCCCAGAATTTCCATACTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTCAGCTGTGGCTCTaGAGACAAATTTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVQLWL*RQICAG
Trigger: GCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGATCAGTTCAGCTGTaGCTCTGGAGACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRSVQL*LWRQIC
Trigger: ACAAATTTGTCTCCAGAGCCACAGCTGAACTGATCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCATTGCAACTGGGACTaGACAGCAGCACTATATGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHCNWD*TAALYA
Trigger: GGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRLMES*RFLRND
Trigger: GTCATTTCTGAGAAACCTCCAAGACTCCATCAAACG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGCTCTTCAGCACATaGTCTGGATTGCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVLFST*SGLRGF
Trigger: AAAGCCACGCAATCCAGACCATGTGCTGAAGAGCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCCTCCTTATTCGGTaGGGGAATGAGAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGLLIR*GNEKAN
Trigger: GTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGTTAATGTGTAGCTaGTGCCAAAGGGCCATCACC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVLMCS*CQRAIT
Trigger: GGTGATGGCCCTTTGGCACCAGCTACACATTAACAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTTTCATAACCTGGTaGCACTCTCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFFITW*HSPGAK
Trigger: CTTAGCACCAGGAGAGTGCCACCAGGTTATGAAAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTTCATAACCTGGTaGCACTCTCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFFITW*HSPGAK
Trigger: CTTAGCACCAGGAGAGTGCCACCAGGTTATGAAAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCAGGTGCTGGAAGTaGGCTTTACAAGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIRCWK*ALQAST
Trigger: GGTGGAAGCTTGTAAAGCCCACTTCCAGCACCTGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGATTTCATCAGGTGCTaGAAGTGGGCTTTACAAGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDFIRC*KWALQA
Trigger: AGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGATTTCATCAGGTGCTaGAAGTGGGCTTTACAAGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDFIRC*KWALQA
Trigger: AGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLGAG*RLNLFE
Trigger: CTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLGAG*RLNLFE
Trigger: CTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTCAGTCTTGGAGCTaGCTGGAGACTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICQSWS*LETEFV
Trigger: AACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTCAGTCTTGGAGCTaGCTGGAGACTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCQSWS*LETEFV
Trigger: AACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCATCTCTGTCAGTCTTaGAGCTGGCTGGAGACTGAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHLCQS*SWLETE
Trigger: TTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTACTATCCTCTGCCTaGCCAGGCTTCATCATTTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLSSA*PGFIIS
Trigger: GGAAATGATGAAGCCTGGCCAGGCAGAGGATAGTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGCTGCTCCAAAATaGCCTTCTCAATGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPAAPK*PSQCLQ
Trigger: CTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTTATGGCCATGCTTaGCTAAGAAGATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAYGHA*LRRSVK
Trigger: CTTCACAGATCTTCTTAGCCAAGCATGGCCATAAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTTATGGCCATGCTTaGCTAAGAAGATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAYGHA*LRRSVK
Trigger: CTTCACAGATCTTCTTAGCCAAGCATGGCCATAAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPSESL*PCLAKK
Trigger: CTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPSESL*PCLAKK
Trigger: CTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCGCTTTGGAGCTGCTaGAGTTGGTTTGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLWSC*SWFAEP
Trigger: TGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGTGGCAAATGAGGTaGAATGACTCTGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQWQMR*NDSECH
Trigger: GTGACATTCAGAGTCATTCCACCTCATTTGCCACTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCAAGTCTCCTTTGTaGGAAATGACATCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILKSPL*EMTSSE
Trigger: CTCTGAGGATGTCATTTCCCACAAAGGAGACTTGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAGCTGATGGCTCTTaGCCTTCCTCAAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVADGS*PSSKLF
Trigger: AAACAATTTTGAGGAAGGCCAAGAGCCATCAGCTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTCTACAGGTACTTaGTGTTCAGCCAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSTGT*CSANSS
Trigger: GGAAGAATTGGCTGAACACCAAGTACCTGTAGAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTCAACTTCCCTTATaGACTGCAGCAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVQLPL*TAAGSP
Trigger: TGGAGAGCCTGCTGCAGTCCATAAGGGAAGTTGAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTTTTCTTGCTGCTaGAGCTGGAGCTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFSCC*SWSCWK
Trigger: CTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTCCTGGATCTGCTaGGAAAAATGTGCAATATCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSWIC*EKCAIS
Trigger: AGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTCCTGGATCTGCTaGGAAAAATGTGCAATATCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSWIC*EKCAIS
Trigger: AGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTGCTCCTGGCAAGTaGATGCATCTTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITAPGK*MHLSLF
Trigger: AAAGAGAGAAAGATGCATCCACTTGCCAGGAGCAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGATCTTTGCAGGTGTaGTATCCGTTTACACTGCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSLQV*YPFTLP
Trigger: AGGCAGTGTAAACGGATACCACACCTGCAAAGATCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACAAAGTGGCATCCATaGCTTTCAGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTKWHP*LSGLLL
Trigger: AAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTTTAACAATAGCTTaGTCAATTTGGCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLTIA*SIWLER
Trigger: CCGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTGGAGCAGGTCTTaGTATTGGGTACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSWSRS*YWVLLT
Trigger: TGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCTGGAGCAGGTCTTaGTATTGGGTACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSWSRS*YWVLLT
Trigger: TGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTTCTGATAAGTCCTaGAGCAGGTCTTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSDKS*SRSWYW
Trigger: CCAATACCAAGACCTGCTCCAGGACTTATCAGAAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAGTCGCTGTCCAATaGCCTTCACCTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSVAVQ*PSPFLI
Trigger: TATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAGTCGCTGTCCAATaGCCTTCACCTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISVAVQ*PSPFLI
Trigger: TATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCAAACATTTGCTaGAATTGCTGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSNIC*NCWVLA
Trigger: TGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATCAAACATTTGCTaGAATTGCTGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSNIC*NCWVLA
Trigger: TGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTAAGATCTTCCCAGTaGCTTCTGAGTTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLRSSQ*LLSSTN
Trigger: GTTGGTTGAACTCAGAAGCCACTGGGAAGATCTTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGGCATCCATGTTCTaGTTGAGCCCAGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMASMF*LSPAFS
Trigger: TGAGAAGGCTGGGCTCAACCAGAACATGGATGCCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAAAGATTTCAAGCTaGTGTTTGGCTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSKISS*CLAPST
Trigger: AGTTGAAGGAGCCAAACACCAGCTTGAAATCTTTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSIRSI*SIFYES
Trigger: GGACTCGTAGAAGATGCTCCAGATGGATCGGATGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSNLRA*ILLRKS
Trigger: GCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTATACTCAGCAGATaGAGGCTTCTGATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFILSR*RLLIGY
Trigger: ATAGCCAATCAGAAGCCTCCATCTGCTGAGTATAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCAACTTCTGTTCTTaGATCTGTGCTTTCACCACT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSNFCS*ICAFTT
Trigger: AGTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAAGCATATCCACTGTaGCCTTTCGATCATCTAGGA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEAYPL*PFDHLG
Trigger: TCCTAGATGATCGAAAGGCCACAGTGGATATGCTTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSYVE*NLVASC
Trigger: GCAGCTGGCCACCAAGTTCCACTCTACATATGAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTTGTACTGCTCGTTaGCATCAGACACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVCTAR*HQTQVY
Trigger: ATAAACTTGTGTCTGATGCCAACGAGCAGTACAAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATGTTTCCCAAAACTaGTTCACTAAGACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYVSQN*FTKTCA
Trigger: AGCACAGGTCTTAGTGAACCAGTTTTGGGAAACATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTTGTGTTCAGCAATaGATTCCCTTAGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVCVQQ*IPLVAS
Trigger: TGAGGCAACTAAGGGAATCCATTGCTGAACACAAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPGSPT*VQFYHE
Trigger: TTCATGATAAAATTGAACCCATGTTGGAGACCCTGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAACTTCAATGACTTTTaGGTCTCCACTTATCGGTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNFNDF*VSTYRS
Trigger: AGACCGATAAGTGGAGACCCAAAAGTCATTGAAGTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTCAATTTCACTGTaGAAACCCTGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSISL*KPWACC
Trigger: GCAGCAGGCCCAGGGTTTCCACAGTGAAATTGAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTTGGCTCTCAGCTaGGAATGTAGTTCCATATGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLALS*ECSSIC
Trigger: ACATATGGAACTACATTCCCAGCTGAGAGCCAAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTAAATCTCTTCCTTaGCTCTCAGCTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCKSLP*LSAGNV
Trigger: TACATTCCCAGCTGAGAGCCAAGGAAGAGATTTACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTAAATCTCTTCCTTaGCTCTCAGCTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCKSLP*LSAGNV
Trigger: TACATTCCCAGCTGAGAGCCAAGGAAGAGATTTACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICSKSG*EERRCL
Trigger: TAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTGGAAAACCTTATaGGCATCCATGAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFWKTL*ASMRFM
Trigger: CATGAACCTCATGGATGCCCATAAGGTTTTCCAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTCCCAGTTCTTTTTaGAAAACCTTATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFPSSF*KTLWAS
Trigger: GGATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAAGCCGGCTTTGCTTaGAAACAGAGAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQAGFA*KQRVYT
Trigger: TGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAAGCCGGCTTTGCTTaGAAACAGAGAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQAGFA*KQRVYT
Trigger: TGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACTCCAACAGCATATaGACCGTGTCCCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHSNSI*TVSRNS
Trigger: AGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTATCTTCCCATCCTaGTCCTTGTCAATACGCCGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVIFPS*SLSIRR
Trigger: CCGGCGTATTGACAAGGACCAGGATGGGAAGATAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTGCATCAGTTGTTaGCCGATAGGCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIICISC*PIGILV
Trigger: AACAAGGATGCCTATCGGCCAACAACTGATGCAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTGCATCAGTTGTTaGCCGATAGGCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSICISC*PIGILV
Trigger: AACAAGGATGCCTATCGGCCAACAACTGATGCAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCAATCTGTTCCACTTaGAATCTTTTTGCACACTTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPICST*NLFAHL
Trigger: CAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGCTAGTTGTATGTaGGGCATCATGTCAGGGATA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSASCM*GIMSGI
Trigger: TATCCCTGACATGATGCCCCACATACAACTAGCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTTTGTGGGAGTTTaGCATTTTGACTTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHFVGV*HFDFSV
Trigger: TACTGAGAAGTCAAAATGCCAAACTCCCACAAAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAGACACAAGGCCTTaGGCTATTGCTTCATTTAGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLDTRP*AIASFS
Trigger: ACTAAATGAAGCAATAGCCCAAGGCCTTGTGTCTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTAGACACAAGGCCTTaGGCTATTGCTTCATTTAGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLDTRP*AIASFS
Trigger: ACTAAATGAAGCAATAGCCCAAGGCCTTGTGTCTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCTAAAATCCTTGTaGCTGTCTCCTTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPLKSL*LSPCQA
Trigger: TGCTTGACAAGGAGACAGCCACAAGGATTTTAGAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGATAAGTTCTGTCTaGTCAGCAGTGTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLISSV*SAVSTK
Trigger: TTTGGTAGACACTGCTGACCAGACAGAACTTATCAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCCCACTAAAGTCCTaGATCTCTTGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFPLKS*ISWISL
Trigger: AAGAGAAATCCAAGAGATCCAGGACTTTAGTGGGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTCATCTGATTCCTaGGAGTTCAGTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSSDS*EFSLSG
Trigger: ACCAGAAAGACTGAACTCCCAGGAATCAGATGAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTTCATCTGATTCCTaGGAGTTCAGTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSSDS*EFSLSG
Trigger: ACCAGAAAGACTGAACTCCCAGGAATCAGATGAAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTCCTTTGGAAATGTaGGGTACATCTGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSPLEM*GTSEIW
Trigger: CCAAATTTCAGATGTACCCCACATTTCCAAAGGAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCTCTTTCAATTTATaGGACCTTGTTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHASFNL*DLVGSI
Trigger: TATGGACCCAACAAGGTCCCATAAATTGAAAGAGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTCCACAAGACTTGTaGTCTGCTTTGCTATCCTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICPQDL*SALLSS
Trigger: TGAGGATAGCAAAGCAGACCACAAGTCTTGTGGACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATAAACTGCTGCTTCTaGGCATTCAACATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSINCCF*AFNMLG
Trigger: CCCCAACATGTTGAATGCCCAGAAGCAGCAGTTTAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGTGAGATGCTTCTaGAGTAAGGATTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPVRCF*SKDFLP
Trigger: GGGAAGAAAATCCTTACTCCAGAAGCATCTCACAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATAGCCAGAGGAGGATaGCAAAATGCTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIARGG*QNAHSD
Trigger: ATCACTGTGAGCATTTTGCCATCCTCCTCTGGCTAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCAATTTTAACTGCCTaGTGCACATCTGTTGCATGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPILTA*CTSVAW
Trigger: CCATGCAACAGATGTGCACCAGGCAGTTAAAATTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAAGGCATCATAAATTaGAGACACGTAAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEGIIN*RHVSDY
Trigger: GTAATCACTTACGTGTCTTCAATTTATGATGCCTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGGAAAAGATTTATCTaGCATCAAGATCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGKRFI*HQDRML
Trigger: CAGCATACGATCTTGATGTCAGATAAATCTTTTCCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGGAAAAGATTTATCTaGCATCAAGATCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGKRFI*HQDRML
Trigger: CAGCATACGATCTTGATGTCAGATAAATCTTTTCCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAGCATTTCAACAATaGGTTTCCCCCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLAFQQ*VSPILL
Trigger: AAGAAGAATGGGGGAAACTCATTGTTGAAATGCTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTAGGTTTTCTTGGCTaGGATATTGGGATTACTGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVGFLG*DIGITV
Trigger: GACAGTAATCCCAATATCTCAGCCAAGAAAACCTAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGGTATATTTTCGTTTaGTGGAGTCTTGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRYIFV*WSLGGF
Trigger: GAAACCTCCAAGACTCCATCAAACGAAAATATACCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLRGFS*TMVFDL
Trigger: GAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATGAGAAAGCAAACTaGTGGAACCATTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINEKAN*WNHCLV
Trigger: AACGAGGCAATGGTTCCATCAGTTTGCTTTCTCATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCTGGGAAAATTTTTaGCATTGGTCCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCWENF*HWSNFV
Trigger: GACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGACAGCAGTGGCAAATaGGGTGGAATGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDSSGK*GGMTLN
Trigger: ATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTLQCL*QQWQMR
Trigger: CCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWFTST*PSVAAK
Trigger: CTTAGCTGCCACTGATGGTCATGTAGATGTGAACCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGACAGCAATTCTTGGTaGCGAGCCTTCATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDSNSW*RAFISS
Trigger: TGAGCTAATGAAGGCTCGTCACCAAGAATTGCTGTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTCCTTTGTGGGAAATaGCATCCTCAGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLCGK*HPQRSF
Trigger: GAAGCTTCTCTGAGGATGTCATTTCCCACAAAGGAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCAACATGCTCAGATaGGAGCCCAATCGTATACAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSNMLR*EPNRIH
Trigger: GTGTATACGATTGGGCTCTCATCTGAGCATGTTGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGFCFP*TAAACW
Trigger: CCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTTCCTTTACTTTCTaGATTTTAGGGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGASFTF*ILGEFC
Trigger: ACAGAATTCCCCTAAAATTCAGAAAGTAAAGGAAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCTCAACCCACTTCTaGCTGATGCTTTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSTHF*LMLCRS
Trigger: AGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLFLKN*SECQQH
Trigger: GTGCTGCTGACATTCTGATCAATTCTTCAGAAATAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLFLKN*SECQQH
Trigger: GTGCTGCTGACATTCTGATCAATTCTTCAGAAATAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCTGCAATTTCACCTaGAGAGGATCCACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCCNFT*RGSTWS
Trigger: AGACCAAGTGGATCCTCTTCAGGTGAAATTGCAGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCTCTAAGGCATCTTaGAATTTCCCACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGSKAS*NFPQCN
Trigger: GTTACATTGTGGGAAATTTCAAGATGCCTTAGAGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCTCTAAGGCATCTTaGAATTTCCCACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGSKAS*NFPQCN
Trigger: GTTACATTGTGGGAAATTTCAAGATGCCTTAGAGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATCTGTCAACCAGCTaGGCAAAGGCTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYLSTS*AKALRH
Trigger: ATGCCTTAGAGCCTTTGCTCAGCTGGTTGACAGATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTTCTGTCTTTGCTaGAACTGGGGTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFCLC*NWGICS
Trigger: GGAGCAAATACCCCAGTTTCAGCAAAGACAGAAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCCAACAGTGTCACTaGTCAGTTTGTACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVQQCH*SVCTAR
Trigger: ACGAGCAGTACAAACTGATCAGTGACACTGTTGGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCTCGTACTGTTGTaGTCTCTGAATAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLVLL*SLNSSI
Trigger: GATGCTGCTATTCAGAGATCACAACAGTACGAGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAATCTTTGTGTCGAATaGTGTCAATGGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNLCVE*CQWRKP
Trigger: AGGCTTTCTCCATTGACATCATTCGACACAAAGATT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAAGAGCTCATCCATTaGATCTTTGTGTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEELIH*IFVSND
Trigger: ATCATTCGACACAAAGATTCAATGGATGAGCTCTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAAGAGCTCATCCATTaGATCTTTGTGTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEELIH*IFVSND
Trigger: ATCATTCGACACAAAGATTCAATGGATGAGCTCTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTCCCCACGGTGACTaGAGAGCTCATCCATTGAAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFPHGD*RAHPLN
Trigger: ATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCATCTCATTTAACTaGTCTTTGACAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFISFN*SLTVLR
Trigger: CCTCAACACTGTCAAAGATCAGTTAAATGAGATGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATTCACCCTGGTGATTaGGTTTTTCCATCTCAATTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIHPGD*VFPSQF
Trigger: AAATTGAGATGGAAAAACTCAATCACCAGGGTGAAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCAATTCACCCTGGTaGTTGAGTTTTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLINSPW*LSFSIS
Trigger: TGAGATGGAAAAACTCAATCACCAGGGTGAATTGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGATCTGGTCTCGATaGTCATTTACTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMIWSR*SFTSLA
Trigger: TGCTAATGAAGTAAATGATCATCGAGACCAGATCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTGATCCAGTTCAATaGTCTGGTCTCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFDPVQ*SGLDDH
Trigger: ATGATCATCGAGACCAGATCATTGAACTGGATCAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTGATCCAGTTCAATaGTCTGGTCTCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFDPVQ*SGLDDH
Trigger: ATGATCATCGAGACCAGATCATTGAACTGGATCAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACAACATCCTGTTTCTaGCTAAGGAACTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTTSCF*LRNFNW
Trigger: CCAGTTGAAGTTCCTTAGTCAGAAACAGGATGTTGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGCTCTGCCAGTTCTaGTTGTGGTATCATACACAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVLCQF*LWYHTQ
Trigger: CTGTGTATGATACCACAATCAGAACTGGCAGAGCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKLSSF*VSPASK
Trigger: TTTGCTTGCTGGTGATACTCAGAAACTTGACAACTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKLSSF*VSPASK
Trigger: TTTGCTTGCTGGTGATACTCAGAAACTTGACAACTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATCCCATTTGTCTCTaGCTTCTCCTAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYPICL*LLLASC
Trigger: ACAACTTGCTAGGAGAAGTCAGAGACAAATGGGATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATCCCATTTGTCTCTaGCTTCTCCTAGCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYPICL*LLLASC
Trigger: ACAACTTGCTAGGAGAAGTCAGAGACAAATGGGATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPAKHP*TGLKTV
Trigger: TACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCTACTTTCTTCATaGATTCCTTATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLLSS*IPYGCQ
Trigger: TTGACACCCATAAGGAATTCATGAAGAAAGTAGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATCTCCTCCATAAATaGCTGATGCTCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHLLHK*LMLSDK
Trigger: CTTATCACTGAGCATCAGTCATTTATGGAGGAGATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATCTCCTCCATAAATaGCTGATGCTCAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHLLHK*LMLSDK
Trigger: CTTATCACTGAGCATCAGTCATTTATGGAGGAGATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCATCGATAAACTCCTaGCGTGTTATCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPSINS*RVIFPS
Trigger: GGATGGGAAGATAACACGTCAGGAGTTTATCGATGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGCCACTTGTCTTGTaGCCTCATCTTCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEPLVL*PHLQSY
Trigger: ATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTCCCAAGAGCTGTTaGTATATTGGAAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSPKSC*YIGRLM
Trigger: CATTAACCTTCCAATATATCAACAGCTCTTGGGACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAAGACTTGATGCAATaGAGCCTTGATGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEDLMQ*SLDEKL
Trigger: AAGCTTTTCATCAAGGCTTCATTGCATCAAGTCTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAAGACTTGATGCAATaGAGCCTTGATGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEDLMQ*SLDEKL
Trigger: AAGCTTTTCATCAAGGCTTCATTGCATCAAGTCTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTATCAGCCCTTCCTaGACAGCACGGAAAATGCTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSISPS*TARKML
Trigger: TAGCATTTTCCGTGCTGTTCAGGAAGGGCTGATAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGGAAGAATTACTTaGCAGTCATCTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSGRIT*QSSLDV
Trigger: AACATCCAGAGATGACTGTCAAGTAATTCTTCCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTTGGAATGTCTTTaGTGGTCTTCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHLECL*WSSLVL
Trigger: AAGAACAAGTGAAGACCATCAAAGACATTCCAAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGATTTTGAGACTTTATaGGTGATGTTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDFETL*VMFQFH
Trigger: GTGAAACTGGAACATCACTCATAAAGTCTCAAAATC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCACTTAACATCTGGTaGGATGCAATAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPLNIW*DAIILA
Trigger: GGCCAGGATTATTGCATCTCACCAGATGTTAAGTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTACTAGCAGTTTCTTaGGATAATTTTTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVLAVS*DNFSPG
Trigger: ACCGGGAGAAAAATTATCTCAAGAAACTGCTAGTAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGAATCTAGATAACTaGTACCTTCTGTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKNLDN*YLLSLE
Trigger: CTCTAGAGACAGAAGGTATCAGTTATCTAGATTCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTACTTTAGATTTCTaGTGTCCACAAGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVTLDF*CPQDLW
Trigger: CCACAAGTCTTGTGGACATCAGAAATCTAAAGTAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTACTTTAGATTTCTaGTGTCCACAAGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVTLDF*CPQDLW
Trigger: CCACAAGTCTTGTGGACATCAGAAATCTAAAGTAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTAAGCTCCAAAGGTTaGATCTGTTTGGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSSKG*ICLVLI
Trigger: AATGAGAACCAAACAGATTCAACCTTTGGAGCTTAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTACGAACACTGTACTaGGCTTGTCCTCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLRTLY*ACPQPQ
Trigger: CTGAGGTTGAGGACAAGCTCAGTACAGTGTTCGTAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAGAGATCTGGAAGTaGAAGATAATGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISEIWK*KIMVQI
Trigger: GATCTGGACCATTATCTTGCACTTCCAGATCTCTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTTGTTTGCAATCTaGAGCAGCAATTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIILFAI*SSNSSL
Trigger: GAGGCTAGAATTGCTGCTGCAGATTGCAAACAAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATTCTGTATCTTGTTTaGAATCTGCAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGILYLV*NLQQQF
Trigger: GAATTGCTGCTGCAGATTGCAAACAAGATACAGAAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTGCAGCATCAGCCTaGAGTGTGTTCTTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCAASA*SVFLAS
Trigger: ACTAGCTAAGAACACACTGCAGGCTGATGCTGCACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATACAAATCGAAGATTaGCTTCGTCTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIQIED*LRLQRM
Trigger: CATCCTCTGAAGACGAAGGCAATCTTCGATTTGTAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCGCTCCAGTTTCATCTaGATCTCTTCTACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRSSFI*ISSTQE
Trigger: CTCTTGGGTAGAAGAGATGCAGATGAAACTGGAGCG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAACTGGAAGTAAGCTaGATTCTCTTTTACATGTTG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGELEVS*ILFYML
Trigger: CAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCACATGGTCTGGATTaGGTGGCTTTAGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAHGLD*VALAEQ
Trigger: TTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTGATTTCATCAGGTaGTGGAAGTGGGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSDFIR*WKWALQ
Trigger: TTGTAAAGCCCACTTCCAGCACCTGATGAAATCACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTGTGCTCCTGCTCTaGAATCCTCAATGTGATGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCVLLL*NPQCDV
Trigger: GACATCACATTGAGGATTGCAGAGCAGGAGCACACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAACCTGATGGAGACTaGTGGAGAAAGACGTTGCAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEPDGD*WRKTLH
Trigger: ATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCCTTCTCAATGTCTaGAGATGCACTAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGLLNV*RCTSVR
Trigger: TCTCACACTAGTGCATCTGCAGACATTGAGAAGGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAAAGCTTATGGCCATaGTTGGCTAAGAAGATCTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSESLWP*LAKKIC
Trigger: ACAGATCTTCTTAGCCAAGCATGGCCATAAGCTTTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGTCTTGTTGTTTCTaGAGAGTCTTTTGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVSCCF*RVFCSV
Trigger: GACGGAACAAAAGACTCTGCAGAAACAACAAGACAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCATATTGCTCCTTTaGCTGATGAAGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLILLL*LMKFFS
Trigger: CGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTCATATTGCTCCTTTaGCTGATGAAGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLILLL*LMKFFS
Trigger: CGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCTGCCTCCCTTATaGATACTATCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLPPL*ILSSSF
Trigger: GAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAGAGAAGCTTCCTTaGCGCTTTAGCAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSEKLP*RFSKEF
Trigger: GAACTCCTTGCTAAAGCGGCAAGGAAGCTTCTCTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATTCTTCCTGTAACTaGTTTGTTGTTGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNSSCN*FVVASC
Trigger: GCAGCTTGCAACAACAAAGCAGTTACAGGAAGAATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLRLSN*LLQQSR
Trigger: TCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTATCCGTTTACACTaGCTACAGAGCTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGIRLH*LQSFLQ
Trigger: CTGTAGGAAGCTCTGTAGGCAGTGTAAACGGATACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCCTTGTTAGATTCTaGTTGGGCTTTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLVRF*LGFYCF
Trigger: GAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAATTGAGGTCCTCTTaGATTTTCTTCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGELRSS*IFFQFS
Trigger: AGAAAACTGGAAGAAAATGCAAGAGGACCTCAATTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCATAAACTGGACCTaGTGCTTCTGGGCATTCAAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSINWT*CFWAFN
Trigger: GTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCAGCTGCTCATGCTaGTGCCTTCGTGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFSCSC*CLRASN
Trigger: ATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCCTTGAGGTACTaGTCACCAATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSLRY*SPMSSE
Trigger: CTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCCGTTCCAATTTTaGAGAAATTGGGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEPFQF*RNWAVF
Trigger: AAAAACTGCCCAATTTCTGCAAAATTGGAACGGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTACTGCTCACTCTTTaGTTCACTTCTAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLLTL*FTSKNS
Trigger: GGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTACTGCTCACTCTTTaGTTCACTTCTAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLLTL*FTSKNS
Trigger: GGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWSGSY*SLFASL
Trigger: AAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATTTTTCGACACTCTaGTTCAGAGTCCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHFSTL*FRVLYV
Trigger: GACATAGAGGACTCTGAAGCAGAGTGTCGAAAAATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCAGTTTACCACACTaGTTATTAAGGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVSLPH*LLRASS
Trigger: GCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCAGTTTACCACACTaGTTATTAAGGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVSLPH*LLRASS
Trigger: GCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTAAAATCTGCTAGTTaGTGGTTGATGACATCCACT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLKSAS*WLMTST
Trigger: AGTGGATGTCATCAACCAGCAACTAGCAGATTTTAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTAACAGAGCCTCCTaGAGTTGTGCAATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCNRAS*SCAILC
Trigger: ACAAAGAATTGCACAACTGCAGGAGGCTCTGTTACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTAACAGAGCCTCCTaGAGTTGTGCAATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICNRAS*SCAILC
Trigger: ACAAAGAATTGCACAACTGCAGGAGGCTCTGTTACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATTCTGCCTCCTTCTaGTTGAAGCATATCCACTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYSASF*LKHIHC
Trigger: ACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATTCTGCCTCCTTCTaGTTGAAGCATATCCACTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYSASF*LKHIHC
Trigger: ACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCCTGGATTTCTTTTaGAGCCAGATCCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVLDFF*SQILVC
Trigger: GCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRFSQR*LSSVSG
Trigger: ACCACTGACAGAACTCAAGCACCTCTGGGAGAATCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCTGTAGGTTTAGATaGAGAAAGTTGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCRFR*RKLVLH
Trigger: ATGGAGAACCAACTTTCTGCATCTAAACCTACAGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTAGCAAAAACCTTGTaGTCTTCTATCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLAKTL*SSIWER
Trigger: TCTTTCCCAGATAGAAGAGCACAAGGTTTTTGCTAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATACACAGGCTGTTTaGCACCAAGAGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHTQAV*HQEFSE
Trigger: TTCAGAAAACTCTTGGTGGCAAACAGCCTGTGTATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCGCTCTACAGACTTaGCACAGACAGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVALQT*HRQYPI
Trigger: AATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIFNLI*ISCWPI
Trigger: TATCGGCCAACAACTGATGCAGATAAGATTGAAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTTTTTGCACACTTaGACTGAGCCACTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIFLHT*TEPLVL
Trigger: CAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTTTTTGCACACTTaGACTGAGCCACTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIFLHT*TEPLVL
Trigger: CAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATTCCCCCTGCCAACTaGTTGACAGGCAACAATTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIPPAN*LTGNNF
Trigger: GAAATTGTTGCCTGTCAAGCAGTTGGCAGGGGGAAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGACCTTTCACCTTTTaGTTCAGTACAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRPFTF*FSTVFL
Trigger: CAGGAAAACTGTACTGAAGCAAAAGGTGAAAGGTCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGACCTTTCACCTTTTaGTTCAGTACAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRPFTF*FSTVFL
Trigger: CAGGAAAACTGTACTGAAGCAAAAGGTGAAAGGTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTCCCTCAATGTTTCTaGTTGCTCTTCCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLPQCF*LLFLST
Trigger: AGTAGAAAGGAAGAGCAAGCAGAAACATTGAGGGAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCCCTCAATGTTTCTaGTTGCTCTTCCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILPQCF*LLFLST
Trigger: AGTAGAAAGGAAGAGCAAGCAGAAACATTGAGGGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTCTATCAATGGACTaGAAAACTGTTAACGGTGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPLSMD*KTVNGA
Trigger: AGCACCGTTAACAGTTTTGCAGTCCATTGATAGAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTCAACAGGTTGCCTaGTGTTTCATAATGAGATCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITQQVA*CFIMRS
Trigger: GGATCTCATTATGAAACAGCAGGCAACCTGTTGAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAAGGATCTCTTTGTaGTTTTCCTTAGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPRISL*FSLGIF
Trigger: GAAGATACCTAAGGAAAAGCACAAAGAGATCCTTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAAGGATCTCTTTGTaGTTTTCCTTAGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPRISL*FSLGIF
Trigger: GAAGATACCTAAGGAAAAGCACAAAGAGATCCTTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTCACAGTTCCTTTCTaGTGGGTTATCAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLTVPF*WVIKQV
Trigger: CACCTGCTTGATAACCCAGCAGAAAGGAACTGTGAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCCCAATTTTAACTaGCTGGTGCACATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLPNFN*LVHICC
Trigger: GCAACAGATGTGCACCAGGCAGTTAAAATTGGGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTTTTCTCTCTCCTTaGCCAGTATTTCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLFLSP*PVFPFL
Trigger: AAGAAACGGAAATACTGGCCAAGGAGAGAGAAAAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTAGTATGGAAATTCTaGGACATCTTTCCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLVWKF*DIFPSY
Trigger: GTACGAGGGAAAGATGTCCCAGAATTTCCATACTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTAGTATGGAAATTCTaGGACATCTTTCCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILVWKF*DIFPSY
Trigger: GTACGAGGGAAAGATGTCCCAGAATTTCCATACTAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGATCAGTTCAGCTGTaGCTCTGGAGACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSVQL*LWRQIC
Trigger: ACAAATTTGTCTCCAGAGCCACAGCTGAACTGATCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCATCCATTGCAACTaGGACTGGACAGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFIHCN*DWTAAL
Trigger: TAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRLMES*RFLRND
Trigger: GTCATTTCTGAGAAACCTCCAAGACTCCATCAAACG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRLMES*RFLRND
Trigger: GTCATTTCTGAGAAACCTCCAAGACTCCATCAAACG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTCCCAACAAGACTaGCAACGGAACTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNISQQD*QRNSWT
Trigger: AGTCCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPDGDC*RKTLHF
Trigger: GAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTCTCAGAACTTCCTaGATACTTTCTACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLRTS*ILSTSD
Trigger: ATCTGAGGTAGAAAGTATCCAGGAAGTTCTGAGAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTCTCAGAACTTCCTaGATACTTTCTACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLRTS*ILSTSD
Trigger: ATCTGAGGTAGAAAGTATCCAGGAAGTTCTGAGAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGAGCTGCTGGAGTTaGTTTGCAGAACCATCACAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWSCWS*FAEPSQ
Trigger: TTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTTCAAATTCCTTGTaGTCTTGCAGGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSNSL*SCRNFC
Trigger: GCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTTCTACAGGTACTTaGTGTTCAGCCAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSTGT*CSANSS
Trigger: GGAAGAATTGGCTGAACACCAAGTACCTGTAGAAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTTCTACAGGTACTTaGTGTTCAGCCAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSTGT*CSANSS
Trigger: GGAAGAATTGGCTGAACACCAAGTACCTGTAGAAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTGCTGCAGCTTGTTaGAGAGCTGCTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTAAAC*RAAQTS
Trigger: AGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTCCTGGATCTGCTaGGAAAAATGTGCAATATCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSWIC*EKCAIS
Trigger: AGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCTCCTGGATCTGCTaGGAAAAATGTGCAATATCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSWIC*EKCAIS
Trigger: AGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCCAACTGCTCCTaGCAAGTGGATGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSNCS*QVDASF
Trigger: GAAAGATGCATCCACTTGCCAGGAGCAGTTGGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACAAAGTGGCATCCATaGCTTTCAGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTKWHP*LSGLLL
Trigger: AAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGTTGGAGACAAAGTaGCATCCATGGCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWLETK*HPWLSG
Trigger: TCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGTTAGATTCTGCTTaGGCTTTTACTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLDSA*AFTVSV
Trigger: GACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGCTTCTTGTGAGTTaGGATAGGTCTTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLLVS*DRSSVI
Trigger: GATTACTGAAGACCTATCCCAACTCACAAGAAGCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTTCTTGTGAGTTaGGATAGGTCTTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLLVS*DRSSVI
Trigger: GATTACTGAAGACCTATCCCAACTCACAAGAAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGATCTTTGTGTACTTaGCTGGCAGATGGAGACATA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSLCT*LADGDI
Trigger: TATGTCTCCATCTGCCAGCCAAGTACACAAAGATCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATAGCTTGGTCAATTTaGCTGGAACGGGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIAWSI*LERELS
Trigger: GCTCAACTCCCGTTCCAGCCAAATTGACCAAGCTAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTTTAACAATAGCTTaGTCAATTTGGCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLTIA*SIWLER
Trigger: CCGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTTTAACAATAGCTTaGTCAATTTGGCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLTIA*SIWLER
Trigger: CCGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTGGAGCAGGTCTTaGTATTGGGTACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSWSRS*YWVLLT
Trigger: TGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTCTGATAAGTCCTaGAGCAGGTCTTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFSDKS*SRSWYW
Trigger: CCAATACCAAGACCTGCTCCAGGACTTATCAGAAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTAGCTCAGACATCTTaGACTTGCACTCGTCTATCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVAQTS*TCTRLS
Trigger: GGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAAAGATTTCAAGCTaGTGTTTGGCTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSKISS*CLAPST
Trigger: AGTTGAAGGAGCCAAACACCAGCTTGAAATCTTTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAAAGATTTCAAGCTaGTGTTTGGCTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSKISS*CLAPST
Trigger: AGTTGAAGGAGCCAAACACCAGCTTGAAATCTTTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTAGCTTGTTTTCCATaGTCAGGCAGCTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLACFP*SGSYCS
Trigger: TGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSNLRA*ILLRKS
Trigger: GCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTATACTCAGCAGATaGAGGCTTCTGATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFILSR*RLLIGY
Trigger: ATAGCCAATCAGAAGCCTCCATCTGCTGAGTATAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCAACTTCTGTTCTTaGATCTGTGCTTTCACCACT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISNFCS*ICAFTT
Trigger: AGTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCAACTTCTGTTCTTaGATCTGTGCTTTCACCACT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSNFCS*ICAFTT
Trigger: AGTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCTAGGAGTCGCTaGAGCAACTTCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSRSR*SNFCSW
Trigger: CCAAGAACAGAAGTTGCTCCAGCGACTCCTAGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGSAVS*NCLART
Trigger: GGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTGCTGGTGTATTTTaGCAGTCTGAGTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSAGVF*QSECQQ
Trigger: CTGTTGGCACTCAGACTGCCAAAATACACCAGCAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTTGTACTGCTCGTTaGCATCAGACACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVCTAR*HQTQVY
Trigger: ATAAACTTGTGTCTGATGCCAACGAGCAGTACAAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTTGTACTGCTCGTTaGCATCAGACACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVCTAR*HQTQVY
Trigger: ATAAACTTGTGTCTGATGCCAACGAGCAGTACAAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTTGTGTTCAGCAATaGATTCCCTTAGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVCVQQ*IPLVAS
Trigger: TGAGGCAACTAAGGGAATCCATTGCTGAACACAAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPGSPT*VQFYHE
Trigger: TTCATGATAAAATTGAACCCATGTTGGAGACCCTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPGSPT*VQFYHE
Trigger: TTCATGATAAAATTGAACCCATGTTGGAGACCCTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTAAATCTCTTCCTTaGCTCTCAGCTGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICKSLP*LSAGNV
Trigger: TACATTCCCAGCTGAGAGCCAAGGAAGAGATTTACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTTTCCAAGCTTCATaGAATTGCTTTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFFQAS*NCFARF
Trigger: GAAGCGGGCAAAGCAATTCCATGAAGCTTGGAAAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTTCCAAGCTTCATaGAATTGCTTTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFFQAS*NCFARF
Trigger: GAAGCGGGCAAAGCAATTCCATGAAGCTTGGAAAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGTTTGATTTTGTCTaGGTCATTGGAAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKFDFV*VIGNLQ
Trigger: CTGGAGATTTCCAATGACCCAGACAAAATCAAACTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTTGGAAAACCTTATaGGCATCCATGAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFWKTL*ASMRFM
Trigger: CATGAACCTCATGGATGCCCATAAGGTTTTCCAAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTCCCAGTTCTTTTTaGAAAACCTTATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFPSSF*KTLWAS
Trigger: GGATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAATCTGTTCCACTTaGAATCTTTTTGCACACTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPICST*NLFAHL
Trigger: CAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAATCTGTTCCACTTaGAATCTTTTTGCACACTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPICST*NLFAHL
Trigger: CAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAGATGCCCCTTCTaGCAGGATGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLRCPF*QDEFLS
Trigger: AGAGAGAAATTCATCCTGCCAGAAGGGGCATCTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTAGCACTGGAAATTTaGGAGATGGTCCCAGTATAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLALEI*EMVPVY
Trigger: GTATACTGGGACCATCTCCCAAATTTCCAGTGCTAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTGTGAAAGAAATTaGGATTCACAGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFCERN*DSQGFL
Trigger: TAGGAAGCCCTGTGAATCCCAATTTCTTTCACAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGATAAGTTCTGTCTaGTCAGCAGTGTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLISSV*SAVSTK
Trigger: TTTGGTAGACACTGCTGACCAGACAGAACTTATCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAATACCTCTATCAATaGACTGCAAAACTGTTAACG +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEYLYQ*TAKLLT
Trigger: CGTTAACAGTTTTGCAGTCCATTGATAGAGGTATTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCAATTGTAACTTCCTaGTCCAACTCTTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPIVTS*SNSSSE
Trigger: TTCTGAGGAAGAGTTGGACCAGGAAGTTACAATTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGATAATGGTTCTTTCTaGACAGTACTAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDNGSF*TVLAVS
Trigger: AGAAACTGCTAGTACTGTCCAGAAAGAACCATTATC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTATGGGACCTTGTTaGGTCCATAGGTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFMGPC*VHRYFL
Trigger: CAAGAAATACCTATGGACCCAACAAGGTCCCATAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTATGGGACCTTGTTaGGTCCATAGGTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFMGPC*VHRYFL
Trigger: CAAGAAATACCTATGGACCCAACAAGGTCCCATAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCTCTTTCAATTTATaGGACCTTGTTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSASFNL*DLVGSI
Trigger: TATGGACCCAACAAGGTCCCATAAATTGAAAGAGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTCATATCCTTGTATaGTTGGAGAGTGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFHILV*LESVTQ
Trigger: CTGAGTCACACTCTCCAACCATACAAGGATATGAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTCATATCCTTGTATaGTTGGAGAGTGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFHILV*LESVTQ
Trigger: CTGAGTCACACTCTCCAACCATACAAGGATATGAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGAGACAGATCCTGTaGGTGCTCAGATATAAAGAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKRQIL*VLRYKE
Trigger: CTCTTTATATCTGAGCACCCACAGGATCTGTCTCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGAGACAGATCCTGTaGGTGCTCAGATATAAAGAG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKRQIL*VLRYKE
Trigger: CTCTTTATATCTGAGCACCCACAGGATCTGTCTCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGAGGTCAGGACAATaGCTGTCCTTGACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWRSGQ*LSLTAL
Trigger: TAAAGCTGTCAAGGACAGCCATTGTCCTGACCTCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCATAGAGATCATTaGTGTGCTTGCGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLHRDH*CACGPS
Trigger: TGAAGGTCCGCAAGCACATCAATGATCTCTATGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAAGGCATCATAAATTaGAGACACGTAAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEGIIN*RHVSDY
Trigger: GTAATCACTTACGTGTCTTCAATTTATGATGCCTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGGAAAAGATTTATCTaGCATCAAGATCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGKRFI*HQDRML
Trigger: CAGCATACGATCTTGATGTCAGATAAATCTTTTCCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGGAAAAGATTTATCTaGCATCAAGATCGTATGCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGKRFI*HQDRML
Trigger: CAGCATACGATCTTGATGTCAGATAAATCTTTTCCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTTCTGCTTTCAGGTaGGTAGTGGTTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGSAFR*VVVKVE
Trigger: CTCTACTTTAACCACTACTCACCTGAAAGCAGAACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATTCGGTGGGGGAATaGGAAAGCAAACTGATGGAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYSVGE*ESKLME
Trigger: TTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTGGGAAAATTTTTaGCATTGGTCCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCWENF*HWSNFV
Trigger: GACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCTGGGAAAATTTTTaGCATTGGTCCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICWENF*HWSNFV
Trigger: GACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCGGAGAGCATCACTaGTATATTTTACATGCTGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAGEHH*YILHAE
Trigger: CTCAGCATGTAAAATATATCAGTGATGCTCTCCGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCTSVR*GSCSLC
Trigger: ACACAAGGAACAACTACCTCATCTCACACTAGTGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCCTTCTCTCCTTCTaGAAGCTTATGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFLLSF*KLMAML
Trigger: AAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNESVVS*IGLQSR
Trigger: CCTGGACTGTAGGCCTATTCAAGAAACTACAGATTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAAACATGTCACACTaGATCTCTGTAAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSNMSH*ISVRSL
Trigger: CAAAGATCTTACAGAGATTCAGTGTGACATGTTTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAAACATGTCACACTaGATCTCTGTAAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSNMSH*ISVRSL
Trigger: CAAAGATCTTACAGAGATTCAGTGTGACATGTTTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTTCCTTTACTTTCTaGATTTTAGGGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHASFTF*ILGEFC
Trigger: ACAGAATTCCCCTAAAATTCAGAAAGTAAAGGAAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTTTCTGCTTCTTGTaGGTTGGGATAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVFCFL*VGIGLQ
Trigger: CTGAAGACCTATCCCAACTCACAAGAAGCAGAAAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTCCCATCGGGAATTaGGGTCCTCTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFPIGN*GPLAFS
Trigger: AGAAAATGCAAGAGGACCTCAATTCCCGATGGGAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAACCCACTTCTGACTaGTGCTTTGCAGATCTTTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQPTSD*CFADLC
Trigger: ACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILFLKN*SECQQH
Trigger: GTGCTGCTGACATTCTGATCAATTCTTCAGAAATAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLFLKN*SECQQH
Trigger: GTGCTGCTGACATTCTGATCAATTCTTCAGAAATAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTTTCAATATTCTTaGAGCTTTCCTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSFQYS*SFPGTP
Trigger: AGGAGTTCCAGGAAAGCTTCAAGAATATTGAAAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTTTTCAATATTCTTaGAGCTTTCCTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFQYS*SFPGTP
Trigger: AGGAGTTCCAGGAAAGCTTCAAGAATATTGAAAAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCAGGTCAGCCAATTaGGAAAACATTTCTCGGACT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSRSAN*ENISRT
Trigger: AGTCCGAGAAATGTTTTCTCAATTGGCTGACCTGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATCTTTGTGTCGAATaGTGTCAATGGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINLCVE*CQWRKP
Trigger: AGGCTTTCTCCATTGACATCATTCGACACAAAGATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAATCTTTGTGTCGAATaGTGTCAATGGAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNLCVE*CQWRKP
Trigger: AGGCTTTCTCCATTGACATCATTCGACACAAAGATT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQKNTI*SSLSWI
Trigger: AATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCATCTCATTTAACTaGTCTTTGACAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFISFN*SLTVLR
Trigger: CCTCAACACTGTCAAAGATCAGTTAAATGAGATGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCATCTCATTTAACTaGTCTTTGACAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFISFN*SLTVLR
Trigger: CCTCAACACTGTCAAAGATCAGTTAAATGAGATGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATTCACCCTGGTGATTaGGTTTTTCCATCTCAATTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIHPGD*VFPSQF
Trigger: AAATTGAGATGGAAAAACTCAATCACCAGGGTGAAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCAATTCACCCTGGTaGTTGAGTTTTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIINSPW*LSFSIS
Trigger: TGAGATGGAAAAACTCAATCACCAGGGTGAATTGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTTCTCCATTCTATTaGGTTCTAAGAGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGSPFY*VLRGNL
Trigger: AAGATTTCCTCTTAGAACTCAATAGAATGGAGAACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGTTCTCCATTCTATTaGGTTCTAAGAGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGSPFY*VLRGNL
Trigger: AAGATTTCCTCTTAGAACTCAATAGAATGGAGAACC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGATCTGGTCTCGATaGTCATTTACTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMIWSR*SFTSLA
Trigger: TGCTAATGAAGTAAATGATCATCGAGACCAGATCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGATCTGGTCTCGATaGTCATTTACTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMIWSR*SFTSLA
Trigger: TGCTAATGAAGTAAATGATCATCGAGACCAGATCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTGATCCAGTTCAATaGTCTGGTCTCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFDPVQ*SGLDDH
Trigger: ATGATCATCGAGACCAGATCATTGAACTGGATCAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTGATCCAGTTCAATaGTCTGGTCTCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFDPVQ*SGLDDH
Trigger: ATGATCATCGAGACCAGATCATTGAACTGGATCAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAACTGGTTCCCTGTTTaGTCCAGTTCAATGATCTGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNWFPV*SSSMIW
Trigger: CCAGATCATTGAACTGGATCAAACAGGGAACCAGTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKLSSF*VSPASK
Trigger: TTTGCTTGCTGGTGATACTCAGAAACTTGACAACTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCTACTTTCTTCATaGATTCCTTATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLLSS*IPYGCQ
Trigger: TTGACACCCATAAGGAATTCATGAAGAAAGTAGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAAGACTTGATGCAATaGAGCCTTGATGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEDLMQ*SLDEKL
Trigger: AAGCTTTTCATCAAGGCTTCATTGCATCAAGTCTTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCAACCCTGACTCTTaGTGGATGATACATCTCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFNPDS*WMIHLC
Trigger: GCAGAGATGTATCATCCATCAAGAGTCAGGGTTGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGGAAGAATTACTTaGCAGTCATCTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSGRIT*QSSLDV
Trigger: AACATCCAGAGATGACTGTCAAGTAATTCTTCCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGCTTCTTGTTCTTTaGGGAAAAGCTCCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWLLVL*GKAPFQ
Trigger: CTGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACTTGGAATGTCTTTaGTGGTCTTCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHLECL*WSSLVL
Trigger: AAGAACAAGTGAAGACCATCAAAGACATTCCAAGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGAGACTTTATGAGTaGTGTTCCAGTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLRLYE*CSSFTW
Trigger: CCAAGTGAAACTGGAACATCACTCATAAAGTCTCAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATTTCTGGCCATAAATaGAATCCCCCAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNISGHK*NPPSSH
Trigger: GTGGGAACTTGGGGGATTTCATTTATGGCCAGAAAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCCATGCATCACCCCTaGAGGCAATTCTGTTTTATT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPMHHP*RQFCFI
Trigger: AATAAAACAGAATTGCCTTCAGGGGTGATGCATGGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTCTTTTCCAAAGCTaGTGCCAATGTCACTCTTTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFLFQS*CQCHSF
Trigger: AAAAGAGTGACATTGGCATCAGCTTTGGAAAAGAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGAATCTAGATAACTaGTACCTTCTGTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKNLDN*YLLSLE
Trigger: CTCTAGAGACAGAAGGTATCAGTTATCTAGATTCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTACTTTAGATTTCTaGTGTCCACAAGACTTGTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVTLDF*CPQDLW
Trigger: CCACAAGTCTTGTGGACATCAGAAATCTAAAGTAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAGATATAAAGAGCTaGATATCCAAAGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISDIKS*ISKARA
Trigger: TGCCCTTGCTTTGGATATTCAGCTCTTTATATCTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAAACATGTCACACTaGATCTCTGTAAGATCTGTT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSNMSH*ISVRSV
Trigger: AACAGATCTTACAGAGATTCAGTGTGACATGTTTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134458.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATTCTGTATCTTGTTTaGAATCTGCAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHILYLV*NLQQQF
Trigger: GAATTGCTGCTGCAGATTGCAAACAAGATACAGAAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTCTGTATCTTGTTTaGAATCTGCAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLILYLV*NLQQQF
Trigger: GAATTGCTGCTGCAGATTGCAAACAAGATACAGAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATACAAATCGAAGATTaGCTTCGTCTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIQIED*LRLQRM
Trigger: CATCCTCTGAAGACGAAGGCAATCTTCGATTTGTAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACACTGGTATGGATATaGTGCTGTGTTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTLVWI*CCVSNC
Trigger: GCAGTTGGAAACACAGCAGCATATCCATACCAGTGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATGCCTCTACTGTTTaGTTAGCTGGGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYASTV*LAGWFS
Trigger: TGAGAACCACCCAGCTAAGCAAACAGTAGAGGCATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAACTGGAAGTAAGCTaGATTCTCTTTTACATGTTG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHELEVS*ILFYML
Trigger: CAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRSDLK*CKSSCV
Trigger: CACACAGGAGGATTTGCAGCATTTGAGATCTGACCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTTGTGTATTTCTTaGCAGAGTAGACACCCAACC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLCIS*QSRHPT
Trigger: GGTTGGGTGTCTACTCTGGCAAGAAATACACAAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTCATATTGCTCCTTTaGCTGATGAAGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLILLL*LMKFFS
Trigger: CGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCATATTGCTCCTTTaGCTGATGAAGTTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILILLL*LMKFFS
Trigger: CGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGTGTATCTTTCTGTTaGATCCTTCAGTTTTTCATT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGVSFC*ILQFFI
Trigger: AATGAAAAACTGAAGGATGCAACAGAAAGATACACC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATTCTTCCTGTAACTaGTTTGTTGTTGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINSSCN*FVVASC
Trigger: GCAGCTTGCAACAACAAAGCAGTTACAGGAAGAATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGTTTTCCATGAACTaGTGCAGCTTGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLFSMN*CSLLES
Trigger: GCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSVVTR*SRVSRF
Trigger: GAACCTAGATACTCTGGAGCACCTGGTTACTACACT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCCTTGTTAGATTCTaGTTGGGCTTTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLVRF*LGFYCF
Trigger: GAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCCTTGTTAGATTCTaGTTGGGCTTTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLVRF*LGFYCF
Trigger: GAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAATTGAGGTCCTCTTaGATTTTCTTCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLELRSS*IFFQFS
Trigger: AGAAAACTGGAAGAAAATGCAAGAGGACCTCAATTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMLLPS*FKFLQH
Trigger: ATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCTCATCAAACATTTaGTGGAATTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSSNI*WNCWVL
Trigger: CAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGCCGTTCCAATTTTaGAGAAATTGGGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEPFQF*RNWAVF
Trigger: AAAAACTGCCCAATTTCTGCAAAATTGGAACGGCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTAAAATCTGCTAGTTaGTGGTTGATGACATCCACT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLKSAS*WLMTST
Trigger: AGTGGATGTCATCAACCAGCAACTAGCAGATTTTAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTAAAATCTGCTAGTTaGTGGTTGATGACATCCACT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLKSAS*WLMTST
Trigger: AGTGGATGTCATCAACCAGCAACTAGCAGATTTTAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGATCAGTTTGTACTaGTCGTTGGCATCAGACACA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLISLY*SLASDT
Trigger: TGTGTCTGATGCCAACGAGCAGTACAAACTGATCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGKNQI*SKDSNE
Trigger: TTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATTCATCTCATCAATaGTCTTCTTCACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYSSHQ*SSSLQA
Trigger: AGCCTGAAGTGAAGAAGAGCATTGATGAGATGAATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATTCATCTCATCAATaGTCTTCTTCACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYSSHQ*SSSLQA
Trigger: AGCCTGAAGTGAAGAAGAGCATTGATGAGATGAATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCTGTAGGTTTAGATaGAGAAAGTTGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCRFR*RKLVLH
Trigger: ATGGAGAACCAACTTTCTGCATCTAAACCTACAGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCTGTAGGTTTAGATaGAGAAAGTTGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSCRFR*RKLVLH
Trigger: ATGGAGAACCAACTTTCTGCATCTAAACCTACAGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCGATGTTTAAACTCTaGTCTGCTAGAGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAMFKL*SARVSQ
Trigger: CTGGCTTACTCTAGCAGAGCAGAGTTTAAACATCGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTAGCAAAAACCTTGTaGTCTTCTATCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLAKTL*SSIWER
Trigger: TCTTTCCCAGATAGAAGAGCACAAGGTTTTTGCTAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCTCCCACCGAGACTaGACACTAACCAACAAATTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFSHRD*TLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGATTCAAGGACTTTCTaGTACCACTGCGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDSRTF*YHCGIS
Trigger: AGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIFNLI*ISCWPI
Trigger: TATCGGCCAACAACTGATGCAGATAAGATTGAAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATA +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIFNLI*ISCWPI
Trigger: TATCGGCCAACAACTGATGCAGATAAGATTGAAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACTTGGAATCTTTTTaGACACTTGCACTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHLESF*TLALSH
Trigger: GTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCCAAAACCTTCAATaGAGAAGCAAAGTCTACTTT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFQNLQ*RSKVYF
Trigger: AAAGTAGACTTTGCTTCTGCATTGAAGGTTTTGGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAGATCTTGAAGTTTaGCTTGCAGTTCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSDLEV*LAVPCA
Trigger: GGCACAAGGAACTGCAAGGCAAACTTCAAGATCTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTTTTCTCTCTCCTTaGCCAGTATTTCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILFLSP*PVFPFL
Trigger: AAGAAACGGAAATACTGGCCAAGGAGAGAGAAAAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTTTTCTCTCTCCTTaGCCAGTATTTCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLFLSP*PVFPFL
Trigger: AAGAAACGGAAATACTGGCCAAGGAGAGAGAAAAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSTLV*ICCCVS
Trigger: GGAAACACAGCAGCATATCCATACCAGTGTGGAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGAAGTAGGTTTTCTTaGCTGAGATATTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRSRFS*LRYWDY
Trigger: GTAATCCCAATATCTCAGCCAAGAAAACCTACTTCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTTTCATAACCTGGTaGCACTCTCCTGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFFITW*HSPGAK
Trigger: CTTAGCACCAGGAGAGTGCCACCAGGTTATGAAAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGATTTCATCAGGTGCTaGAAGTGGGCTTTACAAGCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDFIRC*KWALQA
Trigger: AGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLGAG*RLNLFE
Trigger: CTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTCAGTCTTGGAGCTaGCTGGAGACTGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCQSWS*LETEFV
Trigger: AACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCTCAGAACTTCCTaGATACTTTCTACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLRTS*ILSTSD
Trigger: ATCTGAGGTAGAAAGTATCCAGGAAGTTCTGAGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTCTCAGAACTTCCTaGATACTTTCTACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLRTS*ILSTSD
Trigger: ATCTGAGGTAGAAAGTATCCAGGAAGTTCTGAGAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTTATGGCCATGCTTaGCTAAGAAGATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAYGHA*LRRSVK
Trigger: CTTCACAGATCTTCTTAGCCAAGCATGGCCATAAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGTGGCAAATGAGGTaGAATGACTCTGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQWQMR*NDSECH
Trigger: GTGACATTCAGAGTCATTCCACCTCATTTGCCACTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTCAAATTCCTTGTaGTCTTGCAGGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFSNSL*SCRNFC
Trigger: GCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTTCAAATTCCTTGTaGTCTTGCAGGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFSNSL*SCRNFC
Trigger: GCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTCAAGTCTCCTTTGTaGGAAATGACATCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLKSPL*EMTSSE
Trigger: CTCTGAGGATGTCATTTCCCACAAAGGAGACTTGAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTTCTACAGGTACTTaGTGTTCAGCCAATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFSTGT*CSANSS
Trigger: GGAAGAATTGGCTGAACACCAAGTACCTGTAGAAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTGCTCCTGGCAAGTaGATGCATCTTTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTAPGK*MHLSLF
Trigger: AAAGAGAGAAAGATGCATCCACTTGCCAGGAGCAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGTTAGATTCTGCTTaGGCTTTTACTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLLDSA*AFTVSV
Trigger: GACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTTTAACAATAGCTTaGTCAATTTGGCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLTIA*SIWLER
Trigger: CCGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTTTAACAATAGCTTaGTCAATTTGGCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLTIA*SIWLER
Trigger: CCGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCAGGTCTTGGTATTaGGTACTTTTAACAATAGCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRSWY*VLLTIA
Trigger: AGCTATTGTTAAAAGTACCCAATACCAAGACCTGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAGTCGCTGTCCAATaGCCTTCACCTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSVAVQ*PSPFLI
Trigger: TATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCAAACATTTGCTaGAATTGCTGGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSNIC*NCWVLA
Trigger: TGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISNLRA*ILLRKS
Trigger: GCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTATACTCAGCAGATaGAGGCTTCTGATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFILSR*RLLIGY
Trigger: ATAGCCAATCAGAAGCCTCCATCTGCTGAGTATAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTTGTACTGCTCGTTaGCATCAGACACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVCTAR*HQTQVY
Trigger: ATAAACTTGTGTCTGATGCCAACGAGCAGTACAAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTTGTACTGCTCGTTaGCATCAGACACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVCTAR*HQTQVY
Trigger: ATAAACTTGTGTCTGATGCCAACGAGCAGTACAAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATGTTTCCCAAAACTaGTTCACTAAGACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYVSQN*FTKTCA
Trigger: AGCACAGGTCTTAGTGAACCAGTTTTGGGAAACATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATGTTTCCCAAAACTaGTTCACTAAGACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYVSQN*FTKTCA
Trigger: AGCACAGGTCTTAGTGAACCAGTTTTGGGAAACATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPGSPT*VQFYHE
Trigger: TTCATGATAAAATTGAACCCATGTTGGAGACCCTGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGCTTGATGATGGATaGGTCAATACCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLDDG*VNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAACTTCAATGACTTTTaGGTCTCCACTTATCGGTCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINFNDF*VSTYRS
Trigger: AGACCGATAAGTGGAGACCCAAAAGTCATTGAAGTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAACTTCAATGACTTTTaGGTCTCCACTTATCGGTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNFNDF*VSTYRS
Trigger: AGACCGATAAGTGGAGACCCAAAAGTCATTGAAGTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTTGGCTCTCAGCTaGGAATGTAGTTCCATATGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLALS*ECSSIC
Trigger: ACATATGGAACTACATTCCCAGCTGAGAGCCAAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCSKSG*EERRCL
Trigger: TAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAGTTTGATTTTGTCTaGGTCATTGGAAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKFDFV*VIGNLQ
Trigger: CTGGAGATTTCCAATGACCCAGACAAAATCAAACTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGTTTGATTTTGTCTaGGTCATTGGAAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKFDFV*VIGNLQ
Trigger: CTGGAGATTTCCAATGACCCAGACAAAATCAAACTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTTGGAAAACCTTATaGGCATCCATGAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFWKTL*ASMRFM
Trigger: CATGAACCTCATGGATGCCCATAAGGTTTTCCAAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTGGAAAACCTTATaGGCATCCATGAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFWKTL*ASMRFM
Trigger: CATGAACCTCATGGATGCCCATAAGGTTTTCCAAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCATGAATTCCTTATaGGTGTCAATGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFMNSL*VSMRDC
Trigger: ACAATCTCTCATTGACACCCATAAGGAATTCATGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCAATCTGTTCCACTTaGAATCTTTTTGCACACTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPICST*NLFAHL
Trigger: CAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCTGTGAAAGAAATTaGGATTCACAGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFCERN*DSQGFL
Trigger: TAGGAAGCCCTGTGAATCCCAATTTCTTTCACAGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTCTAAAATCCTTGTaGCTGTCTCCTTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPLKSL*LSPCQA
Trigger: TGCTTGACAAGGAGACAGCCACAAGGATTTTAGAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAATACCTCTATCAATaGACTGCAAAACTGTTAACG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEYLYQ*TAKLLT
Trigger: CGTTAACAGTTTTGCAGTCCATTGATAGAGGTATTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCCCACTAAAGTCCTaGATCTCTTGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFPLKS*ISWISL
Trigger: AAGAGAAATCCAAGAGATCCAGGACTTTAGTGGGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGTACATCTGAAATTTaGGGTTCTTCATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGTSEI*GSSSDS
Trigger: GGAATCAGATGAAGAACCCCAAATTTCAGATGTACC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTACATCTGAAATTTaGGGTTCTTCATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGTSEI*GSSSDS
Trigger: GGAATCAGATGAAGAACCCCAAATTTCAGATGTACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTCCTTTGGAAATGTaGGGTACATCTGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSPLEM*GTSEIW
Trigger: CCAAATTTCAGATGTACCCCACATTTCCAAAGGAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAATATATAGGTCTTaGACATCAGTAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVIYRS*TSVVSC
Trigger: ACAGGAGACTACTGATGTCCAAGACCTATATATTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTATGGGACCTTGTTaGGTCCATAGGTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFMGPC*VHRYFL
Trigger: CAAGAAATACCTATGGACCCAACAAGGTCCCATAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGGTTGAATCTGTTTaGTTCTCATTTCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKVESV*FSFQCP
Trigger: GGGACATTGAAATGAGAACCAAACAGATTCAACCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCAGGAACTTCTTGTaGCTGACTGATAACAATCCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSRNFL*LTDNNP
Trigger: CGGATTGTTATCAGTCAGCCACAAGAAGTTCCTGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAAGGCATCATAAATTaGAGACACGTAAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEGIIN*RHVSDY
Trigger: GTAATCACTTACGTGTCTTCAATTTATGATGCCTTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTAGGTTTTCTTGGCTaGGATATTGGGATTACTGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVGFLG*DIGITV
Trigger: GACAGTAATCCCAATATCTCAGCCAAGAAAACCTAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLRGFS*TMVFDL
Trigger: GAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAATGAGAAAGCAAACTaGTGGAACCATTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNEKAN*WNHCLV
Trigger: AACGAGGCAATGGTTCCATCAGTTTGCTTTCTCATT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAAACATGTCACACTaGATCTCTGTAAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISNMSH*ISVRSL
Trigger: CAAAGATCTTACAGAGATTCAGTGTGACATGTTTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAAACATGTCACACTaGATCTCTGTAAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSNMSH*ISVRSL
Trigger: CAAAGATCTTACAGAGATTCAGTGTGACATGTTTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTTCCTTTACTTTCTaGATTTTAGGGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASFTF*ILGEFC
Trigger: ACAGAATTCCCCTAAAATTCAGAAAGTAAAGGAAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTTCCTTTACTTTCTaGATTTTAGGGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSASFTF*ILGEFC
Trigger: ACAGAATTCCCCTAAAATTCAGAAAGTAAAGGAAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTTTTCAATATTCTTaGAGCTTTCCTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFQYS*SFPGTP
Trigger: AGGAGTTCCAGGAAAGCTTCAAGAATATTGAAAAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCTCTAAGGCATCTTaGAATTTCCCACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGSKAS*NFPQCN
Trigger: GTTACATTGTGGGAAATTTCAAGATGCCTTAGAGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCATCTCATTTAACTaGTCTTTGACAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFISFN*SLTVLR
Trigger: CCTCAACACTGTCAAAGATCAGTTAAATGAGATGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCATCTCATTTAACTaGTCTTTGACAGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFISFN*SLTVLR
Trigger: CCTCAACACTGTCAAAGATCAGTTAAATGAGATGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATTCACCCTGGTGATTaGGTTTTTCCATCTCAATTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIHPGD*VFPSQF
Trigger: AAATTGAGATGGAAAAACTCAATCACCAGGGTGAAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATTCACCCTGGTGATTaGGTTTTTCCATCTCAATTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIHPGD*VFPSQF
Trigger: AAATTGAGATGGAAAAACTCAATCACCAGGGTGAAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTTCTCCATTCTATTaGGTTCTAAGAGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGSPFY*VLRGNL
Trigger: AAGATTTCCTCTTAGAACTCAATAGAATGGAGAACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGATCTGGTCTCGATaGTCATTTACTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMIWSR*SFTSLA
Trigger: TGCTAATGAAGTAAATGATCATCGAGACCAGATCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACAACATCCTGTTTCTaGCTAAGGAACTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTTSCF*LRNFNW
Trigger: CCAGTTGAAGTTCCTTAGTCAGAAACAGGATGTTGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCTACTTTCTTCATaGATTCCTTATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLLSS*IPYGCQ
Trigger: TTGACACCCATAAGGAATTCATGAAGAAAGTAGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCTACTTTCTTCATaGATTCCTTATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLLSS*IPYGCQ
Trigger: TTGACACCCATAAGGAATTCATGAAGAAAGTAGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGCCACTTGTCTTGTaGCCTCATCTTCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEPLVL*PHLQSY
Trigger: ATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTACCAAACCAAGATTTaGGGCCAAAGTTACCGAAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYQTKI*GQSYRK
Trigger: CTTTCGGTAACTTTGGCCTCAAATCTTGGTTTGGTA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTCTTTTCCAAAGCTaGTGCCAATGTCACTCTTTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFLFQS*CQCHSF
Trigger: AAAAGAGTGACATTGGCATCAGCTTTGGAAAAGAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTAAGCTCCAAAGGTTaGATCTGTTTGGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSSKG*ICLVLI
Trigger: AATGAGAACCAAACAGATTCAACCTTTGGAGCTTAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTAAGCTCCAAAGGTTaGATCTGTTTGGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSSKG*ICLVLI
Trigger: AATGAGAACCAAACAGATTCAACCTTTGGAGCTTAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGACAATGGCTGTCCTTaGCAGCTTTACTGTTTATCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDNGCP*QLYCLS
Trigger: TGATAAACAGTAAAGCTGTCAAGGACAGCCATTGTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR TCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCAATTCCAAGAATGTaGGTCAAAATAAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAIPRM*VKIKRV
Trigger: AACCCTCTTTATTTTGACTCACATTCTTGGAATTGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238555.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTTGTTTGCAATCTaGAGCAGCAATTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNILFAI*SSNSSL
Trigger: GAGGCTAGAATTGCTGCTGCAGATTGCAAACAAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATTCTGTATCTTGTTTaGAATCTGCAGCAGCAATTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIILYLV*NLQQQF
Trigger: GAATTGCTGCTGCAGATTGCAAACAAGATACAGAAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAACTGGAAGTAAGCTaGATTCTCTTTTACATGTTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSELEVS*ILFYML
Trigger: CAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGTGATTTCATCAGGTaGTGGAAGTGGGCTTTACAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSDFIR*WKWALQ
Trigger: TTGTAAAGCCCACTTCCAGCACCTGATGAAATCACT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAAAGCTTATGGCCATaGTTGGCTAAGAAGATCTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNESLWP*LAKKIC
Trigger: ACAGATCTTCTTAGCCAAGCATGGCCATAAGCTTTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGTCTTGTTGTTTCTaGAGAGTCTTTTGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVSCCF*RVFCSV
Trigger: GACGGAACAAAAGACTCTGCAGAAACAACAAGACAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTGTATCTTTCTGTTaGATCCTTCAGTTTTTCATT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGVSFC*ILQFFI
Trigger: AATGAAAAACTGAAGGATGCAACAGAAAGATACACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGTGTATCTTTCTGTTaGATCCTTCAGTTTTTCATT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGVSFC*ILQFFI
Trigger: AATGAAAAACTGAAGGATGCAACAGAAAGATACACC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAATTGAGGTCCTCTTaGATTTTCTTCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSELRSS*IFFQFS
Trigger: AGAAAACTGGAAGAAAATGCAAGAGGACCTCAATTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTACTGCTCACTCTTTaGTTCACTTCTAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLLTL*FTSKNS
Trigger: GGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCATTTTTCGACACTCTaGTTCAGAGTCCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHFSTL*FRVLYV
Trigger: GACATAGAGGACTCTGAAGCAGAGTGTCGAAAAATG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCAGTTTACCACACTaGTTATTAAGGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVSLPH*LLRASS
Trigger: GCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTAAAATCTGCTAGTTaGTGGTTGATGACATCCACT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILKSAS*WLMTST
Trigger: AGTGGATGTCATCAACCAGCAACTAGCAGATTTTAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATTCTGCCTCCTTCTaGTTGAAGCATATCCACTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYSASF*LKHIHC
Trigger: ACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGKNQI*SKDSNE
Trigger: TTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATTCATCTCATCAATaGTCTTCTTCACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYSSHQ*SSSLQA
Trigger: AGCCTGAAGTGAAGAAGAGCATTGATGAGATGAATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATTCATCTCATCAATaGTCTTCTTCACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYSSHQ*SSSLQA
Trigger: AGCCTGAAGTGAAGAAGAGCATTGATGAGATGAATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTAGCAAAAACCTTGTaGTCTTCTATCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILAKTL*SSIWER
Trigger: TCTTTCCCAGATAGAAGAGCACAAGGTTTTTGCTAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCATACACAGGCTGTTTaGCACCAAGAGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHTQAV*HQEFSE
Trigger: TTCAGAAAACTCTTGGTGGCAAACAGCCTGTGTATG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIFNLI*ISCWPI
Trigger: TATCGGCCAACAACTGATGCAGATAAGATTGAAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTTTTTGCACACTTaGACTGAGCCACTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIFLHT*TEPLVL
Trigger: CAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAGATACAATACCTTaGTCTAGAGCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVDTIP*SRASVI
Trigger: AATTACAGATGCTCTAGAGCAAGGTATTGTATCTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCCAAAACCTTCAATaGAGAAGCAAAGTCTACTTT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFQNLQ*RSKVYF
Trigger: AAAGTAGACTTTGCTTCTGCATTGAAGGTTTTGGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACAAGACTTGTGGTCTaGTTTGCTATCCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTRLVV*FAILTK
Trigger: CTTTGTGAGGATAGCAAAGCAGACCACAAGTCTTGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTAGTATGGAAATTCTaGGACATCTTTCCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLVWKF*DIFPSY
Trigger: GTACGAGGGAAAGATGTCCCAGAATTTCCATACTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGATCAGTTCAGCTGTaGCTCTGGAGACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRSVQL*LWRQIC
Trigger: ACAAATTTGTCTCCAGAGCCACAGCTGAACTGATCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAAGTAGGTTTTCTTaGCTGAGATATTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSRFS*LRYWDY
Trigger: GTAATCCCAATATCTCAGCCAAGAAAACCTACTTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGAAGTAGGTTTTCTTaGCTGAGATATTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRSRFS*LRYWDY
Trigger: GTAATCCCAATATCTCAGCCAAGAAAACCTACTTCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTAGCTGATGGCTCTTaGCCTTCCTCAAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVADGS*PSSKLF
Trigger: AAACAATTTTGAGGAAGGCCAAGAGCCATCAGCTAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACAAAGTGGCATCCATaGCTTTCAGGACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTKWHP*LSGLLL
Trigger: AAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGTTAGATTCTGCTTaGGCTTTTACTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLDSA*AFTVSV
Trigger: GACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCTTCTTGTGAGTTaGGATAGGTCTTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLLVS*DRSSVI
Trigger: GATTACTGAAGACCTATCCCAACTCACAAGAAGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGATCTTTGTGTACTTaGCTGGCAGATGGAGACATA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRSLCT*LADGDI
Trigger: TATGTCTCCATCTGCCAGCCAAGTACACAAAGATCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCAGGTCTTGGTATTaGGTACTTTTAACAATAGCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSRSWY*VLLTIA
Trigger: AGCTATTGTTAAAAGTACCCAATACCAAGACCTGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCAGGTCTTGGTATTaGGTACTTTTAACAATAGCT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISRSWY*VLLTIA
Trigger: AGCTATTGTTAAAAGTACCCAATACCAAGACCTGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTGGAGCAGGTCTTaGTATTGGGTACTTTTAACA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSWSRS*YWVLLT
Trigger: TGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTTCTGATAAGTCCTaGAGCAGGTCTTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFSDKS*SRSWYW
Trigger: CCAATACCAAGACCTGCTCCAGGACTTATCAGAAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCAACTTCTGTTCTTaGATCTGTGCTTTCACCACT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSNFCS*ICAFTT
Trigger: AGTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTAGATGCAGAAAGTTaGTTCTCCATTCTATTGAGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLDAES*FSILLS
Trigger: ACTCAATAGAATGGAGAACCAACTTTCTGCATCTAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTTTCCAAGCTTCATaGAATTGCTTTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFFQAS*NCFARF
Trigger: GAAGCGGGCAAAGCAATTCCATGAAGCTTGGAAAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGTTTGATTTTGTCTaGGTCATTGGAAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKFDFV*VIGNLQ
Trigger: CTGGAGATTTCCAATGACCCAGACAAAATCAAACTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCATGAATTCCTTATaGGTGTCAATGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFMNSL*VSMRDC
Trigger: ACAATCTCTCATTGACACCCATAAGGAATTCATGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCATGAATTCCTTATaGGTGTCAATGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFMNSL*VSMRDC
Trigger: ACAATCTCTCATTGACACCCATAAGGAATTCATGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATCAAAGTCAAAGTTaGCAAATTCTTTCAATTCCG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHQSQS*QILSIP
Trigger: CGGAATTGAAAGAATTTGCCAACTTTGACTTTGATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCATCAAAGTCAAAGTTaGCAAATTCTTTCAATTCCG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHQSQS*QILSIP
Trigger: CGGAATTGAAAGAATTTGCCAACTTTGACTTTGATG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLRHG*DFGRFG
Trigger: ACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTTTTCAGCTGTATTaGGGTCTATTAAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLFQLY*GLLNSW
Trigger: CCAAGAATTTAATAGACCCCAATACAGCTGAAAAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTTTTCAGCTGTATTaGGGTCTATTAAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLFQLY*GLLNSW
Trigger: CCAAGAATTTAATAGACCCCAATACAGCTGAAAAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTAGCACTGGAAATTTaGGAGATGGTCCCAGTATAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLALEI*EMVPVY
Trigger: GTATACTGGGACCATCTCCCAAATTTCCAGTGCTAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTTCCAGTTTCACTTaGAATGTCTTTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCSSFT*NVFDGL
Trigger: AAGACCATCAAAGACATTCCAAGTGAAACTGGAACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTTCCAGTTTCACTTaGAATGTCTTTGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICSSFT*NVFDGL
Trigger: AAGACCATCAAAGACATTCCAAGTGAAACTGGAACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAATTGTAACTTCCTaGTCCAACTCTTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPIVTS*SNSSSE
Trigger: TTCTGAGGAAGAGTTGGACCAGGAAGTTACAATTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTTCTGAAGATTTTTaGCATCTTTCTCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTSEDF*HLSLMP
Trigger: AGGCATTAGAGAAAGATGCCAAAAATCTTCAGAAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGAAGACACGTAAGTaGTTACAGACTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLKTRK*LQTSHL
Trigger: CAGATGAGAAGTCTGTAATCACTTACGTGTCTTCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTAGCATTTCAACAATaGGTTTCCCCCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLAFQQ*VSPILL
Trigger: AAGAAGAATGGGGGAAACTCATTGTTGAAATGCTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGGTATATTTTCGTTTaGTGGAGTCTTGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRYIFV*WSLGGF
Trigger: GAAACCTCCAAGACTCCATCAAACGAAAATATACCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCTGGGAAAATTTTTaGCATTGGTCCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCWENF*HWSNFV
Trigger: GACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLFLKN*SECQQH
Trigger: GTGCTGCTGACATTCTGATCAATTCTTCAGAAATAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAAGAGCTCATCCATTaGATCTTTGTGTCGAATGAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEELIH*IFVSND
Trigger: ATCATTCGACACAAAGATTCAATGGATGAGCTCTTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCAATTCACCCTGGTaGTTGAGTTTTTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNINSPW*LSFSIS
Trigger: TGAGATGGAAAAACTCAATCACCAGGGTGAATTGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTGATCCAGTTCAATaGTCTGGTCTCGATGATCAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFDPVQ*SGLDDH
Trigger: ATGATCATCGAGACCAGATCATTGAACTGGATCAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKLSSF*VSPASK
Trigger: TTTGCTTGCTGGTGATACTCAGAAACTTGACAACTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATACAAATCGAAGATTaGCTTCGTCTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIQIED*LRLQRM
Trigger: CATCCTCTGAAGACGAAGGCAATCTTCGATTTGTAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGTGTATCTTTCTGTTaGATCCTTCAGTTTTTCATT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGVSFC*ILQFFI
Trigger: AATGAAAAACTGAAGGATGCAACAGAAAGATACACC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCCTTGTTAGATTCTaGTTGGGCTTTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLVRF*LGFYCF
Trigger: GAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGCCGTTCCAATTTTaGAGAAATTGGGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEPFQF*RNWAVF
Trigger: AAAAACTGCCCAATTTCTGCAAAATTGGAACGGCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGKNQI*SKDSNE
Trigger: TTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGKNQI*SKDSNE
Trigger: TTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCTGTAGGTTTAGATaGAGAAAGTTGGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSCRFR*RKLVLH
Trigger: ATGGAGAACCAACTTTCTGCATCTAAACCTACAGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTAGATACAATACCTTaGTCTAGAGCATCTGTAATT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVDTIP*SRASVI
Trigger: AATTACAGATGCTCTAGAGCAAGGTATTGTATCTAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTTTTCTCTCTCCTTaGCCAGTATTTCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLFLSP*PVFPFL
Trigger: AAGAAACGGAAATACTGGCCAAGGAGAGAGAAAAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTTCAAATTCCTTGTaGTCTTGCAGGAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFSNSL*SCRNFC
Trigger: GCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTTTAACAATAGCTTaGTCAATTTGGCTGGAACGG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLTIA*SIWLER
Trigger: CCGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAAAGATTTCAAGCTaGTGTTTGGCTCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSKISS*CLAPST
Trigger: AGTTGAAGGAGCCAAACACCAGCTTGAAATCTTTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSNLRA*ILLRKS
Trigger: GCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTTGTACTGCTCGTTaGCATCAGACACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVCTAR*HQTQVY
Trigger: ATAAACTTGTGTCTGATGCCAACGAGCAGTACAAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATGTTTCCCAAAACTaGTTCACTAAGACCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYVSQN*FTKTCA
Trigger: AGCACAGGTCTTAGTGAACCAGTTTTGGGAAACATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPGSPT*VQFYHE
Trigger: TTCATGATAAAATTGAACCCATGTTGGAGACCCTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAACTTCAATGACTTTTaGGTCTCCACTTATCGGTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNFNDF*VSTYRS
Trigger: AGACCGATAAGTGGAGACCCAAAAGTCATTGAAGTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTAGATGCAGAAAGTTaGTTCTCCATTCTATTGAGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILDAES*FSILLS
Trigger: ACTCAATAGAATGGAGAACCAACTTTCTGCATCTAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTCCCAGTTCTTTTTaGAAAACCTTATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFPSSF*KTLWAS
Trigger: GGATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCATGAATTCCTTATaGGTGTCAATGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFMNSL*VSMRDC
Trigger: ACAATCTCTCATTGACACCCATAAGGAATTCATGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCATGAATTCCTTATaGGTGTCAATGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFMNSL*VSMRDC
Trigger: ACAATCTCTCATTGACACCCATAAGGAATTCATGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATCAAAGTCAAAGTTaGCAAATTCTTTCAATTCCG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHQSQS*QILSIP
Trigger: CGGAATTGAAAGAATTTGCCAACTTTGACTTTGATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATCAAAGTCAAAGTTaGCAAATTCTTTCAATTCCG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHQSQS*QILSIP
Trigger: CGGAATTGAAAGAATTTGCCAACTTTGACTTTGATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAATCTGTTCCACTTaGAATCTTTTTGCACACTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPICST*NLFAHL
Trigger: CAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTTTTCAGCTGTATTaGGGTCTATTAAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLFQLY*GLLNSW
Trigger: CCAAGAATTTAATAGACCCCAATACAGCTGAAAAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACTTTGTGGGAGTTTaGCATTTTGACTTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHFVGV*HFDFSV
Trigger: TACTGAGAAGTCAAAATGCCAAACTCCCACAAAGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTGGCTTTGTTTGTaGCCATCCTTAACCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSWLCL*PSLTKS
Trigger: ACTTTTGGTTAAGGATGGCCACAAACAAAGCCAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGATAAGTTCTGTCTaGTCAGCAGTGTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLISSV*SAVSTK
Trigger: TTTGGTAGACACTGCTGACCAGACAGAACTTATCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCCCACTAAAGTCCTaGATCTCTTGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFPLKS*ISWISL
Trigger: AAGAGAAATCCAAGAGATCCAGGACTTTAGTGGGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGGACTTAAGATGCTaGCAGATACTTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKDLRC*QILYYL
Trigger: CAGATAATAAAGTATCTGCCAGCATCTTAAGTCCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGGACTTAAGATGCTaGCAGATACTTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKDLRC*QILYYL
Trigger: CAGATAATAAAGTATCTGCCAGCATCTTAAGTCCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTTCTGAAGATTTTTaGCATCTTTCTCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTSEDF*HLSLMP
Trigger: AGGCATTAGAGAAAGATGCCAAAAATCTTCAGAAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAAGGCATCATAAATTaGAGACACGTAAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEGIIN*RHVSDY
Trigger: GTAATCACTTACGTGTCTTCAATTTATGATGCCTTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAAACATGTCACACTaGATCTCTGTAAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSNMSH*ISVRSL
Trigger: CAAAGATCTTACAGAGATTCAGTGTGACATGTTTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTTCCTTTACTTTCTaGATTTTAGGGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASFTF*ILGEFC
Trigger: ACAGAATTCCCCTAAAATTCAGAAAGTAAAGGAAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTTTCAATATTCTTaGAGCTTTCCTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFQYS*SFPGTP
Trigger: AGGAGTTCCAGGAAAGCTTCAAGAATATTGAAAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATTCACCCTGGTGATTaGGTTTTTCCATCTCAATTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIHPGD*VFPSQF
Trigger: AAATTGAGATGGAAAAACTCAATCACCAGGGTGAAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTTCTCCATTCTATTaGGTTCTAAGAGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGSPFY*VLRGNL
Trigger: AAGATTTCCTCTTAGAACTCAATAGAATGGAGAACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGATCTGGTCTCGATaGTCATTTACTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMIWSR*SFTSLA
Trigger: TGCTAATGAAGTAAATGATCATCGAGACCAGATCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGATTTTGAGACTTTATaGGTGATGTTCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDFETL*VMFQFH
Trigger: GTGAAACTGGAACATCACTCATAAAGTCTCAAAATC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTCTTTTCCAAAGCTaGTGCCAATGTCACTCTTTT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFLFQS*CQCHSF
Trigger: AAAAGAGTGACATTGGCATCAGCTTTGGAAAAGAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR TCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGAATCTAGATAACTaGTACCTTCTGTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKNLDN*YLLSLE
Trigger: CTCTAGAGACAGAAGGTATCAGTTATCTAGATTCTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAACTGGAAGTAAGCTaGATTCTCTTTTACATGTTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNELEVS*ILFYML
Trigger: CAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTAAAATCTGCTAGTTaGTGGTTGATGACATCCACT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLKSAS*WLMTST
Trigger: AGTGGATGTCATCAACCAGCAACTAGCAGATTTTAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATTCATCTCATCAATaGTCTTCTTCACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYSSHQ*SSSLQA
Trigger: AGCCTGAAGTGAAGAAGAGCATTGATGAGATGAATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIFNLI*ISCWPI
Trigger: TATCGGCCAACAACTGATGCAGATAAGATTGAAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGAAGTAGGTTTTCTTaGCTGAGATATTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRSRFS*LRYWDY
Trigger: GTAATCCCAATATCTCAGCCAAGAAAACCTACTTCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTTCAGCCATTTCTaGAAGGTTCTAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFSHF*KVLISF
Trigger: GAAACTGATTAGAACCTTCCAGAAATGGCTGAAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGTTAGATTCTGCTTaGGCTTTTACTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLDSA*AFTVSV
Trigger: GACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCAGGTCTTGGTATTaGGTACTTTTAACAATAGCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSRSWY*VLLTIA
Trigger: AGCTATTGTTAAAAGTACCCAATACCAAGACCTGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGTTTGATTTTGTCTaGGTCATTGGAAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKFDFV*VIGNLQ
Trigger: CTGGAGATTTCCAATGACCCAGACAAAATCAAACTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAATACCTCTATCAATaGACTGCAAAACTGTTAACG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEYLYQ*TAKLLT
Trigger: CGTTAACAGTTTTGCAGTCCATTGATAGAGGTATTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGATAATGGTTCTTTCTaGACAGTACTAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDNGSF*TVLAVS
Trigger: AGAAACTGCTAGTACTGTCCAGAAAGAACCATTATC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTAATATATAGGTCTTaGACATCAGTAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVIYRS*TSVVSC
Trigger: ACAGGAGACTACTGATGTCCAAGACCTATATATTAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGGTTGAATCTGTTTaGTTCTCATTTCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKVESV*FSFQCP
Trigger: GGGACATTGAAATGAGAACCAAACAGATTCAACCTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTGTATCTTTCTGTTaGATCCTTCAGTTTTTCATT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGVSFC*ILQFFI
Trigger: AATGAAAAACTGAAGGATGCAACAGAAAGATACACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR GCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGKNQI*SKDSNE
Trigger: TTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAGTTCAACCAACTaGTTTTGTAAAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSSTN*FCKVFF
Trigger: GAAAAAGACTTTACAAAACCAGTTGGTTGAACTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTAGATGCAGAAAGTTaGTTCTCCATTCTATTGAGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLDAES*FSILLS
Trigger: ACTCAATAGAATGGAGAACCAACTTTCTGCATCTAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCATGAATTCCTTATaGGTGTCAATGAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFMNSL*VSMRDC
Trigger: ACAATCTCTCATTGACACCCATAAGGAATTCATGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCATCAAAGTCAAAGTTaGCAAATTCTTTCAATTCCG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHQSQS*QILSIP
Trigger: CGGAATTGAAAGAATTTGCCAACTTTGACTTTGATG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CCA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGGACTTAAGATGCTaGCAGATACTTTATTATCTG +
Preference number: 4 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKDLRC*QILYYL
Trigger: CAGATAATAAAGTATCTGCCAGCATCTTAAGTCCTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp GCGTCTCTAGAAGGTCAAAGTCAGAGGCGTCGCTTCCTCGCCGGCTaGTGGCTCGACTGCCGGCCCGACTGCCAGCCCGACTCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ASLEGQSQRRRFLAG*WLDCRPDCQPDSQD
Trigger: GTCCTGGGAGTCGGGCTGGCAGTCGGGCCGGCAGTCGAGCCAGCAGCCGGCGAGGAAGCGACGCCTCTGACTTTGACCTTCTAGAGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TCTCTAGAAGGTCAAAGTCAGAGGCGTCGCTTCCTCGCCGGCTGCTaGCTCGACTGCCGGCCCGACTGCCAGCCCGACTCCCAGGACGGC +
Preference number: 5 (lower is better)
Translates to: SLEGQSQRRRFLAGC*LDCRPDCQPDSQDG
Trigger: GCCGTCCTGGGAGTCGGGCTGGCAGTCGGGCCGGCAGTCGAGCCAGCAGCCGGCGAGGAAGCGACGCCTCTGACTTTGACCTTCTAGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp ACTGCCAGCCCGACTCCCAGGACGGCTGGCAGACTTCTTAGGGTCTaGCCGGTTGGCTTTGGCACCTGTGGAGGCTGGGGAAGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: TASPTPRTAGRLLRV*PVGFGTCGGWGRAV
Trigger: AACAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAAGAAGTCTGCCAGCCGTCCTGGGAGTCGGGCTGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CTCCGGGGTCAGAGGCAACTGTGTCTGAGAGAAGCTTCCCCACGCTaGCCTCACAAGTCAACACCCAGGCCTGCAGGCTGTCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LRGQRQLCLREASPR*PHKSTPRPAGCQRC
Trigger: GCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGACTTGTGAGGCCAGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCTGACCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TGGCCCCCGGCAGCACTGCTCTCTGAAGTGTCTGAGCAAGCCGACTaGGTCTCTAGAAGGTCAAAGTCAGAGGCGTCGCTTCCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: WPPAALLSEVSEQAD*VSRRSKSEASLPRR
Trigger: CCGGCGAGGAAGCGACGCCTCTGACTTTGACCTTCTAGAGACGCAGTCGGCTTGCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGCAGGGAGCTCTTGCCGAGAGGCTCCGCCCTGGTGCCTCTCCAGTaGTCTTTCTGCCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SRELLPRGSALVPLQ*SFCLSHPVAKILQL
Trigger: AAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAGCTCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TTCTGCTGCAGAGCAGGGAGCTCTTGCCGAGAGGCTCCGCCCTGGTaGCTCTCCAGTGCTCTTTCTGCCTGTCCCACCCAGTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: FCCRAGSSCREAPPW*LSSALSACPTQLQR
Trigger: TCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAGCTCCCTGCTCTGCAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GCTGCTCCGATGTCGATGTCTGAGCAGAGTGCCTCCCTGCTCCACTaGAGTCTCTCCCTGCAAAGGCAACAGCACAGCCCTGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: AAPMSMSEQSASLLH*SLSLQRQQHSPAAA
Trigger: TGCAGCAGCAGGGCTGTGCTGTTGCCTTTGCAGGGAGAGACTGCAGTGGAGCAGGGAGGCACTCTGCTCAGACATCGACATCGGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 90 bp GAGCAGGGAGCTCTTGCCAGAGGCTCCGCCCTGGTGCCTCTCCAGTaGTCTTTCTGCCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: EQGALARGSALVPLQ*SFCLSHPVAKILQL
Trigger: AAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTGGCAAGAGCTCCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS GCA 90 bp GTTCTGCTGCAGAGCAGGGAGCTCTTGCCAGAGGCTCCGCCCTGGTaGCTCTCCAGTGCTCTTTCTGCCTGTCCCACCCAGTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: VLLQSRELLPEAPPW*LSSALSACPTQLQR
Trigger: TCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTGGCAAGAGCTCCCTGCTCTGCAGCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CCA 90 bp GCGACTCGGACCACGGCACGTTCTGCAGGGTCCAGCACAGAATCCTaGCTTTTCCGCTTCTTCTGCTCATGCAGTGGCAGGTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: ATRTTARSAGSSTES*LFRFFCSCSGRFQG
Trigger: GCCCTGGAACCTGCCACTGCATGAGCAGAAGAAGCGGAAAAGCCAGGATTCTGTGCTGGACCCTGCAGAACGTGCCGTGGTCCGAGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp AGGCCCTGCAGGAGGAGGCATGCTAGGCTCCTCTGCAGTAGATACTaGAACTGTTGGAGTATCTGGCTCCTCTGCGGTGGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPCRRRHARLLCSRY*NCWSIWLLCGGPCR
Trigger: CCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAACAGTTCCAGTATCTACTGCAGAGGAGCCTAGCATGCCTCCTCCTGCAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 90 bp TGCAAGCTGCTGTTGCAGGACTCCGGGGTCAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCTGGCCTCACAAGTCAACACCCAGGC +
Preference number: 5 (lower is better)
Translates to: CKLLLQDSGVRGNCV*EKLPHAGLTSQHPG
Trigger: GCCTGGGTGTTGACTTGTGAGGCCAGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TGCTGCAGCGTGGACTGCAGCTGTTGCTCCCTCTCCTCTGTCTTCTaGAGCACCGATTCCCAGCACTGGTTCATGGTCTCCAGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: CCSVDCSCCSLSSVF*STDSQHWFMVSRRL
Trigger: AAGCCGCCTGGAGACCATGAACCAGTGCTGGGAATCGGTGCTGCAGAAGACAGAGGAGAGGGAGCAACAGCTGCAGTCCACGCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTGCCCGGTTGGCTTTGGCACCTGTGGAGGCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGGATGTTCGGCTGGAGTGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LPGWLWHLWRLGKSC*WCHQQGMFGWSEKL
Trigger: CAGCTTTTCACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CACTTGAGCTGGAGCGGGTGGGAGAAGCTGCCCGGGAAGATGGTTTaGATCTTCGACCCCGTGACCGGAATGGAGTCATCCCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: HLSWSGWEKLPGKMV*IFDPVTGMESSPEM
Trigger: CATCTCAGGGGATGACTCCATTCCGGTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGCTCCAGCTCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CCCGGTTGGCTTTGGCACCTGTGGAGGCTGGGGAAGAGCTGTTGCTaGTGTCACCAGCAAGGGATGTTCGGCTGGAGTGAAAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PGWLWHLWRLGKSCC*CHQQGMFGWSEKLV
Trigger: CACCAGCTTTTCACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GGGGTGGCTGGAGAAGAAGGCATGGATGTACAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAGCGGGTGGGAGAAGCTGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: GVAGEEGMDVQLWLL*LALELERVGEAARE
Trigger: TTCCCGGGCAGCTTCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTGTACATCCATGCCTTCTTCTCCAGCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTCTTGCCGAGAGGCTCCGCCCTGGTGCCTCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCA +
Preference number: 5 (lower is better)
Translates to: LLPRGSALVPLQCSF*LSHPVAKILQLLMA
Trigger: TGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GCTCTTGCCGAGAGGCTCCGCCCTGGTGCCTCTCCAGTGTCTTTCTaGCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCA +
Preference number: 5 (lower is better)
Translates to: ALAERLRPGASPVSF*LSHPVAKILQLLMA
Trigger: TGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGACACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS GCA 90 bp GCTCCACTGCAGTCTCTCCCTGCAAAGGCAACAGCACAGCCCTGCTaGTGCAGGATGCTGTCCTCGGAAATTCCACCAGTTGGCTCACAG +
Preference number: 5 (lower is better)
Translates to: APLQSLPAKATAQPC*CRMLSSEIPPVGSQ
Trigger: CTGTGAGCCAACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGGGCTGTGCTGTTGCCTTTGCAGGGAGAGACTGCAGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 90 bp GCTCTTGCCAGAGGCTCCGCCCTGGTGCCTCTCCAGTGCTCTTTCTaGCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCA +
Preference number: 5 (lower is better)
Translates to: ALARGSALVPLQCSF*LSHPVAKILQLLMA
Trigger: TGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTGGCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CCA 90 bp ACCTGGAGTCCTGGGGGAGGCAGTGGTGGTCTTCTTAGACATGGTTaGGATTTTGGACGGTTTGGTGAGCCCTCGTCTGGAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: TWSPGGGSGGLLRHG*DFGRFGEPSSGAAL
Trigger: CAGGGCAGCTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGGACTCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CTTCTCTGGGGTAGGTTCTTTGAGAGTTGGGGCAGCAGACTCCTCTaGTGTAGGCCCTGCAGGAGGAGGCATGCTAGGCTCCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LLWGRFFESWGSRLL*CRPCRRRHARLLCS
Trigger: ACTGCAGAGGAGCCTAGCATGCCTCCTCCTGCAGGGCCTACACCAGAGGAGTCTGCTGCCCCAACTCTCAAAGAACCTACCCCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 90 bp TGGCTGGCAGATGGAGACATATCTCCAGGACCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTTCGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: WLADGDISPGPVRMP*AASFSCSCCCLRAS
Trigger: TGAAGCACGAAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTGGAGATATGTCTCCATCTGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AAATCCTTCAAGTCACTTTGGTTCTGCTGCAGAGCAGGGAGCTCTTaGCGAGAGGCTCCGCCCTGGTGCCTCTCCAGTGCTCTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: KSFKSLWFCCRAGSS*REAPPWCLSSALSA
Trigger: GGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CGCTGGCCTCACAAGTCAACACCCAGGCCTGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACTGGCCTAGCAACATGCTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: RWPHKSTPRPAGCQR*SGIADTGLATCSDE
Trigger: CTCATCTGAGCATGTTGCTAGGCCAGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGACTTGTGAGGCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GTACTTGGCTGGCAGATGGAGACATATCTCCAGGACCCGTTAGGATaGCCTGAGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTTCGTG +
Preference number: 5 (lower is better)
Translates to: VLGWQMETYLQDPLG*PELPRSAAHAAAFV
Trigger: CACGAAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CCACTGCAGTCTCTCCCTGCAAAGGCAACAGCACAGCCCTGCTGCTaGAGGATGCTGTCCTCGGAAATTCCACCAGTTGGCTCACAGACT +
Preference number: 5 (lower is better)
Translates to: PLQSLPAKATAQPCC*RMLSSEIPPVGSQT
Trigger: AGTCTGTGAGCCAACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGGGCTGTGCTGTTGCCTTTGCAGGGAGAGACTGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CCA 90 bp CTGGGGAAGAGCTGTTGCTGGTGTCACCAGCAAGGGATGTTCGGCTaGAGTGAAAAGCTGGTGTCGGTCGCTTCAGCTTGCTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: LGKSCCWCHQQGMFG*SEKLVSVASACCLM
Trigger: CATCAGGCAGCAAGCTGAAGCGACCGACACCAGCTTTTCACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCGCCCACCCCTGAGTaGGGAGCTGAGTCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPTPE*GAESPG
Trigger: GCCCGGAGACTCAGCTCCCAACTCAGGGGTGGGCGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS TCA 90 bp CGCATGCCACTTCTGTTCCAAGAGCGCTACACTCTGCTCTGTTTTTaGGCCAGACCCAGAGTCACCACGGCTGAGGAGCATAAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: RMPLLFQERYTLLCF*ARPRVTTAEEHKPA
Trigger: GGCAGGCTTATGCTCCTCAGCCGTGGTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTGTAGCGCTCTTGGAACAGAAGTGGCATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CCAAGCTTCATGGAATTGCTTTGCCCGCTTCCTGGCGTCATCCAGTaGCCGACCCCTTTCAATAGACCGCTGCACAACCTTCTCCCACCG +
Preference number: 5 (lower is better)
Translates to: PSFMELLCPLPGVIQ*PTPFNRPLHNLLPP
Trigger: CGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAGGGGTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TGGTCTTGCAGGAACTTCTGCAGTTCATCTCGTAGAGCCTGCGTCTaGTTCAGCTCTGCCTCTGACCGGGCAAGGGAGGCTGCATATTGC +
Preference number: 5 (lower is better)
Translates to: WSCRNFCSSSRRACV*FSSASDRAREAAYC
Trigger: GCAATATGCAGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGAACTGCAGAAGTTCCTGCAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GAGAGTTTACACACCGTGTCCCAGCGAGTGCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTGTCATCTCTGCTGCCCTCAATCAGT +
Preference number: 5 (lower is better)
Translates to: ESLHTVSQRVLSSWS*PFTHVVSSLLPSIS
Trigger: ACTGATTGAGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCGCTGGGACACGGTGTGTAAACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CACGTCAGGACCTCCTCGAATCGAGCTCTGATGATGGTGATCCAGTaGTTGATGGTCGTGATGCAGTCGGGATGGCAGACAGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: HVRTSSNRALMMVIQ*LMVVMQSGWQTARM
Trigger: CATCCTGGCTGTCTGCCATCCCGACTGCATCACGACCATCAAGCACTGGATCACCATCATCAGAGCTCGATTCGAGGAGGTCCTGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GGAATGACTCTGAATGTCACCCTGCAAATCCTTAACATTTGGTTCTaGGCAGAGCAGGGAGCTCTTGCCGAGAGGCTCCGCCCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: GMTLNVTLQILNIWF*AEQGALAERLRPGA
Trigger: GGCACCAGGGCGGAGCCTCTCGGCAAGAGCTCCCTGCTCTGCGCAGAACCAAATGTTAAGGATTTGCAGGGTGACATTCAGAGTCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS CCA 90 bp GAAACAGAGAGTTTACACACCGTGTCCCAGCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCACGTGGTGTCATCTCTGCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: ETESLHTVSQRVLSS*SCPFTHVVSSLLPS
Trigger: TGAGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCGCTGGGACACGGTGTGTAAACTCTCTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TTGGAGTATCTGGCTCCTCTGCGGTGGGCCCTGCAGGAGTTGGTATaGCAGGTTCCTCTGGGAGGAACATTTCAGCTGCTTGAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LEYLAPLRWALQELV*QVPLGGTFQLLECQ
Trigger: CTGACACTCAAGCAGCTGAAATGTTCCTCCCAGAGGAACCTGCCATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp CATGCTAGGCTCCTCTGCAGTAGATACTGGAACTGTTGGAGTATCTaGCTCCTCTGCGGTGGGCCCTGCAGGAGTTGGTATGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: HARLLCSRYWNCWSI*LLCGGPCRSWYGRF
Trigger: GAACCTGCCATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAACAGTTCCAGTATCTACTGCAGAGGAGCCTAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp AGGAGGAGGCATGCTAGGCTCCTCTGCAGTAGATACTGGAACTGTTaGAGTATCTGGCTCCTCTGCGGTGGGCCCTGCAGGAGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: RRRHARLLCSRYWNC*SIWLLCGGPCRSWY
Trigger: ATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAACAGTTCCAGTATCTACTGCAGAGGAGCCTAGCATGCCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGCCAGGGGCGGAGTaGGGACTCTGCAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQPGAE*GLCSLE
Trigger: TTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGCCCGGTTGGCTTaGGCACCTGTGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSARLA*APVEAG
Trigger: CCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CACTGGTCTCCTCTAGCTGTTGCTTTACAGCTTCAGGTTGGGTGCTaGTGGCTGACTGGCCACTCAGTCGCTGTCCAATGGCCTTCACCT +
Preference number: 5 (lower is better)
Translates to: HWSPLAVALQLQVGC*WLTGHSVAVQWPSP
Trigger: AGGTGAAGGCCATTGGACAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAGCTAGAGGAGACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TTTCTTTTGCAGCCAGATCCTTGTCTGCTCCCTGCGATCTTCCAATaGGTTCCTCTCCCCGCCGCTTCAGGGCTTCAAAGGACGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FLLQPDPCLLPAIFQ*VPLPAASGLQRTAA
Trigger: TGCAGCCGTCCTTTGAAGCCCTGAAGCGGCGGGGAGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GAAGAGCTGTTGCTGGTGTCACCAGCAAGGGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGCTTCAGCTTGCTGCCTGATGACGAA +
Preference number: 5 (lower is better)
Translates to: EELLLVSPARDVRLE*KAGVGRFSLLPDDE
Trigger: TTCGTCATCAGGCAGCAAGCTGAAGCGACCGACACCAGCTTTTCACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAACAGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TGGATCTCTGCTTGGAAGCTCTCCTTTACCTGCACAATCATCCCTTaGTCGCCCACCCCTGAGTTGGGAGCTGAGTCTCCGGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: WISAWKLSFTCTIIP*SPTPELGAESPGRK
Trigger: TTTCCTGCCCGGAGACTCAGCTCCCAACTCAGGGGTGGGCGATCAAGGGATGATTGTGCAGGTAAAGGAGAGCTTCCAAGCAGAGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 90 bp CTCTCGGCCACTTCAAAGGCCTGCTCCAGGTTCTCCCTGTTACTCTaGACTTGTACTCTCTCCATGTCTACCAGATCGGGCCTGTATCGG +
Preference number: 5 (lower is better)
Translates to: LSATSKACSRFSLLL*TCTLSMSTRSGLYR
Trigger: CCGATACAGGCCCGATCTGGTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGCCGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS GCA 90 bp GATGCCCTGAGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCATAAACTGGACCTGCTGCTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DALSCLVQLLMLLPS*FKFLQHKLDLLLLG
Trigger: GCCCAGAAGCAGCAGGTCCAGTTTATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCTCAGGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TTACTGCTGACCGCATGCCACTTCTGTTCCAAGAGCGCTACACTCTaGTCTGTTTTTGAGCCAGACCCAGAGTCACCACGGCTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LLLTACHFCSKSATL*SVFEPDPESPRLRS
Trigger: GCTCCTCAGCCGTGGTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTGTAGCGCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GCATTAGCCACTAGTTCTGACAGAGCAGTTTCCAGGCGCTGTTGGTaGTGCTTTGCCCACGTCAGGACCTCCTCGAATCGAGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: ALATSSDRAVSRRCW*CFAHVRTSSNRALM
Trigger: CATCAGAGCTCGATTCGAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACTGCTCTGTCAGAACTAGTGGCTAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGTCTCTCCCTGCAAAGGCAACAGCACAGCCCTGCTGCTGCAGGATaGTGTCCTCGGAAATTCCACCAGTTGGCTCACAGACTTCTCACA +
Preference number: 5 (lower is better)
Translates to: SLSLQRQQHSPAAAG*CPRKFHQLAHRLLT
Trigger: TGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGGGCTGTGCTGTTGCCTTTGCAGGGAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CCA 90 bp TTCTTTAGGTTGCTCTCCTTTTCTTGCTGCTGGAGCTGGAGCTGTTaGAAGCGCTGGCTCAGCTCTGCCAGTTTGCCCTGCAGCACTGAG +
Preference number: 5 (lower is better)
Translates to: FFRLLSFSCCWSWSC*KRWLSSASLPCSTE
Trigger: CTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAACCTAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CGAATCTCACTGGTCTCCTCTAGCTGTTGCTTTACAGCTTCAGGTTaGGTGCTGATGGCTGACTGGCCACTCAGTCGCTGTCCAATGGCC +
Preference number: 5 (lower is better)
Translates to: RISLVSSSCCFTASG*VLMADWPLSRCPMA
Trigger: GGCCATTGGACAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAGCTAGAGGAGACCAGTGAGATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TCCTCCGCCTCCCTCAGCCACCCAGTTAGTTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGCCGGGCTTGTTCTAAAGTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSASLSHPVSSSYVE*NLVASCRACSKVLR
Trigger: CCTCAGAACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATATGAGGAACTAACTGGGTGGCTGAGGGAGGCGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TGTCTATGTTCTGAGGGATGGGCTCCTGATCCCGCTGGATTAGGGTaGTCTCAGCCCACTGGATCCATGCCAGAAGTTCTTCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: CLCSEGWAPDPAGLG*SQPTGSMPEVLPGA
Trigger: AGCTCCTGGAAGAACTTCTGGCATGGATCCAGTGGGCTGAGACCACCCTAATCCAGCGGGATCAGGAGCCCATCCCTCAGAACATAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CCTCTCCTGGCATCGGTGTTACAGCATCCAGGGCATTTTCTACCATaGGTACTACAGCAGCTGGGACAGGCCTCTGTTGGCTGGATATCC +
Preference number: 5 (lower is better)
Translates to: PLLASVLQHPGHFLP*VLQQLGQASVGWIS
Trigger: GGATATCCAGCCAACAGAGGCCTGTCCCAGCTGCTGTAGTACCCATGGTAGAAAATGCCCTGGATGCTGTAACACCGATGCCAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp TCGAGAGAACTGAAGTGGAGTCTTGGTCCCGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGTACAGCTGTGGTTACTCTGACTAGC +
Preference number: 5 (lower is better)
Translates to: SRELKWSLGPAGWGG*RRRHGCTAVVTLTS
Trigger: GCTAGTCAGAGTAACCACAGCTGTACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAGACTCCACTTCAGTTCTCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGGAGCTGGAGCTGTaGGAAGCGCTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLELEL*EALAQL
Trigger: GAGCTGAGCCAGCGCTTCCAACAGCTCCAGCTCCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CCAGGCGGGACAGACTGGTGCTGCGGTCGCAGGTATATTTTCGTTTaGTGGAGTCTTGGAGGTTTCTCAGAAATGACTCCAGGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: PGGTDWCCGRRYIFV*WSLGGFSEMTPGLG
Trigger: CCCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGCGACCGCAGCACCAGTCTGTCCCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCCACTGAAGCGCTTCTCCTTCCTCTGCAGCTGTGGCGGCATCATTaGGCGCTTTCAGTTTCCTATAGAAGTCCTCTACTCGGCCCAACG +
Preference number: 5 (lower is better)
Translates to: STEALLLPLQLWRHH*ALSVSYRSPLLGPT
Trigger: CGTTGGGCCGAGTAGAGGACTTCTATAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGCTGCAGAGGAAGGAGAAGCGCTTCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp AGAAGAAGGCATGGATGTACAGCTGTGGTTACTCTGACTAGCACTTaGGCTGGAGCGGGTGGGAGAAGCTGCCCGGGAAGATGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: RRRHGCTAVVTLTST*AGAGGRSCPGRWFG
Trigger: TCCAAACCATCTTCCCGGGCAGCTTCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTGTACATCCATGCCTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CTACTATGCCACCAGCAAATAGCTGGGCTTCCAGCAGCCGGACAGTaGCTTGCCTGTCTATCAGCCCTTCCTGAACAGCACGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: LLCHQQIAGLPAAGQ*LACLSALPEQHGKC
Trigger: GCATTTTCCGTGCTGTTCAGGAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTGGCATAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp GCTTCCAAAACCTTCAATGCAGAAGCAAAGTCTACTTTCCCGAGCTaGATTGCTTCCGGCGGCGTGAGCACGTTGTTGCCCGCCTCGTCT +
Preference number: 5 (lower is better)
Translates to: ASKTFNAEAKSTFPS*IASGGVSTLLPASS
Trigger: AGACGAGGCGGGCAACAACGTGCTCACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGACTTTGCTTCTGCATTGAAGGTTTTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp GTGCTCCTGCATTTCATCTGTGTTACCACTTGCTGCTGCAGCTTCTaGGCCCAGAGGCTGGAATTCATGGGGAGAGCTCTCACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VLLHFICVTTCCCSF*AQRLEFMGRALTVL
Trigger: CAGCACAGTGAGAGCTCTCCCCATGAATTCCAGCCTCTGGGCTCAGAAGCTGCAGCAGCAAGTGGTAACACAGATGAAATGCAGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 90 bp GAATTTCACTGTATCGGGCCTGCAATGAGTCTAGCTTTTCTGACATaGTGCCCTGCTCTGCCGGACATGTCAGGGAGGAGAGGGACTGCC +
Preference number: 5 (lower is better)
Translates to: EFHCIGPAMSLAFLT*CPALPDMSGRRGTA
Trigger: GGCAGTCCCTCTCCTCCCTGACATGTCCGGCAGAGCAGGGCATCATGTCAGAAAAGCTAGACTCATTGCAGGCCCGATACAGTGAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS GCA 90 bp CGCCCTGGTGCCTCTCCAGTGCTCTTTCTGCCTGTCCCACCCAGTTaGAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RPGASPVLFLPVPPS*KDPPASYGRCLVVS
Trigger: AGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTGAGCCACCCGTGTCCGTTCCTGGAGAACCTCATATTGCTCCTTTaGCTGATGAAGTTTTTCTCGAAGAGCTGTCAGCTCCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LSHPCPFLENLILLL*LMKFFSKSCQLLGA
Trigger: AGCCCCCAGGAGCTGACAGCTCTTCGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAGGAACGGACACGGGTGGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGAGCCGTACGTCCTCAATTTGTGACTGGAGGCTATCCGTGTCTCTaGCAATGGCTCCCATGCCATCTAGCTCATCATCCAGGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RAVRPQFVTGGYPCL*QWLPCHLAHHPGQP
Trigger: TGGCTGACCTGGATGATGAGCTAGATGGCATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACGTACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGCTTGTCCTGGATTTCTTTTGCAGCCAGATCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCCTCTCCCCGCCGCTTCAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SLSWISFAARSLSAP*DLPMSSSPRRFRAS
Trigger: TGAAGCCCTGAAGCGGCGGGGAGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CGCTTCCTGGCGTCATCCAGTGACCGACCCCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGAGACTGCACACTAACCAACAAATTC +
Preference number: 5 (lower is better)
Translates to: RFLASSSDRPLSIDR*TTFSHRDCTLTNKF
Trigger: GAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAGGGGTCGGTCACTGGATGACGCCAGGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp ACCAGGTCCTCAGCTCATCAAACATTTGCTGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTCTGTTCATGCGGTCGGCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: TRSSAHQTFAGIAGC*QELPEVCSCGRLQG
Trigger: ACCTTGCAGCCGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCTGAGGACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GCATCCATGAGGTTCATGACGAGGTCAAGGTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGCTCCACCTTGTACAACCAGTCAACT +
Preference number: 5 (lower is better)
Translates to: ASMRFMTRSRSPCTG*SSANCGSTLYNQST
Trigger: AGTTGACTGGTTGTACAAGGTGGAGCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGACCTTGACCTCGTCATGAACCTCATGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTCAGCTCTGCCAGTTaGCCCTGCAGCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLSSAS*PCSTEA
Trigger: AGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTGTTGGTGCTGCTTaGCCCACGTCAGGACCTCCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAVGAA*PTSGPP
Trigger: AGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCCGGGAAGATGGTTaGGATCTTCGACCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAREDG*DLRPRD
Trigger: GTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTGGGGAAGAGCTGTaGCTGGTGTCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAGEEL*LVSPAR
Trigger: CCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLGSAR*ALAPVE
Trigger: CTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GAACTGCTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCCACCCAATCCAAGAGAGCATCGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: ELLHSWKASLWLSLR*PHRSHPIQESIDLP
Trigger: AGGAAGATCGATGCTCTCTTGGATTGGGTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GCTAGTTGCTGGTTGATGACATCCACTTCAGTTCCCACAATCCACTaGAGCGCTTCTCCTTCCTCTGCAGCTGTGGCGGCATCATTGAGC +
Preference number: 5 (lower is better)
Translates to: ASCWLMTSTSVPTIH*SASPSSAAVAASLS
Trigger: GCTCAATGATGCCGCCACAGCTGCAGAGGAAGGAGAAGCGCTTCAGTGGATTGTGGGAACTGAAGTGGATGTCATCAACCAGCAACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CTATCAGCCAGCTCAGCTGACTGGGCTATTCTGCCTCCTTCTGCTTaGAGCATATCCACTGTGGCCTTTCGATCATCTAGGAGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: LSASSADWAILPPSA*SISTVAFRSSRSRW
Trigger: CCAGCGACTCCTAGATGATCGAAAGGCCACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCTGGCTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GCTTCCAGCAGCCGGACAGTGACTTGCCTGTCTATCAGCCCTTCCTaGACAGCACGGAAAATGCTAACTTTCCGACCTGACTTCAAGCTC +
Preference number: 5 (lower is better)
Translates to: ASSSRTVTCLSISPS*TARKMLTFRPDFKL
Trigger: GAGCTTGAAGTCAGGTCGGAAAGTTAGCATTTTCCGTGCTGTTCAGGAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCTGCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp GAACTGCTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCACCCAATCCAAGAGAGCATCGATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ELLHSWKASLWLSLR*PHRSTQSKRASIFL
Trigger: GAGGAAGATCGATGCTCTCTTGGATTGGGTGCTTCTGTGGGGTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS TCA 90 bp GCCTCCCTTGGAGGAACTTTTCATGGCCCTGGGCCAGGTTGCACTTaGGAATCTGTGCTCCTGCATTTCATCTGTGTTACCACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASLGGTFHGPGPGCT*ESVLLHFICVTTCC
Trigger: GCAGCAAGTGGTAACACAGATGAAATGCAGGAGCACAGATTCTCAAGTGCAACCTGGCCCAGGGCCATGAAAAGTTCCTCCAAGGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 90 bp GCTTCAACAGGGCACTGGAGCCCTGAAGTCAGACCCTCTAGCCCCTaGTCAGGTCTGTTTTTCACCTCACTGATAACAGTGTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: ASTGHWSPEVRPSSP*SGLFFTSLITVSPA
Trigger: TGCAGGTGACACTGTTATCAGTGAGGTGAAAAACAGACCTGATCAGGGGCTAGAGGGTCTGACTTCAGGGCTCCAGTGCCCTGTTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 90 bp AACAGGGCCTGCTCGAGCAGGGATGCTTTCCGACAGCACCGGTCTTaGATTTCACTGTATCGGGCCTGCAATGAGTCTAGCTTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NRACSSRDAFRQHRS*ISLYRACNESSFSD
Trigger: GTCAGAAAAGCTAGACTCATTGCAGGCCCGATACAGTGAAATTCAAGACCGGTGCTGTCGGAAAGCATCCCTGCTCGAGCAGGCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS GCA 90 bp CCTAGTTCTTCCACACTGGTATGGATATGCTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGGTCATTACCCCACTCTGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: PSSSTLVWICCCVSN*SSTLGRSLPHSARS
Trigger: GGAGCGAGCAGAGTGGGGTAATGACCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GCCTTGCTGAGGAGATCAGTCCATCTACGTTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTATCAGCCAGCTCAGCTGACTGGGCT +
Preference number: 5 (lower is better)
Translates to: ALLRRSVHLRSRLSS*PVIFSLSASSADWA
Trigger: AGCCCAGTCAGCTGAGCTGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGAACGTAGATGGACTGATCTCCTCAGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TTGATCCAGCTTGTCCTGGATTTCTTTTGCAGCCAGATCCTTGTCTaGTCCCTGCGATCTTCCAATGAGTTCCTCTCCCCGCCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: LIQLVLDFFCSQILV*SLRSSNEFLSPPLQ
Trigger: CTGAAGCGGCGGGGAGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACAAGCTGGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CCTTTACCCACGTGGTGTCATCTCTGCTGCCCTCAATCAGTTCTCTaGCTGATCGTTTCAGGACCTGAACTGTGCCGGTTCTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PLPTWCHLCCPQSVL*LIVSGPELCRFSFP
Trigger: TGGGAAAGAGAACCGGCACAGTTCAGGTCCTGAAACGATCAGGCAGAGAACTGATTGAGGGCAGCAGAGATGACACCACGTGGGTAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTGTATCGGGCCTGCAATGAGTCTAGCTTTTCTGACATGATGCCCTaGTCTGCCGGACATGTCAGGGAGGAGAGGGACTGCCCAATTTTA +
Preference number: 5 (lower is better)
Translates to: LYRACNESSFSDMMP*SAGHVREERDCPIL
Trigger: TAAAATTGGGCAGTCCCTCTCCTCCCTGACATGTCCGGCAGAGCAGGGCATCATGTCAGAAAAGCTAGACTCATTGCAGGCCCGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000125447.3
ENSMUST00000151346.8
CDS CCA 90 bp AGTCTGTGTCCTGTTCTTGGATCTACTATGCCACCAGCAAATAGCTaGGCTTCCAGCAGCCGGACAGTGACTTGCCTGTCTATCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLCPVLGSTMPPANS*ASSSRTVTCLSISP
Trigger: AGGGCTGATAGACAGGCAAGTCACTGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTGGCATAGTAGATCCAAGAACAGGACACAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp ACAGCCCTGCTGCTGCAGGATGCTGTCCTCGGAAATTCCACCAGTTaGCTCACAGACTTCTCACAGTTCCTTTCTGCTGGGTTATCAAGC +
Preference number: 5 (lower is better)
Translates to: TALLLQDAVLGNSTS*LTDFSQFLSAGLSS
Trigger: GCTTGATAACCCAGCAGAAAGGAACTGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFIMRRR*PGDFCC
Trigger: ACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTTGCAAGCTGCTGTaGCAGGACTCCGGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCCKLL*QDSGVR
Trigger: TCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCAGGCCAGGTGGCTaGCAGATTCCTCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSRPGG*QIPLAA
Trigger: AGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCCTGGCTGCTGCCTaGCTGAGGAGATCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCLAAA*LRRSVH
Trigger: ATGGACTGATCTCCTCAGCAAGGCAGCAGCCAGGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYVEWN*VASCRA
Trigger: AGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGCCGGACAGTGACTaGCCTGTCTATCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQPDSD*PVYQPF
Trigger: GAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp ATGTCCTGCCTGGCATCTCTGTCAGTCTTGGAGCTGGCTGGAGACTaGATTTGTTTGAGCAGTCTCTGCTCACACTCCTCCAGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: MSCLASLSVLELAGD*ICLSSLCSHSSRSS
Trigger: ACTACTCCTGGAGGAGTGTGAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATGCCAGGCAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CTGAGAACCTTTCTCCTGATAGCGCTCCAAATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTGTTCTGCCACTTTCTTGGCCTTAGT +
Preference number: 5 (lower is better)
Translates to: LRTFLLIALQIQVWL*CWVPELFCHFLGLS
Trigger: ACTAAGGCCAAGAAAGTGGCAGAACAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGATTTGGAGCGCTATCAGGAGAAAGGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCATCAAACATTTGCTGGAATTGCTGGGTGCTGGCAAGAGCTGCCTaGAGTCTGTTCATGCGGTCGGCTGCAAGGTCTTCTAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SSNICWNCWVLARAA*SLFMRSAARSSKPW
Trigger: CCAAGGCTTAGAAGACCTTGCAGCCGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GAGGGCTTGGATTTTGTTAAGGAAGAGCCGTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTCTCTGCCAATGGCTCCCATGCCATC +
Preference number: 5 (lower is better)
Translates to: EGLDFVKEEPYVLNL*LEAIRVSANGSHAI
Trigger: GATGGCATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CAGCAATGGATTCCCTTAGTTGCCTCATCTCTTCCTGCTGCTGTCTaGGCTGCTCATGATCCACAGCTGGAGGAGGCAGCTGTGCTATTA +
Preference number: 5 (lower is better)
Translates to: QQWIPLVASSLPAAV*AAHDPQLEEAAVLL
Trigger: TAATAGCACAGCTGCCTCCTCCAGCTGTGGATCATGAGCAGCTCAGACAGCAGCAGGAAGAGATGAGGCAACTAAGGGAATCCATTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp AAACAGCAGCTTCTCTCCATGGCTGGATCCTTCCTCTCTTGGGCCTaGCACAGGTGGTTTACCAGCAGCAAAGCCTACCTTGCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: KQQLLSMAGSFLSWA*HRWFTSSKAYLALF
Trigger: GAACAAAGCAAGGTAGGCTTTGCTGCTGGTAAACCACCTGTGTCAGGCCCAAGAGAGGAAGGATCCAGCCATGGAGAGAAGCTGCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp GAACTGCTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCCAATCCAAGAGAGCATCGATCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ELLHSWKASLWLSLR*PHRSQSKRASIFLL
Trigger: CAAGAGGAAGATCGATGCTCTCTTGGATTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS GCA 90 bp GTCTTCCATTGCCAAAGTGAGCTCCTGGATCTGCTGGGAAAAATGTaGAATATCTTGATCTGGCTGGTTCCCAGAGGCCAGCAGTCGGCT +
Preference number: 5 (lower is better)
Translates to: VFHCQSELLDLLGKM*NILIWLVPRGQQSA
Trigger: AGCCGACTGCTGGCCTCTGGGAACCAGCCAGATCAAGATATTGCACATTTTTCCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GATAGGTCCAGGGCAAAGCCACAGGAGCCCAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTCTCCTTCTGGTCTTCCATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: DRSRAKPQEPSVVTR*SRVSRFSFWSSIAK
Trigger: TTTGGCAATGGAAGACCAGAAGGAGAACCTAGATACTCTGGAGCACCTGGTTACTACACTGGGCTCCTGTGGCTTTGCCCTGGACCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CACCCAGTTAGTTCCTCATATGTAGAGTGGAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTTCTGAGGGCCTTGGAGCTAGTGAGA +
Preference number: 5 (lower is better)
Translates to: HPVSSSYVEWNLVAS*RACSKVLRALELVR
Trigger: TCTCACTAGCTCCAAGGCCCTCAGAACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATATGAGGAACTAACTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTCCGTGTCATCAGGAAGGGCTCCTCGAAAGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAACAGCATATGGACCGTGTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: LRVIRKGSSKAKCLF*FRKPLQQHMDRVPK
Trigger: TTTCGGGACACGGTCCATATGCTGTTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGAGGAGCCCTTCCTGATGACACGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GATGCCCTGAGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCATAAACTGCTGCTTCTGGGCATTCAA +
Preference number: 5 (lower is better)
Translates to: DALSCLVQLLMLLPS*FKFLQHKLLLLGIQ
Trigger: TTGAATGCCCAGAAGCAGCAGTTTATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCTCAGGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS CCA 90 bp ATCGTATGCTGCCTGATCCAGGGAATGAGTGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAGTCCACTTCCGTAGCACTGATCCCT +
Preference number: 5 (lower is better)
Translates to: IVCCLIQGMSESTRL*YSCHLESTSVALIP
Trigger: AGGGATCAGTGCTACGGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTCACTCATTCCCTGGATCAGGCAGCATACGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS CCA 90 bp CAATGTGATGTCCTGCCTGGCATCTCTGTCAGTCTTGGAGCTGGCTaGAGACTGAATTTGTTTGAGCAGTCTCTGCTCACACTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QCDVLPGISVSLGAG*RLNLFEQSLLTLLQ
Trigger: CTGGAGGAGTGTGAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATGCCAGGCAGGACATCACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AGTTTTTCTCGAAGAGCTGTCAGCTCCTGGGGGCTCAGCTTGGTCTaGTTCTCTTCCAGGAACCCTTCAATGTCTTTGACAGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SFSRRAVSSWGLSLV*FSSRNPSMSLTAVA
Trigger: TGCCACTGCTGTCAAAGACATTGAAGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCTTCGAGAAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GTACGTCCTCAATTTGTGACTGGAGGCTATCCGTGTCTCTGCCAATaGCTCCCATGCCATCTAGCTCATCATCCAGGTCAGCCAATTGAG +
Preference number: 5 (lower is better)
Translates to: VRPQFVTGGYPCLCQ*LPCHLAHHPGQPIE
Trigger: CTCAATTGGCTGACCTGGATGATGAGCTAGATGGCATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GAGGCATTCGCAGGCGAGAGGACAGGTTCTCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAAACTGAGCAGACTGGGACACAGCCT +
Preference number: 5 (lower is better)
Translates to: EAFAGERTGSPGSPT*VQFYHETEQTGTQP
Trigger: AGGCTGTGTCCCAGTCTGCTCAGTTTCATGATAAAATTGAACCCATGTTGGAGACCCTGGAGAACCTGTCCTCTCGCCTGCGAATGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AACTGGCCCAGGGCCAAGAGAGCACCTTCTAGCTTATGCTGTCTATaGGCAATCTTCTCACCCAGATTCTCCCAGAGGTGCTTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: NWPRAKRAPSSLCCL*AIFSPRFSQRCLSS
Trigger: AGAACTCAAGCACCTCTGGGAGAATCTGGGTGAGAAGATTGCCCATAGACAGCATAAGCTAGAAGGTGCTCTCTTGGCCCTGGGCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGCTGCTTCATCCATaGCAACTGGGACTGGACAGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQLLHP*QLGLDS
Trigger: GCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTCTGAGCGCAGAGTaGTGGCACTTGAACCTGATG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFALSAE*WHLNLM
Trigger: CATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLSQLA*ELLELV
Trigger: AACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGCCAGGGGCGGAGTaGGGACTCTGCAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQPGAE*GLCSLE
Trigger: TTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAACGGGAGTTGAGCTaGTCAGTGAGCTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFERELS*SVSSTH
Trigger: GTGGGTTGAGCTCACTGACAAGCTCAACTCCCGTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGCTGGAACGGGAGTaGAGCTTGTCAGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWLERE*SLSVSS
Trigger: TGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAAACTGGGGTATTaGCTCCCCTGTGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLKLGY*LPCGRL
Trigger: CAGTCTCCCACAGGGGAGCAAATACCCCAGTTTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAAGCTTCATGGAATaGCTTTGCCCGCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPSFME*LCPLPG
Trigger: GCCAGGAAGCGGGCAAAGCAATTCCATGAAGCTTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGTCCACGTCAGGTaGTTTGCGTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPVHVR*FACHLL
Trigger: GAGGAGATGACACGCAAACAACCTGACGTGGACAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTGCCCGGTTGGCTTaGGCACCTGTGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSARLA*APVEAG
Trigger: CCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCCATGAAGGGGCCTaGTTCATCTCCAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGHEGA*FISKDL
Trigger: GAGATCCTTGGAGATGAACAAGGCCCCTTCATGGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGAGCAGGGAGCTCTaGCCAGAGGCTCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQSREL*PEAPPW
Trigger: CCAGGGCGGAGCCTCTGGCAAGAGCTCCCTGCTCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS TCA 90 bp GACTGTGTTGGTCCAGGAAGGACTGAACTGACTGGGTGGCCACAATaGAATTCTGCTGCTGAGACAGCAATTCTTGGTGACGAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: DCVGPGRTELTGWPQ*NSAAETAILGDEPS
Trigger: TGAAGGCTCGTCACCAAGAATTGCTGTCTCAGCAGCAGAATTTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCAACACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ACTGTAATACAGAGCTCGCCTCCTTTTGAACCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTTCCTGTCGTTCTCGCAGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: TVIQSSPPFEPPPFC*RQSEGFPVVLAALP
Trigger: GGGAAGTGCTGCGAGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCTGTATTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TGGCTGGAACGGGAGTTGAGCTTGTCAGTGAGCTCAACCCACTTCTaGCTGATGCTTTGCAGATCTTTGTGTACTTGGCTGGCAGATGGA +
Preference number: 5 (lower is better)
Translates to: WLERELSLSVSSTHF*LMLCRSLCTWLADG
Trigger: TCCATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CACCATTCCCCCTGCCAACTGCTTGACAGGCAACAATTTCAACCCTaGCTCTTGATGGATGATACATCTCTGCATCAGGTCCAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: HHSPCQLLDRQQFQP*LLMDDTSLHQVQQA
Trigger: GGCTTGCTGGACCTGATGCAGAGATGTATCATCCATCAAGAGTCAGGGTTGAAATTGTTGCCTGTCAAGCAGTTGGCAGGGGGAATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TATCAGCCCTTCCTGAACAGCACGGAAAATGCTAACTTTCCGACCTaGCTTCAAGCTCACCATTCCCCCTGCCAACTGCTTGACAGGCAA +
Preference number: 5 (lower is better)
Translates to: YQPFLNSTENANFPT*LQAHHSPCQLLDRQ
Trigger: TTGCCTGTCAAGCAGTTGGCAGGGGGAATGGTGAGCTTGAAGTCAGGTCGGAAAGTTAGCATTTTCCGTGCTGTTCAGGAAGGGCTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp CCTCCAGCTTCTTATGGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTaGCCTGAACTTCTTGCTGGACTTGCTGAAGATGGCCCTGCACCA +
Preference number: 5 (lower is better)
Translates to: PPASYGRCLVVSAES*PELLAGLAEDGPAP
Trigger: TGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TCCCAGGCCCCTCCAACAACTGATGACTCATTCTCCAACAAAAGGTaGGCAGTCTGGATCTCTGCTTGGAAGCTCTCCTTTACCTGCACA +
Preference number: 5 (lower is better)
Translates to: SQAPPTTDDSFSNKR*AVWISAWKLSFTCT
Trigger: TGTGCAGGTAAAGGAGAGCTTCCAAGCAGAGATCCAGACTGCTCACCTTTTGTTGGAGAATGAGTCATCAGTTGTTGGAGGGGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS TCA 90 bp ATTGAGTCTCAGTTCTCCAGCCAGCAGGTGCAGACTAAGAACCTCTaGCTCAGAAGACCTCCTCTGGAAGTCTGTAGGAAACTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: IESQFSSQQVQTKNL*LRRPPLEVCRKLCW
Trigger: CCAGCACAGTTTCCTACAGACTTCCAGAGGAGGTCTTCTGAGTCAGAGGTTCTTAGTCTGCACCTGCTGGCTGGAGAACTGAGACTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 90 bp GTAGCTGGAGTGGCAGACCATTCTGGGATGGAACTACTAACCACTTaGGTATCAGGCTTCTCTGGGGTAGGTTCTTTGAGAGTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: VAGVADHSGMELLTT*VSGFSGVGSLRVGA
Trigger: TGCCCCAACTCTCAAAGAACCTACCCCAGAGAAGCCTGATACTCAAGTGGTTAGTAGTTCCATCCCAGAATGGTCTGCCACTCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 90 bp TTCCGTCTGCTGAGCCAACTCGCTTTGGAGCTGCTGGAGTTGGTTTaGAGAACCATCACAAAGGTCATGGTAAGTCTTGTTCAGCACACG +
Preference number: 5 (lower is better)
Translates to: FRLLSQLALELLELV*RTITKVMVSLVQHT
Trigger: CGTGTGCTGAACAAGACTTACCATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CAGCAGGCTCTCCATACTTTCCTGAACACTCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGACCGCTCATCCAAGCTACAAGAGAG +
Preference number: 5 (lower is better)
Translates to: QQALHTFLNTLRLSN*LLQQSRPLIQATRE
Trigger: CTCTCTTGTAGCTTGGATGAGCGGTCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGAGTGTTCAGGAAAGTATGGAGAGCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AATTGTCCCAAATCAGACCGAATCTCACTGGTCTCCTCTAGCTGTTaGTTTACAGCTTCAGGTTGGGTGCTGATGGCTGACTGGCCACTC +
Preference number: 5 (lower is better)
Translates to: NCPKSDRISLVSSSC*FTASGWVLMADWPL
Trigger: GAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAGCTAGAGGAGACCAGTGAGATTCGGTCTGATTTGGGACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TCCCGAAACTCTTCTGCCTGTTTTAAGGCTTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTACACACCGTGTCCCAGCGAGTGCTA +
Preference number: 5 (lower is better)
Translates to: SRNSSACFKACSSRL*LETESLHTVSQRVL
Trigger: TAGCACTCGCTGGGACACGGTGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAGAAGAGTTTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTCTTGGGCCTGACACAGGTGGTTTACCAGCAGCAAAGCCTACCTTaGTTTGTTCTGCAGAGTCTGCTAGTTGTATGTGGGGCATCATGT +
Preference number: 5 (lower is better)
Translates to: LLGLTQVVYQQQSLP*FVLQSLLVVCGASC
Trigger: ACATGATGCCCCACATACAACTAGCAGACTCTGCAGAACAAAGCAAGGTAGGCTTTGCTGCTGGTAAACCACCTGTGTCAGGCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp CAAAACCTTCAATGCAGAAGCAAAGTCTACTTTCCCGAGCTGAATTaGTTCCGGCGGCGTGAGCACGTTGTTGCCCGCCTCGTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: QNLQCRSKVYFPELN*FRRREHVVARLVFN
Trigger: ATTAAAGACGAGGCGGGCAACAACGTGCTCACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGACTTTGCTTCTGCATTGAAGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp CATCAGTGGCAGCTAAGGTTTGTTTCCAAGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: HQWQLRFVSKQAPEN*SIPGRLACGFLSDD
Trigger: GTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTGCTTGGAAACAAACCTTAGCTGCCACTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS GCA 90 bp GAGGAACTTTTCATGGCCCTGGGCCAGGTTGCACTTGAGAATCTGTaGTCCTGCATTTCATCTGTGTTACCACTTGCTGCTGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: EELFMALGQVALENL*SCISSVLPLAAAAS
Trigger: AGAAGCTGCAGCAGCAAGTGGTAACACAGATGAAATGCAGGAGCACAGATTCTCAAGTGCAACCTGGCCCAGGGCCATGAAAAGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp GGTCCATCTTCTCTACCATCAGGTTCAGCTCTGAGCGCAGAGTTGTaGCACTTGAACCTGATGGAGACTGCTGGAGAAAGACGTTGCATT +
Preference number: 5 (lower is better)
Translates to: GPSSLPSGSALSAEL*HLNLMETAGERRCI
Trigger: AATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGCTGAACCTGATGGTAGAGAAGATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TCTAGCTGTTGCTTTACAGCTTCAGGTTGGGTGCTGATGGCTGACTaGCCACTCAGTCGCTGTCCAATGGCCTTCACCTTTTCTGATAAG +
Preference number: 5 (lower is better)
Translates to: SSCCFTASGWVLMAD*PLSRCPMAFTFSDK
Trigger: CTTATCAGAAAAGGTGAAGGCCATTGGACAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TGCAACCTCAGCTTGATGTACAAGTGGGGAAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCCCTGAGTGAAGTTCCTCAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: CNLSLMYKWGSIRSI*SIFYESLSEVPQVV
Trigger: GACTACCTGAGGAACTTCACTCAGGGACTCGTAGAAGATGCTCCAGATGGATCGGATGCTTCCCCACTTGTACATCAAGCTGAGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GCTTGGATTTTGTTAAGGAAGAGCCGTACGTCCTCAATTTGTGACTaGAGGCTATCCGTGTCTCTGCCAATGGCTCCCATGCCATCTAGC +
Preference number: 5 (lower is better)
Translates to: AWILLRKSRTSSICD*RLSVSLPMAPMPSS
Trigger: GCTAGATGGCATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TCAAGCAGCCCAGCTGCCACAGCCTCCTTTACAGAGCACAGAGAGTaGGTCCTGGGGTCTAAGATACCACTTATAGCTTTGTCTGACATA +
Preference number: 5 (lower is better)
Translates to: SSSPAATASFTEHRE*VLGSKIPLIALSDI
Trigger: TATGTCAGACAAAGCTATAAGTGGTATCTTAGACCCCAGGACCCACTCTCTGTGCTCTGTAAAGGAGGCTGTGGCAGCTGGGCTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp CAGAGATCTCCAAAGACAGGGTACCATCCTCTTCTGAGAAGGGTGTaGAGGTCTTTTCAGGTTCTGTATCTTCAGGCCGGATCCCATGCA +
Preference number: 5 (lower is better)
Translates to: QRSPKTGYHPLLRRV*RSFQVLYLQAGSHA
Trigger: TGCATGGGATCCGGCCTGAAGATACAGAACCTGAAAAGACCTCCACACCCTTCTCAGAAGAGGATGGTACCCTGTCTTTGGAGATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CCA 90 bp TCATCTGTGTTACCACTTGCTGCTGCAGCTTCTGAGCCCAGAGGCTaGAATTCATGGGGAGAGCTCTCACTGTGCTGTTGGAATTTGAAG +
Preference number: 5 (lower is better)
Translates to: SSVLPLAAAASEPRG*NSWGELSLCCWNLK
Trigger: CTTCAAATTCCAACAGCACAGTGAGAGCTCTCCCCATGAATTCCAGCCTCTGGGCTCAGAAGCTGCAGCAGCAAGTGGTAACACAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTCTCTGGGCAGTTaGATGCCTGAGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSLGS*MPERTS
Trigger: AGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTAGGGTGGTAGCCTaGAGGCAGCTTAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVRVVA*RQLNSA
Trigger: GGCAGAATTAAGCTGCCTCAAGGCTACCACCCTAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCAGAGTTGTGGCACTaGAACCTGATGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAELWH*NLMETA
Trigger: AGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGGGAGGCTGCATATaGCTCCTTAAGCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKGGCI*LLKLTQ
Trigger: CTGGGTGAGCTTAAGGAGCAATATGCAGCCTCCCTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGGAGCTGGAGCTGTaGGAAGCGCTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLELEL*EALAQL
Trigger: GAGCTGAGCCAGCGCTTCCAACAGCTCCAGCTCCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCAGCAGTCGGCTTTaGTTTTCCATGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFASSRL*FSMNCC
Trigger: GCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGCCAGGGGCGGAGTaGGGACTCTGCAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQPGAE*GLCSLE
Trigger: TTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAATCCCCTCTAGCTaGTTTTCCATGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPIPSS*FSMVRQ
Trigger: CTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFAARS*SAPCDL
Trigger: AAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACTCTGCTCTGTTTTaGAGCCAGACCCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHSALF*SQTQSH
Trigger: GTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMVIQC*MVVMQS
Trigger: CGACTGCATCACGACCATCAAGCACTGGATCACCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGCCCGGTTGGCTTaGGCACCTGTGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSARLA*APVEAG
Trigger: CCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACAAGGCCTGTGTCTaGGTCAATGAGGCCCTTTTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHKACV*VNEALL
Trigger: CAAAAGGGCCTCATTGACCAAGACACAGGCCTTGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGAGGGAAGCATCTTaGGATGTCATCTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVREAS*DVIWEG
Trigger: CCCTTCCCAGATGACATCCAAAGATGCTTCCCTCAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACACCAGGTGGGCGTaGAACTCATGTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHTRWA*NSCSSW
Trigger: CCAAGATGAACATGAGTTCAACGCCCACCTGGTGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238731.2
CDS TCA 90 bp ATCTGGAGATCCACCTGCAGCTGCCTGATGAGACCCTCACACTCTTaGATGTACATAATGACATCTGACTCACACTGCACTGGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: IWRSTCSCLMRPSHS*MYIMTSDSHCTGCP
Trigger: AGGACAGCCAGTGCAGTGTGAGTCAGATGTCATTATGTACATTCAAGAGTGTGAGGGTCTCATCAGGCAGCTGCAGGTGGATCTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CATTTCAATGGCCTCCTTATTCGGTGGGGGAATGAGAAAGCAAACTaGTGGAACCATTGCCTCGTTCCCTGTAGGGCTGATCACCTTCCA +
Preference number: 5 (lower is better)
Translates to: HFNGLLIRWGNEKAN*WNHCLVPCRADHLP
Trigger: TGGAAGGTGATCAGCCCTACAGGGAACGAGGCAATGGTTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCCATTGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TGGCATCTCTGTCAGTCTTGGAGCTGGCTGGAGACTGAATTTGTTTaGGCAGTCTCTGCTCACACTCCTCCAGGAGTAGTCGGATATTCT +
Preference number: 5 (lower is better)
Translates to: WHLCQSWSWLETEFV*AVSAHTPPGVVGYS
Trigger: AGAATATCCGACTACTCCTGGAGGAGTGTGAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GGCTCAGCTTGGTCTGGTTCTCTTCCAGGAACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGGTGGAATGACTCTGAATGTCACCCT +
Preference number: 5 (lower is better)
Translates to: GSAWSGSLPGTLQCL*QQWQMRWNDSECHP
Trigger: AGGGTGACATTCAGAGTCATTCCACCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CTCAGGTGTGAGATTGTGACTGTGTTGGTCCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAAATTCTGCTGCTGAGACAGCAATTC +
Preference number: 5 (lower is better)
Translates to: LRCEIVTVLVQEGLN*LGGHNEILLLRQQF
Trigger: GAATTGCTGTCTCAGCAGCAGAATTTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCAACACAGTCACAATCTCACACCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ACGCTTCTTCAGCTCATCCTTGAGGTACTGCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGTCTGAGCCTCCTTAATCTCATTGTC +
Preference number: 5 (lower is better)
Translates to: TLLQLILEVLLTNEQ*EFLAQRLSLLNLIV
Trigger: GACAATGAGATTAAGGAGGCTCAGACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAAGCGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GCATCTGAAGAGGAAATCATGCGGCGGCGCTTGCCTGGAGATTTCTaGTGTGACTCCACGAAGGCTTTATATGTCATAAGCTGCAACTCA +
Preference number: 5 (lower is better)
Translates to: ASEEEIMRRRLPGDF*CDSTKALYVISCNS
Trigger: TGAGTTGCAGCTTATGACATATAAAGCCTTCGTGGAGTCACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TCAGTGGCAGCTAAGGTTTGTTTTTCCAAGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: SVAAKVCFSKQAPEN*SIPGRLACGFLSDD
Trigger: GTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTGCTTGGAAAAACAAACCTTAGCTGCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp ACTGCCCAATCCCCTCTAGCTTGTTTTCCATGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTTCTAAGAACTCCTGCTGTGCAACCT +
Preference number: 5 (lower is better)
Translates to: TAQSPLACFPWSGSY*SLFASLLRTPAVQP
Trigger: AGGTTGCACAGCAGGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGCATATGGACCGTGTCCCGAAACTCTTCTGCCTGTTTTAAGGCTTaGTCAAGCCGGCTTTGCTTGGAAACAGAGAGTTTACACACCGTG +
Preference number: 5 (lower is better)
Translates to: SIWTVSRNSSACFKA*SSRLCLETESLHTV
Trigger: CACGGTGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAGAAGAGTTTCGGGACACGGTCCATATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGGTATCTTCCCATCCACCTTCACTACAGAACATGGCAGCGACAGTaGCATTTCCTCCCTGATTTCAGAAATGGCCGGAATGACAGCATC +
Preference number: 5 (lower is better)
Translates to: RYLPIHLHYRTWQRQ*HFLPDFRNGRNDSI
Trigger: GATGCTGTCATTCCGGCCATTTCTGAAATCAGGGAGGAAATGGCACTGTCGCTGCCATGTTCTGTAGTGAAGGTGGATGGGAAGATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp CATCAGTGGCAGCTAAGGTTTGTTTTTCAGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: HQWQLRFVFQQAPEN*SIPGRLACGFLSDD
Trigger: GTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTGCTGAAAAACAAACCTTAGCTGCCACTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS GCA 90 bp GTTTCTGCTCCAGCTTTATTGAGTCTCAGTTCTCCAGCCAGCAGGTaGAGACTAAGAACCTCTGACTCAGAAGACCTCCTCTGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: VSAPALLSLSSPASR*RLRTSDSEDLLWKS
Trigger: AGACTTCCAGAGGAGGTCTTCTGAGTCAGAGGTTCTTAGTCTGCACCTGCTGGCTGGAGAACTGAGACTCAATAAAGCTGGAGCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 90 bp TTCCAGGAAGGGTCCATCAGGAGAGAAAATTTCCTTAGCAGGCACTaGAGTAGCTGGAGTGGCAGACCATTCTGGGATGGAACTACTAAC +
Preference number: 5 (lower is better)
Translates to: FQEGSIRRENFLSRH*SSWSGRPFWDGTTN
Trigger: GTTAGTAGTTCCATCCCAGAATGGTCTGCCACTCCAGCTACTGCAGTGCCTGCTAAGGAAATTTTCTCTCCTGATGGACCCTTCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp AACCTAGCCTCTTTGACACTTGAGCCTAGTTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCCAACTGCAGCTCCACACTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: NLASLTLEPSSSTLV*ICCCVSNCSSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TGTTCAACACACAAGCACAGCTGCTTCATCCATTGCAACTGGGACTaGACAGCAGCACTATATGCCTCTACTGTTTGCTTAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: CSTHKHSCFIHCNWD*TAALYASTVCLAGW
Trigger: CCACCCAGCTAAGCAAACAGTAGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AGACTGGTGCTGCGGTCGCAGGTATATTTTCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGACTCCAGGTCTCGGGCATCACTGAAG +
Preference number: 5 (lower is better)
Translates to: RLVLRSQVYFRLMES*RFLRNDSRSRASLK
Trigger: CTTCAGTGATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGCGACCGCAGCACCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CTTTCTGCCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATaGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTTTGTTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSACPTQLQRSSSFL*QVSCCFCRVFCSVC
Trigger: GCAGACGGAACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GCTGAGTTGCTGTCAGCTGTCTCCATGAATCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTCTTTTGTCTAGCAATGTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: AELLSAVSMNRVTMS*VASKLLFCLAMSCF
Trigger: GAAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAAGCCACCCATGACATGGTCACTCGATTCATGGAGACAGCTGACAGCAACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CCCAGTGTAGTAACCAGGTGCTCCAGAGTATCTAGGTTCTCCTTCTaGTCTTCCATTGCCAAAGTGAGCTCCTGGATCTGCTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: PSVVTRCSRVSRFSF*SSIAKVSSWICWEK
Trigger: TTTTTCCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAGACCAGAAGGAGAACCTAGATACTCTGGAGCACCTGGTTACTACACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GGACTCGACAGTGGAACTGCCCAATCCCCTCTAGCTTGTTTTCCATaGTCAGGCAGCTACTGCTCACTCTTTGCTTCACTTCTAAGAACT +
Preference number: 5 (lower is better)
Translates to: GLDSGTAQSPLACFP*SGSYCSLFASLLRT
Trigger: AGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TCTTCAGTGTGTGTTAGCCAGCTCATTAGTTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAGAGAGCACCTTCTAGCTTATGCTGT +
Preference number: 5 (lower is better)
Translates to: SSVCVSQLISSSKAC*NWPRAKRAPSSLCC
Trigger: ACAGCATAAGCTAGAAGGTGCTCTCTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGAACTAATGAGCTGGCTAACACACACTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TCTGAGATTAGAGTTCAGCAATCCCCCTGTGTCCAGCTCGCTATGTaGCTCCAGATCAGCCAGAAGCTTAAATTCTCCACCAATCTTGGG +
Preference number: 5 (lower is better)
Translates to: SEIRVQQSPCVQLAM*LQISQKLKFSTNLG
Trigger: CCCAAGATTGGTGGAGAATTTAAGCTTCTGGCTGATCTGGAGCCACATAGCGAGCTGGACACAGGGGGATTGCTGAACTCTAATCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp GGGTCCATCAGGAGAGAAAATTTCCTTAGCAGGCACTGCAGTAGCTaGAGTGGCAGACCATTCTGGGATGGAACTACTAACCACTTGAGT +
Preference number: 5 (lower is better)
Translates to: GSIRRENFLSRHCSS*SGRPFWDGTTNHLS
Trigger: ACTCAAGTGGTTAGTAGTTCCATCCCAGAATGGTCTGCCACTCCAGCTACTGCAGTGCCTGCTAAGGAAATTTTCTCTCCTGATGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp TTCAGCTTGCTGCCTGATGACGAAATAACCTCAGGGCTGAGGAGCTaGAGGTCAGGACAATGGCTGTCCTTGACAGCTTTACTGTTTATC +
Preference number: 5 (lower is better)
Translates to: FSLLPDDEITSGLRS*RSGQWLSLTALLFI
Trigger: GATAAACAGTAAAGCTGTCAAGGACAGCCATTGTCCTGACCTCCAGCTCCTCAGCCCTGAGGTTATTTCGTCATCAGGCAGCAAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGTGAATGTTTTCTTTaGCACTCGGTCCCGCTCATC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGECFL*HSVPLI
Trigger: GATGAGCGGGACCGAGTGCAAAAGAAAACATTCACC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCGGCTTTGGTATTCTaGCCATCTGGAGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSALVF*PSGVHF
Trigger: GAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCTGGAGACTGAATTaGTTTGAGCAGTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGWRLN*FEQSLL
Trigger: GAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAAGVG*QNHHKG
Trigger: ACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLELLE*VCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFILQVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGAGACTGAGCAATaGCCTTCTGCAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSETEQ*PSAAKQ
Trigger: CTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTCAGCTCTGCCAGTTaGCCCTGCAGCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSSAS*PCSTEA
Trigger: AGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGGAGCTGGAGCTGTaGGAAGCGCTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLELEL*EALAQL
Trigger: GAGCTGAGCCAGCGCTTCCAACAGCTCCAGCTCCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGGAGCTGGAGCTGTaGGAAGCGCTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLELEL*EALAQL
Trigger: GAGCTGAGCCAGCGCTTCCAACAGCTCCAGCTCCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAACCTGTTTTGGCTaGGGAATCAGGAGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGTCFG*GIRSCD
Trigger: ATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGCCAGGGGCGGAGTaGGGACTCTGCAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQPGAE*GLCSLE
Trigger: TTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGCCAGGGGCGGAGTaGGGACTCTGCAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQPGAE*GLCSLE
Trigger: TTCCAGGCTGCAGAGTCCCAACTCCGCCCCTGGCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLRAWI*LRKSRT
Trigger: CGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGAGCCTCCTGCAGTaGTGCAATTCTTTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQSLLQ*CNSLCN
Trigger: GTTGCACAAAGAATTGCACAACTGCAGGAGGCTCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAAGTTCTGAGGGCCTaGGAGCTAGTGAGAGTGATG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKVLRA*ELVRVM
Trigger: CATCACTCTCACTAGCTCCAAGGCCCTCAGAACTTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTGTTCTAGACGAATaGGACCGAGAGCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLVLDE*DREPSA
Trigger: AGCTGATGGCTCTCGGTCCAATTCGTCTAGAACAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTCAGACCGTGCTTaGATGTCCTCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSDRA*MSSQKN
Trigger: GTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCAGCTTCAACCTGTaGCTTGATGATGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSFNL*LDDGWV
Trigger: GACCCATCCATCATCAAGCAACAGGTTGAAGCTGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGMVQS*ITVLSS
Trigger: GCTAGATAACACTGTGATCAAGCTCTGCACCATGCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSQRC*SSVSGS
Trigger: AGAACCACTGACAGAACTCAAGCACCTCTGGGAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGGCTTCTTCCAACTaGTGCTGTCGCTCTACAGAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKASSN*CCRSTD
Trigger: GTCTGTAGAGCGACAGCACAAGTTGGAAGAAGCCTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCACGTCAGGTTGTTaGCGTGTCATCTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSTSGC*RVISSI
Trigger: TATGGAGGAGATGACACGCAAACAACCTGACGTGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCCGGGAAGATGGTTaGGATCTTCGACCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAREDG*DLRPRD
Trigger: GTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGCCCGGTTGGCTTaGGCACCTGTGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSARLA*APVEAG
Trigger: CCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLGSAR*ALAPVE
Trigger: CTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCTGTGTCCTGTTCTaGGATCTACTATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVCVLF*DLLCHQ
Trigger: CTGGTGGCATAGTAGATCCAAGAACAGGACACAGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCAGCAAAGCCTACCTaGCTTTGTTCTGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAAKPT*LCSAES
Trigger: AGACTCTGCAGAACAAAGCAAGGTAGGCTTTGCTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTGTGGCTGTCTCCTaGTCAAGCAGCCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLVAVS*SSSPAA
Trigger: GGCAGCTGGGCTGCTTGACAAGGAGACAGCCACAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTCATTTGGACACTTaGCTCTCCACCCATCTCTCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAHLDT*LSTHLS
Trigger: AGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCAGCCATGTCTCCTTaGGAAATGTGGGGTACATCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAAMSP*EMWGTS
Trigger: AGATGTACCCCACATTTCCAAAGGAGACATGGCTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGATCCTCGCTGTTaGCATGACGCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPDPRC*HDARRA
Trigger: TGCCCTCCTGGCGTCATGCAAACAGCGAGGATCAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCTCTCAATTTCAGCAAAGAGTTCCGTCTGCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTCTGCCTGGCCAGGCTTCATCATTTC +
Preference number: 5 (lower is better)
Translates to: SLNFSKEFRLLTKLL*QHSTILCLARLHHF
Trigger: GAAATGATGAAGCCTGGCCAGGCAGAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAGCAGACGGAACTCTTTGCTGAAATTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TTGGCCAAGGCTTCTTGGATGACTCCTGATGAGAGTGATGCCACCTaGTCCCTTTCTAGGTTTTGTTCAACTTCCCTTATGGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: LAKASWMTPDESDAT*SLSRFCSTSLMDCS
Trigger: GCTGCAGTCCATAAGGGAAGTTGAACAAAACCTAGAAAGGGATCAGGTGGCATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CGCTCTTCAGACCGTGCTTTGATGTCCTCCCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATTTCTTTTGCAGCCAGATCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RSSDRALMSSQKNTI*SSLSWISFAARSLS
Trigger: AGACAAGGATCTGGCTGCAAAAGAAATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CCCCCTGCCAACTGCTTGACAGGCAACAATTTCAACCCTGACTCTTaGTGGATGATACATCTCTGCATCAGGTCCAGCAAGCCAACTTTT +
Preference number: 5 (lower is better)
Translates to: PPANCLTGNNFNPDS*WMIHLCIRSSKPTF
Trigger: AAAAGTTGGCTTGCTGGACCTGATGCAGAGATGTATCATCCATCAAGAGTCAGGGTTGAAATTGTTGCCTGTCAAGCAGTTGGCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TTGCTCTCCACCCATCTCTCTCCTCACTCTTCTATCAACCCTTACTaGCCGCTCACTCAACAGGTTGCCTGCTGTTTCATAATGAGATCC +
Preference number: 5 (lower is better)
Translates to: LLSTHLSPHSSINPY*PLTQQVACCFIMRS
Trigger: GGATCTCATTATGAAACAGCAGGCAACCTGTTGAGTGAGCGGTCAGTAAGGGTTGATAGAAGAGTGAGGAGAGAGATGGGTGGAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp GATGGCAAAATGCTCACAGTGATGCCACTGACAGATAAATCACTCTaGGAAGCAGGCATTATGGGACCCTTGCAGGACACGAGACCTACA +
Preference number: 5 (lower is better)
Translates to: DGKMLTVMPLTDKSL*EAGIMGPLQDTRPT
Trigger: TGTAGGTCTCGTGTCCTGCAAGGGTCCCATAATGCCTGCTTCTCAGAGTGATTTATCTGTCAGTGGCATCACTGTGAGCATTTTGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 90 bp TCTTTGACACTTGAGCCTAGTTCTTCCACACTGGTATGGATATGCTaGTGTGTTTCCAACTGCAGCTCCACACTAGGCAGGTCATTACCC +
Preference number: 5 (lower is better)
Translates to: SLTLEPSSSTLVWIC*CVSNCSSTLGRSLP
Trigger: GGGTAATGACCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGGCTCAAGTGTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp GCCTCTTTGACACTTGAGCCTAGTTCTTCCACACTGGTATGGATATaGTGCTGTGTTTCCAACTGCAGCTCCACACTAGGCAGGTCATTA +
Preference number: 5 (lower is better)
Translates to: ASLTLEPSSSTLVWI*CCVSNCSSTLGRSL
Trigger: TAATGACCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGGCTCAAGTGTCAAAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TGTTGTAGCCAGTTTTCAAATTCCTTGTGGTCTTGCAGGAACTTCTaGAGTTCATCTCGTAGAGCCTGCGTCTGCTTCAGCTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: CCSQFSNSLWSCRNF*SSSRRACVCFSSAS
Trigger: AGAGGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTGGCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CGGAAATTCCACCAGTTGGCTCACAGACTTCTCACAGTTCCTTTCTaGTGGGTTATCAAGCAGGTGAGCAATGACTGTCATACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RKFHQLAHRLLTVPF*WVIKQVSNDCHTLF
Trigger: GAAGAGGGTATGACAGTCATTGCTCACCTGCTTGATAACCCAGCAGAAAGGAACTGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 90 bp TTGGCCGACGTCTGGGTGGCACGGGTGCTGACTTCTGCACATCACTaGTTAGCTTTAATGCATCAAATATTATCCTCTCATCCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LADVWVARVLTSAHH*LALMHQILSSHPAS
Trigger: AGAAGCTGGATGAGAGGATAATATTTGATGCATTAAAGCTAAGCAGTGATGTGCAGAAGTCAGCACCCGTGCCACCCAGACGTCGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 90 bp CGTTCTGCATTTGGCCGACGTCTGGGTGGCACGGGTGCTGACTTCTaGACATCACTGCTTAGCTTTAATGCATCAAATATTATCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RSAFGRRLGGTGADF*TSLLSFNASNIILS
Trigger: TGAGAGGATAATATTTGATGCATTAAAGCTAAGCAGTGATGTGCAGAAGTCAGCACCCGTGCCACCCAGACGTCGGCCAAATGCAGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp GACTGGACAGCAGCACTATATGCCTCTACTGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACCTCCGCTGTATCTTGTAGAGAACGA +
Preference number: 5 (lower is better)
Translates to: DWTAALYASTVCLAG*FSSDNTSAVSCRER
Trigger: TCGTTCTCTACAAGATACAGCGGAGGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAACAGTAGAGGCATATAGTGCTGCTGTCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GAGCTCGTTTTGGCCTGTAGCTCCTCAGTTATGGCATCCATGTTCTaGTTGAGCCCAGCCTTCTCATCTCGGATCTCATCTTCATCTATT +
Preference number: 5 (lower is better)
Translates to: ELVLACSSSVMASMF*LSPAFSSRISSSSI
Trigger: AATAGATGAAGATGAGATCCGAGATGAGAAGGCTGGGCTCAACCAGAACATGGATGCCATAACTGAGGAGCTACAGGCCAAAACGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AAGGACTTTCTGCTACCACTGCGGGATTTCTCCATGAAAGGTGCATaGGTGGGTTCTACACTCTTCCTCTTATATGTCTTGGTGACCCTG +
Preference number: 5 (lower is better)
Translates to: KDFLLPLRDFSMKGA*VGSTLFLLYVLVTL
Trigger: CAGGGTCACCAAGACATATAAGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCATGGAGAAATCCCGCAGTGGTAGCAGAAAGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TGGTCCAACTCTTCCTCAGAAAGAACTGCTGCTTCCCTGCTCATTTaGACACTTTGCTCTCCACCCATCTCTCTCCTCACTCTTCTATCA +
Preference number: 5 (lower is better)
Translates to: WSNSSSERTAASLLI*TLCSPPISLLTLLS
Trigger: TGATAGAAGAGTGAGGAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAGTTGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp ACAAAGTCTCCGAGTAAACACATTCTGAGTTGCTCTGCAAGGCTCTaGGTTTACACCTTCAATCCCCTTCCCACTGGGTATGGCCATGAA +
Preference number: 5 (lower is better)
Translates to: TKSPSKHILSCSARL*VYTFNPLPTGYGHE
Trigger: TTCATGGCCATACCCAGTGGGAAGGGGATTGAAGGTGTAAACCCAGAGCCTTGCAGAGCAACTCAGAATGTGTTTACTCGGAGACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp GATGACGAAATAACCTCAGGGCTGAGGAGCTGGAGGTCAGGACAATaGCTGTCCTTGACAGCTTTACTGTTTATCAACCAGGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: DDEITSGLRSWRSGQ*LSLTALLFINQGLS
Trigger: TGACAAACCCTGGTTGATAAACAGTAAAGCTGTCAAGGACAGCCATTGTCCTGACCTCCAGCTCCTCAGCCCTGAGGTTATTTCGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCGTTAGCTTGGGATaGCCATCTGTGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSVSLG*PSVMSS
Trigger: TGATGACATCACAGATGGCAATCCCAAGCTAACGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGCAGGAAGAAAAGTaGGTGCATTTGACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQQEEK*VHLTPV
Trigger: CACAGGAGTCAAATGCACCAACTTTTCTTCCTGCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGTTACTCTGCACTaGTACTCTCTCCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPVTLH*YSLHVY
Trigger: GTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCACCATTCTGTATCTaGTTTGCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAPFCI*FAICSS
Trigger: GCTGCTGCAGATTGCAAACAAGATACAGAATGGTGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCCTTCCAGTTCCATaGTCAACTCAGAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLPVP*STQRSR
Trigger: CCTACTTCTCTGAGTTGACAATGGAACTGGAAGGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTTTCCTCAATCCACTaGATGAGAGTTCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVSSIH*MRVPWQ
Trigger: CTGCCATGGAACTCTCATCAAGTGGATTGAGGAAAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIMRRR*PGDFCC
Trigger: ACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGGAGAACCTCATATaGCTCCTTTGCCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLENLI*LLCLMK
Trigger: CTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTAACTGCTTTGTTGTaGCAAGCTGCTGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVTALL*QAAVAG
Trigger: TCCTGCAACAGCAGCTTGCAACAACAAAGCAGTTAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTGTAACTGCTTTGTaGTTGCAAGCTGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPVTAL*LQAAVA
Trigger: TGCAACAGCAGCTTGCAACAACAAAGCAGTTACAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTTCAGTTTCATGTaGTTGGCCAAGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCFSFM*LAKASW
Trigger: CCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTCAGCTCTGCCAGTTaGCCCTGCAGCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSSAS*PCSTEA
Trigger: AGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTATGGAACCTGTTTaGGCTTGGGAATCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSMEPV*AWESGA
Trigger: AGCTCCTGATTCCCAAGCCAAAACAGGTTCCATACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCAGGCCAGGTGGCTaGCAGATTCCTCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSRPGG*QIPLAA
Trigger: AGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWAFNM*GSIDKG
Trigger: TCCCTTGTCTATTGACCCCAACATGTTGAATGCCCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCCTGGAGCAGGTCTaGGTATTGGGTACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVLEQV*VLGTFN
Trigger: GTTAAAAGTACCCAATACCAAGACCTGCTCCAGGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFFSSS*RYCSPM
Trigger: CATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGCAACTTCTGTTCTaGGATCTGTGCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEQLLF*DLCFHH
Trigger: GTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCCTGGCTGCTGCCTaGCTGAGGAGATCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCLAAA*LRRSVH
Trigger: ATGGACTGATCTCCTCAGCAAGGCAGCAGCCAGGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYVEWN*VASCRA
Trigger: AGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVSLIS*YCSLAS
Trigger: TGATGCCAACGAGCAGTACAAACTGATCAGTGACAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMHSLI*STSAGI
Trigger: GATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTACGGTGGCACTTTTATaGTCACTGATGCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFTVALL*SLMHSL
Trigger: CAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTCCTGGATTTCTTTaGCAGCCAGATCCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCPGFL*QPDPCL
Trigger: CAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGACAGTATCCCATTaGTCTCTGACTTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQTVSH*SLTSPS
Trigger: GCTAGGAGAAGTCAGAGACAAATGGGATACTGTCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSRLC*ETESLH
Trigger: GTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTGTTGGTGCTGCTTaGCCCACGTCAGGACCTCCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAVGAA*PTSGPP
Trigger: AGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTTTCCAGGCGCTGTaGGTGCTGCTTTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSFQAL*VLLCPR
Trigger: ACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFLLYV*VTLSTS
Trigger: TGACGTGGACAGGGTCACCAAGACATATAAGAGGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCACTTGGAATCTTTTaGCACACTTGCACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPLGIF*HTCTEP
Trigger: TGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCCGGGAAGATGGTTaGGATCTTCGACCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAREDG*DLRPRD
Trigger: GTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCCGGGAAGATGGTTaGGATCTTCGACCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAREDG*DLRPRD
Trigger: GTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTGGGGAAGAGCTGTaGCTGGTGTCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAGEEL*LVSPAR
Trigger: CCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTGGGGAAGAGCTGTaGCTGGTGTCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAGEEL*LVSPAR
Trigger: CCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLGSAR*ALAPVE
Trigger: CTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLGSAR*ALAPVE
Trigger: CTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGILDG*VSPRLE
Trigger: CTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGCCGGACAGTGACTaGCCTGTCTATCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQPDSD*PVYQPF
Trigger: GAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAACACTCTGTCCTTCTaGGCTTTGTTTGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNTLSF*ALFVAI
Trigger: GATGGCCACAAACAAAGCCAAGAAGGACAGAGTGTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTGTGGCTGTCTCCTaGTCAAGCAGCCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLVAVS*SSSPAA
Trigger: GGCAGCTGGGCTGCTTGACAAGGAGACAGCCACAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMAGVL*FLQSLD
Trigger: GTCAAGACTCTGCAGAAACAACAAGACACCTGCCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCACTCCGGGCTCCTTaGGGAGCCTCGCTGTTAACT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPLRAP*GASLLT
Trigger: AGTTAACAGCGAGGCTCCCAAAGGAGCCCGGAGTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACCTCAGCCAGCCAGTaGAGCACCTCCACCTCATCC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTSASQ*STSTSS
Trigger: GGATGAGGTGGAGGTGCTCAACTGGCTGGCTGAGGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGCTGGCTCCAGTTaGATGCCTGAGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPAGSS*MPERTS
Trigger: AGAGGTCCTCTCAGGCATCAAACTGGAGCCAGCAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCGTTTTGGCCTGTAGCTCCTCAGTTATGGCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTCGGATCTCATCTTCATCTATTTCTG +
Preference number: 5 (lower is better)
Translates to: SFWPVAPQLWHPCSG*AQPSHLGSHLHLFL
Trigger: CAGAAATAGATGAAGATGAGATCCGAGATGAGAAGGCTGGGCTCAACCAGAACATGGATGCCATAACTGAGGAGCTACAGGCCAAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ACTCTTTGCTTCACTTCTAAGAACTCCTGCTGTGCAACCTCAGCTTaGTGTACAAGTGGGGAAGCATCCGATCCATCTGGAGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: TLCFTSKNSCCATSA*CTSGEASDPSGASS
Trigger: AGAAGATGCTCCAGATGGATCGGATGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACAGCAGGAGTTCTTAGAAGTGAAGCAAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CAATACCAGGGCTTTCTAAGTCATGAACAATATCCTGGGTGTCTTTaGTGGTGGTCAGGAGAGCTGCCATGTCATACCAGAACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: QYQGFLSHEQYPGCL*WWSGELPCHTRTSP
Trigger: CGGAGAAGTTCTGGTATGACATGGCAGCTCTCCTGACCACCATCAAAGACACCCAGGATATTGTTCATGACTTAGAAAGCCCTGGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TGTTGCTTGATGATGGATGGGTCAATACCAGGGCTTTCTAAGTCATaGACAATATCCTGGGTGTCTTTGATGGTGGTCAGGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: CCLMMDGSIPGLSKS*TISWVSLMVVRRAA
Trigger: GGCAGCTCTCCTGACCACCATCAAAGACACCCAGGATATTGTTCATGACTTAGAAAGCCCTGGTATTGACCCATCCATCATCAAGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CCAAAGCTGATGCCAATGTCACTCTTTTTCCTGTGGCCATGTCTATaGTTCCACCAGTGTTCGCCTGAGCTTCCAAAACCTTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: PKLMPMSLFFLWPCL*FHQCSPELPKPSMQ
Trigger: CTGCATTGAAGGTTTTGGAAGCTCAGGCGAACACTGGTGGAATCATAGACATGGCCACAGGAAAAAGAGTGACATTGGCATCAGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp CTTTCAGCCATAGATTGTTTCATATCCTTGTATGGTTGGAGAGTGTaGCTCAGGCTGTCAGCGTCAGTTTCAGTGTCACAGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSAIDCFISLYGWRV*LRLSASVSVSQPLL
Trigger: CAGCAAGGGCTGTGACACTGAAACTGACGCTGACAGCCTGAGTCACACTCTCCAACCATACAAGGATATGAAACAATCTATGGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TCAGTCTCTTCAATGACTCCAGTGCCTTCCAAAGCTTCCTCCCTGTaGGATGCTTCTGGAGTAAGGATTTTCTTCCCTCTCCACTTCCTT +
Preference number: 5 (lower is better)
Translates to: SVSSMTPVPSKASSL*DASGVRIFFPLHFL
Trigger: AAGGAAGTGGAGAGGGAAGAAAATCCTTACTCCAGAAGCATCTCACAGGGAGGAAGCTTTGGAAGGCACTGGAGTCATTGAAGAGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 90 bp TTCAGCTCTGAGCGCAGAGTTGTGGCACTTGAACCTGATGGAGACTaGTGGAGAAAGACGTTGCATTTCATAGAAATAGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: FSSERRVVALEPDGD*WRKTLHFIEIASRS
Trigger: TGACCTGGATGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGCTTCCTTGCCGCTTTAGCAAGGAGTTCAGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTATCCAGCTCATTCTCAGATTGTTGTA +
Preference number: 5 (lower is better)
Translates to: SFLAALARSSELQDC*LPYAYYPAHSQIVV
Trigger: TACAACAATCTGAGAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTCTGAACTCCTTGCTAAAGCGGCAAGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGAAGCTTCCTTGCCGCTTTAGCAAGGAGTTCAGAGCTTCAGGACTaGTGCCTCCCTTATGCATACTATCCAGCTCATTCTCAGATTGTT +
Preference number: 5 (lower is better)
Translates to: RSFLAALARSSELQD*CLPYAYYPAHSQIV
Trigger: AACAATCTGAGAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTCTGAACTCCTTGCTAAAGCGGCAAGGAAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TCTTCAAGCTTTGACTTTCTCTCTTCCACCTTACTGCTGACCGCATaGCACTTCTGTTCCAAGAGCGCTACACTCTGCTCTGTTTTTGAG +
Preference number: 5 (lower is better)
Translates to: SSSFDFLSSTLLLTA*HFCSKSATLCSVFE
Trigger: CTCAAAAACAGAGCAGAGTGTAGCGCTCTTGGAACAGAAGTGGCATGCGGTCAGCAGTAAGGTGGAAGAGAGAAAGTCAAAGCTTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CGACCCCTTTCAATAGACCGCTGCACAACCTTCTCCCACCGAGACTaGACACTAACCAACAAATTCTTGATCAAGACAACATCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RPLSIDRCTTFSHRD*TLTNKFLIKTTSCF
Trigger: GAAACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAGGGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TCTTCCTCAGAAAGAACTGCTGCTTCCCTGCTCATTTGGACACTTTaGTCTCCACCCATCTCTCTCCTCACTCTTCTATCAACCCTTACT +
Preference number: 5 (lower is better)
Translates to: SSSERTAASLLIWTL*SPPISLLTLLSTLT
Trigger: AGTAAGGGTTGATAGAAGAGTGAGGAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp ACCAATTGTAACTTCCTGGTCCAACTCTTCCTCAGAAAGAACTGCTaGTTCCCTGCTCATTTGGACACTTTGCTCTCCACCCATCTCTCT +
Preference number: 5 (lower is better)
Translates to: TNCNFLVQLFLRKNC*FPAHLDTLLSTHLS
Trigger: AGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAGTTGGACCAGGAAGTTACAATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp GAGGGATCCTTTCCATATACTCCTCTACATTCCCCTCAGTCTGACTaGAGTCTACCTGGGACAAATTGCCATTTTCTTTGGCTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: EGSFPYTPLHSPQSD*SLPGTNCHFLWLAQ
Trigger: CTGAGCTAGCCAAAGAAAATGGCAATTTGTCCCAGGTAGACTGCAGTCAGACTGAGGGGAATGTAGAGGAGTATATGGAAAGGATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp GTAGTGGTTAAAGTAGAGGGCGGAACCAATTCAAGTGACGAGAAATaGCCTTTCCGGTATAGATTTGTACACTCTAAGCGCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: VVVKVEGGTNSSDEK*PFRYRFVHSKRRVT
Trigger: GGTCACCCTGCGCTTAGAGTGTACAAATCTATACCGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCGCCCTCTACTTTAACCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TGCTCTTCAGCACATGGTCTGGATTGCGTGGCTTTAGCTGAACAATaGTTTTTGATCTCCCAACAAGACTGGCAACGGAACTCTTGGACT +
Preference number: 5 (lower is better)
Translates to: CSSAHGLDCVALAEQ*FLISQQDWQRNSWT
Trigger: AGTCCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGCTGAAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AGCTCTGAGCGCAGAGTTGTGGCACTTGAACCTGATGGAGACTGCTaGAGAAAGACGTTGCATTTCATAGAAATAGCATCCAGGTCAGAT +
Preference number: 5 (lower is better)
Translates to: SSERRVVALEPDGDC*RKTLHFIEIASRSD
Trigger: ATCTGACCTGGATGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GTGATGCCACCTGATCCCTTTCTAGGTTTTGTTCAACTTCCCTTATaGACTGCAGCAGGCTCTCCATACTTTCCTGAACACTCTGAGACT +
Preference number: 5 (lower is better)
Translates to: VMPPDPFLGFVQLPL*TAAGSPYFPEHSET
Trigger: AGTCTCAGAGTGTTCAGGAAAGTATGGAGAGCCTGCTGCAGTCCATAAGGGAAGTTGAACAAAACCTAGAAAGGGATCAGGTGGCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AAGCGAAGTGTTTGTTCTGCTTCAGAAAGCCACTCCAACAGCATATaGACCGTGTCCCGAAACTCTTCTGCCTGTTTTAAGGCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: KRSVCSASESHSNSI*TVSRNSSACFKACS
Trigger: TGAGCAAGCCTTAAAACAGGCAGAAGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGCTGCTTCATCCATaGCAACTGGGACTGGACAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQLLHP*QLGLDS
Trigger: GCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGGAGATAAGGCTTTaGGTGTTAATGTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQEIRL*VLMCSW
Trigger: CCAGCTACACATTAACACCAAAAGCCTTATCTCCTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAKVSS*SSFSSD
Trigger: ATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGTTCTGCCACTTTCTaGGCCTTAGTGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCSATF*ALVISS
Trigger: TGAGGAAATCACTAAGGCCAAGAAAGTGGCAGAACA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIMRRR*PGDFCC
Trigger: ACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMAGVL*FLQSLL
Trigger: CAAAAGACTCTGCAGAAACAACAAGACACCTGCCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAATTCCTTGTGGTCTaGCAGGAACTTCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKFLVV*QELLQF
Trigger: GAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTTGCAAGCTGCTGTaGCAGGACTCCGGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCCKLL*QDSGVR
Trigger: TCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTTGCAAGCTGCTGTaGCAGGACTCCGGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCCKLL*QDSGVR
Trigger: TCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTCAGCTCTGCCAGTTaGCCCTGCAGCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSSAS*PCSTEA
Trigger: AGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTCAGCTCTGCCAGTTaGCCCTGCAGCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSSAS*PCSTEA
Trigger: AGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTTCCCATCGGGAATaGAGGTCCTCTTGCATTTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFSHRE*RSSCIF
Trigger: GAAAATGCAAGAGGACCTCAATTCCCGATGGGAAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCAGGCCAGGTGGCTaGCAGATTCCTCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSRPGG*QIPLAA
Trigger: AGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGCTTTGCAGATCTTaGTGTACTTGGCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMLCRS*CTWLAD
Trigger: ATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAACGGGAGTTGAGCTaGTCAGTGAGCTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGERELS*SVSSTH
Trigger: GTGGGTTGAGCTCACTGACAAGCTCAACTCCCGTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGCTGGAACGGGAGTaGAGCTTGTCAGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWLERE*SLSVSS
Trigger: TGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGAGCCGTTCCAATTTaGCAGAAATTGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGAVPI*QKLGSF
Trigger: AAAACTGCCCAATTTCTGCAAAATTGGAACGGCTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCTGCATACAGTCCTaGAGCCTAGACTGTCGATTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFCIQS*SLDCRF
Trigger: AAATCGACAGTCTAGGCTCAAGGACTGTATGCAGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGCCTGGCTGCTGCCTaGCTGAGGAGATCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCLAAA*LRRSVH
Trigger: ATGGACTGATCTCCTCAGCAAGGCAGCAGCCAGGCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCCTGGCTGCTGCCTaGCTGAGGAGATCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCLAAA*LRRSVH
Trigger: ATGGACTGATCTCCTCAGCAAGGCAGCAGCCAGGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYVEWN*VASCRA
Trigger: AGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGAAACTGGGGTATTaGCTCCCCTGTGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLKLGY*LPCGRL
Trigger: CAGTCTCCCACAGGGGAGCAAATACCCCAGTTTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGTTCCTTCTGTCTTaGCTGAAACTGGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQFLLS*LKLGYL
Trigger: CAAATACCCCAGTTTCAGCAAAGACAGAAGGAACTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFASTCC*MMDGSI
Trigger: TATTGACCCATCCATCATCAAGCAACAGGTTGAAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAACTGGTTCCCTGTTaGATCCAGTTCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQLVPC*IQFNDL
Trigger: CAGATCATTGAACTGGATCAAACAGGGAACCAGTTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAACTGTGGCTCCACCTaGTACAACCAGTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNCGST*YNQSTK
Trigger: TTTAGTTGACTGGTTGTACAAGGTGGAGCCACAGTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGTTGGTGCTGCTTaGCCCACGTCAGGACCTCCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAVGAA*PTSGPP
Trigger: AGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTGTTGGTGCTGCTTaGCCCACGTCAGGACCTCCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAVGAA*PTSGPP
Trigger: AGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTTTCCAGGCGCTGTaGGTGCTGCTTTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSFQAL*VLLCPR
Trigger: ACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTTTCCAGGCGCTGTaGGTGCTGCTTTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFQAL*VLLCPR
Trigger: ACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGTCCACGTCAGGTaGTTTGCGTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPVHVR*FACHLL
Trigger: GAGGAGATGACACGCAAACAACCTGACGTGGACAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTGTCATCTCTAACTaGGTGGTTGGGAACTTAGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFAVISN*VVGNLD
Trigger: ATCTAAGTTCCCAACCACCAAGTTAGAGATGACAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCCGGGAAGATGGTTaGGATCTTCGACCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAREDG*DLRPRD
Trigger: GTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGGGGAAGAGCTGTaGCTGGTGTCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAGEEL*LVSPAR
Trigger: CCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTGGGGAAGAGCTGTaGCTGGTGTCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAGEEL*LVSPAR
Trigger: CCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTGCCCGGTTGGCTTaGGCACCTGTGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSARLA*APVEAG
Trigger: CCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLGSAR*ALAPVE
Trigger: CTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGILDG*VSPRLE
Trigger: CTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGILDG*VSPRLE
Trigger: CTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGGACAATGGCTGTCCTaGACAGCTTTACTGTTTATC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFGQWLS*TALLFI
Trigger: GATAAACAGTAAAGCTGTCAAGGACAGCCATTGTCC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCGACAGCACCGGTCTaGAATTTCACTGTATCGGGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPTAPV*NFTVSG
Trigger: GCCCGATACAGTGAAATTCAAGACCGGTGCTGTCGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTGCTGGCTCCAGTTaGATGCCTGAGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPAGSS*MPERTS
Trigger: AGAGGTCCTCTCAGGCATCAAACTGGAGCCAGCAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GCAGGTATATTTTCGTTTGATGGAGTCTTGGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATCACTGAAGAACTGGAAGTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: AGIFSFDGVLEVSQK*LQVSGITEELEVSC
Trigger: GCAGCTTACTTCCAGTTCTTCAGTGATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GATAAAGTGCTCTTCAGCACATGGTCTGGATTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTCCCAACAAGACTGGCAACGGAACTC +
Preference number: 5 (lower is better)
Translates to: DKVLFSTWSGLRGFS*TMVFDLPTRLATEL
Trigger: GAGTTCCGTTGCCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGCTGAAGAGCACTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ACAGCTTTCTGCTCCTCTCCACATGTGCTGAAGATTTCCCCACGGTaGCTGAAGAGCTCATCCATTGAATCTTTGTGTCGAATGATGTCA +
Preference number: 5 (lower is better)
Translates to: TAFCSSPHVLKISPR*LKSSSIESLCRMMS
Trigger: TGACATCATTCGACACAAAGATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAATCTTCAGCACATGTGGAGAGGAGCAGAAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GCAAGCTCAACTTCAATGACTTTTGGGTCTCCACTTATCGGTCTTTaGGCATCCAGCAGCTCTTCAGTGTGTGTTAGCCAGCTCATTAGT +
Preference number: 5 (lower is better)
Translates to: ASSTSMTFGSPLIGL*ASSSSSVCVSQLIS
Trigger: ACTAATGAGCTGGCTAACACACACTGAAGAGCTGCTGGATGCTCAAAGACCGATAAGTGGAGACCCAAAAGTCATTGAAGTTGAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TGGGTTGATTCAAGGACTTTCTGCTACCACTGCGGGATTTCTCCATaGAAGGTGCATGGGTGGGTTCTACACTCTTCCTCTTATATGTCT +
Preference number: 5 (lower is better)
Translates to: WVDSRTFCYHCGISP*KVHGWVLHSSSYMS
Trigger: AGACATATAAGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCATGGAGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAATCAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ATAGTCATCCTATCCCCTGTGACAGTGTCAATGATGCCTCCTGTCTaGAGCTGCCTTATGAGAATAGCGCAAGCCATATCTTGGTCAATC +
Preference number: 5 (lower is better)
Translates to: IVILSPVTVSMMPPV*SCLMRIAQAISWSI
Trigger: GATTGACCAAGATATGGCTTGCGCTATTCTCATAAGGCAGCTTCAGACAGGAGGCATCATTGACACTGTCACAGGGGATAGGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp ACTCTTTTTCCTGTGGCCATGTCTATGATTCCACCAGTGTTCGCCTaGGCTTCCAAAACCTTCAATGCAGAAGCAAAGTCTACTTTCCCG +
Preference number: 5 (lower is better)
Translates to: TLFPVAMSMIPPVFA*ASKTFNAEAKSTFP
Trigger: CGGGAAAGTAGACTTTGCTTCTGCATTGAAGGTTTTGGAAGCTCAGGCGAACACTGGTGGAATCATAGACATGGCCACAGGAAAAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TCTCTTGCAAGGAAGGATTTGAAGCTCCAGCTTCTGATACTTCACTaGGAGAAGCCTCCATCCTTTCTGCAAATTCTGGGAAGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SLARKDLKLQLLILH*EKPPSFLQILGSWV
Trigger: CACCCAACTTCCCAGAATTTGCAGAAAGGATGGAGGCTTCTCTCAGTGAAGTATCAGAAGCTGGAGCTTCAAATCCTTCCTTGCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 90 bp CGCTTTAGCAAGGAGTTCAGAGCTTCAGGACTGCTGCCTCCCTTATaGATACTATCCAGCTCATTCTCAGATTGTTGTAGCCAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RFSKEFRASGLLPPL*ILSSSFSDCCSQFS
Trigger: TGAAAACTGGCTACAACAATCTGAGAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTCTGAACTCCTTGCTAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp ATTCAAGGACTTTCTGCTACCACTGCGGGATTTCTCCATGAAAGGTaGATGGGTGGGTTCTACACTCTTCCTCTTATATGTCTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: IQGLSATTAGFLHER*MGGFYTLPLICLGD
Trigger: GTCACCAAGACATATAAGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCATGGAGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AATGGCTTCTTGTTCTTTGAGGAAAAGCTCCCTTTCAGGGCTCTCTaGAGGAGAGCACTCTATACCTACAACAGACCTTTCACCTTTTGC +
Preference number: 5 (lower is better)
Translates to: NGFLFFEEKLPFRAL*RRALYTYNRPFTFC
Trigger: GCAAAAGGTGAAAGGTCTGTTGTAGGTATAGAGTGCTCTCCTGCAGAGAGCCCTGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp ACATGTTGTTCAACACACAAGCACAGCTGCTTCATCCATTGCAACTaGGACTGGACAGCAGCACTATATGCCTCTACTGTTTGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: TCCSTHKHSCFIHCN*DWTAALYASTVCLA
Trigger: AGCTAAGCAAACAGTAGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CAGAAACTGCAGCATCTCCTGATTCTGCTGAAGAGACAGATCCTGTaGGTGCTCAGATATAAAGAGCTGAATATCCAAAGCAAGGGCATC +
Preference number: 5 (lower is better)
Translates to: QKLQHLLILLKRQIL*VLRYKELNIQSKGI
Trigger: GATGCCCTTGCTTTGGATATTCAGCTCTTTATATCTGAGCACCCACAGGATCTGTCTCTTCAGCAGAATCAGGAGATGCTGCAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp ACTGAGAGAAGCCTCCATCCTTTCTGCAAATTCTGGGAAGTTGGGTaGCATGAAGGACTTCCACGATCTCCTGTTAACATTATCTTTGCG +
Preference number: 5 (lower is better)
Translates to: TERSLHPFCKFWEVG*HEGLPRSPVNIIFA
Trigger: CGCAAAGATAATGTTAACAGGAGATCGTGGAAGTCCTTCATGCCACCCAACTTCCCAGAATTTGCAGAAAGGATGGAGGCTTCTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCTCTCTGGGCAGTTaGATGCCTGAGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSLGS*MPERTS
Trigger: AGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTGTGATGTCATCATaGCGGATATTCACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSVMSS*RIFTSF
Trigger: GAAGCTAGTGAATATCCGCAATGATGACATCACAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGGCCCAGCGTTAGCTaGGGATTGCCATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRPSVS*GLPSVM
Trigger: CATCACAGATGGCAATCCCAAGCTAACGCTGGGCCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGAGTAGTTTCTCTTaGGCTGACATATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKSSFS*ADISPD
Trigger: ATCAGGGGATATGTCAGCCAAAGAGAAACTACTCTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGACCCTCACACTCTaGAATGTACATAATGACATC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFETLTL*NVHNDI
Trigger: GATGTCATTATGTACATTCAAGAGTGTGAGGGTCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCAGAGTTGTGGCACTaGAACCTGATGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAELWH*NLMETA
Trigger: AGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTCTGAGCGCAGAGTaGTGGCACTTGAACCTGATG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLALSAE*WHLNLM
Trigger: CATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTCTGAGCGCAGAGTaGTGGCACTTGAACCTGATG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHALSAE*WHLNLM
Trigger: CATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGAACACTGAATTCTaGTCCTTCACATCACTAAGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFENTEF*SFTSLS
Trigger: GCTTAGTGATGTGAAGGACAAGAATTCAGTGTTCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIMRRR*PGDFCC
Trigger: ACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIMRRR*PGDFCC
Trigger: ACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFETCSF*VVNSSA
Trigger: GGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSQLA*ELLELV
Trigger: AACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSQLA*ELLELV
Trigger: AACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGGGAGGCTGCATATaGCTCCTTAAGCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKGGCI*LLKLTQ
Trigger: CTGGGTGAGCTTAAGGAGCAATATGCAGCCTCCCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGTTTTCAAATTCCTaGTGGTCTTGCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQFSNS*WSCRNF
Trigger: GAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATCTCAAGTCTCCTTaGTGGGAAATGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNLKSP*WEMTSS
Trigger: TGAGGATGTCATTTCCCACAAAGGAGACTTGAGATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTTGCAAGCTGCTGTaGCAGGACTCCGGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCCKLL*QDSGVR
Trigger: TCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTTTTCTACAGGTACTaGGTGTTCAGCCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLFYRY*VFSQFF
Trigger: GAAGAATTGGCTGAACACCAAGTACCTGTAGAAAAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGTCATGAGCTGCTTTTaGAAGCTTTTCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFVMSCF*KLFYRY
Trigger: GTACCTGTAGAAAAGCTTCAAAAAGCAGCTCATGAC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFQAAL*SSNVLL
Trigger: AAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGGAGCTGGAGCTGTaGGAAGCGCTGGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLELEL*EALAQL
Trigger: GAGCTGAGCCAGCGCTTCCAACAGCTCCAGCTCCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAGCTCGCCTCCTTTaGAACCTCCTCCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRARLL*NLLHSA
Trigger: AGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFTVSV*VGDKVA
Trigger: TGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCAGGCCAGGTGGCTaGCAGATTCCTCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISRPGG*QIPLAA
Trigger: AGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCAGGCCAGGTGGCTaGCAGATTCCTCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSRPGG*QIPLAA
Trigger: AGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAACGGGAGTTGAGCTaGTCAGTGAGCTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHERELS*SVSSTH
Trigger: GTGGGTTGAGCTCACTGACAAGCTCAACTCCCGTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGCTGGAACGGGAGTaGAGCTTGTCAGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWLERE*SLSVSS
Trigger: TGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGCTGGAACGGGAGTaGAGCTTGTCAGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWLERE*SLSVSS
Trigger: TGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGAGCAGGTCTTGGTATaGGGTACTTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFEQVLV*GTFNNS
Trigger: GCTATTGTTAAAAGTACCCAATACCAAGACCTGCTC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCATCCATGTTCTGGTaGAGCCCAGCCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGASMFW*SPAFSS
Trigger: AGATGAGAAGGCTGGGCTCAACCAGAACATGGATGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCAATCCCCTCTAGCTaGTTTTCCATGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPIPSS*FSMVRQ
Trigger: CTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGAAGAGGATCCACTaGGTCTTTCTGAAACAGTTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLKRIH*VFLKQF
Trigger: AAACTGTTTCAGAAAGACCAAGTGGATCCTCTTCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTTCCAGCTGTTTTaGCCTGGCTGCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIFQLF*PGCCLA
Trigger: AGCAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGCTGTCTCATGGAATaGTTTAGCCAGAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSCLME*FSQNQD
Trigger: ATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYVEWN*VASCRA
Trigger: AGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAAACTGGGGTATTaGCTCCCCTGTGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLKLGY*LPCGRL
Trigger: CAGTCTCCCACAGGGGAGCAAATACCCCAGTTTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFAARS*SAPCDL
Trigger: AAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTCTGCTCTGTTTTaGAGCCAGACCCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHSALF*SQTQSH
Trigger: GTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTCATGGAATTGCTTaGCCCGCTTCCTGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLHGIA*PASWRH
Trigger: ATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAAGCTTCATGGAATaGCTTTGCCCGCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPSFME*LCPLPG
Trigger: GCCAGGAAGCGGGCAAAGCAATTCCATGAAGCTTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAAGCTTCATGGAATaGCTTTGCCCGCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPSFME*LCPLPG
Trigger: GCCAGGAAGCGGGCAAAGCAATTCCATGAAGCTTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATTTTGTCTGGGTCATaGGAAATCTCCAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFILSGS*EISSSE
Trigger: CTCAGAACTGGAGATTTCCAATGACCCAGACAAAAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMVIQC*MVVMQS
Trigger: CGACTGCATCACGACCATCAAGCACTGGATCACCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTTTCCAGGCGCTGTaGGTGCTGCTTTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFQAL*VLLCPR
Trigger: ACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGTTTCCAGGCGCTGTaGGTGCTGCTTTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFQAL*VLLCPR
Trigger: ACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGTCCACGTCAGGTaGTTTGCGTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPVHVR*FACHLL
Trigger: GAGGAGATGACACGCAAACAACCTGACGTGGACAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGILDG*VSPRLE
Trigger: CTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGILDG*VSPRLE
Trigger: CTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGACATGGTTGGGATTTaGGACGGTTTGGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGDMVGI*DGLVSP
Trigger: AGGGCTCACCAAACCGTCCAAAATCCCAACCATGTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTCTGCAACCCTTTaGTTCCGTCTGCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCSATL*FRLLSQ
Trigger: TTGGCTCAGCAGACGGAACAAAAGGGTTGCAGAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCAATGAGGCCCTTTaGCATGGCTCTGAAGATGGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVNEAL*HGSEDG
Trigger: CCCATCTTCAGAGCCATGCAAAAGGGCCTCATTGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATCTCCACCAGCTCTaGATCCAGCAAAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHLHQL*IQQKQP
Trigger: AGGCTGCTTTTGCTGGATCAAGAGCTGGTGGAGATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTATGGCTTCTTGTTCTTaGAGGAAAAGCTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFMASCS*RKSSLS
Trigger: TGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCAT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCAGTCTTTCTGGTCTaGGGATCTCAGAAGATAATG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSVFLV*GSQKIM
Trigger: CATTATCTTCTGAGATCCCAAGACCAGAAAGACTGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACCCTGGGTCCTCTTaGGCCCACTCTATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDPGSS*AHSIFR
Trigger: TCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTCTGCACTGTCCTaGTGGGCAGTTTCTCCGGAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHSALS*WAVSPE
Trigger: TTCCGGAGAAACTGCCCACAAGGACAGTGCAGAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTCCAAGGATCTCTTaGTGCTTTTCCTTAGGTATC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSPRIS*CFSLGI
Trigger: GATACCTAAGGAAAAGCACAAAGAGATCCTTGGAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCCATGAAGGGGCCTaGTTCATCTCCAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGHEGA*FISKDL
Trigger: GAGATCCTTGGAGATGAACAAGGCCCCTTCATGGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp CAGATCAGTTCAGCTGTGGCTCTGGAGACAAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAGCTAGAAGTTTCCTTCAATTTACAA +
Preference number: 5 (lower is better)
Translates to: QISSAVALETNLCRL*RCLIRKLEVSFNLQ
Trigger: TTGTAAATTGAAGGAAACTTCTAGCTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATTTGTCTCCAGAGCCACAGCTGAACTGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CTCCAAAATGGCCTTCTCAATGTCTGCAGATGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGTATTTCTTGCCAGAGTAGACACCCA +
Preference number: 5 (lower is better)
Translates to: LQNGLLNVCRCTSVR*GSCSLCISCQSRHP
Trigger: TGGGTGTCTACTCTGGCAAGAAATACACAAGGAACAACTACCTCATCTCACACTAGTGCATCTGCAGACATTGAGAAGGCCATTTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TGCTGCTCCAAAATGGCCTTCTCAATGTCTGCAGATGCACTAGTGTaGGATGAGGTAGTTGTTCCTTGTGTATTTCTTGCCAGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: CCSKMAFSMSADALV*DEVVVPCVFLARVD
Trigger: GTCTACTCTGGCAAGAAATACACAAGGAACAACTACCTCATCTCACACTAGTGCATCTGCAGACATTGAGAAGGCCATTTTGGAGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CAATGTCTTGCTTCAGTTTCATGTTGTTGGCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATGCCACCTGATCCCTTTCTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: QCLASVSCCWPRLLG*LLMRVMPPDPFLGF
Trigger: AAAACCTAGAAAGGGATCAGGTGGCATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCAAGACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ACATGTGCTGAAGATTTCCCCACGGTGACTGAAGAGCTCATCCATTaGATCTTTGTGTCGAATGATGTCAATGGAGAAAGCCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: TCAEDFPTVTEELIH*IFVSNDVNGESLLH
Trigger: GTGCAGAAGGCTTTCTCCATTGACATCATTCGACACAAAGATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAATCTTCAGCACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCATCAGCATTATCTTCAGTATCAGTCTTTTCTAACGCCACCGTCTaGCCATCTGCAACACTCTGTCCTTCTTGGCTTTGTTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SSALSSVSVFSNATV*PSATLCPSWLCLWP
Trigger: TGGCCACAAACAAAGCCAAGAAGGACAGAGTGTTGCAGATGGTCAGACGGTGGCGTTAGAAAAGACTGATACTGAAGATAATGCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp ACTCAACAGGTTGCCTGCTGTTTCATAATGAGATCCTTGCTCTTTTaGAACCATTCTCCCTTGACGTTCTCTAGCTTCCTCAGCATCCAG +
Preference number: 5 (lower is better)
Translates to: TQQVACCFIMRSLLF*NHSPLTFSSFLSIQ
Trigger: CTGGATGCTGAGGAAGCTAGAGAACGTCAAGGGAGAATGGTTTCAAAAGAGCAAGGATCTCATTATGAAACAGCAGGCAACCTGTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp TCTTTTACATGTTGTTCAACACACAAGCACAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCAGCACTATATGCCTCTACTGTTTGC +
Preference number: 5 (lower is better)
Translates to: SFTCCSTHKHSCFIH*NWDWTAALYASTVC
Trigger: GCAAACAGTAGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACATGTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp AGATGGCCTTCACAGATAAAGTGCTCTTCAGCACATGGTCTGGATTaGGTGGCTTTAGCTGAACAATGGTTTTTGATCTCCCAACAAGAC +
Preference number: 5 (lower is better)
Translates to: RWPSQIKCSSAHGLD*VALAEQWFLISQQD
Trigger: GTCTTGTTGGGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGCTGAAGAGCACTTTATCTGTGAAGGCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TCAGAAACTTGTTCTTTCTTGGTTGTCAACTCTTCTGCCAGAACCTaGTGCTCCAAAATGGCCTTCTCAATGTCTGCAGATGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: SETCSFLVVNSSART*CSKMAFSMSADALV
Trigger: CACTAGTGCATCTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TCATTCTCAGATTGTTGTAGCCAGTTTTCAAATTCCTTGTGGTCTTaGAGGAACTTCTGCAGTTCATCTCGTAGAGCCTGCGTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SFSDCCSQFSNSLWS*RNFCSSSRRACVCF
Trigger: GAAGCAGACGCAGGCTCTACGAGATGAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTGGCTACAACAATCTGAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp CTTCACTTCAGGCTTCTCGGTTTCTCCACAGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAACTCCAACTCCTCATGCAGACCATC +
Preference number: 5 (lower is better)
Translates to: LHFRLLGFSTGKNQI*SKDSNELQLLMQTI
Trigger: GATGGTCTGCATGAGGAGTTGGAGTTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCCTGTGGAGAAACCGAGAAGCCTGAAGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AAGACTTTCTGCCCTGAGATAGTCACAAATCTCAAGTCTCCTTTGTaGGAAATGACATCCTCAGAGAAGCTTCCTTGCCGCTTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: KTFCPEIVTNLKSPL*EMTSSEKLPCRFSK
Trigger: CTTGCTAAAGCGGCAAGGAAGCTTCTCTGAGGATGTCATTTCCCACAAAGGAGACTTGAGATTTGTGACTATCTCAGGGCAGAAAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TTTCGACACTCTGCTTCAGAGTCCTCTATGTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGCCGTACGTCCTCAATTTGTGACTGG +
Preference number: 5 (lower is better)
Translates to: FRHSASESSMSNLRA*ILLRKSRTSSICDW
Trigger: CCAGTCACAAATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGACATAGAGGACTCTGAAGCAGAGTGTCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp AATTGGGATTCACAGGGCTTCCTAGGATGCTTAGCACTGGAAATTTaGGAGATGGTCCCAGTATACAGTTCTTGTAATGCCTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: NWDSQGFLGCLALEI*EMVPVYSSCNASEV
Trigger: CACTTCTGAGGCATTACAAGAACTGTATACTGGGACCATCTCCCAAATTTCCAGTGCTAAGCATCCTAGGAAGCCCTGTGAATCCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp GCACCTCTGCCTTTAGTAGCCTTTTCCAGATTGATAAGTTCTGTCTaGTCAGCAGTGTCTACCAAACCAAGATTTGAGGCCAAAGTTACC +
Preference number: 5 (lower is better)
Translates to: APLPLVAFSRLISSV*SAVSTKPRFEAKVT
Trigger: GGTAACTTTGGCCTCAAATCTTGGTTTGGTAGACACTGCTGACCAGACAGAACTTATCAATCTGGAAAAGGCTACTAAAGGCAGAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp CAGCTGAGATTTCCTTTCAGCCATAGATTGTTTCATATCCTTGTATaGTTGGAGAGTGTGACTCAGGCTGTCAGCGTCAGTTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: QLRFPFSHRLFHILV*LESVTQAVSVSFSV
Trigger: GACACTGAAACTGACGCTGACAGCCTGAGTCACACTCTCCAACCATACAAGGATATGAAACAATCTATGGCTGAAAGGAAATCTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTCTCTGGGCAGTTaGATGCCTGAGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSLGS*MPERTS
Trigger: AGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCTCTCTGGGCAGTTaGATGCCTGAGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSLGS*MPERTS
Trigger: AGAGGTCCTCTCAGGCATCAAACTGCCCAGAGAGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGGCCCAGCGTTAGCTaGGGATTGCCATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRPSVS*GLPSVM
Trigger: CATCACAGATGGCAATCCCAAGCTAACGCTGGGCCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCGGCTTTGGTATTCTaGCCATCTGGAGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSALVF*PSGVHF
Trigger: GAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTTAGGGTGGTAGCCTaGAGGCAGCTTAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVRVVA*RQLNSA
Trigger: GGCAGAATTAAGCTGCCTCAAGGCTACCACCCTAAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTAGGGTGGTAGCCTaGAGGCAGCTTAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVRVVA*RQLNSA
Trigger: GGCAGAATTAAGCTGCCTCAAGGCTACCACCCTAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTATACAAATCGAAGATaGCCTTCGTCTTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFYTNRR*PSSSED
Trigger: ATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGCTGCTTCATCCATaGCAACTGGGACTGGACAGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQLLHP*QLGLDS
Trigger: GCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGCTGGAGAAAGACGTaGCATTTCATAGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFCWRKT*HFIEIA
Trigger: TGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCAGAGTTGTGGCACTaGAACCTGATGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAELWH*NLMETA
Trigger: AGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTCTGAGCGCAGAGTaGTGGCACTTGAACCTGATG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIALSAE*WHLNLM
Trigger: CATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCTGCTGGGAAAATTTTaGACATTGGTCCAACTTTGT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLLGKF*TLVQLC
Trigger: ACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCAG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAATGGCCTCAGAAACTaGTTCTTTCTTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFNGLRN*FFLGCQ
Trigger: TTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAAGVG*QNHHKG
Trigger: ACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGILQVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAGGGAGGCTGCATATaGCTCCTTAAGCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKGGCI*LLKLTQ
Trigger: CTGGGTGAGCTTAAGGAGCAATATGCAGCCTCCCTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGGGAGGCTGCATATaGCTCCTTAAGCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKGGCI*LLKLTQ
Trigger: CTGGGTGAGCTTAAGGAGCAATATGCAGCCTCCCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTGAGACTGAGCAATaGCCTTCTGCAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSETEQ*PSAAKQ
Trigger: CTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTCAGCTCTGCCAGTTaGCCCTGCAGCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSSAS*PCSTEA
Trigger: AGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAACTGCTGCAGCTTGTaGGAGAGCTGCTCAAACATC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNCCSL*ESCSNI
Trigger: GATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCAGCAGTCGGCTTTaGTTTTCCATGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLASSRL*FSMNCC
Trigger: GCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGAGCTCGCCTCCTTTaGAACCTCCTCCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRARLL*NLLHSA
Trigger: AGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGAGCTCGCCTCCTTTaGAACCTCCTCCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRARLL*NLLHSA
Trigger: AGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAACGGGAGTTGAGCTaGTCAGTGAGCTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIERELS*SVSSTH
Trigger: GTGGGTTGAGCTCACTGACAAGCTCAACTCCCGTTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGCTGGAACGGGAGTaGAGCTTGTCAGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWLERE*SLSVSS
Trigger: TGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGCTGGAACGGGAGTaGAGCTTGTCAGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWLERE*SLSVSS
Trigger: TGAGCTCACTGACAAGCTCAACTCCCGTTCCAGCCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCCTCCTTAATCTCATaGTCTAATTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFASLIS*SNCPKS
Trigger: TGATTTGGGACAATTAGACAATGAGATTAAGGAGGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAACATTTGCTGGAATaGCTGGGTGCTGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKHLLE*LGAGKS
Trigger: GCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATTCAGCATAGCCTaGGACCTTAAGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSFSIA*DLKRLD
Trigger: GTCCAGCCTCTTAAGGTCCAAGGCTATGCTGAATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCATCCATGTTCTGGTaGAGCCCAGCCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLASMFW*SPAFSS
Trigger: AGATGAGAAGGCTGGGCTCAACCAGAACATGGATGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAATCCCCTCTAGCTaGTTTTCCATGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPIPSS*FSMVRQ
Trigger: CTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLRAWI*LRKSRT
Trigger: CGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTGTGGCGGCATCATaGAGCGCTTTCAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAVAAS*SAFSFL
Trigger: TAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTGTGGCGGCATCATaGAGCGCTTTCAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAVAAS*SAFSFL
Trigger: TAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGAGCCTCCTGCAGTaGTGCAATTCTTTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQSLLQ*CNSLCN
Trigger: GTTGCACAAAGAATTGCACAACTGCAGGAGGCTCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTTCCAGCTGTTTTaGCCTGGCTGCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIFQLF*PGCCLA
Trigger: AGCAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAAGTTCTGAGGGCCTaGGAGCTAGTGAGAGTGATG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKVLRA*ELVRVM
Trigger: CATCACTCTCACTAGCTCCAAGGCCCTCAGAACTTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAAACTGGGGTATTaGCTCCCCTGTGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILKLGY*LPCGRL
Trigger: CAGTCTCCCACAGGGGAGCAAATACCCCAGTTTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCACCTCATCTTTTATTaGGGCATACATGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFHLIFY*GIHVFC
Trigger: GCAGAAAACATGTATGCCCAAATAAAAGATGAGGTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFAARS*SAPCDL
Trigger: AAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFAARS*SAPCDL
Trigger: AAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTCAGACCGTGCTTaGATGTCCTCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSDRA*MSSQKN
Trigger: GTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATATCCTGGGTGTCTTaGATGGTGGTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGISWVS*MVVRRA
Trigger: AGCTCTCCTGACCACCATCAAAGACACCCAGGATAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGMVQS*ITVLSS
Trigger: GCTAGATAACACTGTGATCAAGCTCTGCACCATGCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSQRC*SSVSGS
Trigger: AGAACCACTGACAGAACTCAAGCACCTCTGGGAGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTCTGCTCTGTTTTaGAGCCAGACCCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHSALF*SQTQSH
Trigger: GTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTGCTAGAGTAAGCCAGTaGATAAATTCTTGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFARVSQ*INSCKE
Trigger: TTCCTTGCAAGAATTTATCAACTGGCTTACTCTAGC...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATTAGCAAAAACCTaGTGCTCTTCTATCTGGGAA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSLAKT*CSSIWE
Trigger: TTCCCAGATAGAAGAGCACAAGGTTTTTGCTAATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTCATGGAATTGCTTaGCCCGCTTCCTGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLHGIA*PASWRH
Trigger: ATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTCATGGAATTGCTTaGCCCGCTTCCTGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLHGIA*PASWRH
Trigger: ATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCAAGCTTCATGGAATaGCTTTGCCCGCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPSFME*LCPLPG
Trigger: GCCAGGAAGCGGGCAAAGCAATTCCATGAAGCTTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGGCTTCTTCCAACTaGTGCTGTCGCTCTACAGAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKASSN*CCRSTD
Trigger: GTCTGTAGAGCGACAGCACAAGTTGGAAGAAGCCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMVIQC*MVVMQS
Trigger: CGACTGCATCACGACCATCAAGCACTGGATCACCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTGTTGGTGCTGCTTaGCCCACGTCAGGACCTCCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAVGAA*PTSGPP
Trigger: AGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTGTCCACGTCAGGTaGTTTGCGTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPVHVR*FACHLL
Trigger: GAGGAGATGACACGCAAACAACCTGACGTGGACAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGTCCACGTCAGGTaGTTTGCGTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPVHVR*FACHLL
Trigger: GAGGAGATGACACGCAAACAACCTGACGTGGACAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCCGGGAAGATGGTTaGGATCTTCGACCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAREDG*DLRPRD
Trigger: GTCACGGGGTCGAAGATCCAAACCATCTTCCCGGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTGGGGAAGAGCTGTaGCTGGTGTCACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAGEEL*LVSPAR
Trigger: CCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLGSAR*ALAPVE
Trigger: CTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGACATGGTTGGGATTTaGGACGGTTTGGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHDMVGI*DGLVSP
Trigger: AGGGCTCACCAAACCGTCCAAAATCCCAACCATGTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGACATGGTTGGGATTTaGGACGGTTTGGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLDMVGI*DGLVSP
Trigger: AGGGCTCACCAAACCGTCCAAAATCCCAACCATGTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCTCTGCAACCCTTTaGTTCCGTCTGCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCSATL*FRLLSQ
Trigger: TTGGCTCAGCAGACGGAACAAAAGGGTTGCAGAGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCAATGAGGCCCTTTaGCATGGCTCTGAAGATGGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVNEAL*HGSEDG
Trigger: CCCATCTTCAGAGCCATGCAAAAGGGCCTCATTGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCAATGAGGCCCTTTaGCATGGCTCTGAAGATGGG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVNEAL*HGSEDG
Trigger: CCCATCTTCAGAGCCATGCAAAAGGGCCTCATTGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCACAAGGCCTGTGTCTaGGTCAATGAGGCCCTTTTG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHKACV*VNEALL
Trigger: CAAAAGGGCCTCATTGACCAAGACACAGGCCTTGTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCCCTGCCAACTGCTaGACAGGCAACAATTTCAAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPPANC*TGNNFN
Trigger: GTTGAAATTGTTGCCTGTCAAGCAGTTGGCAGGGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCCCCTGCCAACTGCTaGACAGGCAACAATTTCAAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPPANC*TGNNFN
Trigger: GTTGAAATTGTTGCCTGTCAAGCAGTTGGCAGGGGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCATCTCCACCAGCTCTaGATCCAGCAAAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHLHQL*IQQKQP
Trigger: AGGCTGCTTTTGCTGGATCAAGAGCTGGTGGAGATG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAGCTTCTTTTCCCTaGTCATTTCCAATCATTTTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPASFP*SFPIIF
Trigger: GAAAATGATTGGAAATGACAAGGGAAAAGAAGCTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGACCCTGGGTCCTCTTaGGCCCACTCTATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDPGSS*AHSIFR
Trigger: TCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCCTGTCAAGTTCCTTaGCCTGACCCAGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPCQVP*PDPVDL
Trigger: AAGATCTACTGGGTCAGGCAAAGGAACTTGACAGGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGATCCTCGCTGTTaGCATGACGCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPDPRC*HDARRA
Trigger: TGCCCTCCTGGCGTCATGCAAACAGCGAGGATCAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCCTCTTCCAACCGCCGGAGAGCATCACTGATATATTTTACATGCTaGGTTGTTAATGTCACCAAAGCTGTGTATCGAGTCCTTAAGTCC +
Preference number: 5 (lower is better)
Translates to: SSSNRRRASLIYFTC*VVNVTKAVYRVLKS
Trigger: GGACTTAAGGACTCGATACACAGCTTTGGTGACATTAACAACTCAGCATGTAAAATATATCAGTGATGCTCTCCGGCGGTTGGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TCTCTCATTTCTAGCTCCCCTTCCTGTGATAAAGCCATACTCAGCTaGGGTTCTCTATCACTCATGGTTTCTGCTCCAGCTTTATTGAGT +
Preference number: 5 (lower is better)
Translates to: SLISSSPSCDKAILS*GSLSLMVSAPALLS
Trigger: ACTCAATAAAGCTGGAGCAGAAACCATGAGTGATAGAGAACCTCAGCTGAGTATGGCTTTATCACAGGAAGGGGAGCTAGAAATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 90 bp AAGACGTTGCATTTCATAGAAATAGCATCCAGGTCAGATCTCAAATaGTGCAAATCCTCCTGTGTGTGCTCCTGCTCTGCAATCCTCAAT +
Preference number: 5 (lower is better)
Translates to: KTLHFIEIASRSDLK*CKSSCVCSCSAILN
Trigger: ATTGAGGATTGCAGAGCAGGAGCACACACAGGAGGATTTGCAGCATTTGAGATCTGACCTGGATGCTATTTCTATGAAATGCAACGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TTTAATGGCCTCAGAAACTTGTTCTTTCTTGGTTGTCAACTCTTCTaGCAGAACCTGCTGCTCCAAAATGGCCTTCTCAATGTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FNGLRNLFFLGCQLF*QNLLLQNGLLNVCR
Trigger: TCTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp ATTTCATCTACCCTTTGTCCAACAGTGTCACTGATCAGTTTGTACTaGTCGTTGGCATCAGACACAAGTTTATCCAGTCCTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ISSTLCPTVSLISLY*SLASDTSLSSPSLA
Trigger: AGCCAGAGAAGGACTGGATAAACTTGTGTCTGATGCCAACGAGCAGTACAAACTGATCAGTGACACTGTTGGACAAAGGGTAGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TTATGCTGTCTATGGGCAATCTTCTCACCCAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGTTCTCGTATAATATCTCTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: LCCLWAIFSPRFSQR*LSSVSGSRIISLSV
Trigger: AACTGACAGAGATATTATACGAGAACCACTGACAGAACTCAAGCACCTCTGGGAGAATCTGGGTGAGAAGATTGCCCATAGACAGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 90 bp TGTCTACCAAACCAAGATTTGAGGCCAAAGTTACCGAAAGCTTTTTaGCTCGTTTCAGGTCAACAATTCCACCAGTTATCACCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: CLPNQDLRPKLPKAF*LVSGQQFHQLSPVP
Trigger: AGGGACAGGTGATAACTGGTGGAATTGTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAACTTTGGCCTCAAATCTTGGTTTGGTAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp GCAAAGCCTACCTTGCTTTGTTCTGCAGAGTCTGCTAGTTGTATGTaGGGCATCATGTCAGGGATACAAACTGACCTTAAGTTATTGACA +
Preference number: 5 (lower is better)
Translates to: AKPTLLCSAESASCM*GIMSGIQTDLKLLT
Trigger: TGTCAATAACTTAAGGTCAGTTTGTATCCCTGACATGATGCCCCACATACAACTAGCAGACTCTGCAGAACAAAGCAAGGTAGGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp AAGCCCCGAAACATGTTCAATTTCCCCATAAGTTTGACAGCAGTGTaGCTAGACACAAGGCCTTGGGCTATTGCTTCATTTAGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: KPRNMFNFPISLTAV*LDTRPWAIASFSKS
Trigger: ACTCTTACTAAATGAAGCAATAGCCCAAGGCCTTGTGTCTAGCCACACTGCTGTCAAACTTATGGGGAAATTGAACATGTTTCGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp AGACCTTCATCAATGACTTCTTCAGTCGTCAAAGACTCACAGGTCTaGGAGTCAAAGAAGCCCCGAAACATGTTCAATTTCCCCATAAGT +
Preference number: 5 (lower is better)
Translates to: RPSSMTSSVVKDSQV*ESKKPRNMFNFPIS
Trigger: ACTTATGGGGAAATTGAACATGTTTCGGGGCTTCTTTGACTCCCAGACCTGTGAGTCTTTGACGACTGAAGAAGTCATTGATGAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGTGAATGTTTTCTTTaGCACTCGGTCCCGCTCATC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGECFL*HSVPLI
Trigger: GATGAGCGGGACCGAGTGCAAAAGAAAACATTCACC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGTGAATGTTTTCTTTaGCACTCGGTCCCGCTCATC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGECFL*HSVPLI
Trigger: GATGAGCGGGACCGAGTGCAAAAGAAAACATTCACC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCGTTAGCTTGGGATaGCCATCTGTGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSVSLG*PSVMSS
Trigger: TGATGACATCACAGATGGCAATCCCAAGCTAACGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGCAGGAAGAAAAGTaGGTGCATTTGACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQQEEK*VHLTPV
Trigger: CACAGGAGTCAAATGCACCAACTTTTCTTCCTGCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGTTACTCTGCACTaGTACTCTCTCCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPVTLH*YSLHVY
Trigger: GTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCGGCTTTGGTATTCTaGCCATCTGGAGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSALVF*PSGVHF
Trigger: GAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTAGGGTGGTAGCCTaGAGGCAGCTTAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVRVVA*RQLNSA
Trigger: GGCAGAATTAAGCTGCCTCAAGGCTACCACCCTAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTAGGGTGGTAGCCTaGAGGCAGCTTAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVRVVA*RQLNSA
Trigger: GGCAGAATTAAGCTGCCTCAAGGCTACCACCCTAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCACCATTCTGTATCTaGTTTGCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAPFCI*FAICSS
Trigger: GCTGCTGCAGATTGCAAACAAGATACAGAATGGTGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATATGCCTCTACTGTTaGCTTAGCTGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGICLYC*LSWVVL
Trigger: GAGAACCACCCAGCTAAGCAAACAGTAGAGGCATAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCTGGAGACTGAATTaGTTTGAGCAGTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGWRLN*FEQSLL
Trigger: GAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGCTGGAGACTGAATTaGTTTGAGCAGTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGWRLN*FEQSLL
Trigger: GAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCAGAGTTGTGGCACTaGAACCTGATGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAELWH*NLMETA
Trigger: AGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGCACTGCTTCCTCTaGACTCAGCTTGATCTCATA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWHCFL*TQLDLI
Trigger: TATGAGATCAAGCTGAGTCAAGAGGAAGCAGTGCCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTTCCTCAATCCACTaGATGAGAGTTCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVSSIH*MRVPWQ
Trigger: CTGCCATGGAACTCTCATCAAGTGGATTGAGGAAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIMRRR*PGDFCC
Trigger: ACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLELLE*VCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLELLE*VCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHILQVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGGAGAACCTCATATaGCTCCTTTGCCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLENLI*LLCLMK
Trigger: CTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGGGAGGCTGCATATaGCTCCTTAAGCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKGGCI*LLKLTQ
Trigger: CTGGGTGAGCTTAAGGAGCAATATGCAGCCTCCCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTGTATCTTTCTGTaGCATCCTTCAGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWCIFL*HPSVFH
Trigger: ATGAAAAACTGAAGGATGCAACAGAAAGATACACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTTGCAAGCTGCTGTaGCAGGACTCCGGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCCKLL*QDSGVR
Trigger: TCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGTAACTGCTTTGTaGTTGCAAGCTGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPVTAL*LQAAVA
Trigger: TGCAACAGCAGCTTGCAACAACAAAGCAGTTACAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTGAGACTGAGCAATaGCCTTCTGCAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSETEQ*PSAAKQ
Trigger: CTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTGAGACTGAGCAATaGCCTTCTGCAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSETEQ*PSAAKQ
Trigger: CTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTTCAGTTTCATGTaGTTGGCCAAGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCFSFM*LAKASW
Trigger: CCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFLSSNV*LQFHVV
Trigger: AACAACATGAAACTGAAGCAAGACATTGCTAGACAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAACTGCTGCAGCTTGTaGGAGAGCTGCTCAAACATC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNCCSL*ESCSNI
Trigger: GATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGAACTGCTGCAGCTaGTTGGAGAGCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMNCCS*LESCSN
Trigger: GTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTTCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCAGCAGTCGGCTTTaGTTTTCCATGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASSRL*FSMNCC
Trigger: GCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCAGCAGTCGGCTTTaGTTTTCCATGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSASSRL*FSMNCC
Trigger: GCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCACTCACGAAAGTCTTaGCAGGAGGAACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHSRKS*QEEHSL
Trigger: AAGGGAATGTTCCTCCTGCAAAGACTTTCGTGAGTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAACCTGTTTTGGCTaGGGAATCAGGAGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGTCFG*GIRSCD
Trigger: ATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAACCTGTTTTGGCTaGGGAATCAGGAGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGTCFG*GIRSCD
Trigger: ATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTATGGAACCTGTTTaGGCTTGGGAATCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSMEPV*AWESGA
Trigger: AGCTCCTGATTCCCAAGCCAAAACAGGTTCCATACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGAGCTCGCCTCCTTTaGAACCTCCTCCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRARLL*NLLHSA
Trigger: AGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAGCTCGCCTCCTTTaGAACCTCCTCCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRARLL*NLLHSA
Trigger: AGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCAGGCCAGGTGGCTaGCAGATTCCTCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSRPGG*QIPLAA
Trigger: AGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCCTGGAGCAGGTCTaGGTATTGGGTACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVLEQV*VLGTFN
Trigger: GTTAAAAGTACCCAATACCAAGACCTGCTCCAGGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFFSSS*RYCSPM
Trigger: CATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAACATTTGCTGGAATaGCTGGGTGCTGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKHLLE*LGAGKS
Trigger: GCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAACATTTGCTGGAATaGCTGGGTGCTGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKHLLE*LGAGKS
Trigger: GCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCATTCAGCATAGCCTaGGACCTTAAGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSFSIA*DLKRLD
Trigger: GTCCAGCCTCTTAAGGTCCAAGGCTATGCTGAATGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCTATTTCTGAAGAATaGATCAGAATGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSISEE*IRMSAA
Trigger: TGCTGCTGACATTCTGATCAATTCTTCAGAAATAGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCATCCATGTTCTGGTaGAGCCCAGCCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSASMFW*SPAFSS
Trigger: AGATGAGAAGGCTGGGCTCAACCAGAACATGGATGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCATCCATGTTCTGGTaGAGCCCAGCCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASMFW*SPAFSS
Trigger: AGATGAGAAGGCTGGGCTCAACCAGAACATGGATGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTGTTACTACAGGCTaGAGAGCCCAGGGCATCAAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLVTTG*RAQGIK
Trigger: TTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTGTTACTACAGGCTaGAGAGCCCAGGGCATCAAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLVTTG*RAQGIK
Trigger: TTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCAATCCCCTCTAGCTaGTTTTCCATGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPIPSS*FSMVRQ
Trigger: CTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLRAWI*LRKSRT
Trigger: CGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLRAWI*LRKSRT
Trigger: CGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTGTGGCGGCATCATaGAGCGCTTTCAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAVAAS*SAFSFL
Trigger: TAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGTGGCGGCATCATaGAGCGCTTTCAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAVAAS*SAFSFL
Trigger: TAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCAGTTGTGCAATTCTTaGTGCAACCTTTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFQLCNS*CNLFIQ
Trigger: CTGAATAAAAAGGTTGCACAAAGAATTGCACAACTG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGAGCCTCCTGCAGTaGTGCAATTCTTTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQSLLQ*CNSLCN
Trigger: GTTGCACAAAGAATTGCACAACTGCAGGAGGCTCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGAGCCTCCTGCAGTaGTGCAATTCTTTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQSLLQ*CNSLCN
Trigger: GTTGCACAAAGAATTGCACAACTGCAGGAGGCTCTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGCAACTTCTGTTCTaGGATCTGTGCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEQLLF*DLCFHH
Trigger: GTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCCTGGCTGCTGCCTaGCTGAGGAGATCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCLAAA*LRRSVH
Trigger: ATGGACTGATCTCCTCAGCAAGGCAGCAGCCAGGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTTCCAGCTGTTTTaGCCTGGCTGCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIFQLF*PGCCLA
Trigger: AGCAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTTCCAGCTGTTTTaGCCTGGCTGCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIFQLF*PGCCLA
Trigger: AGCAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYVEWN*VASCRA
Trigger: AGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTGTTCTAGACGAATaGGACCGAGAGCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLVLDE*DREPSA
Trigger: AGCTGATGGCTCTCGGTCCAATTCGTCTAGAACAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTGTTCTAGACGAATaGGACCGAGAGCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLVLDE*DREPSA
Trigger: AGCTGATGGCTCTCGGTCCAATTCGTCTAGAACAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTCATCCATTGAATCTTaGTGTCGAATGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFSSIES*CRMMSM
Trigger: CATTGACATCATTCGACACAAAGATTCAATGGATGA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMHSLI*STSAGI
Trigger: GATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFAARS*SAPCDL
Trigger: AAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFAARS*SAPCDL
Trigger: AAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTCCTGGATTTCTTTaGCAGCCAGATCCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCPGFL*QPDPCL
Trigger: CAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTCAGACCGTGCTTaGATGTCCTCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSDRA*MSSQKN
Trigger: GTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATATCCTGGGTGTCTTaGATGGTGGTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHISWVS*MVVRRA
Trigger: AGCTCTCCTGACCACCATCAAAGACACCCAGGATAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATATCCTGGGTGTCTTaGATGGTGGTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLISWVS*MVVRRA
Trigger: AGCTCTCCTGACCACCATCAAAGACACCCAGGATAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCAGCTTCAACCTGTaGCTTGATGATGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSSFNL*LDDGWV
Trigger: GACCCATCCATCATCAAGCAACAGGTTGAAGCTGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCAGCTTCAACCTGTaGCTTGATGATGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSFNL*LDDGWV
Trigger: GACCCATCCATCATCAAGCAACAGGTTGAAGCTGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGMVQS*ITVLSS
Trigger: GCTAGATAACACTGTGATCAAGCTCTGCACCATGCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFSQRC*SSVSGS
Trigger: AGAACCACTGACAGAACTCAAGCACCTCTGGGAGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSQRC*SSVSGS
Trigger: AGAACCACTGACAGAACTCAAGCACCTCTGGGAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTTGCCACCGTGGCTaGATGAGCCAAAACATCATT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCCHRG*MSQNII
Trigger: AATGATGTTTTGGCTCATCAAGCCACGGTGGCAACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFWFSIL*SSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTTTTAGATGCAGAAAGTaGGTTCTCCATTCTATTGAG +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFFRCRK*VLHSIE
Trigger: CTCAATAGAATGGAGAACCAACTTTCTGCATCTAAA...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCACTCTGCTCTGTTTTaGAGCCAGACCCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHSALF*SQTQSH
Trigger: GTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACTCTGCTCTGTTTTaGAGCCAGACCCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHSALF*SQTQSH
Trigger: GTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTCCAGTTGATAAATTCTaGCAAGGAATTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFPVDKF*QGILEF
Trigger: GAATTCCAGAATTCCTTGCAAGAATTTATCAACTGG...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTCATGGAATTGCTTaGCCCGCTTCCTGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLHGIA*PASWRH
Trigger: ATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTCATGGAATTGCTTaGCCCGCTTCCTGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILHGIA*PASWRH
Trigger: ATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGACAGTATCCCATTaGTCTCTGACTTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQTVSH*SLTSPS
Trigger: GCTAGGAGAAGTCAGAGACAAATGGGATACTGTCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGGCTTCTTCCAACTaGTGCTGTCGCTCTACAGAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKASSN*CCRSTD
Trigger: GTCTGTAGAGCGACAGCACAAGTTGGAAGAAGCCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMVIQC*MVVMQS
Trigger: CGACTGCATCACGACCATCAAGCACTGGATCACCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGTTTCCAGGCGCTGTaGGTGCTGCTTTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSFQAL*VLLCPR
Trigger: ACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCACGTCAGGTTGTTaGCGTGTCATCTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSTSGC*RVISSI
Trigger: TATGGAGGAGATGACACGCAAACAACCTGACGTGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCACGTCAGGTTGTTaGCGTGTCATCTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSTSGC*RVISSI
Trigger: TATGGAGGAGATGACACGCAAACAACCTGACGTGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFLLYV*VTLSTS
Trigger: TGACGTGGACAGGGTCACCAAGACATATAAGAGGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGILDG*VSPRLE
Trigger: CTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGACATGGTTGGGATTTaGGACGGTTTGGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIDMVGI*DGLVSP
Trigger: AGGGCTCACCAAACCGTCCAAAATCCCAACCATGTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGACATGGTTGGGATTTaGGACGGTTTGGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSDMVGI*DGLVSP
Trigger: AGGGCTCACCAAACCGTCCAAAATCCCAACCATGTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCTCTGCAACCCTTTaGTTCCGTCTGCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICSATL*FRLLSQ
Trigger: TTGGCTCAGCAGACGGAACAAAAGGGTTGCAGAGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACAAGGCCTGTGTCTaGGTCAATGAGGCCCTTTTG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHKACV*VNEALL
Trigger: CAAAAGGGCCTCATTGACCAAGACACAGGCCTTGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGCCGGACAGTGACTaGCCTGTCTATCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQPDSD*PVYQPF
Trigger: GAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCTGTGTCCTGTTCTaGGATCTACTATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVCVLF*DLLCHQ
Trigger: CTGGTGGCATAGTAGATCCAAGAACAGGACACAGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGATACCACTCTCTGTaGCTTTTTCCCAGGACCAAA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGYHSL*LFPRTK
Trigger: TTTGGTCCTGGGAAAAAGCAACAGAGAGTGGTATCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCAGCAAAGCCTACCTaGCTTTGTTCTGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAAKPT*LCSAES
Trigger: AGACTCTGCAGAACAAAGCAAGGTAGGCTTTGCTGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAGAAGTGTTGAGCCTTaGATGCTGAATTTCAAATAC +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFRSVEP*MLNFKY
Trigger: GTATTTGAAATTCAGCATCAAAGGCTCAACACTTCT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCCCTCTAAAATCCTaGTGGCTGTCTCCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVPLKS*WLSPCQ
Trigger: TTGACAAGGAGACAGCCACAAGGATTTTAGAGGGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTGAGCACAGGAGTCACTGAGGGCTGGGTTGGACAGTTAGTTACAGATCAGTTTAAGGGCTTCCTTTGTTaGAGGATGGAAAAATTGATA +
Preference number: 5 (lower is better)
Translates to: VSTGVTEGWVGQLVTDQFKGFLC*RMEKLI
Trigger: TATCAATTTTTCCATCCTCAAACAAAGGAAGCCCTT...AAACTGATCTGTAACTAACTGTCCAACCCAGCCCTCAGTGACTCCTGTGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGAGGGAAGCATCTTaGGATGTCATCTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVREAS*DVIWEG
Trigger: CCCTTCCCAGATGACATCCAAAGATGCTTCCCTCAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCCTGTCAAGTTCCTTaGCCTGACCCAGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPCQVP*PDPVDL
Trigger: AAGATCTACTGGGTCAGGCAAAGGAACTTGACAGGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAGGCTCTCAGATCTaGAAGTTTGCCTTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPGSQI*KFALQF
Trigger: GAACTGCAAGGCAAACTTCAAGATCTGAGAGCCTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCATATCCTTGTATGGTaGGAGAGTGTGACTCAGGCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGHILVW*ESVTQA
Trigger: AGCCTGAGTCACACTCTCCAACCATACAAGGATATG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCTTAAAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLKVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTTTAAGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS TCA 90 bp AGTCTTGGAGGTTTCTCAGAAATGACTCCAGGTCTCGGGCATCACTaGAGAACTGGAAGTAAGCTGCATTCTCTTTTACATGTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: SLGGFSEMTPGLGHH*RTGSKLHSLLHVVQ
Trigger: TTGAACAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTCTTCAGTGATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp CAGCCTTCTCATCTCGGATCTCATCTTCATCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCACTATTCAGTATTTCCAGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: QPSHLGSHLHLFLKN*SECQQHYSVFPAGS
Trigger: GCTCCCTGCTGGAAATACTGAATAGTGCTGCTGACATTCTGATCAATTCTTCAGAAATAGATGAAGATGAGATCCGAGATGAGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp ATTGATAAGTTCTGTCTGGTCAGCAGTGTCTACCAAACCAAGATTTaGGGCCAAAGTTACCGAAAGCTTTTTGCCTCGTTTCAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: IDKFCLVSSVYQTKI*GQSYRKLFASFQVN
Trigger: GTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAACTTTGGCCTCAAATCTTGGTTTGGTAGACACTGCTGACCAGACAGAACTTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp TCTTTGTTCTGTGAAAGAAATTGGGATTCACAGGGCTTCCTAGGATaGTTAGCACTGGAAATTTGGGAGATGGTCCCAGTATACAGTTCT +
Preference number: 5 (lower is better)
Translates to: SLFCERNWDSQGFLG*LALEIWEMVPVYSS
Trigger: AGAACTGTATACTGGGACCATCTCCCAAATTTCCAGTGCTAAGCATCCTAGGAAGCCCTGTGAATCCCAATTTCTTTCACAGAACAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp CTAGTTTCCTCTCTGGGTTTCAAATCACAAGATTCTGAGCAGGGATaGGTCACCGAAACTTGGTATGAAGATTCACCCTCAAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: LVSSLGFKSQDSEQG*VTETWYEDSPSKPK
Trigger: TTTTGGTTTTGAGGGTGAATCTTCATACCAAGTTTCGGTGACGCATCCCTGCTCAGAATCTTGTGATTTGAAACCCAGAGAGGAAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 90 bp ACTCCTTCTTCACATAAACATTCCTTCTCAAGTTCAAGAAACATTTaGACAGAATCTGTGTCAGAGAGCTGCTCTGCTTCAACAGGGCAC +
Preference number: 5 (lower is better)
Translates to: TPSSHKHSFSSSRNI*TESVSESCSASTGH
Trigger: GTGCCCTGTTGAAGCAGAGCAGCTCTCTGACACAGATTCTGTGCAAATGTTTCTTGAACTTGAGAAGGAATGTTTATGTGAAGAAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 90 bp GTTCCATTGTCAACTCAGAGAAGTAGGTTTTCTTGGCTGAGATATTaGGATTACTGTCACTCCAATCACATGCTAGTTCCTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VPLSTQRSRFSWLRY*DYCHSNHMLVPLPP
Trigger: AGGAGGAAGAGGAACTAGCATGTGATTGGAGTGACAGTAATCCCAATATCTCAGCCAAGAAAACCTACTTCTCTGAGTTGACAATGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp CCTCCAGGAGTAGTCGGATATTCTTTAGCTCAGAGATGTATACCTTaGCCAAAGTCTCTTCTTTGTCCTCATTCTCCAGTGATTTCATCA +
Preference number: 5 (lower is better)
Translates to: PPGVVGYSLAQRCIP*PKSLLCPHSPVISS
Trigger: TGATGAAATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGCCAAGGTATACATCTCTGAGCTAAAGAATATCCGACTACTCCTGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp GCTGAATTTCAAATACTTCTGGAAGAATTACTTGACAGTCATCTCTaGATGTTAGCATCTCCACCAGCTCTTGATCCAGCAAAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: AEFQILLEELLDSHL*MLASPPALDPAKAA
Trigger: GGCTGCTTTTGCTGGATCAAGAGCTGGTGGAGATGCTAACATCCAGAGATGACTGTCAAGTAATTCTTCCAGAAGTATTTGAAATTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp CTAGACACAAGGCCTTGGGCTATTGCTTCATTTAGTAAGAGTTTCTaGCCTGTTTCTTCATTAAAGATACCACCATCCTGTAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LDTRPWAIASFSKSF*PVSSLKIPPSCSCA
Trigger: TGCACAGCTACAGGATGGTGGTATCTTTAATGAAGAAACAGGCCAGAAACTCTTACTAAATGAAGCAATAGCCCAAGGCCTTGTGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGTGAATGTTTTCTTTaGCACTCGGTCCCGCTCATC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGECFL*HSVPLI
Trigger: GATGAGCGGGACCGAGTGCAAAAGAAAACATTCACC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCGTTAGCTTGGGATaGCCATCTGTGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSVSLG*PSVMSS
Trigger: TGATGACATCACAGATGGCAATCCCAAGCTAACGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCGTTAGCTTGGGATaGCCATCTGTGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSVSLG*PSVMSS
Trigger: TGATGACATCACAGATGGCAATCCCAAGCTAACGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGGCCCAGCGTTAGCTaGGGATTGCCATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRPSVS*GLPSVM
Trigger: CATCACAGATGGCAATCCCAAGCTAACGCTGGGCCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGTTACTCTGCACTaGTACTCTCTCCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPVTLH*YSLHVY
Trigger: GTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTGTTACTCTGCACTaGTACTCTCTCCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPVTLH*YSLHVY
Trigger: GTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCGGCTTTGGTATTCTaGCCATCTGGAGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSALVF*PSGVHF
Trigger: GAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCACCATTCTGTATCTaGTTTGCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAPFCI*FAICSS
Trigger: GCTGCTGCAGATTGCAAACAAGATACAGAATGGTGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCACCATTCTGTATCTaGTTTGCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAPFCI*FAICSS
Trigger: GCTGCTGCAGATTGCAAACAAGATACAGAATGGTGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTACAACCTAGCCTCTTaGACACTTGAGCCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYNLAS*TLEPSS
Trigger: AGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTTGTA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCCTTCCAGTTCCATaGTCAACTCAGAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLPVP*STQRSR
Trigger: CCTACTTCTCTGAGTTGACAATGGAACTGGAAGGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCCTTCCAGTTCCATaGTCAACTCAGAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLPVP*STQRSR
Trigger: CCTACTTCTCTGAGTTGACAATGGAACTGGAAGGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATATGCCTCTACTGTTaGCTTAGCTGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHICLYC*LSWVVL
Trigger: GAGAACCACCCAGCTAAGCAAACAGTAGAGGCATAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATATGCCTCTACTGTTaGCTTAGCTGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLICLYC*LSWVVL
Trigger: GAGAACCACCCAGCTAAGCAAACAGTAGAGGCATAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGCTGCTTCATCCATaGCAACTGGGACTGGACAGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQLLHP*QLGLDS
Trigger: GCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTGAACAATGGTTTTaGATCTCCCAACAAGACTGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAEQWF*ISQQDW
Trigger: CCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAKVSS*SSFSSD
Trigger: ATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGCTGGAGACTGAATTaGTTTGAGCAGTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGWRLN*FEQSLL
Trigger: GAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGCACTGCTTCCTCTaGACTCAGCTTGATCTCATA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWHCFL*TQLDLI
Trigger: TATGAGATCAAGCTGAGTCAAGAGGAAGCAGTGCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGCACTGCTTCCTCTaGACTCAGCTTGATCTCATA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWHCFL*TQLDLI
Trigger: TATGAGATCAAGCTGAGTCAAGAGGAAGCAGTGCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGTTCTGCCACTTTCTaGGCCTTAGTGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCSATF*ALVISS
Trigger: TGAGGAAATCACTAAGGCCAAGAAAGTGGCAGAACA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTTCCTCAATCCACTaGATGAGAGTTCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVSSIH*MRVPWQ
Trigger: CTGCCATGGAACTCTCATCAAGTGGATTGAGGAAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAAGVG*QNHHKG
Trigger: ACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAAGVG*QNHHKG
Trigger: ACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILELLE*VCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLELLE*VCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSQLA*ELLELV
Trigger: AACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTCTGCAGAGTCTTTaGTTCCGTCTGCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFLQSL*FRLLSQ
Trigger: TTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMAGVL*FLQSLL
Trigger: CAAAAGACTCTGCAGAAACAACAAGACACCTGCCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLMAGV*LFLQSL
Trigger: AAGACTCTGCAGAAACAACAAGACACCTGCCATAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIILQVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSILQVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGGAGAACCTCATATaGCTCCTTTGCCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLENLI*LLCLMK
Trigger: CTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAATTCCTTGTGGTCTaGCAGGAACTTCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKFLVV*QELLQF
Trigger: GAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAACTGCTTTGTTGTaGCAAGCTGCTGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVTALL*QAAVAG
Trigger: TCCTGCAACAGCAGCTTGCAACAACAAAGCAGTTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTGTAACTGCTTTGTaGTTGCAAGCTGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPVTAL*LQAAVA
Trigger: TGCAACAGCAGCTTGCAACAACAAAGCAGTTACAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGAGACTGAGCAATaGCCTTCTGCAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSETEQ*PSAAKQ
Trigger: CTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGCTTCAGTTTCATGTaGTTGGCCAAGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCFSFM*LAKASW
Trigger: CCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTGCTCTCCTTTTCTaGCTGCTGGAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVALLF*LLELEL
Trigger: CAGCTCCAGCTCCAGCAGCAAGAAAAGGAGAGCAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATGAACTGCTGCAGCTaGTTGGAGAGCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIMNCCS*LESCSN
Trigger: GTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTTCAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCACTCACGAAAGTCTTaGCAGGAGGAACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLHSRKS*QEEHSL
Trigger: AAGGGAATGTTCCTCCTGCAAAGACTTTCGTGAGTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCACTCACGAAAGTCTTaGCAGGAGGAACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHSRKS*QEEHSL
Trigger: AAGGGAATGTTCCTCCTGCAAAGACTTTCGTGAGTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAACCTGTTTTGGCTaGGGAATCAGGAGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGTCFG*GIRSCD
Trigger: ATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAACCTGTTTTGGCTaGGGAATCAGGAGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGTCFG*GIRSCD
Trigger: ATCACAGCTCCTGATTCCCAAGCCAAAACAGGTTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTATGGAACCTGTTTaGGCTTGGGAATCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSMEPV*AWESGA
Trigger: AGCTCCTGATTCCCAAGCCAAAACAGGTTCCATACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTTCCCATCGGGAATaGAGGTCCTCTTGCATTTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFSHRE*RSSCIF
Trigger: GAAAATGCAAGAGGACCTCAATTCCCGATGGGAAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWAFNM*GSIDKG
Trigger: TCCCTTGTCTATTGACCCCAACATGTTGAATGCCCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAACGGGAGTTGAGCTaGTCAGTGAGCTCAACCCAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNERELS*SVSSTH
Trigger: GTGGGTTGAGCTCACTGACAAGCTCAACTCCCGTTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATAGCTTGGTCAATTaGGCTGGAACGGGAGTTGAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNSLVN*AGTGVE
Trigger: CTCAACTCCCGTTCCAGCCAAATTGACCAAGCTATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAATAGCTTGGTCAATTaGGCTGGAACGGGAGTTGAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNSLVN*AGTGVE
Trigger: CTCAACTCCCGTTCCAGCCAAATTGACCAAGCTATT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCCTGGAGCAGGTCTaGGTATTGGGTACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVLEQV*VLGTFN
Trigger: GTTAAAAGTACCCAATACCAAGACCTGCTCCAGGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFFSSS*RYCSPM
Trigger: CATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFFSSS*RYCSPM
Trigger: CATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAACATTTGCTGGAATaGCTGGGTGCTGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKHLLE*LGAGKS
Trigger: GCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCTGCATACAGTCCTaGAGCCTAGACTGTCGATTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFCIQS*SLDCRF
Trigger: AAATCGACAGTCTAGGCTCAAGGACTGTATGCAGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATTCAGCATAGCCTaGGACCTTAAGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSFSIA*DLKRLD
Trigger: GTCCAGCCTCTTAAGGTCCAAGGCTATGCTGAATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATTCAGCATAGCCTaGGACCTTAAGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISFSIA*DLKRLD
Trigger: GTCCAGCCTCTTAAGGTCCAAGGCTATGCTGAATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTGTTACTACAGGCTaGAGAGCCCAGGGCATCAAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILVTTG*RAQGIK
Trigger: TTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTGTTACTACAGGCTaGAGAGCCCAGGGCATCAAA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLVTTG*RAQGIK
Trigger: TTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLRAWI*LRKSRT
Trigger: CGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGAGCCTCCTGCAGTaGTGCAATTCTTTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQSLLQ*CNSLCN
Trigger: GTTGCACAAAGAATTGCACAACTGCAGGAGGCTCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGCAACTTCTGTTCTaGGATCTGTGCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEQLLF*DLCFHH
Trigger: GTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCAACTTCTGTTCTaGGATCTGTGCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEQLLF*DLCFHH
Trigger: GTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAAGTTCTGAGGGCCTaGGAGCTAGTGAGAGTGATG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKVLRA*ELVRVM
Trigger: CATCACTCTCACTAGCTCCAAGGCCCTCAGAACTTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAAGTTCTGAGGGCCTaGGAGCTAGTGAGAGTGATG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKVLRA*ELVRVM
Trigger: CATCACTCTCACTAGCTCCAAGGCCCTCAGAACTTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGTTCCTTCTGTCTTaGCTGAAACTGGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQFLLS*LKLGYL
Trigger: CAAATACCCCAGTTTCAGCAAAGACAGAAGGAACTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVSLIS*YCSLAS
Trigger: TGATGCCAACGAGCAGTACAAACTGATCAGTGACAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVSLIS*YCSLAS
Trigger: TGATGCCAACGAGCAGTACAAACTGATCAGTGACAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAISFR*VSATQA
Trigger: AGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTGTTCTAGACGAATaGGACCGAGAGCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLVLDE*DREPSA
Trigger: AGCTGATGGCTCTCGGTCCAATTCGTCTAGAACAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMHSLI*STSAGI
Trigger: GATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACGGTGGCACTTTTATaGTCACTGATGCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTVALL*SLMHSL
Trigger: CAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACGGTGGCACTTTTATaGTCACTGATGCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTVALL*SLMHSL
Trigger: CAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTCCTGGATTTCTTTaGCAGCCAGATCCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCPGFL*QPDPCL
Trigger: CAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTCAGACCGTGCTTaGATGTCCTCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSDRA*MSSQKN
Trigger: GTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATATCCTGGGTGTCTTaGATGGTGGTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIISWVS*MVVRRA
Trigger: AGCTCTCCTGACCACCATCAAAGACACCCAGGATAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATATCCTGGGTGTCTTaGATGGTGGTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSISWVS*MVVRRA
Trigger: AGCTCTCCTGACCACCATCAAAGACACCCAGGATAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGASTCC*MMDGSI
Trigger: TATTGACCCATCCATCATCAAGCAACAGGTTGAAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCAGCTTCAACCTGTaGCTTGATGATGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSFNL*LDDGWV
Trigger: GACCCATCCATCATCAAGCAACAGGTTGAAGCTGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGCAGCTTCAACCTGTaGCTTGATGATGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSFNL*LDDGWV
Trigger: GACCCATCCATCATCAAGCAACAGGTTGAAGCTGCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGMVQS*ITVLSS
Trigger: GCTAGATAACACTGTGATCAAGCTCTGCACCATGCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFSQRC*SSVSGS
Trigger: AGAACCACTGACAGAACTCAAGCACCTCTGGGAGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTTGCCACCGTGGCTaGATGAGCCAAAACATCATT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCCHRG*MSQNII
Trigger: AATGATGTTTTGGCTCATCAAGCCACGGTGGCAACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGTTGCCACCGTGGCTaGATGAGCCAAAACATCATT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHCCHRG*MSQNII
Trigger: AATGATGTTTTGGCTCATCAAGCCACGGTGGCAACA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAACTGGTTCCCTGTTaGATCCAGTTCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQLVPC*IQFNDL
Trigger: CAGATCATTGAACTGGATCAAACAGGGAACCAGTTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAAGCTTCATGGAATaGCTTTGCCCGCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPSFME*LCPLPG
Trigger: GCCAGGAAGCGGGCAAAGCAATTCCATGAAGCTTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGACAGTATCCCATTaGTCTCTGACTTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQTVSH*SLTSPS
Trigger: GCTAGGAGAAGTCAGAGACAAATGGGATACTGTCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGACAGTATCCCATTaGTCTCTGACTTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQTVSH*SLTSPS
Trigger: GCTAGGAGAAGTCAGAGACAAATGGGATACTGTCTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGGCTTCTTCCAACTaGTGCTGTCGCTCTACAGAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKASSN*CCRSTD
Trigger: GTCTGTAGAGCGACAGCACAAGTTGGAAGAAGCCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGGCTTCTTCCAACTaGTGCTGTCGCTCTACAGAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKASSN*CCRSTD
Trigger: GTCTGTAGAGCGACAGCACAAGTTGGAAGAAGCCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSSRLC*ETESLH
Trigger: GTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGCTCAAGCCGGCTTaGCTTGGAAACAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLKPA*LGNREF
Trigger: AAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCGAAAGCGAAGTGTTaGTTCTGCTTCAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSKAKC*FCFRKP
Trigger: TGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCACGTCAGGTTGTTaGCGTGTCATCTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISTSGC*RVISSI
Trigger: TATGGAGGAGATGACACGCAAACAACCTGACGTGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGTCCACGTCAGGTaGTTTGCGTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPVHVR*FACHLL
Trigger: GAGGAGATGACACGCAAACAACCTGACGTGGACAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFLLYV*VTLSTS
Trigger: TGACGTGGACAGGGTCACCAAGACATATAAGAGGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFLLYV*VTLSTS
Trigger: TGACGTGGACAGGGTCACCAAGACATATAAGAGGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTGTCATCTCTAACTaGGTGGTTGGGAACTTAGAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAVISN*VVGNLD
Trigger: ATCTAAGTTCCCAACCACCAAGTTAGAGATGACAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCACTTGGAATCTTTTaGCACACTTGCACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPLGIF*HTCTEP
Trigger: TGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCACTTGGAATCTTTTaGCACACTTGCACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPLGIF*HTCTEP
Trigger: TGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAACACTCTGTCCTTCTaGGCTTTGTTTGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNTLSF*ALFVAI
Trigger: GATGGCCACAAACAAAGCCAAGAAGGACAGAGTGTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCCCTCTAAAATCCTaGTGGCTGTCTCCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVPLKS*WLSPCQ
Trigger: TTGACAAGGAGACAGCCACAAGGATTTTAGAGGGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTTACCGAAAGCTTTTaGCCTCGTTTCAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVTESF*PRFRST
Trigger: TGTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTCATTTGGACACTTaGCTCTCCACCCATCTCTCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAHLDT*LSTHLS
Trigger: AGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCAGCCATGTCTCCTTaGGAAATGTGGGGTACATCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAAMSP*EMWGTS
Trigger: AGATGTACCCCACATTTCCAAAGGAGACATGGCTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCAGCCATGTCTCCTTaGGAAATGTGGGGTACATCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAAMSP*EMWGTS
Trigger: AGATGTACCCCACATTTCCAAAGGAGACATGGCTGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGACCCTGGGTCCTCTTaGGCCCACTCTATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNDPGSS*AHSIFR
Trigger: TCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTTGAAGTTTGCCTaGCAGTTCCTTGTGCCGATT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGILKFA*QFLVPI
Trigger: AATCGGCACAAGGAACTGCAAGGCAAACTTCAAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMAGVL*FLQSLD
Trigger: GTCAAGACTCTGCAGAAACAACAAGACACCTGCCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCGGAAATTCCACCAGTaGGCTCACAGACTTCTCACA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRKFHQ*AHRLLT
Trigger: TGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCCG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGTGGGAGGGGCACTaGGAACACTCTTGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLWEGH*EHSWFF
Trigger: GAAGAACCAAGAGTGTTCCAAGTGCCCCTCCCACAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS TCA 90 bp CTTCTACTACTTTCTCTTCCTCTTCCAACCGCCGGAGAGCATCACTaGTATATTTTACATGCTGAGTTGTTAATGTCACCAAAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LLLLSLPLPTAGEHH*YILHAELLMSPKLC
Trigger: ACACAGCTTTGGTGACATTAACAACTCAGCATGTAAAATATATCAGTGATGCTCTCCGGCGGTTGGAAGAGGAAGAGAAAGTAGTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp GTTGAGCCCAGCCTTCTCATCTCGGATCTCATCTTCATCTATTTCTaGAGAATTGATCAGAATGTCAGCAGCACTATTCAGTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: VEPSLLISDLIFIYF*RIDQNVSSTIQYFQ
Trigger: CTGGAAATACTGAATAGTGCTGCTGACATTCTGATCAATTCTTCAGAAATAGATGAAGATGAGATCCGAGATGAGAAGGCTGGGCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TTCTCTCCAATCTGTTCCACTTGGAATCTTTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACCTCATCTTCAATCTTATCTGCATCA +
Preference number: 5 (lower is better)
Translates to: FSPICSTWNLFAHLH*ATCLVTSSSILSAS
Trigger: TGATGCAGATAAGATTGAAGATGAGGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 90 bp TTTTGCTTCAGTACAGTTTTCCTGACTGGGATAGTCTTTGTTCTGTaGAAGAAATTGGGATTCACAGGGCTTCCTAGGATGCTTAGCACT +
Preference number: 5 (lower is better)
Translates to: FCFSTVFLTGIVFVL*KKLGFTGLPRMLST
Trigger: AGTGCTAAGCATCCTAGGAAGCCCTGTGAATCCCAATTTCTTTCACAGAACAAAGACTATCCCAGTCAGGAAAACTGTACTGAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp AAGATGCTGGCAGATACTTTATTATCTGAAGAAGCTTTCTCATCTTaGCGCTGGCCTTCCATCTCTACTGAAATCTTCCTGCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KMLADTLLSEEAFSS*RWPSISTEIFLPFS
Trigger: AGAAAAGGGCAGGAAGATTTCAGTAGAGATGGAAGGCCAGCGTCAAGATGAGAAAGCTTCTTCAGATAATAAAGTATCTGCCAGCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp GGGCTTTTACTGTTTCTGTCTTGGTTGGAGACAAAGTGGCATCCATaGCTTTCAGGACTTCTTCTTTTGATTCTAACCACTGTAATACAG +
Preference number: 5 (lower is better)
Translates to: GLLLFLSWLETKWHP*LSGLLLLILTTVIQ
Trigger: CTGTATTACAGTGGTTAGAATCAAAAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp ATTCTGCTTGGGCTTTTACTGTTTCTGTCTTGGTTGGAGACAAAGTaGCATCCATGGCTTTCAGGACTTCTTCTTTTGATTCTAACCACT +
Preference number: 5 (lower is better)
Translates to: ILLGLLLFLSWLETK*HPWLSGLLLLILTT
Trigger: AGTGGTTAGAATCAAAAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAAAGCCCAAGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp ATATATAGGTCTTGGACATCAGTAGTCTCCTGTCTTGTGGTAATTTaGGCAGCCATGTCTCCTTTGGAAATGTGGGGTACATCTGAAATT +
Preference number: 5 (lower is better)
Translates to: IYRSWTSVVSCLVVI*AAMSPLEMWGTSEI
Trigger: AATTTCAGATGTACCCCACATTTCCAAAGGAGACATGGCTGCCCAAATTACCACAAGACAGGAGACTACTGATGTCCAAGACCTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGATCATTGATGTGCTaGCGGACCTTCATCAAGTGT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRSLMC*RTFIKC
Trigger: ACACTTGATGAAGGTCCGCAAGCACATCAATGATCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAAGAGTAGTTTCTCTTaGGCTGACATATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGKSSFS*ADISPD
Trigger: ATCAGGGGATATGTCAGCCAAAGAGAAACTACTCTT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGCAGGAAGAAAAGTaGGTGCATTTGACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQQEEK*VHLTPV
Trigger: CACAGGAGTCAAATGCACCAACTTTTCTTCCTGCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCACCATTCTGTATCTaGTTTGCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAPFCI*FAICSS
Trigger: GCTGCTGCAGATTGCAAACAAGATACAGAATGGTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGACCCTCACACTCTaGAATGTACATAATGACATC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGETLTL*NVHNDI
Trigger: GATGTCATTATGTACATTCAAGAGTGTGAGGGTCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTACAACCTAGCCTCTTaGACACTTGAGCCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHYNLAS*TLEPSS
Trigger: AGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTTGTA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTACAACCTAGCCTCTTaGACACTTGAGCCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYNLAS*TLEPSS
Trigger: AGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTTGTA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCCTTCCAGTTCCATaGTCAACTCAGAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLPVP*STQRSR
Trigger: CCTACTTCTCTGAGTTGACAATGGAACTGGAAGGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATATGCCTCTACTGTTaGCTTAGCTGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIICLYC*LSWVVL
Trigger: GAGAACCACCCAGCTAAGCAAACAGTAGAGGCATAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTGAACAATGGTTTTaGATCTCCCAACAAGACTGG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAEQWF*ISQQDW
Trigger: CCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTGAACAATGGTTTTaGATCTCCCAACAAGACTGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAEQWF*ISQQDW
Trigger: CCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGGAGATAAGGCTTTaGGTGTTAATGTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQEIRL*VLMCSW
Trigger: CCAGCTACACATTAACACCAAAAGCCTTATCTCCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAKVSS*SSFSSD
Trigger: ATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCAGAGTTGTGGCACTaGAACCTGATGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAELWH*NLMETA
Trigger: AGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGCACTGCTTCCTCTaGACTCAGCTTGATCTCATA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWHCFL*TQLDLI
Trigger: TATGAGATCAAGCTGAGTCAAGAGGAAGCAGTGCCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGCACTGCTTCCTCTaGACTCAGCTTGATCTCATA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWHCFL*TQLDLI
Trigger: TATGAGATCAAGCTGAGTCAAGAGGAAGCAGTGCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGAACACTGAATTCTaGTCCTTCACATCACTAAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGENTEF*SFTSLS
Trigger: GCTTAGTGATGTGAAGGACAAGAATTCAGTGTTCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGTTCTGCCACTTTCTaGGCCTTAGTGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLCSATF*ALVISS
Trigger: TGAGGAAATCACTAAGGCCAAGAAAGTGGCAGAACA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTTTCCTCAATCCACTaGATGAGAGTTCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVSSIH*MRVPWQ
Trigger: CTGCCATGGAACTCTCATCAAGTGGATTGAGGAAAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTTTCCTCAATCCACTaGATGAGAGTTCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVSSIH*MRVPWQ
Trigger: CTGCCATGGAACTCTCATCAAGTGGATTGAGGAAAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTGTTCTTTCTTGGTaGTCAACTCTTCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLVLSW*STLLPE
Trigger: TTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGETCSF*VVNSSA
Trigger: GGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTCTGCAGAGTCTTTaGTTCCGTCTGCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFLQSL*FRLLSQ
Trigger: TTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTCTGCAGAGTCTTTaGTTCCGTCTGCTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFLQSL*FRLLSQ
Trigger: TTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLMAGVL*FLQSLL
Trigger: CAAAAGACTCTGCAGAAACAACAAGACACCTGCCAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLMAGV*LFLQSL
Trigger: AAGACTCTGCAGAAACAACAAGACACCTGCCATAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLMAGV*LFLQSL
Trigger: AAGACTCTGCAGAAACAACAAGACACCTGCCATAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGGAGAACCTCATATaGCTCCTTTGCCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILENLI*LLCLMK
Trigger: CTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGGAGAACCTCATATaGCTCCTTTGCCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLENLI*LLCLMK
Trigger: CTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAATTCCTTGTGGTCTaGCAGGAACTTCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKFLVV*QELLQF
Trigger: GAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGTTTTCAAATTCCTaGTGGTCTTGCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQFSNS*WSCRNF
Trigger: GAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATCTCAAGTCTCCTTaGTGGGAAATGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNLKSP*WEMTSS
Trigger: TGAGGATGTCATTTCCCACAAAGGAGACTTGAGATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTAACTGCTTTGTTGTaGCAAGCTGCTGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVTALL*QAAVAG
Trigger: TCCTGCAACAGCAGCTTGCAACAACAAAGCAGTTAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTAACTGCTTTGTTGTaGCAAGCTGCTGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVTALL*QAAVAG
Trigger: TCCTGCAACAGCAGCTTGCAACAACAAAGCAGTTAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTGTAACTGCTTTGTaGTTGCAAGCTGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPVTAL*LQAAVA
Trigger: TGCAACAGCAGCTTGCAACAACAAAGCAGTTACAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTTTCTACAGGTACTaGGTGTTCAGCCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLFYRY*VFSQFF
Trigger: GAAGAATTGGCTGAACACCAAGTACCTGTAGAAAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCATGAGCTGCTTTTaGAAGCTTTTCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVMSCF*KLFYRY
Trigger: GTACCTGTAGAAAAGCTTCAAAAAGCAGCTCATGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCTTCAGTTTCATGTaGTTGGCCAAGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICFSFM*LAKASW
Trigger: CCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTTCAGTTTCATGTaGTTGGCCAAGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCFSFM*LAKASW
Trigger: CCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFQAAL*SSNVLL
Trigger: AAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCAGCAGTCGGCTTTaGTTTTCCATGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASSRL*FSMNCC
Trigger: GCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTTTCTCTCTTTCTaGAACTGTCTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGIFLSF*NCLLQL
Trigger: GAGCTGCAGAAGACAGTTCAAGAAAGAGAGAAAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACTCACGAAAGTCTTaGCAGGAGGAACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHSRKS*QEEHSL
Trigger: AAGGGAATGTTCCTCCTGCAAAGACTTTCGTGAGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTATGGAACCTGTTTaGGCTTGGGAATCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSMEPV*AWESGA
Trigger: AGCTCCTGATTCCCAAGCCAAAACAGGTTCCATACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATCTCTGTAAGATCTTaGCAGGTGTGGTATCCGTTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGISVRS*QVWYPF
Trigger: AAACGGATACCACACCTGCAAAGATCTTACAGAGAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGFTVSV*VGDKVA
Trigger: TGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGGAATTGAGGTCCTCTaGCATTTTCTTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGGIEVL*HFLPVF
Trigger: GAAAACTGGAAGAAAATGCAAGAGGACCTCAATTCC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTTCCCATCGGGAATaGAGGTCCTCTTGCATTTTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFSHRE*RSSCIF
Trigger: GAAAATGCAAGAGGACCTCAATTCCCGATGGGAAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWAFNM*GSIDKG
Trigger: TCCCTTGTCTATTGACCCCAACATGTTGAATGCCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWAFNM*GSIDKG
Trigger: TCCCTTGTCTATTGACCCCAACATGTTGAATGCCCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATGCTTTGCAGATCTTaGTGTACTTGGCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHMLCRS*CTWLAD
Trigger: ATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAATAGCTTGGTCAATTaGGCTGGAACGGGAGTTGAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNSLVN*AGTGVE
Trigger: CTCAACTCCCGTTCCAGCCAAATTGACCAAGCTATT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATAGCTTGGTCAATTaGGCTGGAACGGGAGTTGAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINSLVN*AGTGVE
Trigger: CTCAACTCCCGTTCCAGCCAAATTGACCAAGCTATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGAGCAGGTCTTGGTATaGGGTACTTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGEQVLV*GTFNNS
Trigger: GCTATTGTTAAAAGTACCCAATACCAAGACCTGCTC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCCTGGAGCAGGTCTaGGTATTGGGTACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVLEQV*VLGTFN
Trigger: GTTAAAAGTACCCAATACCAAGACCTGCTCCAGGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTCCTGGAGCAGGTCTaGGTATTGGGTACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVLEQV*VLGTFN
Trigger: GTTAAAAGTACCCAATACCAAGACCTGCTCCAGGAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFFSSS*RYCSPM
Trigger: CATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFFSSS*RYCSPM
Trigger: CATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAGCCGTTCCAATTTaGCAGAAATTGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGAVPI*QKLGSF
Trigger: AAAACTGCCCAATTTCTGCAAAATTGGAACGGCTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCTGCATACAGTCCTaGAGCCTAGACTGTCGATTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFCIQS*SLDCRF
Trigger: AAATCGACAGTCTAGGCTCAAGGACTGTATGCAGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCTGCATACAGTCCTaGAGCCTAGACTGTCGATTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFCIQS*SLDCRF
Trigger: AAATCGACAGTCTAGGCTCAAGGACTGTATGCAGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCATCCATGTTCTGGTaGAGCCCAGCCTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASMFW*SPAFSS
Trigger: AGATGAGAAGGCTGGGCTCAACCAGAACATGGATGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGTCAAATCTGAGGGCTaGGATTTTGTTAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGVKSEG*DFVKEE
Trigger: CTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGAC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTGTGGCGGCATCATaGAGCGCTTTCAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAVAAS*SAFSFL
Trigger: TAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGAAGAGGATCCACTaGGTCTTTCTGAAACAGTTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLKRIH*VFLKQF
Trigger: AAACTGTTTCAGAAAGACCAAGTGGATCCTCTTCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTTCCAGCTGTTTTaGCCTGGCTGCTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIFQLF*PGCCLA
Trigger: AGCAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGCTGTCTCATGGAATaGTTTAGCCAGAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSCLME*FSQNQD
Trigger: ATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGTTCCTTCTGTCTTaGCTGAAACTGGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQFLLS*LKLGYL
Trigger: CAAATACCCCAGTTTCAGCAAAGACAGAAGGAACTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGTTCCTTCTGTCTTaGCTGAAACTGGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQFLLS*LKLGYL
Trigger: CAAATACCCCAGTTTCAGCAAAGACAGAAGGAACTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIVSLIS*YCSLAS
Trigger: TGATGCCAACGAGCAGTACAAACTGATCAGTGACAC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVSLIS*YCSLAS
Trigger: TGATGCCAACGAGCAGTACAAACTGATCAGTGACAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIMHSLI*STSAGI
Trigger: GATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACGGTGGCACTTTTATaGTCACTGATGCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITVALL*SLMHSL
Trigger: CAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACGGTGGCACTTTTATaGTCACTGATGCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTVALL*SLMHSL
Trigger: CAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTCCTGGATTTCTTTaGCAGCCAGATCCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCPGFL*QPDPCL
Trigger: CAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHASTCC*MMDGSI
Trigger: TATTGACCCATCCATCATCAAGCAACAGGTTGAAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTTGCCACCGTGGCTaGATGAGCCAAAACATCATT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICCHRG*MSQNII
Trigger: AATGATGTTTTGGCTCATCAAGCCACGGTGGCAACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTTGCCACCGTGGCTaGATGAGCCAAAACATCATT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCCHRG*MSQNII
Trigger: AATGATGTTTTGGCTCATCAAGCCACGGTGGCAACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAACTGGTTCCCTGTTaGATCCAGTTCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQLVPC*IQFNDL
Trigger: CAGATCATTGAACTGGATCAAACAGGGAACCAGTTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAACTGGTTCCCTGTTaGATCCAGTTCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQLVPC*IQFNDL
Trigger: CAGATCATTGAACTGGATCAAACAGGGAACCAGTTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTCATGGAATTGCTTaGCCCGCTTCCTGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLHGIA*PASWRH
Trigger: ATGACGCCAGGAAGCGGGCAAAGCAATTCCATGAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATTTTGTCTGGGTCATaGGAAATCTCCAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGILSGS*EISSSE
Trigger: CTCAGAACTGGAGATTTCCAATGACCCAGACAAAAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGACAGTATCCCATTaGTCTCTGACTTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQTVSH*SLTSPS
Trigger: GCTAGGAGAAGTCAGAGACAAATGGGATACTGTCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAACTGTGGCTCCACCTaGTACAACCAGTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNCGST*YNQSTK
Trigger: TTTAGTTGACTGGTTGTACAAGGTGGAGCCACAGTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAACTGTGGCTCCACCTaGTACAACCAGTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNCGST*YNQSTK
Trigger: TTTAGTTGACTGGTTGTACAAGGTGGAGCCACAGTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTTTCCCAGTTCTTTTaGGAAAACCTTATGGGCATC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSQFF*ENLMGI
Trigger: GATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSRLC*ETESLH
Trigger: GTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSRLC*ETESLH
Trigger: GTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGCTCAAGCCGGCTTaGCTTGGAAACAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLLKPA*LGNREF
Trigger: AAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGCTCAAGCCGGCTTaGCTTGGAAACAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLKPA*LGNREF
Trigger: AAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCGAAAGCGAAGTGTTaGTTCTGCTTCAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSKAKC*FCFRKP
Trigger: TGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMVIQC*MVVMQS
Trigger: CGACTGCATCACGACCATCAAGCACTGGATCACCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFLLYV*VTLSTS
Trigger: TGACGTGGACAGGGTCACCAAGACATATAAGAGGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTGTCATCTCTAACTaGGTGGTTGGGAACTTAGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHAVISN*VVGNLD
Trigger: ATCTAAGTTCCCAACCACCAAGTTAGAGATGACAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCACTTGGAATCTTTTaGCACACTTGCACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPLGIF*HTCTEP
Trigger: TGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCACTTGGAATCTTTTaGCACACTTGCACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPLGIF*HTCTEP
Trigger: TGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGATACCACTCTCTGTaGCTTTTTCCCAGGACCAAA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGYHSL*LFPRTK
Trigger: TTTGGTCCTGGGAAAAAGCAACAGAGAGTGGTATCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGATGGCTTCTTGTTCTTaGAGGAAAAGCTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGMASCS*RKSSLS
Trigger: TGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCAT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTTCTTGGCTTTGTTaGTGGCCATCCTTAACCAAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPSWLC*WPSLTK
Trigger: TTTGGTTAAGGATGGCCACAAACAAAGCCAAGAAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTTCTTGGCTTTGTTaGTGGCCATCCTTAACCAAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPSWLC*WPSLTK
Trigger: TTTGGTTAAGGATGGCCACAAACAAAGCCAAGAAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGTCCTTCTTGGCTTaGTTTGTGGCCATCCTTAAC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSFLA*FVAILN
Trigger: GTTAAGGATGGCCACAAACAAAGCCAAGAAGGACAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAACACTCTGTCCTTCTaGGCTTTGTTTGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNTLSF*ALFVAI
Trigger: GATGGCCACAAACAAAGCCAAGAAGGACAGAGTGTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAAGGCCTTGGGCTATaGCTTCATTTAGTAAGAGTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQGLGL*LHLVRV
Trigger: AACTCTTACTAAATGAAGCAATAGCCCAAGGCCTTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATTTCCCCATAAGTTaGACAGCAGTGTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNFPIS*TAVWLD
Trigger: GTCTAGCCACACTGCTGTCAAACTTATGGGGAAATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTTACCGAAAGCTTTTaGCCTCGTTTCAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVTESF*PRFRST
Trigger: TGTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGATCCTTGCTCTTTaGAAACCATTCTCCCTTGAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEILAL*KPFSLD
Trigger: GTCAAGGGAGAATGGTTTCAAAAGAGCAAGGATCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTGAGGGAAGCATCTTaGGATGTCATCTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVREAS*DVIWEG
Trigger: CCCTTCCCAGATGACATCCAAAGATGCTTCCCTCAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTGAGCAGGAACTTCTaGTGGCTGACTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSRNF*WLTDNN
Trigger: ATTGTTATCAGTCAGCCACAAGAAGTTCCTGCTCAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGAGCAGGAACTTCTaGTGGCTGACTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSRNF*WLTDNN
Trigger: ATTGTTATCAGTCAGCCACAAGAAGTTCCTGCTCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTTGAAGTTTGCCTaGCAGTTCCTTGTGCCGATT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHILKFA*QFLVPI
Trigger: AATCGGCACAAGGAACTGCAAGGCAAACTTCAAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCATATCCTTGTATGGTaGGAGAGTGTGACTCAGGCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHILVW*ESVTQA
Trigger: AGCCTGAGTCACACTCTCCAACCATACAAGGATATG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCATATCCTTGTATGGTaGGAGAGTGTGACTCAGGCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHILVW*ESVTQA
Trigger: AGCCTGAGTCACACTCTCCAACCATACAAGGATATG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTGGTGCACATCTGTaGCATGGTTTTCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPGAHL*HGFLFL
Trigger: AAGAAATAGAAAACCATGCAACAGATGTGCACCAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGACAATGGCTGTCCTaGACAGCTTTACTGTTTATC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGQWLS*TALLFI
Trigger: GATAAACAGTAAAGCTGTCAAGGACAGCCATTGTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGATCTGTTTTGGCTaGGGAATCAGGAGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKICFG*GIRSCD
Trigger: ATCACAGCTCCTGATTCCCAAGCCAAAACAGATCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134458.8
CDS TCA 90 bp GTATGTGGGGCATCATGTCAGGGATACAAACTGACCTTAAGTTATTaGCAAGATCTTTATCTAGGATACCACTCTCTGTTGCTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VCGASCQGYKLTLSY*QDLYLGYHSLLLFP
Trigger: GGGAAAAAGCAACAGAGAGTGGTATCCTAGATAAAGATCTTGTCAATAACTTAAGGTCAGTTTGTATCCCTGACATGATGCCCCACATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TCGCCATCCAGATTCAGTGTCAATCCTACATTTCTTTACCAATTCTaGGTAAGGAATAATCGTGCAGTTCTCAGGATCTATAACCCCATG +
Preference number: 5 (lower is better)
Translates to: SPSRFSVNPTFLYQF*VRNNRAVLRIYNPM
Trigger: CATGGGGTTATAGATCCTGAGAACTGCACGATTATTCCTTACTCAGAATTGGTAAAGAAATGTAGGATTGACACTGAATCTGGATGGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp TTCTCTGTGACAGATAAGAAGTCAGAAATAGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACCAAGATATCTTCCAGCTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: FSVTDKKSEIGSAVS*NCLARTKISSSCFC
Trigger: GCAAAAACAGCTGGAAGATATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCCTATTTCTGACTTCTTATCTGTCACAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 90 bp TACATCTCTGCATCAGGTCCAGCAAGCCAACTTTTTCAGCTGTATTaGGGTCTATTAAATTCTTGGATGATCTCAGGTGAGACTGTAATT +
Preference number: 5 (lower is better)
Translates to: YISASGPASQLFQLY*GLLNSWMISGETVI
Trigger: AATTACAGTCTCACCTGAGATCATCCAAGAATTTAATAGACCCCAATACAGCTGAAAAAGTTGGCTTGCTGGACCTGATGCAGAGATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGTGAATGTTTTCTTTaGCACTCGGTCCCGCTCATC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGECFL*HSVPLI
Trigger: GATGAGCGGGACCGAGTGCAAAAGAAAACATTCACC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGATCATTGATGTGCTaGCGGACCTTCATCAAGTGT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSLMC*RTFIKC
Trigger: ACACTTGATGAAGGTCCGCAAGCACATCAATGATCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGATCATTGATGTGCTaGCGGACCTTCATCAAGTGT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRSLMC*RTFIKC
Trigger: ACACTTGATGAAGGTCCGCAAGCACATCAATGATCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTGTGATGTCATCATaGCGGATATTCACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSVMSS*RIFTSF
Trigger: GAAGCTAGTGAATATCCGCAATGATGACATCACAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGAGTAGTTTCTCTTaGGCTGACATATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKSSFS*ADISPD
Trigger: ATCAGGGGATATGTCAGCCAAAGAGAAACTACTCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGACCCTCACACTCTaGAATGTACATAATGACATC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLETLTL*NVHNDI
Trigger: GATGTCATTATGTACATTCAAGAGTGTGAGGGTCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGACCCTCACACTCTaGAATGTACATAATGACATC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHETLTL*NVHNDI
Trigger: GATGTCATTATGTACATTCAAGAGTGTGAGGGTCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTATACAAATCGAAGATaGCCTTCGTCTTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGYTNRR*PSSSED
Trigger: ATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTACAACCTAGCCTCTTaGACACTTGAGCCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYNLAS*TLEPSS
Trigger: AGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTTGTA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTACAACCTAGCCTCTTaGACACTTGAGCCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYNLAS*TLEPSS
Trigger: AGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTTGTA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAACGAAATACATCTaGTTTCCCTTCCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRTKYI*FPFQFH
Trigger: ATGGAACTGGAAGGGAAACAAGATGTATTTCGTTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQVYFR*MESWRF
Trigger: AAACCTCCAAGACTCCATCAAACGAAAATATACCTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGAACAATGGTTTTaGATCTCCCAACAAGACTGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAEQWF*ISQQDW
Trigger: CCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGGAGATAAGGCTTTaGGTGTTAATGTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQEIRL*VLMCSW
Trigger: CCAGCTACACATTAACACCAAAAGCCTTATCTCCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGGAGATAAGGCTTTaGGTGTTAATGTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQEIRL*VLMCSW
Trigger: CCAGCTACACATTAACACCAAAAGCCTTATCTCCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAKVSS*SSFSSD
Trigger: ATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAKVSS*SSFSSD
Trigger: ATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCTGGAGACTGAATTaGTTTGAGCAGTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGWRLN*FEQSLL
Trigger: GAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGCTGGAGAAAGACGTaGCATTTCATAGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGCWRKT*HFIEIA
Trigger: TGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGAACACTGAATTCTaGTCCTTCACATCACTAAGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLENTEF*SFTSLS
Trigger: GCTTAGTGATGTGAAGGACAAGAATTCAGTGTTCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGAACACTGAATTCTaGTCCTTCACATCACTAAGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHENTEF*SFTSLS
Trigger: GCTTAGTGATGTGAAGGACAAGAATTCAGTGTTCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGTTCTGCCACTTTCTaGGCCTTAGTGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICSATF*ALVISS
Trigger: TGAGGAAATCACTAAGGCCAAGAAAGTGGCAGAACA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGTTCTGCCACTTTCTaGGCCTTAGTGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCSATF*ALVISS
Trigger: TGAGGAAATCACTAAGGCCAAGAAAGTGGCAGAACA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTGCTGGGAAAATTTTaGACATTGGTCCAACTTTGT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLLGKF*TLVQLC
Trigger: ACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTGTTCTTTCTTGGTaGTCAACTCTTCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLVLSW*STLLPE
Trigger: TTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTGTTCTTTCTTGGTaGTCAACTCTTCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLVLSW*STLLPE
Trigger: TTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLETCSF*VVNSSA
Trigger: GGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHETCSF*VVNSSA
Trigger: GGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAAGVG*QNHHKG
Trigger: ACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLELLE*VCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMAGVL*FLQSLL
Trigger: CAAAAGACTCTGCAGAAACAACAAGACACCTGCCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLMAGV*LFLQSL
Trigger: AAGACTCTGCAGAAACAACAAGACACCTGCCATAAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNILQVT*VLLQSR
Trigger: CCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAATTCCTTGTGGTCTaGCAGGAACTTCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKFLVV*QELLQF
Trigger: GAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAATTCCTTGTGGTCTaGCAGGAACTTCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKFLVV*QELLQF
Trigger: GAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAATCTCAAGTCTCCTTaGTGGGAAATGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNLKSP*WEMTSS
Trigger: TGAGGATGTCATTTCCCACAAAGGAGACTTGAGATT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATCTCAAGTCTCCTTaGTGGGAAATGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNLKSP*WEMTSS
Trigger: TGAGGATGTCATTTCCCACAAAGGAGACTTGAGATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTTTTCTACAGGTACTaGGTGTTCAGCCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLFYRY*VFSQFF
Trigger: GAAGAATTGGCTGAACACCAAGTACCTGTAGAAAAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTTTCTACAGGTACTaGGTGTTCAGCCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLFYRY*VFSQFF
Trigger: GAAGAATTGGCTGAACACCAAGTACCTGTAGAAAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCATGAGCTGCTTTTaGAAGCTTTTCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVMSCF*KLFYRY
Trigger: GTACCTGTAGAAAAGCTTCAAAAAGCAGCTCATGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTGAGACTGAGCAATaGCCTTCTGCAGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSETEQ*PSAAKQ
Trigger: CTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFQAAL*SSNVLL
Trigger: AAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFQAAL*SSNVLL
Trigger: AAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAACTGCTGCAGCTTGTaGGAGAGCTGCTCAAACATC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNCCSL*ESCSNI
Trigger: GATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGAACTGCTGCAGCTaGTTGGAGAGCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMNCCS*LESCSN
Trigger: GTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTTCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTTTCTCTCTTTCTaGAACTGTCTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIFLSF*NCLLQL
Trigger: GAGCTGCAGAAGACAGTTCAAGAAAGAGAGAAAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATATCTTTCTCTCTTTCTaGAACTGTCTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHIFLSF*NCLLQL
Trigger: GAGCTGCAGAAGACAGTTCAAGAAAGAGAGAAAGAT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCTCTGTAAGATCTTaGCAGGTGTGGTATCCGTTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLISVRS*QVWYPF
Trigger: AAACGGATACCACACCTGCAAAGATCTTACAGAGAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFTVSV*VGDKVA
Trigger: TGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGGAATTGAGGTCCTCTaGCATTTTCTTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHGIEVL*HFLPVF
Trigger: GAAAACTGGAAGAAAATGCAAGAGGACCTCAATTCC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGGAATTGAGGTCCTCTaGCATTTTCTTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLGIEVL*HFLPVF
Trigger: GAAAACTGGAAGAAAATGCAAGAGGACCTCAATTCC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTTCCCATCGGGAATaGAGGTCCTCTTGCATTTTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFSHRE*RSSCIF
Trigger: GAAAATGCAAGAGGACCTCAATTCCCGATGGGAAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGCTTTGCAGATCTTaGTGTACTTGGCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMLCRS*CTWLAD
Trigger: ATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATGCTTTGCAGATCTTaGTGTACTTGGCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIMLCRS*CTWLAD
Trigger: ATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGACTTTTAACAATAGCTaGGTCAATTTGGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGTFNNS*VNLAGT
Trigger: CGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAGT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGAGCAGGTCTTGGTATaGGGTACTTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLEQVLV*GTFNNS
Trigger: GCTATTGTTAAAAGTACCCAATACCAAGACCTGCTC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGAGCAGGTCTTGGTATaGGGTACTTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHEQVLV*GTFNNS
Trigger: GCTATTGTTAAAAGTACCCAATACCAAGACCTGCTC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCCTCCTTAATCTCATaGTCTAATTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGASLIS*SNCPKS
Trigger: TGATTTGGGACAATTAGACAATGAGATTAAGGAGGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAGCCGTTCCAATTTaGCAGAAATTGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGAVPI*QKLGSF
Trigger: AAAACTGCCCAATTTCTGCAAAATTGGAACGGCTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAGCCGTTCCAATTTaGCAGAAATTGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGAVPI*QKLGSF
Trigger: AAAACTGCCCAATTTCTGCAAAATTGGAACGGCTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCTGCATACAGTCCTaGAGCCTAGACTGTCGATTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFCIQS*SLDCRF
Trigger: AAATCGACAGTCTAGGCTCAAGGACTGTATGCAGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTGTTACTACAGGCTaGAGAGCCCAGGGCATCAAA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLVTTG*RAQGIK
Trigger: TTTGATGCCCTGGGCTCTCAAGCCTGTAGTAACAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLRAWI*LRKSRT
Trigger: CGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGTCAAATCTGAGGGCTaGGATTTTGTTAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLVKSEG*DFVKEE
Trigger: CTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGAC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTCAAATCTGAGGGCTaGGATTTTGTTAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVKSEG*DFVKEE
Trigger: CTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGAGCCTCCTGCAGTaGTGCAATTCTTTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQSLLQ*CNSLCN
Trigger: GTTGCACAAAGAATTGCACAACTGCAGGAGGCTCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGCTGTCTCATGGAATaGTTTAGCCAGAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSCLME*FSQNQD
Trigger: ATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGCTGTCTCATGGAATaGTTTAGCCAGAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSCLME*FSQNQD
Trigger: ATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAAGTTCTGAGGGCCTaGGAGCTAGTGAGAGTGATG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKVLRA*ELVRVM
Trigger: CATCACTCTCACTAGCTCCAAGGCCCTCAGAACTTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGTTCCTTCTGTCTTaGCTGAAACTGGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQFLLS*LKLGYL
Trigger: CAAATACCCCAGTTTCAGCAAAGACAGAAGGAACTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAATTTCATCTACCCTTaGTCCAACAGTGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGNFIYP*SNSVTD
Trigger: ATCAGTGACACTGTTGGACAAAGGGTAGATGAAATT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTGTTCTAGACGAATaGGACCGAGAGCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLVLDE*DREPSA
Trigger: AGCTGATGGCTCTCGGTCCAATTCGTCTAGAACAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTCAGACCGTGCTTaGATGTCCTCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSDRA*MSSQKN
Trigger: GTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATATCCTGGGTGTCTTaGATGGTGGTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNISWVS*MVVRRA
Trigger: AGCTCTCCTGACCACCATCAAAGACACCCAGGATAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASTCC*MMDGSI
Trigger: TATTGACCCATCCATCATCAAGCAACAGGTTGAAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSASTCC*MMDGSI
Trigger: TATTGACCCATCCATCATCAAGCAACAGGTTGAAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGMVQS*ITVLSS
Trigger: GCTAGATAACACTGTGATCAAGCTCTGCACCATGCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFSQRC*SSVSGS
Trigger: AGAACCACTGACAGAACTCAAGCACCTCTGGGAGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGGCCTCTTCAAGCTTaGACTTTCTCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGPLQA*TFSLPP
Trigger: AGGTGGAAGAGAGAAAGTCAAAGCTTGAAGAGGCCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAACTGGTTCCCTGTTaGATCCAGTTCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQLVPC*IQFNDL
Trigger: CAGATCATTGAACTGGATCAAACAGGGAACCAGTTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTTTGTCTGGGTCATaGGAAATCTCCAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLILSGS*EISSSE
Trigger: CTCAGAACTGGAGATTTCCAATGACCCAGACAAAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTCGCTCTACAGACTaGCCACAGACAGTATCCCAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCRSTD*PQTVSH
Trigger: ATGGGATACTGTCTGTGGCAAGTCTGTAGAGCGACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAGGCTTCTTCCAACTaGTGCTGTCGCTCTACAGAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKASSN*CCRSTD
Trigger: GTCTGTAGAGCGACAGCACAAGTTGGAAGAAGCCTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAACTGTGGCTCCACCTaGTACAACCAGTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINCGST*YNQSTK
Trigger: TTTAGTTGACTGGTTGTACAAGGTGGAGCCACAGTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAACTGTGGCTCCACCTaGTACAACCAGTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNCGST*YNQSTK
Trigger: TTTAGTTGACTGGTTGTACAAGGTGGAGCCACAGTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTTTCCCAGTTCTTTTaGGAAAACCTTATGGGCATC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLSQFF*ENLMGI
Trigger: GATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCGAAAGCGAAGTGTTaGTTCTGCTTCAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSKAKC*FCFRKP
Trigger: TGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCGAAAGCGAAGTGTTaGTTCTGCTTCAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISKAKC*FCFRKP
Trigger: TGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCACGTCAGGTTGTTaGCGTGTCATCTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSTSGC*RVISSI
Trigger: TATGGAGGAGATGACACGCAAACAACCTGACGTGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTGTCATCTCTAACTaGGTGGTTGGGAACTTAGAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAVISN*VVGNLD
Trigger: ATCTAAGTTCCCAACCACCAAGTTAGAGATGACAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTGTCATCTCTAACTaGGTGGTTGGGAACTTAGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAVISN*VVGNLD
Trigger: ATCTAAGTTCCCAACCACCAAGTTAGAGATGACAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCAGCTACTAGATTATaGGTCACTGCCTCATCAATA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLAATRL*VTASSI
Trigger: TATTGATGAGGCAGTGACCAATAATCTAGTAGCTGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGACCTTTCACCTTTaGCTTCAGTACAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQTFHL*LQYSFP
Trigger: AGGAAAACTGTACTGAAGCAAAAGGTGAAAGGTCTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGACCTTTCACCTTTaGCTTCAGTACAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQTFHL*LQYSFP
Trigger: AGGAAAACTGTACTGAAGCAAAAGGTGAAAGGTCTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCACTTGGAATGTCTTaGATGGTCTTCACTTGTTCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSLGMS*MVFTCS
Trigger: AGAACAAGTGAAGACCATCAAAGACATTCCAAGTGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAATTTCCCCATAAGTTaGACAGCAGTGTGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSNFPIS*TAVWLD
Trigger: GTCTAGCCACACTGCTGTCAAACTTATGGGGAAATT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGTAGCCTTTTCCAGATaGATAAGTTCTGTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHVAFSR*ISSVWS
Trigger: TGACCAGACAGAACTTATCAATCTGGAAAAGGCTAC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGGCTAAGGATTCTTCTTaGTTAGTTTTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGAKDSS*LVFAKV
Trigger: GACCTTGGCAAAAACTAACAAAGAAGAATCCTTAGC...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGATCCTTGCTCTTTaGAAACCATTCTCCCTTGAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSEILAL*KPFSLD
Trigger: GTCAAGGGAGAATGGTTTCAAAAGAGCAAGGATCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCAGTCTTTCTGGTCTaGGGATCTCAGAAGATAATG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSVFLV*GSQKIM
Trigger: CATTATCTTCTGAGATCCCAAGACCAGAAAGACTGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAGCAGGAACTTCTaGTGGCTGACTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSRNF*WLTDNN
Trigger: ATTGTTATCAGTCAGCCACAAGAAGTTCCTGCTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTTGAAGTTTGCCTaGCAGTTCCTTGTGCCGATT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSILKFA*QFLVPI
Trigger: AATCGGCACAAGGAACTGCAAGGCAAACTTCAAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCTTTCAGCCATAGATaGTTTCATATCCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPFSHR*FHILVW
Trigger: CCATACAAGGATATGAAACAATCTATGGCTGAAAGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp TTCTTTGTGACATGTAAACGAACACTTTGTGGGAGTTTGGCATTTTaGCTTCTCAGTAGAAAGGTCTTTACCTTCAGATTCCTCAGGACA +
Preference number: 5 (lower is better)
Translates to: FFVTCKRTLCGSLAF*LLSRKVFTFRFLRT
Trigger: TGTCCTGAGGAATCTGAAGGTAAAGACCTTTCTACTGAGAAGTCAAAATGCCAAACTCCCACAAAGTGTTCGTTTACATGTCACAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 90 bp CCAGTTTCACTTGGAATGTCTTTGATGGTCTTCACTTGTTCTTTGTaGCATGTAAACGAACACTTTGTGGGAGTTTGGCATTTTGACTTC +
Preference number: 5 (lower is better)
Translates to: PVSLGMSLMVFTCSL*HVNEHFVGVWHFDF
Trigger: GAAGTCAAAATGCCAAACTCCCACAAAGTGTTCGTTTACATGTCACAAAGAACAAGTGAAGACCATCAAAGACATTCCAAGTGAAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp CTAGCAGTCTCAGGAAGTCCTCCTGTAGGTTTAGATGCAGAAAGTTaGTTCTCCATTCTATTGAGTTCTAAGAGGAAATCTTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: LAVSGSPPVGLDAES*FSILLSSKRKSSIS
Trigger: TGAAATTGAAGATTTCCTCTTAGAACTCAATAGAATGGAGAACCAACTTTCTGCATCTAAACCTACAGGAGGACTTCCTGAGACTGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTGTGATGTCATCATaGCGGATATTCACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSVMSS*RIFTSF
Trigger: GAAGCTAGTGAATATCCGCAATGATGACATCACAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCTGTGATGTCATCATaGCGGATATTCACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISVMSS*RIFTSF
Trigger: GAAGCTAGTGAATATCCGCAATGATGACATCACAGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCGTTAGCTTGGGATaGCCATCTGTGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSVSLG*PSVMSS
Trigger: TGATGACATCACAGATGGCAATCCCAAGCTAACGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGAGTAGTTTCTCTTaGGCTGACATATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKSSFS*ADISPD
Trigger: ATCAGGGGATATGTCAGCCAAAGAGAAACTACTCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAAGAGTAGTTTCTCTTaGGCTGACATATCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSKSSFS*ADISPD
Trigger: ATCAGGGGATATGTCAGCCAAAGAGAAACTACTCTT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGCAGGAAGAAAAGTaGGTGCATTTGACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQQEEK*VHLTPV
Trigger: CACAGGAGTCAAATGCACCAACTTTTCTTCCTGCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGTTACTCTGCACTaGTACTCTCTCCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPVTLH*YSLHVY
Trigger: GTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTATACAAATCGAAGATaGCCTTCGTCTTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLYTNRR*PSSSED
Trigger: ATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCCTTCCAGTTCCATaGTCAACTCAGAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLPVP*STQRSR
Trigger: CCTACTTCTCTGAGTTGACAATGGAACTGGAAGGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGAACGAAATACATCTaGTTTCCCTTCCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRTKYI*FPFQFH
Trigger: ATGGAACTGGAAGGGAAACAAGATGTATTTCGTTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAGAACGAAATACATCTaGTTTCCCTTCCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHRTKYI*FPFQFH
Trigger: ATGGAACTGGAAGGGAAACAAGATGTATTTCGTTCT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATATGCCTCTACTGTTaGCTTAGCTGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNICLYC*LSWVVL
Trigger: GAGAACCACCCAGCTAAGCAAACAGTAGAGGCATAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQVYFR*MESWRF
Trigger: AAACCTCCAAGACTCCATCAAACGAAAATATACCTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGAGAACACTGAATTCTaGTCCTTCACATCACTAAGC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSENTEF*SFTSLS
Trigger: GCTTAGTGATGTGAAGGACAAGAATTCAGTGTTCTC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTTTCCTCAATCCACTaGATGAGAGTTCCATGGCAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVSSIH*MRVPWQ
Trigger: CTGCCATGGAACTCTCATCAAGTGGATTGAGGAAAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTGCTGGGAAAATTTTaGACATTGGTCCAACTTTGT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLLGKF*TLVQLC
Trigger: ACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIETCSF*VVNSSA
Trigger: GGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAATGGCCTCAGAAACTaGTTCTTTCTTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNGLRN*FFLGCQ
Trigger: TTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGTTTTCAAATTCCTaGTGGTCTTGCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQFSNS*WSCRNF
Trigger: GAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGTTTTCAAATTCCTaGTGGTCTTGCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQFSNS*WSCRNF
Trigger: GAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGCCTTCCTCAAAATaGTTTTCTGTTTCTAAGACT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWPSSK*FSVSKT
Trigger: AGTCTTAGAAACAGAAAACAATTTTGAGGAAGGCCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGTGTATCTTTCTGTaGCATCCTTCAGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWCIFL*HPSVFH
Trigger: ATGAAAAACTGAAGGATGCAACAGAAAGATACACCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTGTAACTGCTTTGTaGTTGCAAGCTGCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPVTAL*LQAAVA
Trigger: TGCAACAGCAGCTTGCAACAACAAAGCAGTTACAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTTTCTACAGGTACTaGGTGTTCAGCCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILFYRY*VFSQFF
Trigger: GAAGAATTGGCTGAACACCAAGTACCTGTAGAAAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCATGAGCTGCTTTTaGAAGCTTTTCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVMSCF*KLFYRY
Trigger: GTACCTGTAGAAAAGCTTCAAAAAGCAGCTCATGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCTTCAGTTTCATGTaGTTGGCCAAGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCFSFM*LAKASW
Trigger: CCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLSSNV*LQFHVV
Trigger: AACAACATGAAACTGAAGCAAGACATTGCTAGACAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFQAAL*SSNVLL
Trigger: AAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFQAAL*SSNVLL
Trigger: AAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTTTCTCTCTTTCTaGAACTGTCTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIFLSF*NCLLQL
Trigger: GAGCTGCAGAAGACAGTTCAAGAAAGAGAGAAAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTTTCTCTCTTTCTaGAACTGTCTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIIFLSF*NCLLQL
Trigger: GAGCTGCAGAAGACAGTTCAAGAAAGAGAGAAAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACTCACGAAAGTCTTaGCAGGAGGAACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHSRKS*QEEHSL
Trigger: AAGGGAATGTTCCTCCTGCAAAGACTTTCGTGAGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGTATGGAACCTGTTTaGGCTTGGGAATCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSMEPV*AWESGA
Trigger: AGCTCCTGATTCCCAAGCCAAAACAGGTTCCATACT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATCTCTGTAAGATCTTaGCAGGTGTGGTATCCGTTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSISVRS*QVWYPF
Trigger: AAACGGATACCACACCTGCAAAGATCTTACAGAGAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATCTCTGTAAGATCTTaGCAGGTGTGGTATCCGTTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIISVRS*QVWYPF
Trigger: AAACGGATACCACACCTGCAAAGATCTTACAGAGAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFTVSV*VGDKVA
Trigger: TGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFTVSV*VGDKVA
Trigger: TGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGGAATTGAGGTCCTCTaGCATTTTCTTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIGIEVL*HFLPVF
Trigger: GAAAACTGGAAGAAAATGCAAGAGGACCTCAATTCC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGGAATTGAGGTCCTCTaGCATTTTCTTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSGIEVL*HFLPVF
Trigger: GAAAACTGGAAGAAAATGCAAGAGGACCTCAATTCC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAATAGCTTGGTCAATTaGGCTGGAACGGGAGTTGAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNSLVN*AGTGVE
Trigger: CTCAACTCCCGTTCCAGCCAAATTGACCAAGCTATT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATACTTTTAACAATAGCTaGGTCAATTTGGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHTFNNS*VNLAGT
Trigger: CGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAGT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGACTTTTAACAATAGCTaGGTCAATTTGGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLTFNNS*VNLAGT
Trigger: CGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAGT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGAGCAGGTCTTGGTATaGGGTACTTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIEQVLV*GTFNNS
Trigger: GCTATTGTTAAAAGTACCCAATACCAAGACCTGCTC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCCTGGAGCAGGTCTaGGTATTGGGTACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVLEQV*VLGTFN
Trigger: GTTAAAAGTACCCAATACCAAGACCTGCTCCAGGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCCTCCTTAATCTCATaGTCTAATTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHASLIS*SNCPKS
Trigger: TGATTTGGGACAATTAGACAATGAGATTAAGGAGGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTTCAAGCTGGTGTTaGGCTCCTTCAACTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLISSWC*APSTFF
Trigger: AAAGAAAGTTGAAGGAGCCAAACACCAGCTTGAAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGTCAAATCTGAGGGCTaGGATTTTGTTAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSVKSEG*DFVKEE
Trigger: CTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGAC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGAAGAGGATCCACTaGGTCTTTCTGAAACAGTTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLKRIH*VFLKQF
Trigger: AAACTGTTTCAGAAAGACCAAGTGGATCCTCTTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGAAGAGGATCCACTaGGTCTTTCTGAAACAGTTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILKRIH*VFLKQF
Trigger: AAACTGTTTCAGAAAGACCAAGTGGATCCTCTTCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCAGTTGTGCAATTCTTaGTGCAACCTTTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGQLCNS*CNLFIQ
Trigger: CTGAATAAAAAGGTTGCACAAAGAATTGCACAACTG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGCAACTTCTGTTCTaGGATCTGTGCTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEQLLF*DLCFHH
Trigger: GTGGTGAAAGCACAGATCCAAGAACAGAAGTTGCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGCTGTCTCATGGAATaGTTTAGCCAGAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISCLME*FSQNQD
Trigger: ATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAATTTCATCTACCCTTaGTCCAACAGTGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHNFIYP*SNSVTD
Trigger: ATCAGTGACACTGTTGGACAAAGGGTAGATGAAATT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAATTTCATCTACCCTTaGTCCAACAGTGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLNFIYP*SNSVTD
Trigger: ATCAGTGACACTGTTGGACAAAGGGTAGATGAAATT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTCATCCATTGAATCTTaGTGTCGAATGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGSSIES*CRMMSM
Trigger: CATTGACATCATTCGACACAAAGATTCAATGGATGA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCACCTCATCTTTTATTaGGGCATACATGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHHLIFY*GIHVFC
Trigger: GCAGAAAACATGTATGCCCAAATAAAAGATGAGGTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMHSLI*STSAGI
Trigger: GATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACGGTGGCACTTTTATaGTCACTGATGCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTVALL*SLMHSL
Trigger: CAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTTGCCACCGTGGCTaGATGAGCCAAAACATCATT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCCHRG*MSQNII
Trigger: AATGATGTTTTGGCTCATCAAGCCACGGTGGCAACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGWFSIL*SSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCCAGTTGATAAATTCTaGCAAGGAATTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGPVDKF*QGILEF
Trigger: GAATTCCAGAATTCCTTGCAAGAATTTATCAACTGG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGGCTAGAGTAAGCCAGTaGATAAATTCTTGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLARVSQ*INSCKE
Trigger: TTCCTTGCAAGAATTTATCAACTGGCTTACTCTAGC...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATGCTAGAGTAAGCCAGTaGATAAATTCTTGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHARVSQ*INSCKE
Trigger: TTCCTTGCAAGAATTTATCAACTGGCTTACTCTAGC...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCATTAGCAAAAACCTaGTGCTCTTCTATCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLAKT*CSSIWE
Trigger: TTCCCAGATAGAAGAGCACAAGGTTTTTGCTAATGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCATTAGCAAAAACCTaGTGCTCTTCTATCTGGGAA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSLAKT*CSSIWE
Trigger: TTCCCAGATAGAAGAGCACAAGGTTTTTGCTAATGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGCTAACCAACAAATTCTaGATCAAGACAACATCCTGT +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLTNKF*IKTTSC
Trigger: ACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAG...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATTTTGTCTGGGTCATaGGAAATCTCCAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIILSGS*EISSSE
Trigger: CTCAGAACTGGAGATTTCCAATGACCCAGACAAAAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTTTCCCAGTTCTTTTaGGAAAACCTTATGGGCATC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSQFF*ENLMGI
Trigger: GATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSRLC*ETESLH
Trigger: GTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGCTCAAGCCGGCTTaGCTTGGAAACAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLKPA*LGNREF
Trigger: AAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTTATCTGCATCAGTaGTTGGCCGATAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSYLHQ*LADRHP
Trigger: AGGATGCCTATCGGCCAACAACTGATGCAGATAAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCACTTGGAATCTTTTaGCACACTTGCACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPLGIF*HTCTEP
Trigger: TGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGTTATTTTCTTTTCAATaGCTTCCACCACAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGLFSFQ*LPPQKG
Trigger: CCCTTTCTGTGGTGGAAGCAATTGAAAAGAAAATAA...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCAGCTACTAGATTATaGGTCACTGCCTCATCAATA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIAATRL*VTASSI
Trigger: TATTGATGAGGCAGTGACCAATAATCTAGTAGCTGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGATACCACTCTCTGTaGCTTTTTCCCAGGACCAAA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGYHSL*LFPRTK
Trigger: TTTGGTCCTGGGAAAAAGCAACAGAGAGTGGTATCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATGGCTTCTTGTTCTTaGAGGAAAAGCTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSMASCS*RKSSLS
Trigger: TGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCACTTGGAATGTCTTaGATGGTCTTCACTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSLGMS*MVFTCS
Trigger: AGAACAAGTGAAGACCATCAAAGACATTCCAAGTGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGGAAAGGGCTTCCTTaGTTTGAGGATGGAAAAATT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRKGLP*FEDGKI
Trigger: AATTTTTCCATCCTCAAACAAAGGAAGCCCTTTCCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAAAGTCCTGGATCTCTaGGATTTCTCTTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLKVLDL*DFSFQV
Trigger: GACTTGAAAAGAGAAATCCAAGAGATCCAGGACTTT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAAGTCCTGGATCTCTaGGATTTCTCTTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKVLDL*DFSFQV
Trigger: GACTTGAAAAGAGAAATCCAAGAGATCCAGGACTTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAATATACACCCAATGTATGGAGCAGGATTCAAAGTGGATAGTGGTGTGGGGAGAGGTTTACAGTTTTaGTTTCCCCTTCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: INIHPMYGAGFKVDSGVGRGLQF*FPLQYR
Trigger: TCTATACTGAAGGGGAAACAAAAACTGTAAACCTCT...CCCCACACCACTATCCACTTTGAATCCTGCTCCATACATTGGGTGTATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTCTCCACTTCCTTTaGAACCGAACCCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPLHFL*NRTLFL
Trigger: TAAGAAGAGGGTTCGGTTCAAAAGGAAGTGGAGAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS GCA 90 bp CAGGACCAAATCTCTGTGAGTGTTGGTAGAAAAAGAGCCTCAATTTaGTGTCGGTTATGGAGAATTTTATGTGCTAATTCAGTAGATACA +
Preference number: 5 (lower is better)
Translates to: QDQISVSVGRKRASI*CRLWRILCANSVDT
Trigger: TGTATCTACTGAATTAGCACATAAAATTCTCCATAACCGACAGCAAATTGAGGCTCTTTTTCTACCAACACTCACAGAGATTTGGTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 90 bp CTTGGTATGAAGATTCACCCTCAAAACCAAAAGGACTTAAGATGCTaGCAGATACTTTATTATCTGAAGAAGCTTTCTCATCTTGACGCT +
Preference number: 5 (lower is better)
Translates to: LGMKIHPQNQKDLRC*QILYYLKKLSHLDA
Trigger: AGCGTCAAGATGAGAAAGCTTCTTCAGATAATAAAGTATCTGCCAGCATCTTAAGTCCTTTTGGTTTTGAGGGTGAATCTTCATACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTATACAAATCGAAGATaGCCTTCGTCTTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIYTNRR*PSSSED
Trigger: ATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTATACAAATCGAAGATaGCCTTCGTCTTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSYTNRR*PSSSED
Trigger: ATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAACGAAATACATCTaGTTTCCCTTCCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRTKYI*FPFQFH
Trigger: ATGGAACTGGAAGGGAAACAAGATGTATTTCGTTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAGAACGAAATACATCTaGTTTCCCTTCCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIRTKYI*FPFQFH
Trigger: ATGGAACTGGAAGGGAAACAAGATGTATTTCGTTCT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIQVYFR*MESWRF
Trigger: AAACCTCCAAGACTCCATCAAACGAAAATATACCTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSQVYFR*MESWRF
Trigger: AAACCTCCAAGACTCCATCAAACGAAAATATACCTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTGAACAATGGTTTTaGATCTCCCAACAAGACTGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAEQWF*ISQQDW
Trigger: CCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGGAGATAAGGCTTTaGGTGTTAATGTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQEIRL*VLMCSW
Trigger: CCAGCTACACATTAACACCAAAAGCCTTATCTCCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAKVSS*SSFSSD
Trigger: ATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGCTGGAGAAAGACGTaGCATTTCATAGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSCWRKT*HFIEIA
Trigger: TGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGCTGGAGAAAGACGTaGCATTTCATAGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFICWRKT*HFIEIA
Trigger: TGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGTTCTGCCACTTTCTaGGCCTTAGTGATTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCSATF*ALVISS
Trigger: TGAGGAAATCACTAAGGCCAAGAAAGTGGCAGAACA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTGCTGGGAAAATTTTaGACATTGGTCCAACTTTGT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILLGKF*TLVQLC
Trigger: ACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATGGCCTCAGAAACTaGTTCTTTCTTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINGLRN*FFLGCQ
Trigger: TTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMAGVL*FLQSLL
Trigger: CAAAAGACTCTGCAGAAACAACAAGACACCTGCCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLMAGV*LFLQSL
Trigger: AAGACTCTGCAGAAACAACAAGACACCTGCCATAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAATTCCTTGTGGTCTaGCAGGAACTTCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKFLVV*QELLQF
Trigger: GAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGCCTTCCTCAAAATaGTTTTCTGTTTCTAAGACT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWPSSK*FSVSKT
Trigger: AGTCTTAGAAACAGAAAACAATTTTGAGGAAGGCCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGTGTATCTTTCTGTaGCATCCTTCAGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWCIFL*HPSVFH
Trigger: ATGAAAAACTGAAGGATGCAACAGAAAGATACACCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGAATCTGTAGTTTCTaGAATAGGCCTACAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGICSF*NRPTVQ
Trigger: CTGGACTGTAGGCCTATTCAAGAAACTACAGATTCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLSSNV*LQFHVV
Trigger: AACAACATGAAACTGAAGCAAGACATTGCTAGACAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTTCCCATCGGGAATaGAGGTCCTCTTGCATTTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFSHRE*RSSCIF
Trigger: GAAAATGCAAGAGGACCTCAATTCCCGATGGGAAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATGCTTTGCAGATCTTaGTGTACTTGGCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNMLCRS*CTWLAD
Trigger: ATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACTTTTAACAATAGCTaGGTCAATTTGGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTFNNS*VNLAGT
Trigger: CGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTACTTTTAACAATAGCTaGGTCAATTTGGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFITFNNS*VNLAGT
Trigger: CGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAGT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCCTCCTTAATCTCATaGTCTAATTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIASLIS*SNCPKS
Trigger: TGATTTGGGACAATTAGACAATGAGATTAAGGAGGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGAGCCGTTCCAATTTaGCAGAAATTGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGAVPI*QKLGSF
Trigger: AAAACTGCCCAATTTCTGCAAAATTGGAACGGCTCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCTGCATACAGTCCTaGAGCCTAGACTGTCGATTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFCIQS*SLDCRF
Trigger: AAATCGACAGTCTAGGCTCAAGGACTGTATGCAGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTCTATTTCTGAAGAATaGATCAGAATGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLSISEE*IRMSAA
Trigger: TGCTGCTGACATTCTGATCAATTCTTCAGAAATAGA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTCTATTTCTGAAGAATaGATCAGAATGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHSISEE*IRMSAA
Trigger: TGCTGCTGACATTCTGATCAATTCTTCAGAAATAGA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTATTTCAAGCTGGTGTTaGGCTCCTTCAACTTTCTTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIISSWC*APSTFF
Trigger: AAAGAAAGTTGAAGGAGCCAAACACCAGCTTGAAAT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATTTCAAGCTGGTGTTaGGCTCCTTCAACTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSISSWC*APSTFF
Trigger: AAAGAAAGTTGAAGGAGCCAAACACCAGCTTGAAAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCAGTTGTGCAATTCTTaGTGCAACCTTTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLQLCNS*CNLFIQ
Trigger: CTGAATAAAAAGGTTGCACAAAGAATTGCACAACTG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCAGTTGTGCAATTCTTaGTGCAACCTTTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHQLCNS*CNLFIQ
Trigger: CTGAATAAAAAGGTTGCACAAAGAATTGCACAACTG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGTTCCTTCTGTCTTaGCTGAAACTGGGGTATTTG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQFLLS*LKLGYL
Trigger: CAAATACCCCAGTTTCAGCAAAGACAGAAGGAACTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAATTTCATCTACCCTTaGTCCAACAGTGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFINFIYP*SNSVTD
Trigger: ATCAGTGACACTGTTGGACAAAGGGTAGATGAAATT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCACCTCATCTTTTATTaGGGCATACATGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIHLIFY*GIHVFC
Trigger: GCAGAAAACATGTATGCCCAAATAAAAGATGAGGTG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCACCTCATCTTTTATTaGGGCATACATGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSHLIFY*GIHVFC
Trigger: GCAGAAAACATGTATGCCCAAATAAAAGATGAGGTG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASTCC*MMDGSI
Trigger: TATTGACCCATCCATCATCAAGCAACAGGTTGAAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLWFSIL*SSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHWFSIL*SSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATTTTAGATGCAGAAAGTaGGTTCTCCATTCTATTGAG +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHFRCRK*VLHSIE
Trigger: CTCAATAGAATGGAGAACCAACTTTCTGCATCTAAA...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTTAGATGCAGAAAGTaGGTTCTCCATTCTATTGAG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFRCRK*VLHSIE
Trigger: CTCAATAGAATGGAGAACCAACTTTCTGCATCTAAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCCAGTTGATAAATTCTaGCAAGGAATTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLPVDKF*QGILEF
Trigger: GAATTCCAGAATTCCTTGCAAGAATTTATCAACTGG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCCAGTTGATAAATTCTaGCAAGGAATTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHPVDKF*QGILEF
Trigger: GAATTCCAGAATTCCTTGCAAGAATTTATCAACTGG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTGCTAGAGTAAGCCAGTaGATAAATTCTTGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIARVSQ*INSCKE
Trigger: TTCCTTGCAAGAATTTATCAACTGGCTTACTCTAGC...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATTAGCAAAAACCTaGTGCTCTTCTATCTGGGAA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSLAKT*CSSIWE
Trigger: TTCCCAGATAGAAGAGCACAAGGTTTTTGCTAATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAACTGGTTCCCTGTTaGATCCAGTTCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQLVPC*IQFNDL
Trigger: CAGATCATTGAACTGGATCAAACAGGGAACCAGTTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGCTAACCAACAAATTCTaGATCAAGACAACATCCTGT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLTNKF*IKTTSC
Trigger: ACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAG...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATCTAACCAACAAATTCTaGATCAAGACAACATCCTGT +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHLTNKF*IKTTSC
Trigger: ACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAG...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAACTGTGGCTCCACCTaGTACAACCAGTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNCGST*YNQSTK
Trigger: TTTAGTTGACTGGTTGTACAAGGTGGAGCCACAGTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCGAAAGCGAAGTGTTaGTTCTGCTTCAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSKAKC*FCFRKP
Trigger: TGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTATTTTCTTTTCAATaGCTTCCACCACAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLLFSFQ*LPPQKG
Trigger: CCCTTTCTGTGGTGGAAGCAATTGAAAAGAAAATAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGTTCAATAATGGCTTCTaGTTCTTTGAGGAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLFNNGF*FFEEKL
Trigger: GAGCTTTTCCTCAAAGAACAAGAAGCCATTATTGAA...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp TCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATCGACCATAAGGGCTTCCTTTGTTaGAGGATGGAAAAATTGATA +
Preference number: 5 (lower is better)
Translates to: SNWAYGIHSSVYGRLIDHKGFLC*RMEKLI
Trigger: TATCAATTTTTCCATCCTCAAACAAAGGAAGCCCTT...ATGGTCGATCAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTGCTAAGGATTCTTCTTaGTTAGTTTTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSAKDSS*LVFAKV
Trigger: GACCTTGGCAAAAACTAACAAAGAAGAATCCTTAGC...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGAGAGGTTTACAGTTTTaGTTTCCCCTTCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLRGLQF*FPLQYR
Trigger: TCTATACTGAAGGGGAAACAAAAACTGTAAACCTCT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp GTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTCAGTTTATGGTAGGTTGATTAAGCTCCAAAGGTaGAATCTGTTTGGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: VHISNWAYGIHSSVYGRLIKLQR*NLFGSH
Trigger: ATGAGAACCAAACAGATTCAACCTTTGGAGCTTAAT...CAACCTACCATAAACTGAGGAATGAATTCCATAAGCCCAGTTTGAAATGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCTTTCAGCCATAGATaGTTTCATATCCTTGTATGG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPFSHR*FHILVW
Trigger: CCATACAAGGATATGAAACAATCTATGGCTGAAAGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTGACTGTTTTGGTATaGATGAAGCAACAGAACACT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLTVLV*MKQQNT
Trigger: AGTGTTCTGTTGCTTCATCAATACCAAAACAGTCAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CCA 90 bp CTTGGATTTCTCTTTTCAAGTCTGGAGAAACAAGATCTAATTTTATaGCTTCTGAGAAGGAAAGGGCTTCCTTTGTTTGAGGATGGAAAA +
Preference number: 5 (lower is better)
Translates to: LGFLFSSLEKQDLIL*LLRRKGLPLFEDGK
Trigger: TTTTCCATCCTCAAACAAAGGAAGCCCTTTCCTTCTCAGAAGCCATAAAATTAGATCTTGTTTCTCCAGACTTGAAAAGAGAAATCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTGTGATGTCATCATaGCGGATATTCACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSVMSS*RIFTSF
Trigger: GAAGCTAGTGAATATCCGCAATGATGACATCACAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGACCCTCACACTCTaGAATGTACATAATGACATC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNETLTL*NVHNDI
Trigger: GATGTCATTATGTACATTCAAGAGTGTGAGGGTCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGAACACTGAATTCTaGTCCTTCACATCACTAAGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNENTEF*SFTSLS
Trigger: GCTTAGTGATGTGAAGGACAAGAATTCAGTGTTCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTGTTCTTTCTTGGTaGTCAACTCTTCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLVLSW*STLLPE
Trigger: TTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPHIAP*PDEVFL
Trigger: GAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAATCTCAAGTCTCCTTaGTGGGAAATGACATCCTCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNLKSP*WEMTSS
Trigger: TGAGGATGTCATTTCCCACAAAGGAGACTTGAGATT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGCCTTCCTCAAAATaGTTTTCTGTTTCTAAGACT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWPSSK*FSVSKT
Trigger: AGTCTTAGAAACAGAAAACAATTTTGAGGAAGGCCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGCCTTCCTCAAAATaGTTTTCTGTTTCTAAGACT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWPSSK*FSVSKT
Trigger: AGTCTTAGAAACAGAAAACAATTTTGAGGAAGGCCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGTGTATCTTTCTGTaGCATCCTTCAGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWCIFL*HPSVFH
Trigger: ATGAAAAACTGAAGGATGCAACAGAAAGATACACCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGTGTATCTTTCTGTaGCATCCTTCAGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWCIFL*HPSVFH
Trigger: ATGAAAAACTGAAGGATGCAACAGAAAGATACACCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCATGAGCTGCTTTTaGAAGCTTTTCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVMSCF*KLFYRY
Trigger: GTACCTGTAGAAAAGCTTCAAAAAGCAGCTCATGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILSSNV*LQFHVV
Trigger: AACAACATGAAACTGAAGCAAGACATTGCTAGACAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLSSNV*LQFHVV
Trigger: AACAACATGAAACTGAAGCAAGACATTGCTAGACAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTTTCTCTCTTTCTaGAACTGTCTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIFLSF*NCLLQL
Trigger: GAGCTGCAGAAGACAGTTCAAGAAAGAGAGAAAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATCTCTGTAAGATCTTaGCAGGTGTGGTATCCGTTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNISVRS*QVWYPF
Trigger: AAACGGATACCACACCTGCAAAGATCTTACAGAGAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFTVSV*VGDKVA
Trigger: TGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGGAATTGAGGTCCTCTaGCATTTTCTTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNGIEVL*HFLPVF
Trigger: GAAAACTGGAAGAAAATGCAAGAGGACCTCAATTCC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGAGCAGGTCTTGGTATaGGGTACTTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNEQVLV*GTFNNS
Trigger: GCTATTGTTAAAAGTACCCAATACCAAGACCTGCTC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCTATTTCTGAAGAATaGATCAGAATGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSISEE*IRMSAA
Trigger: TGCTGCTGACATTCTGATCAATTCTTCAGAAATAGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTCAAATCTGAGGGCTaGGATTTTGTTAAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVKSEG*DFVKEE
Trigger: CTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGAAGAGGATCCACTaGGTCTTTCTGAAACAGTTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLKRIH*VFLKQF
Trigger: AAACTGTTTCAGAAAGACCAAGTGGATCCTCTTCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGCTGTCTCATGGAATaGTTTAGCCAGAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSCLME*FSQNQD
Trigger: ATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLYCS*ASDTSL
Trigger: TAAACTTGTGTCTGATGCCAACGAGCAGTACAAACT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTCATCCATTGAATCTTaGTGTCGAATGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFISSIES*CRMMSM
Trigger: CATTGACATCATTCGACACAAAGATTCAATGGATGA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTCATCCATTGAATCTTaGTGTCGAATGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSSSIES*CRMMSM
Trigger: CATTGACATCATTCGACACAAAGATTCAATGGATGA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSWFSIL*SSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIWFSIL*SSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTTTTAGATGCAGAAAGTaGGTTCTCCATTCTATTGAG +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIFRCRK*VLHSIE
Trigger: CTCAATAGAATGGAGAACCAACTTTCTGCATCTAAA...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTAGATGCAGAAAGTaGGTTCTCCATTCTATTGAG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFRCRK*VLHSIE
Trigger: CTCAATAGAATGGAGAACCAACTTTCTGCATCTAAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCCAGTTGATAAATTCTaGCAAGGAATTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIPVDKF*QGILEF
Trigger: GAATTCCAGAATTCCTTGCAAGAATTTATCAACTGG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTCTAACCAACAAATTCTaGATCAAGACAACATCCTGT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLTNKF*IKTTSC
Trigger: ACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAG...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTCTAACCAACAAATTCTaGATCAAGACAACATCCTGT +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFILTNKF*IKTTSC
Trigger: ACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAG...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTTTCCCAGTTCTTTTaGGAAAACCTTATGGGCATC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSQFF*ENLMGI
Trigger: GATGCCCATAAGGTTTTCCAAAAAGAACTGGGAAAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTATTTTCTTTTCAATaGCTTCCACCACAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSLFSFQ*LPPQKG
Trigger: CCCTTTCTGTGGTGGAAGCAATTGAAAAGAAAATAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCAGCTACTAGATTATaGGTCACTGCCTCATCAATA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAATRL*VTASSI
Trigger: TATTGATGAGGCAGTGACCAATAATCTAGTAGCTGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAAGTGTTGAGCCTTaGATGCTGAATTTCAAATAC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRSVEP*MLNFKY
Trigger: GTATTTGAAATTCAGCATCAAAGGCTCAACACTTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTCAATAATGGCTTCTaGTTCTTTGAGGAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSFNNGF*FFEEKL
Trigger: GAGCTTTTCCTCAAAGAACAAGAAGCCATTATTGAA...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAAGGCCTTGGGCTATaGCTTCATTTAGTAAGAGTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQGLGL*LHLVRV
Trigger: AACTCTTACTAAATGAAGCAATAGCCCAAGGCCTTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGTAGCCTTTTCCAGATaGATAAGTTCTGTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNVAFSR*ISSVWS
Trigger: TGACCAGACAGAACTTATCAATCTGGAAAAGGCTAC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGATGAGCAAGTGTTTTAGGTCCACATTTCAAACTGGGCTTATGGAATTCATTAAGGGCTTCCTTTGTTaGAGGATGGAAAAATTGATA +
Preference number: 5 (lower is better)
Translates to: RMSKCFRSTFQTGLMEFIKGFLC*RMEKLI
Trigger: TATCAATTTTTCCATCCTCAAACAAAGGAAGCCCTT...AATGAATTCCATAAGCCCAGTTTGAAATGTGGACCTAAAACACTTGCTCATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTAGAGGTTTACAGTTTTaGTTTCCCCTTCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSRGLQF*FPLQYR
Trigger: TCTATACTGAAGGGGAAACAAAAACTGTAAACCTCT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCAGTCTTTCTGGTCTaGGGATCTCAGAAGATAATG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSVFLV*GSQKIM
Trigger: CATTATCTTCTGAGATCCCAAGACCAGAAAGACTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTATTAAGCTCCAAAGGTaGAATCTGTTTGGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSIKLQR*NLFGSH
Trigger: ATGAGAACCAAACAGATTCAACCTTTGGAGCTTAAT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp ATAAAGCAGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTACATCAAAGTCAAAGTaGGCAAATTCTTTCAACTCC +
Preference number: 5 (lower is better)
Translates to: IKQVYNPAPHETLFRGFSTSKSK*ANSFNS
Trigger: GGAGTTGAAAGAATTTGCCAACTTTGACTTTGATGT...AGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCTGCTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTATACAAATCGAAGATaGCCTTCGTCTTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNYTNRR*PSSSED
Trigger: ATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAGAACGAAATACATCTaGTTTCCCTTCCAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNRTKYI*FPFQFH
Trigger: ATGGAACTGGAAGGGAAACAAGATGTATTTCGTTCT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQVYFR*MESWRF
Trigger: AAACCTCCAAGACTCCATCAAACGAAAATATACCTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGCTGGAGAAAGACGTaGCATTTCATAGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNCWRKT*HFIEIA
Trigger: TGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTGCTGGGAAAATTTTaGACATTGGTCCAACTTTGT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLLGKF*TLVQLC
Trigger: ACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAATGGCCTCAGAAACTaGTTCTTTCTTGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNGLRN*FFLGCQ
Trigger: TTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACTTTTAACAATAGCTaGGTCAATTTGGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTFNNS*VNLAGT
Trigger: CGTTCCAGCCAAATTGACCAAGCTATTGTTAAAAGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCCTCCTTAATCTCATaGTCTAATTGTCCCAAATCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNASLIS*SNCPKS
Trigger: TGATTTGGGACAATTAGACAATGAGATTAAGGAGGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATTTCAAGCTGGTGTTaGGCTCCTTCAACTTTCTTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNISSWC*APSTFF
Trigger: AAAGAAAGTTGAAGGAGCCAAACACCAGCTTGAAAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAATTTCATCTACCCTTaGTCCAACAGTGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNNFIYP*SNSVTD
Trigger: ATCAGTGACACTGTTGGACAAAGGGTAGATGAAATT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCACCTCATCTTTTATTaGGGCATACATGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNHLIFY*GIHVFC
Trigger: GCAGAAAACATGTATGCCCAAATAAAAGATGAGGTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTAGAGTAAGCCAGTaGATAAATTCTTGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNARVSQ*INSCKE
Trigger: TTCCTTGCAAGAATTTATCAACTGGCTTACTCTAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSNLFH*ESFCTL
Trigger: AAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCACTTGGAATGTCTTaGATGGTCTTCACTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSLGMS*MVFTCS
Trigger: AGAACAAGTGAAGACCATCAAAGACATTCCAAGTGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATAAAGTCCTGGATCTCTaGGATTTCTCTTTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNKVLDL*DFSFQV
Trigger: GACTTGAAAAGAGAAATCCAAGAGATCCAGGACTTT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATGCTAAGGATTCTTCTTaGTTAGTTTTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNAKDSS*LVFAKV
Trigger: GACCTTGGCAAAAACTAACAAAGAAGAATCCTTAGC...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAGCTTCTTTTCCCTaGTCATTTCCAATCATTTTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPASFP*SFPIIF
Trigger: GAAAATGATTGGAAATGACAAGGGAAAAGAAGCTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGCCTTCCTCAAAATaGTTTTCTGTTTCTAAGACT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWPSSK*FSVSKT
Trigger: AGTCTTAGAAACAGAAAACAATTTTGAGGAAGGCCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTGGTGTATCTTTCTGTaGCATCCTTCAGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNWCIFL*HPSVFH
Trigger: ATGAAAAACTGAAGGATGCAACAGAAAGATACACCA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLSSNV*LQFHVV
Trigger: AACAACATGAAACTGAAGCAAGACATTGCTAGACAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCTATTTCTGAAGAATaGATCAGAATGTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSISEE*IRMSAA
Trigger: TGCTGCTGACATTCTGATCAATTCTTCAGAAATAGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCAGTTGTGCAATTCTTaGTGCAACCTTTTTATTCAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNQLCNS*CNLFIQ
Trigger: CTGAATAAAAAGGTTGCACAAAGAATTGCACAACTG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTCATCCATTGAATCTTaGTGTCGAATGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNSSIES*CRMMSM
Trigger: CATTGACATCATTCGACACAAAGATTCAATGGATGA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTTAGATGCAGAAAGTaGGTTCTCCATTCTATTGAG +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFRCRK*VLHSIE
Trigger: CTCAATAGAATGGAGAACCAACTTTCTGCATCTAAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCCAGTTGATAAATTCTaGCAAGGAATTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNPVDKF*QGILEF
Trigger: GAATTCCAGAATTCCTTGCAAGAATTTATCAACTGG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATCTAACCAACAAATTCTaGATCAAGACAACATCCTGT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNLTNKF*IKTTSC
Trigger: ACAGGATGTTGTCTTGATCAAGAATTTGTTGGTTAG...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATTTCAATAATGGCTTCTaGTTCTTTGAGGAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNFNNGF*FFEEKL
Trigger: GAGCTTTTCCTCAAAGAACAAGAAGCCATTATTGAA...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATATTAAGCTCCAAAGGTaGAATCTGTTTGGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNIKLQR*NLFGSH
Trigger: ATGAGAACCAAACAGATTCAACCTTTGGAGCTTAAT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS-3UTR CAA 90 bp AGGTTTATAACCCTGCACCACATGAAACCCTATTTAGAGGCTTTTCTTTTTAATACATCAAAGTCAAAGTaGGCAAATTCTTTCAACTCC +
Preference number: 5 (lower is better)
Translates to: RFITLHHMKPYLEAFLFNTSKSK*ANSFNS
Trigger: GGAGTTGAAAGAATTTGCCAACTTTGACTTTGATGT...ATTAAAAAGAAAAGCCTCTAAATAGGGTTTCATGTGGTGCAGGGTTATAAACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000151346.8
CDS GCA 72 bp TTCCTCGCCGGCTGCTGGCTCGACTGCCGGCCCGACTaGCAGCCCGACTCCCAGGACGGCTGGCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: FLAGCWLDCRPD*QPDSQDGWQTS
Trigger: AGAAGTCTGCCAGCCGTCCTGGGAGTCGGGCTGGCAGTCGGGCCGGCAGTCGAGCCAGCAGCCGGCGAGGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GGTCAAAGTCAGAGGCGTCGCTTCCTCGCCGGCTGCTaGCTCGACTGCCGGCCCGACTGCCAGCCCGACTCC +
Preference number: 6 (lower is better)
Translates to: GQSQRRRFLAGC*LDCRPDCQPDS
Trigger: GGAGTCGGGCTGGCAGTCGGGCCGGCAGTCGAGCCAGCAGCCGGCGAGGAAGCGACGCCTCTGACTTTGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GAAGGTCAAAGTCAGAGGCGTCGCTTCCTCGCCGGCTaGTGGCTCGACTGCCGGCCCGACTGCCAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: EGQSQRRRFLAG*WLDCRPDCQPD
Trigger: GTCGGGCTGGCAGTCGGGCCGGCAGTCGAGCCAGCAGCCGGCGAGGAAGCGACGCCTCTGACTTTGACCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CATCCTCGTACGCCTGCACGAACTCCTTCTCCTGGCTaGGGTTGGCCGGCTGCTGACCCGGCACGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: HPRTPARTPSPG*GWPAADPARSR
Trigger: CCGGCTACGTGCCGGGTCAGCAGCCGGCCAACCGCAGCCAGGAGAAGGAGTTCGTGCAGGCGTACGAGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147030.2
CDS GCA 72 bp GCCCTCGTCTGGAGCTGCCCTGGCCCCCGGCAGCACTaGTCTCTGAAGTGTCTGAGCAAGCCGACTGCGTCT +
Preference number: 6 (lower is better)
Translates to: ALVWSCPGPRQH*SLKCLSKPTAS
Trigger: AGACGCAGTCGGCTTGCTCAGACACTTCAGAGAGCAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGAGCAGGGAGCTCTTGCCGAGAGGCTCCGCCCTGGTaGCTCTCCAGTGCTCTTTCTGCCTGTCCCACCCAG +
Preference number: 6 (lower is better)
Translates to: RAGSSCREAPPW*LSSALSACPTQ
Trigger: CTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAGCTCCCTGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CCGACTCCCAGGACGGCTGGCAGACTTCTTAGGGTCTaGCCGGTTGGCTTTGGCACCTGTGGAGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: PTPRTAGRLLRV*PVGFGTCGGWG
Trigger: TCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAAGAAGTCTGCCAGCCGTCCTGGGAGTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GCCCGACTCCCAGGACGGCTGGCAGACTTCTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAGGCTGGGGAAGAGCTGTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: ARLPGRLADFLGSAR*ALAPVEAGEELLLV
Trigger: CACCAGCAACAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAAGAAGTCTGCCAGCCGTCCTGGGAGTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CCAGGACGGCTGGCAGACTTCTTAGGGTCTGCCCGGTaGGCTTTGGCACCTGTGGAGGCTGGGGAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: PGRLADFLGSAR*ALAPVEAGEEL
Trigger: CAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAAGAAGTCTGCCAGCCGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CTCCCAGGACGGCTGGCAGACTTCTTAGGGTCTGCCCGGTTGGCTTaGGCACCTGTGGAGGCTGGGGAAGAGCTGTTGCTGGTGTCACCA +
Preference number: 6 (lower is better)
Translates to: LPGRLADFLGSARLA*APVEAGEELLLVSP
Trigger: TGGTGACACCAGCAACAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCAACCGGGCAGACCCTAAGAAGTCTGCCAGCCGTCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GTCCTGGGGGAGGCAGTGGTGGTCTTCTTAGACATGGTTGGGATTTaGGACGGTTTGGTGAGCCCTCGTCTGGAGCTGCCCTGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: VLGEAVVVFLDMVGI*DGLVSPRLELPWPP
Trigger: CGGGGGCCAGGGCAGCTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAGACCACCACTGCCTCCCCCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GATGGGCACTATTGGAGTAGCTGCAGCAGTTCCGTCTaGGGCAGAGGCATTGGCAGCAGGCCCCTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: DGHYWSSCSSSV*GRGIGSRPLRG
Trigger: GCCTCGGAGGGGCCTGCTGCCAATGCCTCTGCCTCAGACGGAACTGCTGCAGCTACTCCAATAGTGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp CACACCGTGTCCCAGCGAGTGCTAAGCTCCTGGAGCTaGCCCTTTACCCACGTGGTGTCATCTCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: HTVSQRVLSSWS*PFTHVVSSLLP
Trigger: GGGCAGCAGAGATGACACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCGCTGGGACACGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GAGGCAGTGGTGGTCTTCTTAGACATGGTTGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAGCTGCCCTGGCCCCCGGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: EAVVVFLDMVGILDG*VSPRLELPWPPAAL
Trigger: CAGTGCTGCCGGGGGCCAGGGCAGCTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAGACCACCACTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AGCCAGTTGAGCACCTCCACCTCATCCTCCCCGAACAGCCTAGCATaGAACAGGGCCTGCTCGAGCAGGGATGCTTTCCGACAGCACCGG +
Preference number: 6 (lower is better)
Translates to: SQLSTSTSSSPNSLA*NRACSSRDAFRQHR
Trigger: CCGGTGCTGTCGGAAAGCATCCCTGCTCGAGCAGGCCCTGTTCAATGCTAGGCTGTTCGGGGAGGATGAGGTGGAGGTGCTCAACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS GCA 72 bp GTCCCGCTCATCAGCGACTCGGACCACGGCACGTTCTaGAGGGTCCAGCACAGAATCCTGGCTTTTCCGCTT +
Preference number: 6 (lower is better)
Translates to: VPLISDSDHGTF*RVQHRILAFPL
Trigger: AAGCGGAAAAGCCAGGATTCTGTGCTGGACCCTGCAGAACGTGCCGTGGTCCGAGTCGCTGATGAGCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CTCTTGCCGAGAGGCTCCGCCCTGGTGCCTCTCCAGTaGTCTTTCTGCCTGTCCCACCCAGTTGCAAAGATC +
Preference number: 6 (lower is better)
Translates to: LLPRGSALVPLQ*SFCLSHPVAKI
Trigger: GATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTCGGCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GGAGCTGTTGGAAGCGCTGGCTCAGCTCTGCCAGTTTaGCCTGCAGCACTGAGGCTGAGTTGCTGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GAVGSAGSALPV*PAALRLSCCQL
Trigger: CAGCTGACAGCAACTCAGCCTCAGTGCTGCAGGGCAAACTGGCAGAGCTGAGCCAGCGCTTCCAACAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCTCTTGCCAGAGGCTCCGCCCTGGTGCCTCTCCAGTaGTCTTTCTGCCTGTCCCACCCAGTTGCAAAGATC +
Preference number: 6 (lower is better)
Translates to: ALARGSALVPLQ*SFCLSHPVAKI
Trigger: GATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGGAGCCTCTGGCAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS GCA 72 bp AGAGGCATTGGCAGCAGGCCCCTCCGAGGCAGTCAATaGTACAGCGGGGATATCCTCTCCTGGCATCGGTGT +
Preference number: 6 (lower is better)
Translates to: RGIGSRPLRGSQ*YSGDILSWHRC
Trigger: ACACCGATGCCAGGAGAGGATATCCCCGCTGTAGCATTGACTGCCTCGGAGGGGCCTGCTGCCAATGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp GAGAGTTGGGGCAGCAGACTCCTCTGGTGTAGGCCCTaGAGGAGGAGGCATGCTAGGCTCCTCTGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: ESWGSRLLWCRP*RRRHARLLCSR
Trigger: TCTACTGCAGAGGAGCCTAGCATGCCTCCTCCTGCAGGGCCTACACCAGAGGAGTCTGCTGCCCCAACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp CCTGATCCTCGCTGTTTGCATGACGCCAGGAGGGCATaGTCACGAGACGAAGGGTCTTCAGCCCTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: PDPRCLHDARRA*SRDEGSSALLA
Trigger: AGCCAGCAGGGCTGAAGACCCTTCGTCTCGTGAGCATGCCCTCCTGGCGTCATGCAAACAGCGAGGATCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCTGGGTGCTGGCAAGAGCTGCCTGAAGTCTGTTCATaGGGTCGGCTGCAAGGTCTTCTAAGCCTTGGAGCG +
Preference number: 6 (lower is better)
Translates to: AGCWQELPEVCS*GRLQGLLSLGA
Trigger: CGCTCCAAGGCTTAGAAGACCTTGCAGCCGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAGCACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TGGCTTTGGCACCTGTGGAGGCTGGGGAAGAGCTGTTaGTGGTGTCACCAGCAAGGGATGTTCGGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: WLWHLWRLGKSC*WCHQQGMFGWS
Trigger: ACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAACAGCTCTTCCCCAGCCTCCACAGGTGCCAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GAGAGGCTCCGCCCTGGTGCCTCTCCAGTGTCTTTCTaGCTGTCCCACCCAGTTGCAAAGATCCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: ERLRPGASPVSF*LSHPVAKILQL
Trigger: AAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGACACTGGAGAGGCACCAGGGCGGAGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS GCA 72 bp TCATCCTCCCCGAACAGCCTAGCATTGAACAGGGCCTaGTCGAGCAGGGATGCTTTCCGACAGCACCGGTCT +
Preference number: 6 (lower is better)
Translates to: SSSPNSLALNRA*SSRDAFRQHRS
Trigger: AGACCGGTGCTGTCGGAAAGCATCCCTGCTCGAGCAGGCCCTGTTCAATGCTAGGCTGTTCGGGGAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS CCA 72 bp CTGGCTCCTCTGCGGTGGGCCCTGCAGGAGTTGGTATaGCAGGTTCCTCTGGGAGGAACATTTCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: LAPLRWALQELV*QVPLGGTFQLL
Trigger: AAGCAGCTGAAATGTTCCTCCCAGAGGAACCTGCCATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp GGTAGGTTCTTTGAGAGTTGGGGCAGCAGACTCCTCTaGTGTAGGCCCTGCAGGAGGAGGCATGCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: GRFFESWGSRLL*CRPCRRRHARL
Trigger: GAGCCTAGCATGCCTCCTCCTGCAGGGCCTACACCAGAGGAGTCTGCTGCCCCAACTCTCAAAGAACCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp GGTCGCTTCAGCTTGCTGCCTGATGACGAAATAACCTaGGTCCCGCTGGCTGGGGTGGCTGGAGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: GRFSLLPDDEIT*VPLAGVAGEEG
Trigger: GCCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAGGTTATTTCGTCATCAGGCAGCAAGCTGAAGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GTGGTCTTCTTAGACATGGTTGGGATTTTGGACGGTTaGGTGAGCCCTCGTCTGGAGCTGCCCTGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: VVFLDMVGILDG*VSPRLELPWPP
Trigger: CGGGGGCCAGGGCAGCTCCAGACGAGGGCTCACCAAACCGTCCAAAATCCCAACCATGTCTAAGAAGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GTCAGGACCTCCTCGAATCGAGCTCTGATGATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCGGGATGGCAGACAGCCAGGATGGCC +
Preference number: 6 (lower is better)
Translates to: VRTSSNRALMMVIQC*MVVMQSGWQTARMA
Trigger: GGCCATCCTGGCTGTCTGCCATCCCGACTGCATCACGACCATCAAGCACTGGATCACCATCATCAGAGCTCGATTCGAGGAGGTCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GCTGGTGTCGGTCGCTTCAGCTTGCTGCCTGATGACGAAATAACCTaGGTCCCGCTGGCTGGGGTGGCTGGAGAAGAAGGCATGGATGTA +
Preference number: 6 (lower is better)
Translates to: AGVGRFSLLPDDEIT*VPLAGVAGEEGMDV
Trigger: TACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAGGTTATTTCGTCATCAGGCAGCAAGCTGAAGCGACCGACACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATGGCACATCCACATCTTCTGCATCTAGCAGTCGGGTaGCCCCGAGCCTCTCGGCCACTTCAAAGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: MAHPHLLHLAVG*PRASRPLQRPA
Trigger: AGCAGGCCTTTGAAGTGGCCGAGAGGCTCGGGGTCACCCGACTGCTAGATGCAGAAGATGTGGATGTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS TCA 72 bp CTGTTGCAGGACTCCGGGGTCAGAGGCAACTGTGTCTaGGAGAAGCTTCCCCACGCTGGCCTCACAAGTCAA +
Preference number: 6 (lower is better)
Translates to: LLQDSGVRGNCV*EKLPHAGLTSQ
Trigger: TTGACTTGTGAGGCCAGCGTGGGGAAGCTTCTCTCAGACACAGTTGCCTCTGACCCCGGAGTCCTGCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CAGCCAGATCCTTGTCTGCTCCCTGCGATCTTCCAATaGGTTCCTCTCCCCGCCGCTTCAGGGCTTCAAAGG +
Preference number: 6 (lower is better)
Translates to: QPDPCLLPAIFQ*VPLPAASGLQR
Trigger: CCTTTGAAGCCCTGAAGCGGCGGGGAGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCACCCTGCAAATCCTTCAAGTCACTTTGGTTCTGCTaGAGAGCAGGGAGCTCTTGCCGAGAGGCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: SPCKSFKSLWFC*RAGSSCREAPP
Trigger: GGGCGGAGCCTCTCGGCAAGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGATTTGCAGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGGAACTTCTGCAGTTCATCTCGTAGAGCCTGCGTCTaGTTCAGCTCTGCCTCTGACCGGGCAAGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: RNFCSSSRRACV*FSSASDRAREA
Trigger: AGCCTCCCTTGCCCGGTCAGAGGCAGAGCTGAAGCAGACGCAGGCTCTACGAGATGAACTGCAGAAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ATGTCGATGTCTGAGCAGAGTGCCTCCCTGCTCCACTaGAGTCTCTCCCTGCAAAGGCAACAGCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: MSMSEQSASLLH*SLSLQRQQHSP
Trigger: AGGGCTGTGCTGTTGCCTTTGCAGGGAGAGACTGCAGTGGAGCAGGGAGGCACTCTGCTCAGACATCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CCA 72 bp CTGTTCATGCGGTCGGCTGCAAGGTCTTCTAAGCCTTaGAGCGGCAGGGCGACTGTCTCCAAACGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LFMRSAARSSKP*SGRATVSKRFF
Trigger: GAAGAAGCGTTTGGAGACAGTCGCCCTGCCGCTCCAAGGCTTAGAAGACCTTGCAGCCGACCGCATGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTCTCCTCTGTCTTCTGCAGCACCGATTCCCAGCACTaGTTCATGGTCTCCAGGCGGCTTCTCAGGCTGCTA +
Preference number: 6 (lower is better)
Translates to: LSSVFCSTDSQH*FMVSRRLLRLL
Trigger: TAGCAGCCTGAGAAGCCGCCTGGAGACCATGAACCAGTGCTGGGAATCGGTGCTGCAGAAGACAGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GGTGGGCCCTGCAGGAGTTGGTATGGCAGGTTCCTCTaGGAGGAACATTTCAGCTGCTTGAGTGTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GGPCRSWYGRFL*EEHFSCLSVRL
Trigger: GAGCCTGACACTCAAGCAGCTGAAATGTTCCTCCCAGAGGAACCTGCCATACCAACTCCTGCAGGGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp AGTATCTGGCTCCTCTGCGGTGGGCCCTGCAGGAGTTaGTATGGCAGGTTCCTCTGGGAGGAACATTTCAGC +
Preference number: 6 (lower is better)
Translates to: SIWLLCGGPCRS*YGRFLWEEHFS
Trigger: GCTGAAATGTTCCTCCCAGAGGAACCTGCCATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp CATGCTAGGCTCCTCTGCAGTAGATACTGGAACTGTTaGAGTATCTGGCTCCTCTGCGGTGGGCCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: HARLLCSRYWNC*SIWLLCGGPCR
Trigger: CCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAACAGTTCCAGTATCTACTGCAGAGGAGCCTAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp GAGTATCTGGCTCCTCTGCGGTGGGCCCTGCAGGAGTaGGTATGGCAGGTTCCTCTGGGAGGAACATTTCAG +
Preference number: 6 (lower is better)
Translates to: EYLAPLRWALQE*VWQVPLGGTFQ
Trigger: CTGAAATGTTCCTCCCAGAGGAACCTGCCATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp TTTCTACCTCAGATTGCCGGGTCTCCAGCTGGGCAATaGCACGGTGCCACCGCTCCTGTAGCTGAGAACCTT +
Preference number: 6 (lower is better)
Translates to: FLPQIAGSPAGQ*HGATAPVAENL
Trigger: AAGGTTCTCAGCTACAGGAGCGGTGGCACCGTGTCATTGCCCAGCTGGAGACCCGGCAATCTGAGGTAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GATGGAGACATATCTCCAGGACCCGTTAGGATGCCCTaGGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: DGDISPGPVRMP*AASFSCSCCCL
Trigger: AAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCTCAGGGCATCCTAACGGGTCCTGGAGATATGTCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TTGCTGGTGTCACCAGCAAGGGATGTTCGGCTGGAGTaGAAAGCTGGTGTCGGTCGCTTCAGCTTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: LLVSPARDVRLE*KAGVGRFSLLP
Trigger: AGGCAGCAAGCTGAAGCGACCGACACCAGCTTTTCACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CACCAGCAAATAGCTGGGCTTCCAGCAGCCGGACAGTaGCTTGCCTGTCTATCAGCCCTTCCTGAACAGCAC +
Preference number: 6 (lower is better)
Translates to: HQQIAGLPAAGQ*LACLSALPEQH
Trigger: GTGCTGTTCAGGAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CACAAGTCAACACCCAGGCCTGCAGGCTGTCAGCGCTaGTCTGGAATTGCTGATACTGGCCTAGCAACATGC +
Preference number: 6 (lower is better)
Translates to: HKSTPRPAGCQR*SGIADTGLATC
Trigger: GCATGTTGCTAGGCCAGTATCAGCAATTCCAGAGCAGCGCTGACAGCCTGCAGGCCTGGGTGTTGACTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TGGAAGCAGGCCAGGTGGCTTGCAGATTCCTCTAGCTaGTTTTGGCGAGCCACAGTAACCTCGGTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: WKQARWLADSSS*FWRATVTSVAF
Trigger: AAAGGCCACCGAGGTTACTGTGGCTCGCCAAAAGCAGCTAGAGGAATCTGCAAGCCACCTGGCCTGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCGTCATCCAGTGACCGACCCCTTTCAATAGACCGCTaGACAACCTTCTCCCACCGAGACTGCACACTAACC +
Preference number: 6 (lower is better)
Translates to: ASSSDRPLSIDR*TTFSHRDCTLT
Trigger: GGTTAGTGTGCAGTCTCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGAAAGGGGTCGGTCACTGGATGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGTTCTGACAGAGCAGTTTCCAGGCGCTGTTGGTGCTaGTTTGCCCACGTCAGGACCTCCTCGAATCGAGCT +
Preference number: 6 (lower is better)
Translates to: SSDRAVSRRCWC*FAHVRTSSNRA
Trigger: AGCTCGATTCGAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACTGCTCTGTCAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CCACTGTGCCTAGGTCAATCACCCCAGCAACTGCTCTaGAACCCTTTTGTTCCGTCTGCTGAGCCAACTCGC +
Preference number: 6 (lower is better)
Translates to: PLCLGQSPQQLL*NPFVPSAEPTR
Trigger: GCGAGTTGGCTCAGCAGACGGAACAAAAGGGTTGCAGAGCAGTTGCTGGGGTGATTGACCTAGGCACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CAATGCAGAAGCAAAGTCTACTTTCCCGAGCTGAATTaGTTCCGGCGGCGTGAGCACGTTGTTGCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: QCRSKVYFPELN*FRRREHVVARL
Trigger: GAGGCGGGCAACAACGTGCTCACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGACTTTGCTTCTGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CAGTCTCTCCCTGCAAAGGCAACAGCACAGCCCTGCTaGTGCAGGATGCTGTCCTCGGAAATTCCACCAGTT +
Preference number: 6 (lower is better)
Translates to: QSLPAKATAQPC*CRMLSSEIPPV
Trigger: AACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGGGCTGTGCTGTTGCCTTTGCAGGGAGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS GCA 72 bp GCCTGCAATGAGTCTAGCTTTTCTGACATGATGCCCTaGTCTGCCGGACATGTCAGGGAGGAGAGGGACTGC +
Preference number: 6 (lower is better)
Translates to: ACNESSFSDMMP*SAGHVREERDC
Trigger: GCAGTCCCTCTCCTCCCTGACATGTCCGGCAGAGCAGGGCATCATGTCAGAAAAGCTAGACTCATTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000125447.3
ENSMUST00000151346.8
CDS CCA 72 bp AGTTTACACACCGTGTCCCAGCGAGTGCTAAGCTCCTaGAGCTGCCCCTTTACCCACGTGGTGTCATCTCTG +
Preference number: 6 (lower is better)
Translates to: SLHTVSQRVLSS*SCPFTHVVSSL
Trigger: CAGAGATGACACCACGTGGGTAAAGGGGCAGCTCCAGGAGCTTAGCACTCGCTGGGACACGGTGTGTAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCTGAGGGATGGGCTCCTGATCCCGCTGGATTAGGGTaGTCTCAGCCCACTGGATCCATGCCAGAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: SEGWAPDPAGLG*SQPTGSMPEVL
Trigger: AAGAACTTCTGGCATGGATCCAGTGGGCTGAGACCACCCTAATCCAGCGGGATCAGGAGCCCATCCCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp AGCTGTTGCTGGTGTCACCAGCAAGGGATGTTCGGCTaGAGTGAAAAGCTGGTGTCGGTCGCTTCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: SCCWCHQQGMFG*SEKLVSVASAC
Trigger: GCAAGCTGAAGCGACCGACACCAGCTTTTCACTCCAGCCGAACATCCCTTGCTGGTGACACCAGCAACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTGAAGTGGAGTCTTGGTCCCGCTGGCTGGGGTGGCTaGAGAAGAAGGCATGGATGTACAGCTGTGGTTACT +
Preference number: 6 (lower is better)
Translates to: LKWSLGPAGWGG*RRRHGCTAVVT
Trigger: AGTAACCACAGCTGTACATCCATGCCTTCTTCTCCAGCCACCCCAGCCAGCGGGACCAAGACTCCACTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS CAA 72 bp ACTGTACTGAGCTTGTCCTCAACCTCAGCCAGCCAGTaGAGCACCTCCACCTCATCCTCCCCGAACAGCCTA +
Preference number: 6 (lower is better)
Translates to: TVLSLSSTSASQ*STSTSSSPNSL
Trigger: TAGGCTGTTCGGGGAGGATGAGGTGGAGGTGCTCAACTGGCTGGCTGAGGTTGAGGACAAGCTCAGTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS CAA 90 bp CCGCCCTGGTGCCTCTCCAGTGCTCTTTCTGCCTGTCCCACCCAGTaGCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTTGTTGTTTC +
Preference number: 6 (lower is better)
Translates to: PPWCLSSALSACPTQ*QRSSSFLWQVSCCF
Trigger: GAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACAGGCAGAAAGAGCACTGGAGAGGCACCAGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TGGAGCGGCAGGGCGACTGTCTCCAAACGCTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATGAGCAGTGAGAGTTCTTGGCACAGC +
Preference number: 6 (lower is better)
Translates to: WSGRATVSKRFFSSS*RYCSPMSSESSWHS
Trigger: GCTGTGCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAAGCGTTTGGAGACAGTCGCCCTGCCGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GCCTCCCTCAGCCACCCAGTTAGTTCCTCATATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCTTGTTCTAAAGTTCTGAGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: ASLSHPVSSSYVEWN*VASCRACSKVLRAL
Trigger: CAAGGCCCTCAGAACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATATGAGGAACTAACTGGGTGGCTGAGGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CTGTTGCTTTACAGCTTCAGGTTGGGTGCTGATGGCTaGCTGGCCACTCAGTCGCTGTCCAATGGCCTTCAC +
Preference number: 6 (lower is better)
Translates to: LLLYSFRLGADG*LATQSLSNGLH
Trigger: GTGAAGGCCATTGGACAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ATGTCACCCTGCAAATCCTTCAAGTCACTTTGGTTCTaGTGCAGAGCAGGGAGCTCTTGCCGAGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: MSPCKSFKSLWF*CRAGSSCREAP
Trigger: CGGAGCCTCTCGGCAAGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGATTTGCAGGGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ACCGCATGCCACTTCTGTTCCAAGAGCGCTACACTCTaGTCTGTTTTTGAGCCAGACCCAGAGTCACCACGG +
Preference number: 6 (lower is better)
Translates to: TACHFCSKSATL*SVFEPDPESPR
Trigger: CCGTGGTGACTCTGGGTCTGGCTCAAAAACAGAGCAGAGTGTAGCGCTCTTGGAACAGAAGTGGCATGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GGAGCTGCCCCTTTACCCACGTGGTGTCATCTCTGCTaGCCTCAATCAGTTCTCTGCCTGATCGTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: GAAPLPTWCHLC*PQSVLCLIVSG
Trigger: TCCTGAAACGATCAGGCAGAGAACTGATTGAGGGCAGCAGAGATGACACCACGTGGGTAAAGGGGCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ACTAGTTCTGACAGAGCAGTTTCCAGGCGCTGTTGGTaGTGCTTTGCCCACGTCAGGACCTCCTCGAATCGA +
Preference number: 6 (lower is better)
Translates to: TSSDRAVSRRCW*CFAHVRTSSNR
Trigger: TCGATTCGAGGAGGTCCTGACGTGGGCAAAGCAGCACCAACAGCGCCTGGAAACTGCTCTGTCAGAACTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCAGCACTGCTCTCTGAAGTGTCTGAGCAAGCCGACTaGGTCTCTAGAAGGTCAAAGTCAGAGGCGTCGCTT +
Preference number: 6 (lower is better)
Translates to: AALLSEVSEQAD*VSRRSKSEASL
Trigger: AAGCGACGCCTCTGACTTTGACCTTCTAGAGACGCAGTCGGCTTGCTCAGACACTTCAGAGAGCAGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CACTGTCCTTGTGGGCAGTTTCTCCGGAAGAAGAGATaGCAAGACCCTGGGTCCTCTTTGGCCCACTCTATC +
Preference number: 6 (lower is better)
Translates to: HCPCGQFLRKKR*QDPGSSLAHSI
Trigger: GATAGAGTGGGCCAAAGAGGACCCAGGGTCTTGGCATCTCTTCTTCCGGAGAAACTGCCCACAAGGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp TTGCTGAAGATGGCCCTGCACCACATCTTTCTGAGCTaGAGTGTGTTCCACAAGGCCCTGGAAGGACCTCTG +
Preference number: 6 (lower is better)
Translates to: LLKMALHHIFLS*SVFHKALEGPL
Trigger: CAGAGGTCCTTCCAGGGCCTTGTGGAACACACTGCAGCTCAGAAAGATGTGGTGCAGGGCCATCTTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp AGTAGATACTGGAACTGTTGGAGTATCTGGCTCCTCTaGGGTGGGCCCTGCAGGAGTTGGTATGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SRYWNCWSIWLL*GGPCRSWYGRF
Trigger: GAACCTGCCATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAACAGTTCCAGTATCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp TGTAGGCCCTGCAGGAGGAGGCATGCTAGGCTCCTCTaGAGTAGATACTGGAACTGTTGGAGTATCTGGCTC +
Preference number: 6 (lower is better)
Translates to: CRPCRRRHARLL*SRYWNCWSIWL
Trigger: GAGCCAGATACTCCAACAGTTCCAGTATCTACTGCAGAGGAGCCTAGCATGCCTCCTCCTGCAGGGCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp CTGGTCTCCTCTAGCTGTTGCTTTACAGCTTCAGGTTaGGTGCTGATGGCTGACTGGCCACTCAGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: LVSSSCCFTASG*VLMADWPLSRC
Trigger: ACAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAGCTAGAGGAGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp AGGTTCATGACGAGGTCAAGGTCCCCATGTACAGGCTaGTCCTCAGCCAACTGTGGCTCCACCTTGTACAAC +
Preference number: 6 (lower is better)
Translates to: RFMTRSRSPCTG*SSANCGSTLYN
Trigger: GTTGTACAAGGTGGAGCCACAGTTGGCTGAGGACCAGCCTGTACATGGGGACCTTGACCTCGTCATGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TGGGCAGTTTCTCCGGAAGAAGAGATGCCAAGACCCTaGGTCCTCTTTGGCCCACTCTATCTTCAGAGGACC +
Preference number: 6 (lower is better)
Translates to: WAVSPEEEMPRP*VLFGPLYLQRT
Trigger: GGTCCTCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGTCTTGGCATCTCTTCTTCCGGAGAAACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp CTCCTCTGCAGTAGATACTGGAACTGTTGGAGTATCTaGCTCCTCTGCGGTGGGCCCTGCAGGAGTTGGTAT +
Preference number: 6 (lower is better)
Translates to: LLCSRYWNCWSI*LLCGGPCRSWY
Trigger: ATACCAACTCCTGCAGGGCCCACCGCAGAGGAGCCAGATACTCCAACAGTTCCAGTATCTACTGCAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp GTGATGGCATCTGAAGAGGAAATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGTGACTCCACGAAGGCT +
Preference number: 6 (lower is better)
Translates to: VMASEEEIMRRR*PGDFCCDSTKA
Trigger: AGCCTTCGTGGAGTCACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAGATGCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCCTCGAATCGAGCTCTGATGATGGTGATCCAGTGCTaGATGGTCGTGATGCAGTCGGGATGGCAGACAGCC +
Preference number: 6 (lower is better)
Translates to: SSNRALMMVIQC*MVVMQSGWQTA
Trigger: GGCTGTCTGCCATCCCGACTGCATCACGACCATCAAGCACTGGATCACCATCATCAGAGCTCGATTCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCTGAGCCACCCGTGTCCGTTCCTGGAGAACCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTCGAAGAGCTGTCAGCTCCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: SEPPVSVPGEPHIAP*PDEVFLEELSAPGG
Trigger: GCCCCCAGGAGCTGACAGCTCTTCGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAGGAACGGACACGGGTGGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GACTCCAGTTGCACTGGATCCAGGGTAACCTGTAGCTCAGACATCTaGGACTTGCACTCGTCTATCCAGGGCACAAGGTCCTCCACATGC +
Preference number: 6 (lower is better)
Translates to: DSSCTGSRVTCSSDI*DLHSSIQGTRSSTC
Trigger: GCATGTGGAGGACCTTGTGCCCTGGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTACAGGTTACCCTGGATCCAGTGCAACTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCCACCCAATCCAAGAGAGCATC +
Preference number: 6 (lower is better)
Translates to: HSWKASLWLSLR*PHRSHPIQESI
Trigger: GATGCTCTCTTGGATTGGGTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TGGTTGATGACATCCACTTCAGTTCCCACAATCCACTaGAGCGCTTCTCCTTCCTCTGCAGCTGTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: WLMTSTSVPTIH*SASPSSAAVAA
Trigger: TGCCGCCACAGCTGCAGAGGAAGGAGAAGCGCTTCAGTGGATTGTGGGAACTGAAGTGGATGTCATCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATGGAATTGCTTTGCCCGCTTCCTGGCGTCATCCAGTaGCCGACCCCTTTCAATAGACCGCTGCACAACCTT +
Preference number: 6 (lower is better)
Translates to: MELLCPLPGVIQ*PTPFNRPLHNL
Trigger: AAGGTTGTGCAGCGGTCTATTGAAAGGGGTCGGTCACTGGATGACGCCAGGAAGCGGGCAAAGCAATTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GGAGAAGAAGGCATGGATGTACAGCTGTGGTTACTCTaGCTAGCACTTGAGCTGGAGCGGGTGGGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: GEEGMDVQLWLL*LALELERVGEA
Trigger: AGCTTCTCCCACCCGCTCCAGCTCAAGTGCTAGTCAGAGTAACCACAGCTGTACATCCATGCCTTCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CCAGCAACTGCTCTGCAACCCTTTTGTTCCGTCTGCTaGGCCAACTCGCTTTGGAGCTGCTGGAGTTGGTTT +
Preference number: 6 (lower is better)
Translates to: PATALQPFCSVC*ANSLWSCWSWF
Trigger: AAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGGGTTGCAGAGCAGTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CTTCTCTCCATGGCTGGATCCTTCCTCTCTTGGGCCTaGCACAGGTGGTTTACCAGCAGCAAAGCCTACCTT +
Preference number: 6 (lower is better)
Translates to: LLSMAGSFLSWA*HRWFTSSKAYL
Trigger: AAGGTAGGCTTTGCTGCTGGTAAACCACCTGTGTCAGGCCCAAGAGAGGAAGGATCCAGCCATGGAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp ACCTTCAATGCAGAAGCAAAGTCTACTTTCCCGAGCTaGATTGCTTCCGGCGGCGTGAGCACGTTGTTGCCC +
Preference number: 6 (lower is better)
Translates to: TFNAEAKSTFPS*IASGGVSTLLP
Trigger: GGGCAACAACGTGCTCACGCCGCCGGAAGCAATTCAGCTCGGGAAAGTAGACTTTGCTTCTGCATTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCACCCAATCCAAGAGAGCATCG +
Preference number: 6 (lower is better)
Translates to: HSWKASLWLSLR*PHRSTQSKRAS
Trigger: CGATGCTCTCTTGGATTGGGTGCTTCTGTGGGGTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS TCA 72 bp GGGCACTGGAGCCCTGAAGTCAGACCCTCTAGCCCCTaGTCAGGTCTGTTTTTCACCTCACTGATAACAGTG +
Preference number: 6 (lower is better)
Translates to: GHWSPEVRPSSP*SGLFFTSLITV
Trigger: CACTGTTATCAGTGAGGTGAAAAACAGACCTGATCAGGGGCTAGAGGGTCTGACTTCAGGGCTCCAGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp TGTATCGGGCCTGCAATGAGTCTAGCTTTTCTGACATaGTGCCCTGCTCTGCCGGACATGTCAGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: CIGPAMSLAFLT*CPALPDMSGRR
Trigger: TCTCCTCCCTGACATGTCCGGCAGAGCAGGGCATCATGTCAGAAAAGCTAGACTCATTGCAGGCCCGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000125447.3
ENSMUST00000151346.8
CDS TCA 72 bp TGCTCGAGCAGGGATGCTTTCCGACAGCACCGGTCTTaGATTTCACTGTATCGGGCCTGCAATGAGTCTAGC +
Preference number: 6 (lower is better)
Translates to: CSSRDAFRQHRS*ISLYRACNESS
Trigger: GCTAGACTCATTGCAGGCCCGATACAGTGAAATTCAAGACCGGTGCTGTCGGAAAGCATCCCTGCTCGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS GCA 72 bp CTGCAGCTCCACACTAGGCAGGTCATTACCCCACTCTaGTCGCTCCAGTTTCATCTGCATCTCTTCTACCCA +
Preference number: 6 (lower is better)
Translates to: LQLHTRQVITPL*SLQFHLHLFYP
Trigger: TGGGTAGAAGAGATGCAGATGAAACTGGAGCGAGCAGAGTGGGGTAATGACCTGCCTAGTGTGGAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGGGCAAAGCCACAGGAGCCCAGTGTAGTAACCAGGTaGTCCAGAGTATCTAGGTTCTCCTTCTGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: RAKPQEPSVVTR*SRVSRFSFWSS
Trigger: GGAAGACCAGAAGGAGAACCTAGATACTCTGGAGCACCTGGTTACTACACTGGGCTCCTGTGGCTTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ACTGGAGGCTATCCGTGTCTCTGCCAATGGCTCCCATaGCATCTAGCTCATCATCCAGGTCAGCCAATTGAG +
Preference number: 6 (lower is better)
Translates to: TGGYPCLCQWLP*HLAHHPGQPIE
Trigger: CTCAATTGGCTGACCTGGATGATGAGCTAGATGGCATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TGGATTTCTTTTGCAGCCAGATCCTTGTCTGCTCCCTaGGATCTTCCAATGAGTTCCTCTCCCCGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: WISFAARSLSAP*DLPMSSSPRRF
Trigger: GAAGCGGCGGGGAGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAAAGAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ACCTCCTCGAATCGAGCTCTGATGATGGTGATCCAGTaGTTGATGGTCGTGATGCAGTCGGGATGGCAGACA +
Preference number: 6 (lower is better)
Translates to: TSSNRALMMVIQ*LMVVMQSGWQT
Trigger: TGTCTGCCATCCCGACTGCATCACGACCATCAAGCACTGGATCACCATCATCAGAGCTCGATTCGAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TGCTTTACAGCTTCAGGTTGGGTGCTGATGGCTGACTaGCCACTCAGTCGCTGTCCAATGGCCTTCACCTTT +
Preference number: 6 (lower is better)
Translates to: CFTASGWVLMAD*PLSRCPMAFTF
Trigger: AAAGGTGAAGGCCATTGGACAGCGACTGAGTGGCCAGTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GACTGGGACACAGCCTCATCCAGAGCCAGGGCACGCTaGCGCACCTCATCTTTTATTTGGGCATACATGTTT +
Preference number: 6 (lower is better)
Translates to: DWDTASSRARAR*RTSSFIWAYMF
Trigger: AAACATGTATGCCCAAATAAAAGATGAGGTGCGCCAGCGTGCCCTGGCTCTGGATGAGGCTGTGTCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CCTGTTCTTGGATCTACTATGCCACCAGCAAATAGCTaGGCTTCCAGCAGCCGGACAGTGACTTGCCTGTCT +
Preference number: 6 (lower is better)
Translates to: PVLGSTMPPANS*ASSSRTVTCLS
Trigger: AGACAGGCAAGTCACTGTCCGGCTGCTGGAAGCCCAGCTATTTGCTGGTGGCATAGTAGATCCAAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCCGGAAGAAGAGATGCCAAGACCCTGGGTCCTCTTTaGCCCACTCTATCTTCAGAGGACCCTTCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SGRRDAKTLGPL*PTLSSEDPSSV
Trigger: CACAGAAGAAGGGTCCTCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGTCTTGGCATCTCTTCTTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp AGAACCCCTGGGGACAGAAGCAAGCTGATCCCTAGTTaGCTGCAGGTCAACAGAGCAGCACATCTGATGAAG +
Preference number: 6 (lower is better)
Translates to: RTPGDRSKLIPS*LQVNRAAHLMK
Trigger: CTTCATCAGATGTGCTGCTCTGTTGACCTGCAGCCAACTAGGGATCAGCTTGCTTCTGTCCCCAGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp GAGCTCCTGGATCTGCTGGGAAAAATGTGCAATATCTaGATCTGGCTGGTTCCCAGAGGCCAGCAGTCGGCT +
Preference number: 6 (lower is better)
Translates to: ELLDLLGKMCNI*IWLVPRGQQSA
Trigger: AGCCGACTGCTGGCCTCTGGGAACCAGCCAGATCAAGATATTGCACATTTTTCCCAGCAGATCCAGGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GGATCCAGGGTAACCTGTAGCTCAGACATCTTGGACTaGCACTCGTCTATCCAGGGCACAAGGTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: GSRVTCSSDILD*HSSIQGTRSST
Trigger: TGTGGAGGACCTTGTGCCCTGGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTACAGGTTACCCTGGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TGCACTGGATCCAGGGTAACCTGTAGCTCAGACATCTaGGACTTGCACTCGTCTATCCAGGGCACAAGGTCC +
Preference number: 6 (lower is better)
Translates to: CTGSRVTCSSDI*DLHSSIQGTRS
Trigger: GGACCTTGTGCCCTGGATAGACGAGTGCAAGTCCAAGATGTCTGAGCTACAGGTTACCCTGGATCCAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CGGACTCGACAGTGGAACTGCCCAATCCCCTCTAGCTaGTTTTCCATGGTCAGGCAGCTACTGCTCACTCTT +
Preference number: 6 (lower is better)
Translates to: RTRQWNCPIPSS*FSMVRQLLLTL
Trigger: AAGAGTGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GCTGCTGCAGGATGCTGTCCTCGGAAATTCCACCAGTaGGCTCACAGACTTCTCACAGTTCCTTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AAAGCCPRKFHQ*AHRLLTVPFCW
Trigger: CCAGCAGAAAGGAACTGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CAA 90 bp GGCCACTTCAAAGGCCTGCTCCAGGTTCTCCCTGTTACTCTGCACTaGTACTCTCTCCATGTCTACCAGATCGGGCCTGTATCGGTGAAT +
Preference number: 6 (lower is better)
Translates to: GHFKGLLQVLPVTLH*YSLHVYQIGPVSVN
Trigger: ATTCACCGATACAGGCCCGATCTGGTAGACATGGAGAGAGTACAAGTGCAGAGTAACAGGGAGAACCTGGAGCAGGCCTTTGAAGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS CAA 90 bp TCCAGGCGGGACAGACTGGTGCTGCGGTCGCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTTCTCAGAAATGACTCCAGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: SRRDRLVLRSQVYFR*MESWRFLRNDSRSR
Trigger: CCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGCGACCGCAGCACCAGTCTGTCCCGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CCTGTAGCTGAGAACCTTTCTCCTGATAGCGCTCCAAATCCAAGTTaGGCTCTGATGCTGGGTGCCGGAGCTGTTCTGCCACTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: PVAENLSPDSAPNPS*ALMLGAGAVLPLSW
Trigger: CCAAGAAAGTGGCAGAACAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGATTTGGAGCGCTATCAGGAGAAAGGTTCTCAGCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GACCCCACAGAAGCCACCCAATCCAAGAGAGCATCGATCTTCCTCTaGTTCTCTGCCAGCTCTGTCGCTGCTTTACTCTTCTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: DPTEATQSKRASIFL*FSASSVAALLFSVS
Trigger: GGAGACAGAGAAGAGTAAAGCAGCGACAGAGCTGGCAGAGAACAAGAGGAAGATCGATGCTCTCTTGGATTGGGTGGCTTCTGTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TGGTCTTGTTCTAGACGAATTGGACCGAGAGCCATCAGCTTCCGCTaGGTTTCAGCAACCCAAGCTAGTTCTGCATCAGCAGCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: WSCSRRIGPRAISFR*VSATQASSASAACS
Trigger: CGAGCAGGCTGCTGATGCAGAACTAGCTTGGGTTGCTGAAACCAAGCGGAAGCTGATGGCTCTCGGTCCAATTCGTCTAGAACAAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AGCTCCACGGTGGCACTTTTATTGTCACTGATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATCAGGGGAGGCATTCGCAGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: SSTVALLLSLMHSLI*STSAGIRGGIRRRE
Trigger: CTCTCGCCTGCGAATGCCTCCCCTGATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CCACCAGTTATCACCTGTCCCTCTAAAATCCTTGTGGCTGTCTCCTaGTCAAGCAGCCCAGCTGCCACAGCCTCCTTTACAGAGCACAGA +
Preference number: 6 (lower is better)
Translates to: PPVITCPSKILVAVS*SSSPAATASFTEHR
Trigger: TCTGTGCTCTGTAAAGGAGGCTGTGGCAGCTGGGCTGCTTGACAAGGAGACAGCCACAAGGATTTTAGAGGGACAGGTGATAACTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp GGGCAGTTTCTCCGGAAGAAGAGATGCCAAGACCCTGGGTCCTCTTaGGCCCACTCTATCTTCAGAGGACCCTTCTTCTGTGTCTCTAAC +
Preference number: 6 (lower is better)
Translates to: GQFLRKKRCQDPGSS*AHSIFRGPFFCVSN
Trigger: GTTAGAGACACAGAAGAAGGGTCCTCTGAAGATAGAGTGGGCCAAAGAGGACCCAGGGTCTTGGCATCTCTTCTTCCGGAGAAACTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CACAGCCCTGCTGCTGCAGGATGCTGTCCTCGGAAATTCCACCAGTaGGCTCACAGACTTCTCACAGTTCCTTTCTGCTGGGTTATCAAG +
Preference number: 6 (lower is better)
Translates to: HSPAAAGCCPRKFHQ*AHRLLTVPFCWVIK
Trigger: CTTGATAACCCAGCAGAAAGGAACTGTGAGAAGTCTGTGAGCCAACTGGTGGAATTTCCGAGGACAGCATCCTGCAGCAGCAGGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CAA 90 bp TTGGGTGGCATGAAGGACTTCCACGATCTCCTGTTAACATTATCTTaGCGTTCTGCATTTGGCCGACGTCTGGGTGGCACGGGTGCTGAC +
Preference number: 6 (lower is better)
Translates to: LGGMKDFHDLLLTLS*RSAFGRRLGGTGAD
Trigger: GTCAGCACCCGTGCCACCCAGACGTCGGCCAAATGCAGAACGCAAAGATAATGTTAACAGGAGATCGTGGAAGTCCTTCATGCCACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp TTTACGAACACTGTACTGAGCTTGTCCTCAACCTCAGCCAGCCAGTaGAGCACCTCCACCTCATCCTCCCCGAACAGCCTAGCATTGAAC +
Preference number: 6 (lower is better)
Translates to: FTNTVLSLSSTSASQ*STSTSSSPNSLALN
Trigger: GTTCAATGCTAGGCTGTTCGGGGAGGATGAGGTGGAGGTGCTCAACTGGCTGGCTGAGGTTGAGGACAAGCTCAGTACAGTGTTCGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151346.8
CDS TCA 72 bp CTGGCATCTCTGTCAGTCTTGGAGCTGGCTGGAGACTaGATTTGTTTGAGCAGTCTCTGCTCACACTCCTCC +
Preference number: 6 (lower is better)
Translates to: LASLSVLELAGD*ICLSSLCSHSS
Trigger: GGAGGAGTGTGAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TTCAGCAAAGAGTTCCGTCTGCTGACTAAGCTGCTCTaGCAGCACTCTACTATCCTCTGCCTGGCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: FSKEFRLLTKLL*QHSTILCLARL
Trigger: AAGCCTGGCCAGGCAGAGGATAGTAGAGTGCTGTCAGAGCAGCTTAGTCAGCAGACGGAACTCTTTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GGTTCCCAGAGGCCAGCAGTCGGCTTTTGTTTTCCATaGACTGCTGCAGCTTGTTGGAGAGCTGCTCAAACA +
Preference number: 6 (lower is better)
Translates to: GSQRPAVGFCFP*TAAACWRAAQT
Trigger: TGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGCCTCTGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp AGCTCCTGGATCTGCTGGGAAAAATGTGCAATATCTTaGTCTGGCTGGTTCCCAGAGGCCAGCAGTCGGCTT +
Preference number: 6 (lower is better)
Translates to: SSWICWEKCAIS*SGWFPEASSRL
Trigger: AAGCCGACTGCTGGCCTCTGGGAACCAGCCAGATCAAGATATTGCACATTTTTCCCAGCAGATCCAGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CAGAGCTCGCCTCCTTTTGAACCTCCTCCATTCTGCTaGAGACAGTCTGAAGGCTTTCCTGTCGTTCTCGCA +
Preference number: 6 (lower is better)
Translates to: QSSPPFEPPPFC*RQSEGFPVVLA
Trigger: TGCGAGAACGACAGGAAAGCCTTCAGACTGTCTTCAGCAGAATGGAGGAGGTTCAAAAGGAGGCGAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GCGCTTCTCCTTCCTCTGCAGCTGTGGCGGCATCATTaGGCGCTTTCAGTTTCCTATAGAAGTCCTCTACTC +
Preference number: 6 (lower is better)
Translates to: ALLLPLQLWRHH*ALSVSYRSPLL
Trigger: GAGTAGAGGACTTCTATAGGAAACTGAAAGCGCTCAATGATGCCGCCACAGCTGCAGAGGAAGGAGAAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CAGTCCATCTACGTTCAAGACTCTCCAGCTGCCCAGTaGTTTTCTCTCTATCAGCCAGCTCAGCTGACTGGG +
Preference number: 6 (lower is better)
Translates to: QSIYVQDSPAAQ*FSLYQPAQLTG
Trigger: CCCAGTCAGCTGAGCTGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGAACGTAGATGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp AGCCGGACAGTGACTTGCCTGTCTATCAGCCCTTCCTaGACAGCACGGAAAATGCTAACTTTCCGACCTGAC +
Preference number: 6 (lower is better)
Translates to: SRTVTCLSISPS*TARKMLTFRPD
Trigger: GTCAGGTCGGAAAGTTAGCATTTTCCGTGCTGTTCAGGAAGGGCTGATAGACAGGCAAGTCACTGTCCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CATTCCTGGAAGGCTAGCCTGTGGCTTTCTCTCAGATaGCCCCACAGAAGCCAATCCAAGAGAGCATCGATC +
Preference number: 6 (lower is better)
Translates to: HSWKASLWLSLR*PHRSQSKRASI
Trigger: GATCGATGCTCTCTTGGATTGGCTTCTGTGGGGTCATCTGAGAGAAAGCCACAGGCTAGCCTTCCAGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS TCA 72 bp ATGGCAGGTTCCTCTGGGAGGAACATTTCAGCTGCTTaGGTGTCAGGCTCCTCTGAGGTAACATCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: MAGSSGRNISAA*VSGSSEVTSSS
Trigger: AGACGAGGATGTTACCTCAGAGGAGCCTGACACTCAAGCAGCTGAAATGTTCCTCCCAGAGGAACCTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp CAGGGAATGAGTGAGTCCACTCGGCTTTGGTATTCTTaGCATCTGGAGTCCACTTCCGTAGCACTGATCCCT +
Preference number: 6 (lower is better)
Translates to: QGMSESTRLWYS*HLESTSVALIP
Trigger: AGGGATCAGTGCTACGGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTCACTCATTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS GCA 72 bp TTTGTACACTCTAAGCGCAGGGTGACCAGCTCATCCTaGAGGCGCATGACCCTAAAGGCAAGCTCTTCTAAC +
Preference number: 6 (lower is better)
Translates to: FVHSKRRVTSSS*RRMTLKASSSN
Trigger: GTTAGAAGAGCTTGCCTTTAGGGTCATGCGCCTGCAGGATGAGCTGGTCACCCTGCGCTTAGAGTGTACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCTTCCTGTAACTGCTTTGTTGTTGCAAGCTGCTGTTaGAGGACTCCGGGGTCAGAGGCAACTGTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSCNCFVVASCC*RTPGSEATVSE
Trigger: CTCAGACACAGTTGCCTCTGACCCCGGAGTCCTGCAACAGCAGCTTGCAACAACAAAGCAGTTACAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GAGGCCAGCAGTCGGCTTTTGTTTTCCATGAACTGCTaGAGCTTGTTGGAGAGCTGCTCAAACATCTCAGCC +
Preference number: 6 (lower is better)
Translates to: EASSRLLFSMNC*SLLESCSNISA
Trigger: GGCTGAGATGTTTGAGCAGCTCTCCAACAAGCTGCAGCAGTTCATGGAAAACAAAAGCCGACTGCTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCATAAACTGGACCTGCTG +
Preference number: 6 (lower is better)
Translates to: SCLVQLLMLLPS*FKFLQHKLDLL
Trigger: CAGCAGGTCCAGTTTATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CGTCCTCAATTTGTGACTGGAGGCTATCCGTGTCTCTaGCAATGGCTCCCATGCCATCTAGCTCATCATCCA +
Preference number: 6 (lower is better)
Translates to: RPQFVTGGYPCL*QWLPCHLAHHP
Trigger: TGGATGATGAGCTAGATGGCATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGTTCCTCATATGTAGAGTGGAACTTGGTGGCCAGCTaGCGGGCTTGTTCTAAAGTTCTGAGGGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: SSSYVEWNLVAS*RACSKVLRALE
Trigger: CTCCAAGGCCCTCAGAACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATATGAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CTTGTCCTGGATTTCTTTTGCAGCCAGATCCTTGTCTaGTCCCTGCGATCTTCCAATGAGTTCCTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: LVLDFFCSQILV*SLRSSNEFLSP
Trigger: CGGGGAGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AACTGGCCCAGGGCCAAGAGAGCACCTTCTAGCTTATaGTGTCTATGGGCAATCTTCTCACCCAGATTCTCC +
Preference number: 6 (lower is better)
Translates to: NWPRAKRAPSSL*CLWAIFSPRFS
Trigger: GGAGAATCTGGGTGAGAAGATTGCCCATAGACAGCATAAGCTAGAAGGTGCTCTCTTGGCCCTGGGCCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ATGGCAGACAGCCAGGATGGCCTCTCCCATCGCCACTaGTGTGTTCACATCTACCCGCTTTTCTTCTACTTT +
Preference number: 6 (lower is better)
Translates to: MADSQDGLSHRH*CVHIYPLFFYF
Trigger: AAAGTAGAAGAAAAGCGGGTAGATGTGAACACAGCAGTGGCGATGGGAGAGGCCATCCTGGCTGTCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TGGCTCTGCCGACCCAGGCTCTCAGATCTTGAAGTTTaGCTTGCAGTTCCTTGTGCCGATTTAACACTGTGG +
Preference number: 6 (lower is better)
Translates to: WLCRPRLSDLEV*LAVPCADLTLW
Trigger: CCACAGTGTTAAATCGGCACAAGGAACTGCAAGGCAAACTTCAAGATCTGAGAGCCTGGGTCGGCAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp GGGTCCATCAGGAGAGAAAATTTCCTTAGCAGGCACTaGAGTAGCTGGAGTGGCAGACCATTCTGGGATGGA +
Preference number: 6 (lower is better)
Translates to: GSIRRENFLSRH*SSWSGRPFWDG
Trigger: TCCATCCCAGAATGGTCTGCCACTCCAGCTACTGCAGTGCCTGCTAAGGAAATTTTCTCTCCTGATGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp TGCCTGATCCAGGGAATGAGTGAGTCCACTCGGCTTTaGTATTCTTGCCATCTGGAGTCCACTTCCGTAGCA +
Preference number: 6 (lower is better)
Translates to: CLIQGMSESTRL*YSCHLESTSVA
Trigger: TGCTACGGAAGTGGACTCCAGATGGCAAGAATACCAAAGCCGAGTGGACTCACTCATTCCCTGGATCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS CCA 72 bp TTTCTCGAAGAGCTGTCAGCTCCTGGGGGCTCAGCTTaGTCTGGTTCTCTTCCAGGAACCCTTCAATGTCTT +
Preference number: 6 (lower is better)
Translates to: FLEELSAPGGSA*SGSLPGTLQCL
Trigger: AAGACATTGAAGGGTTCCTGGAAGAGAACCAGACCAAGCTGAGCCCCCAGGAGCTGACAGCTCTTCGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCAGCTCATCAAACATTTGCTGGAATTGCTGGGTGCTaGCAAGAGCTGCCTGAAGTCTGTTCATGCGGTCGG +
Preference number: 6 (lower is better)
Translates to: SAHQTFAGIAGC*QELPEVCSCGR
Trigger: CCGACCGCATGAACAGACTTCAGGCAGCTCTTGCCAGCACCCAGCAATTCCAGCAAATGTTTGATGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCCCTCAGCCACCCAGTTAGTTCCTCATATGTAGAGTaGAACTTGGTGGCCAGCTGCCGGGCTTGTTCTAAA +
Preference number: 6 (lower is better)
Translates to: SLSHPVSSSYVE*NLVASCRACSK
Trigger: TTTAGAACAAGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATATGAGGAACTAACTGGGTGGCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp AGGGCCAAGAGAGCACCTTCTAGCTTATGCTGTCTATaGGCAATCTTCTCACCCAGATTCTCCCAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: RAKRAPSSLCCL*AIFSPRFSQRC
Trigger: GCACCTCTGGGAGAATCTGGGTGAGAAGATTGCCCATAGACAGCATAAGCTAGAAGGTGCTCTCTTGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TGTGTTAGCCAGCTCATTAGTTCCTCTAAGGCATGTTaGAACTGGCCCAGGGCCAAGAGAGCACCTTCTAGC +
Preference number: 6 (lower is better)
Translates to: CVSQLISSSKAC*NWPRAKRAPSS
Trigger: GCTAGAAGGTGCTCTCTTGGCCCTGGGCCAGTTCCAACATGCCTTAGAGGAACTAATGAGCTGGCTAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTGCCTGTTTTAAGGCTTGCTCAAGCCGGCTTTGCTTaGAAACAGAGAGTTTACACACCGTGTCCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: LPVLRLAQAGFA*KQRVYTPCPSE
Trigger: CTCGCTGGGACACGGTGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CATGCTGCCGTATATTCTCACTCTGCACTGTCCTTGTaGGCAGTTTCTCCGGAAGAAGAGATGCCAAGACCC +
Preference number: 6 (lower is better)
Translates to: HAAVYSHSALSL*AVSPEEEMPRP
Trigger: GGGTCTTGGCATCTCTTCTTCCGGAGAAACTGCCCACAAGGACAGTGCAGAGTGAGAATATACGGCAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp AGAGTTCAGCAATCCCCCTGTGTCCAGCTCGCTATGTaGCTCCAGATCAGCCAGAAGCTTAAATTCTCCACC +
Preference number: 6 (lower is better)
Translates to: RVQQSPCVQLAM*LQISQKLKFST
Trigger: GGTGGAGAATTTAAGCTTCTGGCTGATCTGGAGCCACATAGCGAGCTGGACACAGGGGGATTGCTGAACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp CTGCCTGATGACGAAATAACCTCAGGGCTGAGGAGCTaGAGGTCAGGACAATGGCTGTCCTTGACAGCTTTA +
Preference number: 6 (lower is better)
Translates to: LPDDEITSGLRS*RSGQWLSLTAL
Trigger: TAAAGCTGTCAAGGACAGCCATTGTCCTGACCTCCAGCTCCTCAGCCCTGAGGTTATTTCGTCATCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS CAA 72 bp TTGAGGTCTGTGCCCACTGGGGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGCCAGTCAAACATAGCC +
Preference number: 6 (lower is better)
Translates to: LRSVPTGGMVQS*ITVLSSQSNIA
Trigger: GGCTATGTTTGACTGGCTAGATAACACTGTGATCAAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GCAACCCTTTTGTTCCGTCTGCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTTTGCAGAACCATCACA +
Preference number: 6 (lower is better)
Translates to: ATLLFRLLSQLA*ELLELVCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CATGGTCCATCTTCTCTACCATCAGGTTCAGCTCTGAGCGCAGAGTaGTGGCACTTGAACCTGATGGAGACTGCTGGAGAAAGACGTTGC +
Preference number: 6 (lower is better)
Translates to: HGPSSLPSGSALSAE*WHLNLMETAGERRC
Trigger: GCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGCTGAACCTGATGGTAGAGAAGATGGACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TTGACAGTGTTGAGGTCTGTGCCCACTGGGGGCATGGTGCAGAGCTaGATCACAGTGTTATCTAGCCAGTCAAACATAGCCTGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: LTVLRSVPTGGMVQS*ITVLSSQSNIAWRV
Trigger: CACTCTCCAGGCTATGTTTGACTGGCTAGATAACACTGTGATCAAGCTCTGCACCATGCCCCCAGTGGGCACAGACCTCAACACTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCAGGTCAACAATTCCACCAGTTATCACCTGTCCCTCTAAAATCCTaGTGGCTGTCTCCTTGTCAAGCAGCCCAGCTGCCACAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SGQQFHQLSPVPLKS*WLSPCQAAQLPQPP
Trigger: AGGAGGCTGTGGCAGCTGGGCTGCTTGACAAGGAGACAGCCACAAGGATTTTAGAGGGACAGGTGATAACTGGTGGAATTGTTGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp AGCCTCCCTTGGAGGAACTTTTCATGGCCCTGGGCCAGGTTGCACTaGAGAATCTGTGCTCCTGCATTTCATCTGTGTTACCACTTGCTG +
Preference number: 6 (lower is better)
Translates to: SLPWRNFSWPWARLH*RICAPAFHLCYHLL
Trigger: CAGCAAGTGGTAACACAGATGAAATGCAGGAGCACAGATTCTCAAGTGCAACCTGGCCCAGGGCCATGAAAAGTTCCTCCAAGGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp AACTCCTGTGTGATGGCATCTGAAGAGGAAATCATGCGGCGGCGCTaGCCTGGAGATTTCTGCTGTGACTCCACGAAGGCTTTATATGTC +
Preference number: 6 (lower is better)
Translates to: NSCVMASEEEIMRRR*PGDFCCDSTKALYV
Trigger: GACATATAAAGCCTTCGTGGAGTCACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGATTTCCTCTTCAGATGCCATCACACAGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GTTCCGTCTGCTGAGCCAACTCGCTTTGGAGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGTCATGGTAAGTCTTGTTCAGCACAC +
Preference number: 6 (lower is better)
Translates to: VPSAEPTRFGAAGVG*QNHHKGHGKSCSAH
Trigger: GTGTGCTGAACAAGACTTACCATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CTCCAGCTTCTTATGGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTTaGTTCCGTCTGCTGAGCCAACTCGCTTTGGAGCTGCTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: LQLLMAGVLLFLQSL*FRLLSQLALELLEL
Trigger: CAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCAGGAGCTGTGATGTCCATGATGAGACTTTCTAAGGCAGTGCCCTaGGCGTTGATTTCTCCCAGCAGGGCTCCTTTACTTTCCCAGTCA +
Preference number: 6 (lower is better)
Translates to: SGAVMSMMRLSKAVP*ALISPSRAPLLSQS
Trigger: TGACTGGGAAAGTAAAGGAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTGCCTTAGAAAGTCTCATCATGGACATCACAGCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CGAAACTCTTCTGCCTGTTTTAAGGCTTGCTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACACACCGTGTCCCAGCGAGTGCTAAGC +
Preference number: 6 (lower is better)
Translates to: RNSSACFKACSSRLC*ETESLHTVSQRVLS
Trigger: GCTTAGCACTCGCTGGGACACGGTGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAGAAGAGTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AACTGCTCTGCAACCCTTTTGTTCCGTCTGCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTTTGCAGAACCATCACAAAGGTCATG +
Preference number: 6 (lower is better)
Translates to: NCSATLLFRLLSQLA*ELLELVCRTITKVM
Trigger: CATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGGGTTGCAGAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp TCTCTTGGGCCTGACACAGGTGGTTTACCAGCAGCAAAGCCTACCTaGCTTTGTTCTGCAGAGTCTGCTAGTTGTATGTGGGGCATCATG +
Preference number: 6 (lower is better)
Translates to: SLGPDTGGLPAAKPT*LCSAESASCMWGIM
Trigger: CATGATGCCCCACATACAACTAGCAGACTCTGCAGAACAAAGCAAGGTAGGCTTTGCTGCTGGTAAACCACCTGTGTCAGGCCCAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp AGTAGCTGGAGTGGCAGACCATTCTGGGATGGAACTACTAACCACTaGAGTATCAGGCTTCTCTGGGGTAGGTTCTTTGAGAGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: SSWSGRPFWDGTTNH*SIRLLWGRFFESWG
Trigger: GCCCCAACTCTCAAAGAACCTACCCCAGAGAAGCCTGATACTCAAGTGGTTAGTAGTTCCATCCCAGAATGGTCTGCCACTCCAGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp TTTCTCCTGATAGCGCTCCAAATCCAAGTTTGGCTCTaGTGCTGGGTGCCGGAGCTGTTCTGCCACTTTCTT +
Preference number: 6 (lower is better)
Translates to: FLLIALQIQVWL*CWVPELFCHFL
Trigger: AAGAAAGTGGCAGAACAGCTCCGGCACCCAGCATCAGAGCCAAACTTGGATTTGGAGCGCTATCAGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CAGCTCATCCTTGAGGTACTGCTCACCAATGAGCAGTaGGAGTTCTTGGCACAGCGTCTGAGCCTCCTTAAT +
Preference number: 6 (lower is better)
Translates to: QLILEVLLTNEQ*EFLAQRLSLLN
Trigger: ATTAAGGAGGCTCAGACGCTGTGCCAAGAACTCTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp AGCTCAGCTGACTGGGCTATTCTGCCTCCTTCTGCTTaGAGCATATCCACTGTGGCCTTTCGATCATCTAGG +
Preference number: 6 (lower is better)
Translates to: SSADWAILPPSA*SISTVAFRSSR
Trigger: CCTAGATGATCGAAAGGCCACAGTGGATATGCTTCAAGCAGAAGGAGGCAGAATAGCCCAGTCAGCTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CAGTTCTCCAGCCAGCAGGTGCAGACTAAGAACCTCTaGCTCAGAAGACCTCCTCTGGAAGTCTGTAGGAAA +
Preference number: 6 (lower is better)
Translates to: QFSSQQVQTKNL*LRRPPLEVCRK
Trigger: TTTCCTACAGACTTCCAGAGGAGGTCTTCTGAGTCAGAGGTTCTTAGTCTGCACCTGCTGGCTGGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp CAGTTCAAAGCACCATTCTGTATCTTGTTTGCAATCTaGAGCAGCAATTCTAGCCTCTCCACAGCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: QFKAPFCILFAI*SSNSSLSTAGR
Trigger: GCGGCCGGCTGTGGAGAGGCTAGAATTGCTGCTGCAGATTGCAAACAAGATACAGAATGGTGCTTTGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCCACACTGGTATGGATATGCTGCTGTGTTTCCAACTaGAGCTCCACACTAGGCAGGTCATTACCCCACTCT +
Preference number: 6 (lower is better)
Translates to: STLVWICCCVSN*SSTLGRSLPHS
Trigger: AGAGTGGGGTAATGACCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CTTGAGCCTAGTTCTTCCACACTGGTATGGATATGCTaGTGTGTTTCCAACTGCAGCTCCACACTAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LEPSSSTLVWIC*CVSNCSSTLGR
Trigger: CCTGCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGGCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CAAATGCTGCAAATCCTCCTGTGTGTGCTCCTGCTCTaGAATCCTCAATGTGATGTCCTGCCTGGCATCTCT +
Preference number: 6 (lower is better)
Translates to: QMLQILLCVLLL*NPQCDVLPGIS
Trigger: AGAGATGCCAGGCAGGACATCACATTGAGGATTGCAGAGCAGGAGCACACACAGGAGGATTTGCAGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GAGGAAATCATGCGGCGGCGCTTGCCTGGAGATTTCTaGTGTGACTCCACGAAGGCTTTATATGTCATAAGC +
Preference number: 6 (lower is better)
Translates to: EEIMRRRLPGDF*CDSTKALYVIS
Trigger: GCTTATGACATATAAAGCCTTCGTGGAGTCACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGATTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCCGCTTTAGCAAGGAGTTCAGAGCTTCAGGACTGCTaGCTCCCTTATGCATACTATCCAGCTCATTCTCAG +
Preference number: 6 (lower is better)
Translates to: AALARSSELQDC*LPYAYYPAHSQ
Trigger: CTGAGAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTCTGAACTCCTTGCTAAAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ATTAGGCACTCGGTTTTCTCCTGCAGTACAGCTTTCTaGTCCTCTCCACATGTGCTGAAGATTTCCCCACGG +
Preference number: 6 (lower is better)
Translates to: IRHSVFSCSTAF*SSPHVLKISPR
Trigger: CCGTGGGGAAATCTTCAGCACATGTGGAGAGGAGCAGAAAGCTGTACTGCAGGAGAAAACCGAGTGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CCCATCCACCTTCACTACAGAACATGGCAGCGACAGTaGCATTTCCTCCCTGATTTCAGAAATGGCCGGAAT +
Preference number: 6 (lower is better)
Translates to: PIHLHYRTWQRQ*HFLPDFRNGRN
Trigger: ATTCCGGCCATTTCTGAAATCAGGGAGGAAATGGCACTGTCGCTGCCATGTTCTGTAGTGAAGGTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CAGCTAAGGTTTGTTTCCAAGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: QLRFVSKQAPEN*SIPGRLACGFL
Trigger: GAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTGCTTGGAAACAAACCTTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS GCA 72 bp AGCTGCCTCGTTCAGCTGCTCATGCTGCTGCCTTCGTaGTTCAAATTCCTTCAGCATAAACTGCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SCLVQLLMLLPS*FKFLQHKLLLL
Trigger: CAGAAGCAGCAGTTTATGCTGAAGGAATTTGAAGCACGAAGGCAGCAGCATGAGCAGCTGAACGAGGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS GCA 72 bp TTCATGGCCCTGGGCCAGGTTGCACTTGAGAATCTGTaGTCCTGCATTTCATCTGTGTTACCACTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: FMALGQVALENL*SCISSVLPLAA
Trigger: AGCAGCAAGTGGTAACACAGATGAAATGCAGGAGCACAGATTCTCAAGTGCAACCTGGCCCAGGGCCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp TTGGCCTGTAGCTCCTCAGTTATGGCATCCATGTTCTaGTTGAGCCCAGCCTTCTCATCTCGGATCTCATCT +
Preference number: 6 (lower is better)
Translates to: LACSSSVMASMF*LSPAFSSRISS
Trigger: AGATGAGATCCGAGATGAGAAGGCTGGGCTCAACCAGAACATGGATGCCATAACTGAGGAGCTACAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GAACTCCTGCTGTGCAACCTCAGCTTGATGTACAAGTaGGGAAGCATCCGATCCATCTGGAGCATCTTCTAC +
Preference number: 6 (lower is better)
Translates to: ELLLCNLSLMYK*GSIRSIWSIFY
Trigger: GTAGAAGATGCTCCAGATGGATCGGATGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACAGCAGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TTGTTAAGGAAGAGCCGTACGTCCTCAATTTGTGACTaGAGGCTATCCGTGTCTCTGCCAATGGCTCCCATG +
Preference number: 6 (lower is better)
Translates to: LLRKSRTSSICD*RLSVSLPMAPM
Trigger: CATGGGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACGTACGGCTCTTCCTTAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GCAGGCGAGAGGACAGGTTCTCCAGGGTCTCCAACATaGGTTCAATTTTATCATGAAACTGAGCAGACTGGG +
Preference number: 6 (lower is better)
Translates to: AGERTGSPGSPT*VQFYHETEQTG
Trigger: CCCAGTCTGCTCAGTTTCATGATAAAATTGAACCCATGTTGGAGACCCTGGAGAACCTGTCCTCTCGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTGTTCTCGGGATCAATGAGGCCAGACATGATAATCTaGGATTCCAGGAGCACAAGGCCTGTGTCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: LFSGSMRPDMII*DSRSTRPVSWS
Trigger: TGACCAAGACACAGGCCTTGTGCTCCTGGAATCCCAGATTATCATGTCTGGCCTCATTGATCCCGAGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp ATCCAGGGCATTTTCTACCATGGGTACTACAGCAGCTaGGACAGGCCTCTGTTGGCTGGATATCCATTCTTC +
Preference number: 6 (lower is better)
Translates to: IQGIFYHGYYSS*DRPLLAGYPFF
Trigger: GAAGAATGGATATCCAGCCAACAGAGGCCTGTCCCAGCTGCTGTAGTACCCATGGTAGAAAATGCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp ATCTCTGTCAGTCTTGGAGCTGGCTGGAGACTGAATTaGTTTGAGCAGTCTCTGCTCACACTCCTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: ISVSLGAGWRLN*FEQSLLTLLQE
Trigger: CTCCTGGAGGAGTGTGAGCAGAGACTGCTCAAACAAATTCAGTCTCCAGCCAGCTCCAAGACTGACAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCTTCTCTACCATCAGGTTCAGCTCTGAGCGCAGAGTaGTGGCACTTGAACCTGATGGAGACTGCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SSLPSGSALSAE*WHLNLMETAGE
Trigger: TTCTCCAGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGCGCTCAGAGCTGAACCTGATGGTAGAGAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CGTCTGCTGAGCCAACTCGCTTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACAAAGGTCATGGTAAGT +
Preference number: 6 (lower is better)
Translates to: RLLSQLALELLE*VCRTITKVMVS
Trigger: ACTTACCATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CAGAGTCTTTTGTTCCGTCTGCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTTTGCAGAACCATCACA +
Preference number: 6 (lower is better)
Translates to: QSLLFRLLSQLA*ELLELVCRTIT
Trigger: TGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp ACTCTGAATGTCACCCTGCAAATCCTTCAAGTCACTTaGGTTCTGCTGCAGAGCAGGGAGCTCTTGCCGAGA +
Preference number: 6 (lower is better)
Translates to: TLNVTLQILQVT*VLLQSRELLPR
Trigger: TCTCGGCAAGAGCTCCCTGCTCTGCAGCAGAACCAAAGTGACTTGAAGGATTTGCAGGGTGACATTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCCATGATGAGACTTTCTAAGGCAGTGCCCTTGGCGTaGATTTCTCCCAGCAGGGCTCCTTTACTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SMMRLSKAVPLA*ISPSRAPLLSQ
Trigger: CTGGGAAAGTAAAGGAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTGCCTTAGAAAGTCTCATCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp AGGGCGACTGTCTCCAAACGCTTCTTCAGCTCATCCTaGAGGTACTGCTCACCAATGAGCAGTGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: RATVSKRFFSSS*RYCSPMSSESS
Trigger: AGAACTCTCACTGCTCATTGGTGAGCAGTACCTCAAGGATGAGCTGAAGAAGCGTTTGGAGACAGTCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp AGCCACCCAGTTAGTTCCTCATATGTAGAGTGGAACTaGGTGGCCAGCTGCCGGGCTTGTTCTAAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: SHPVSSSYVEWN*VASCRACSKVL
Trigger: CAGAACTTTAGAACAAGCCCGGCAGCTGGCCACCAAGTTCCACTCTACATATGAGGAACTAACTGGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCTGCCTGTTTTAAGGCTTGCTCAAGCCGGCTTTGCTaGGAAACAGAGAGTTTACACACCGTGTCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: SACFKACSSRLC*ETESLHTVSQR
Trigger: TCGCTGGGACACGGTGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GCATGGGTGGGTTCTACACTCTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCAGGTTGTTTGCGTGTC +
Preference number: 6 (lower is better)
Translates to: AWVGSTLFLLYV*VTLSTSGCLRV
Trigger: GACACGCAAACAACCTGACGTGGACAGGGTCACCAAGACATATAAGAGGAAGAGTGTAGAACCCACCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CTCTTCCTCAGAAAGAACTGCTGCTTCCCTGCTCATTaGGACACTTTGCTCTCCACCCATCTCTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: LFLRKNCCFPAH*DTLLSTHLSPH
Trigger: GTGAGGAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp CACGATCCGACCCATCCTCTACTGCTGGTACTGAGTTaGCTTGGTCACTTTCTTCAAGGGGATCTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: HDPTHPLLLVLS*LGHFLQGDLPN
Trigger: GTTTGGCAGATCCCCTTGAAGAAAGTGACCAAGCAAACTCAGTACCAGCAGTAGAGGATGGGTCGGATCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp CACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTGTTCCGTCTGCTGAGCCAACTCGCT +
Preference number: 6 (lower is better)
Translates to: HPVAKILQLLMAGVL*FLQSLLFRLLSQLA
Trigger: AGCGAGTTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTTTTGTTCCGTCTGCTGAGCCAACTC +
Preference number: 6 (lower is better)
Translates to: SHPVAKILQLLMAGV*LFLQSLLFRLLSQL
Trigger: GAGTTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCCTTCAGCATAAACTGGACCTGCTGCTTCTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGACCAAGAACTCCCATCATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SFSINWTCCFWAFNM*GSIDKGPRTPIISS
Trigger: GGAGCTGATGATGGGAGTTCTTGGTCCCTTGTCTATTGACCCCAACATGTTGAATGCCCAGAAGCAGCAGGTCCAGTTTATGCTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AACATTTCTCGGACTCGACAGTGGAACTGCCCAATCCCCTCTAGCTaGTTTTCCATGGTCAGGCAGCTACTGCTCACTCTTTGCTTCACT +
Preference number: 6 (lower is better)
Translates to: NISRTRQWNCPIPSS*FSMVRQLLLTLCFT
Trigger: AGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAGAGGGGATTGGGCAGTTCCACTGTCGAGTCCGAGAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCAAAGGACGGCTGCAGTTTCTCCAGCTCCACGGTGGCACTTTTATaGTCACTGATGCACTCTCTGATCTTGTCGACTTCAGCAGGAATC +
Preference number: 6 (lower is better)
Translates to: SKDGCSFSSSTVALL*SLMHSLILSTSAGI
Trigger: GATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGTGGAGCTGGAGAAACTGCAGCCGTCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp ATGAAAGGTGCATGGGTGGGTTCTACACTCTTCCTCTTATATGTCTaGGTGACCCTGTCCACGTCAGGTTGTTTGCGTGTCATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MKGAWVGSTLFLLYV*VTLSTSGCLRVISS
Trigger: GGAGGAGATGACACGCAAACAACCTGACGTGGACAGGGTCACCAAGACATATAAGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CTGGTCCAACTCTTCCTCAGAAAGAACTGCTGCTTCCCTGCTCATTaGGACACTTTGCTCTCCACCCATCTCTCTCCTCACTCTTCTATC +
Preference number: 6 (lower is better)
Translates to: LVQLFLRKNCCFPAH*DTLLSTHLSPHSSI
Trigger: GATAGAAGAGTGAGGAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAGTTGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp GTCTTGTTGTTTCTGCAGAGTCTTGACCTGAACTTCTTGCTGGACTaGCTGAAGATGGCCCTGCACCACATCTTTCTGAGCTGCAGTGTG +
Preference number: 6 (lower is better)
Translates to: VLLFLQSLDLNFLLD*LKMALHHIFLSCSV
Trigger: CACACTGCAGCTCAGAAAGATGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp ATGGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTGACCTGAACTTCTaGCTGGACTTGCTGAAGATGGCCCTGCACCACATCTTTCTGAGC +
Preference number: 6 (lower is better)
Translates to: MAGVLLFLQSLDLNF*LDLLKMALHHIFLS
Trigger: GCTCAGAAAGATGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp ACTCTCTCCATGTCTACCAGATCGGGCCTGTATCGGTaGATCAATGCGTTGAACATTTTCCCATCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: TLSMSTRSGLYR*INALNIFPSLQ
Trigger: CTGGAGCGATGGGAAAATGTTCAACGCATTGATTCACCGATACAGGCCCGATCTGGTAGACATGGAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS TCA 72 bp CATCAAGATCGTATGCTGCCTGATCCAGGGAATGAGTaGGTCCACTCGGCTTTGGTATTCTTGCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: HQDRMLPDPGNE*VHSALVFLPSG
Trigger: TCCAGATGGCAAGAATACCAAAGCCGAGTGGACTCACTCATTCCCTGGATCAGGCAGCATACGATCTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS TCA 72 bp TCAGCTGTGGCTCTGGAGACAAATTTGTGCAGGCTCTaGAGGTGCCTCATTCGGAAGCTAGAAGTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: SAVALETNLCRL*RCLIRKLEVSF
Trigger: GAAGGAAACTTCTAGCTTCCGAATGAGGCACCTTCAGAGCCTGCACAAATTTGTCTCCAGAGCCACAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TGGCCATTTCAATGGCCTCCTTATTCGGTGGGGGAATaGGAAAGCAAACTGATGGAACCATTGCCTCGTTCC +
Preference number: 6 (lower is better)
Translates to: WPFQWPPYSVGE*ESKLMEPLPRS
Trigger: GGAACGAGGCAATGGTTCCATCAGTTTGCTTTCTCATTCCCCCACCGAATAAGGAGGCCATTGAAATGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp AATCATGCGGCGGCGCTTGCCTGGAGATTTCTGCTGTaGCTCCACGAAGGCTTTATATGTCATAAGCTGCAA +
Preference number: 6 (lower is better)
Translates to: NHAAALAWRFLL*LHEGFICHKLQ
Trigger: TTGCAGCTTATGACATATAAAGCCTTCGTGGAGTCACAGCAGAAATCTCCAGGCAAGCGCCGCCGCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GAGATTGTGACTGTGTTGGTCCAGGAAGGACTGAACTaGCTGGGTGGCCACAATGAAATTCTGCTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: EIVTVLVQEGLN*LGGHNEILLLR
Trigger: TCTCAGCAGCAGAATTTCATTGTGGCCACCCAGTCAGTTCAGTCCTTCCTGGACCAACACAGTCACAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TTCTGGAAGCGGCTGGATATGGAATCTGTAGTTTCTTaGATAGGCCTACAGTCCAGGGCTGGCTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: FWKRLDMESVVS*IGLQSRAGSPS
Trigger: TGAAGGAGAGCCAGCCCTGGACTGTAGGCCTATTCAAGAAACTACAGATTCCATATCCAGCCGCTTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CCTGTAGCTCCTCAGTTATGGCATCCATGTTCTGGTTaGGCCCAGCCTTCTCATCTCGGATCTCATCTTCAT +
Preference number: 6 (lower is better)
Translates to: PVAPQLWHPCSG*AQPSHLGSHLH
Trigger: ATGAAGATGAGATCCGAGATGAGAAGGCTGGGCTCAACCAGAACATGGATGCCATAACTGAGGAGCTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GATTTTGTTAAGGAAGAGCCGTACGTCCTCAATTTGTaGCTGGAGGCTATCCGTGTCTCTGCCAATGGCTCC +
Preference number: 6 (lower is better)
Translates to: DFVKEEPYVLNL*LEAIRVSANGS
Trigger: GGAGCCATTGGCAGAGACACGGATAGCCTCCAGTCACAAATTGAGGACGTACGGCTCTTCCTTAACAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TATCTTCCAGCTGTTTTTGCCTGGCTGCTGCCTTGCTaGGGAGATCAGTCCATCTACGTTCAAGACTCTCCA +
Preference number: 6 (lower is better)
Translates to: YLPAVFAWLLPC*GDQSIYVQDSP
Trigger: TGGAGAGTCTTGAACGTAGATGGACTGATCTCCTCAGCAAGGCAGCAGCCAGGCAAAAACAGCTGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TCAAGGACTTTCTGCTACCACTGCGGGATTTCTCCATaGAAGGTGCATGGGTGGGTTCTACACTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SRTFCYHCGISP*KVHGWVLHSSS
Trigger: AGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCATGGAGAAATCCCGCAGTGGTAGCAGAAAGTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TTACACCTTCAATCCCCTTCCCACTGGGTATGGCCATaGAGGGGCCTTGTTCATCTCCAAGGATCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: LHLQSPSHWVWP*RGLVHLQGSLC
Trigger: ACAAAGAGATCCTTGGAGATGAACAAGGCCCCTTCATGGCCATACCCAGTGGGAAGGGGATTGAAGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp ATGCTCACAGTGATGCCACTGACAGATAAATCACTCTaGGAAGCAGGCATTATGGGACCCTTGCAGGACACG +
Preference number: 6 (lower is better)
Translates to: MLTVMPLTDKSL*EAGIMGPLQDT
Trigger: CGTGTCCTGCAAGGGTCCCATAATGCCTGCTTCTCAGAGTGATTTATCTGTCAGTGGCATCACTGTGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS TCA 72 bp ACAGTGCTGCGCAGAATACGGACCAGCCGCAACTGCTaGGAATCTCCAAACCGGTATTTATTCTCTCCAATC +
Preference number: 6 (lower is better)
Translates to: TVLRRIRTSRNC*ESPNRYLFSPI
Trigger: GATTGGAGAGAATAAATACCGGTTTGGAGATTCTCAGCAGTTGCGGCTGGTCCGTATTCTGCGCAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
CDS GCA 72 bp ACACTTGAGCCTAGTTCTTCCACACTGGTATGGATATaGTGCTGTGTTTCCAACTGCAGCTCCACACTAGGC +
Preference number: 6 (lower is better)
Translates to: TLEPSSSTLVWI*CCVSNCSSTLG
Trigger: GCCTAGTGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGGCTCAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AACACTGAATTCTTGTCCTTCACATCACTAAGCCAGTaGTGTAAGGTGGTCCGATGGGACTCCAGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: NTEFLSFTSLSQ*CKVVRWDSRAE
Trigger: CTCAGCTCTGGAGTCCCATCGGACCACCTTACAGCACTGGCTTAGTGATGTGAAGGACAAGAATTCAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CCGTGTCCGTTCCTGGAGAACCTCATATTGCTCCTTTaGCTGATGAAGTTTTTCTCGAAGAGCTGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: PCPFLENLILLL*LMKFFSKSCQL
Trigger: GAGCTGACAGCTCTTCGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAGGAACGGACACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCTAAGGTTTGTTTTTCCAAGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: AKVCFSKQAPEN*SIPGRLACGFL
Trigger: GAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTGCTTGGAAAAACAAACCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CTTGCCGCTTTAGCAAGGAGTTCAGAGCTTCAGGACTaGTGCCTCCCTTATGCATACTATCCAGCTCATTCT +
Preference number: 6 (lower is better)
Translates to: LAALARSSELQD*CLPYAYYPAHS
Trigger: AGAATGAGCTGGATAGTATGCATAAGGGAGGCAGCAGTCCTGAAGCTCTGAACTCCTTGCTAAAGCGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CTCCATACTTTCCTGAACACTCTGAGACTGAGCAATTaGCTTCTGCAGCAAAGCAGACCGCTCATCCAAGCT +
Preference number: 6 (lower is better)
Translates to: LHTFLNTLRLSN*LLQQSRPLIQA
Trigger: AGCTTGGATGAGCGGTCTGCTTTGCTGCAGAAGGCAATTGCTCAGTCTCAGAGTGTTCAGGAAAGTATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AAATCAGACCGAATCTCACTGGTCTCCTCTAGCTGTTaGTTTACAGCTTCAGGTTGGGTGCTGATGGCTGAC +
Preference number: 6 (lower is better)
Translates to: KSDRISLVSSSC*FTASGWVLMAD
Trigger: GTCAGCCATCAGCACCCAACCTGAAGCTGTAAAGCAACAGCTAGAGGAGACCAGTGAGATTCGGTCTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGGAGATCAGTCCATCTACGTTCAAGACTCTCCAGCTaGCCAGTGATTTTCTCTCTATCAGCCAGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: RRSVHLRSRLSS*PVIFSLSASSA
Trigger: AGCTGAGCTGGCTGATAGAGAGAAAATCACTGGGCAGCTGGAGAGTCTTGAACGTAGATGGACTGATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCTTCTGCCTGTTTTAAGGCTTGCTCAAGCCGGCTTTaGTTGGAAACAGAGAGTTTACACACCGTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SSACFKACSSRL*LETESLHTVSQ
Trigger: CTGGGACACGGTGTGTAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ATCAGGAAGGGCTCCTCGAAAGCGAAGTGTTTGTTCTaGTTCAGAAAGCCACTCCAACAGCATATGGACCGT +
Preference number: 6 (lower is better)
Translates to: IRKGSSKAKCLF*FRKPLQQHMDR
Trigger: ACGGTCCATATGCTGTTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGAGGAGCCCTTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AACTTCCTGGTCCAACTCTTCCTCAGAAAGAACTGCTaGTTCCCTGCTCATTTGGACACTTTGCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: NFLVQLFLRKNC*FPAHLDTLLST
Trigger: GGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAGTTGGACCAGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CTGATTTCAGAAATGGCCGGAATGACAGCATCATGCTaGCGTATATTCTCACTCTGCACTGTCCTTGTGGGC +
Preference number: 6 (lower is better)
Translates to: LISEMAGMTASC*RIFSLCTVLVG
Trigger: GCCCACAAGGACAGTGCAGAGTGAGAATATACGGCAGCATGATGCTGTCATTCCGGCCATTTCTGAAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CAGCTAAGGTTTGTTTTTCAGCAAGCTCCAGAGAACTaGTCCATTCCTGGAAGGCTAGCCTGTGGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: QLRFVFQQAPEN*SIPGRLACGFL
Trigger: GAGAAAGCCACAGGCTAGCCTTCCAGGAATGGAGCAGTTCTCTGGAGCTTGCTGAAAAACAAACCTTAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CCA 72 bp CTGCGGTCGCAGGTATATTTTCGTTTGATGGAGTCTTaGAGGTTTCTCAGAAATGACTCCAGGTCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: LRSQVYFRLMES*RFLRNDSRSRA
Trigger: TGCCCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGCGACCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCCTCATTCTCCAGTGATTTCATCAGGTGCTGGAAGTaGGCTTTACAAGCTTCCACCTCCTCCTCTATTCGC +
Preference number: 6 (lower is better)
Translates to: SSFSSDFIRCWK*ALQASTSSSIR
Trigger: GCGAATAGAGGAGGAGGTGGAAGCTTGTAAAGCCCACTTCCAGCACCTGATGAAATCACTGGAGAATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTGTCAGCTGTCTCCATGAATCGAGTGACCATGTCATaGGTGGCTTCCAAGCTGCTCTTTTGTCTAGCAATG +
Preference number: 6 (lower is better)
Translates to: LSAVSMNRVTMS*VASKLLFCLAM
Trigger: CATTGCTAGACAAAAGAGCAGCTTGGAAGCCACCCATGACATGGTCACTCGATTCATGGAGACAGCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTGGATCTGCTGGGAAAAATGTGCAATATCTTGATCTaGCTGGTTCCCAGAGGCCAGCAGTCGGCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: LDLLGKMCNILI*LVPRGQQSAFV
Trigger: AACAAAAGCCGACTGCTGGCCTCTGGGAACCAGCCAGATCAAGATATTGCACATTTTTCCCAGCAGATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp AGCTTGATGTACAAGTGGGGAAGCATCCGATCCATCTaGAGCATCTTCTACGAGTCCCTGAGTGAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: SLMYKWGSIRSI*SIFYESLSEVP
Trigger: AGGAACTTCACTCAGGGACTCGTAGAAGATGCTCCAGATGGATCGGATGCTTCCCCACTTGTACATCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCTTCCTCAGAAAGAACTGCTGCTTCCCTGCTCATTTaGACACTTTGCTCTCCACCCATCTCTCTCCTCACT +
Preference number: 6 (lower is better)
Translates to: SSSERTAASLLI*TLCSPPISLLT
Trigger: AGTGAGGAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp CCGAGTAAACACATTCTGAGTTGCTCTGCAAGGCTCTaGGTTTACACCTTCAATCCCCTTCCCACTGGGTAT +
Preference number: 6 (lower is better)
Translates to: PSKHILSCSARL*VYTFNPLPTGY
Trigger: ATACCCAGTGGGAAGGGGATTGAAGGTGTAAACCCAGAGCCTTGCAGAGCAACTCAGAATGTGTTTACTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TGTCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATaGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTGACC +
Preference number: 6 (lower is better)
Translates to: CPTQLQRSSSFL*QVSCCFCRVLT
Trigger: GGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCCGACCCATCCTCTACTGCTGGTACTGAGTTTGCTTaGTCACTTTCTTCAAGGGGATCTGCCAAACTAGTC +
Preference number: 6 (lower is better)
Translates to: SDPSSTAGTEFA*SLSSRGSAKLV
Trigger: GACTAGTTTGGCAGATCCCCTTGAAGAAAGTGACCAAGCAAACTCAGTACCAGCAGTAGAGGATGGGTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp TGCAGACTAAGAACCTCTGACTCAGAAGACCTCCTCTaGAAGTCTGTAGGAAACTGTGCTGGAGCTCCATTC +
Preference number: 6 (lower is better)
Translates to: CRLRTSDSEDLL*KSVGNCAGAPF
Trigger: GAATGGAGCTCCAGCACAGTTTCCTACAGACTTCCAGAGGAGGTCTTCTGAGTCAGAGGTTCTTAGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp ATAACCTCAGGGCTGAGGAGCTGGAGGTCAGGACAATaGCTGTCCTTGACAGCTTTACTGTTTATCAACCAG +
Preference number: 6 (lower is better)
Translates to: ITSGLRSWRSGQ*LSLTALLFINQ
Trigger: CTGGTTGATAAACAGTAAAGCTGTCAAGGACAGCCATTGTCCTGACCTCCAGCTCCTCAGCCCTGAGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000123765.8
ENSMUST00000149022.8
CDS CAA 72 bp GCTGAGCCAACTCGCTTTGGAGCTGCTGGAGTTGGTTaGCAGAACCATCACAAAGGTCATGGTAAGTCTTGT +
Preference number: 6 (lower is better)
Translates to: AEPTRFGAAGVG*QNHHKGHGKSC
Trigger: ACAAGACTTACCATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CTTATGGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTTaGTTCCGTCTGCTGAGCCAACTCGCTTTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LMAGVLLFLQSL*FRLLSQLALEL
Trigger: CAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CCCGTGTCCGTTCCTGGAGAACCTCATATTGCTCCTTaGCCTGATGAAGTTTTTCTCGAAGAGCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: PVSVPGEPHIAP*PDEVFLEELSA
Trigger: AGCTGACAGCTCTTCGAGAAAAACTTCATCAGGCAAAGGAGCAATATGAGGTTCTCCAGGAACGGACACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GTGATGTCCATGATGAGACTTTCTAAGGCAGTGCCCTaGGCGTTGATTTCTCCCAGCAGGGCTCCTTTACTT +
Preference number: 6 (lower is better)
Translates to: VMSMMRLSKAVP*ALISPSRAPLL
Trigger: AAGTAAAGGAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTGCCTTAGAAAGTCTCATCATGGACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CCACTTCTGACTGATGCTTTGCAGATCTTTGTGTACTaGGCTGGCAGATGGAGACATATCTCCAGGACCCGT +
Preference number: 6 (lower is better)
Translates to: PLLTDALQIFVY*AGRWRHISRTR
Trigger: ACGGGTCCTGGAGATATGTCTCCATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCATCAGTCAGAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TTACCACACTGCTTATTAAGGGCTTCTAGCTCCCTCTaGAGACCCAGTAAGTCTAACGTCCCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LPHCLLRASSSL*RPSKSNVPSSS
Trigger: GGAGGAAGAGGGGACGTTAGACTTACTGGGTCTCAAGAGGGAGCTAGAAGCCCTTAATAAGCAGTGTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GTGGCACTTTTATTGTCACTGATGCACTCTCTGATCTaGTCGACTTCAGCAGGAATCAGGGGAGGCATTCGC +
Preference number: 6 (lower is better)
Translates to: VALLLSLMHSLI*STSAGIRGGIR
Trigger: GCGAATGCCTCCCCTGATTCCTGCTGAAGTCGACAAGATCAGAGAGTGCATCAGTGACAATAAAAGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GGCTGCAGTTTCTCCAGCTCCACGGTGGCACTTTTATaGTCACTGATGCACTCTCTGATCTTGTCGACTTCA +
Preference number: 6 (lower is better)
Translates to: GCSFSSSTVALL*SLMHSLILSTS
Trigger: TGAAGTCGACAAGATCAGAGAGTGCATCAGTGACAATAAAAGTGCCACCGTGGAGCTGGAGAAACTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCCAGCTTGTCCTGGATTTCTTTTGCAGCCAGATCCTaGTCTGCTCCCTGCGATCTTCCAATGAGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSLSWISFAARS*SAPCDLPMSSS
Trigger: AGAGGAACTCATTGGAAGATCGCAGGGAGCAGACAAGGATCTGGCTGCAAAAGAAATCCAGGACAAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CGTGTCATCAGGAAGGGCTCCTCGAAAGCGAAGTGTTaGTTCTGCTTCAGAAAGCCACTCCAACAGCATATG +
Preference number: 6 (lower is better)
Translates to: RVIRKGSSKAKC*FCFRKPLQQHM
Trigger: CATATGCTGTTGGAGTGGCTTTCTGAAGCAGAACAAACACTTCGCTTTCGAGGAGCCCTTCCTGATGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CGCCACCGTCTGACCATCTGCAACACTCTGTCCTTCTaGGCTTTGTTTGTGGCCATCCTTAACCAAAAGTTC +
Preference number: 6 (lower is better)
Translates to: RHRLTICNTLSF*ALFVAILNQKF
Trigger: GAACTTTTGGTTAAGGATGGCCACAAACAAAGCCAAGAAGGACAGAGTGTTGCAGATGGTCAGACGGTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp CATCATGCTGCCGTATATTCTCACTCTGCACTGTCCTaGTGGGCAGTTTCTCCGGAAGAAGAGATGCCAAGA +
Preference number: 6 (lower is better)
Translates to: HHAAVYSHSALS*WAVSPEEEMPR
Trigger: TCTTGGCATCTCTTCTTCCGGAGAAACTGCCCACAAGGACAGTGCAGAGTGAGAATATACGGCAGCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TTTCTGCAGAGTCTTGACCTGAACTTCTTGCTGGACTaGCTGAAGATGGCCCTGCACCACATCTTTCTGAGC +
Preference number: 6 (lower is better)
Translates to: FLQSLDLNFLLD*LKMALHHIFLS
Trigger: GCTCAGAAAGATGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GTCTTGTTGTTTCTGCAGAGTCTTGACCTGAACTTCTaGCTGGACTTGCTGAAGATGGCCCTGCACCACATC +
Preference number: 6 (lower is better)
Translates to: VLLFLQSLDLNF*LDLLKMALHHI
Trigger: GATGTGGTGCAGGGCCATCTTCAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp ATGAAGGACTTCCACGATCTCCTGTTAACATTATCTTaGCGTTCTGCATTTGGCCGACGTCTGGGTGGCACG +
Preference number: 6 (lower is better)
Translates to: MKDFHDLLLTLS*RSAFGRRLGGT
Trigger: CGTGCCACCCAGACGTCGGCCAAATGCAGAACGCAAAGATAATGTTAACAGGAGATCGTGGAAGTCCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp TGGAGGAACTTTTCATGGCCCTGGGCCAGGTTGCACTaGAGAATCTGTGCTCCTGCATTTCATCTGTGTTAC +
Preference number: 6 (lower is better)
Translates to: WRNFSWPWARLH*RICAPAFHLCY
Trigger: GTAACACAGATGAAATGCAGGAGCACAGATTCTCAAGTGCAACCTGGCCCAGGGCCATGAAAAGTTCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp CTTTTGTTCCGTCTGCTGAGCCAACTCGCTTTGGAGCTGCTGGAGTaGGTTTGCAGAACCATCACAAAGGTCATGGTAAGTCTTGTTCAG +
Preference number: 6 (lower is better)
Translates to: LLFRLLSQLALELLE*VCRTITKVMVSLVQ
Trigger: CTGAACAAGACTTACCATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TTGTTTCTGCAGAGTCTTTTGTTCCGTCTGCTGAGCCAACTCGCTTaGGAGCTGCTGGAGTTGGTTTGCAGAACCATCACAAAGGTCATG +
Preference number: 6 (lower is better)
Translates to: LFLQSLLFRLLSQLA*ELLELVCRTITKVM
Trigger: CATGACCTTTGTGATGGTTCTGCAAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GCTGTGATGTCCATGATGAGACTTTCTAAGGCAGTGCCCTTGGCGTaGATTTCTCCCAGCAGGGCTCCTTTACTTTCCCAGTCAGATATA +
Preference number: 6 (lower is better)
Translates to: AVMSMMRLSKAVPLA*ISPSRAPLLSQSDI
Trigger: TATATCTGACTGGGAAAGTAAAGGAGCCCTGCTGGGAGAAATCAACGCCAAGGGCACTGCCTTAGAAAGTCTCATCATGGACATCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GGAGTTGAGCTTGTCAGTGAGCTCAACCCACTTCTGACTGATGCTTaGCAGATCTTTGTGTACTTGGCTGGCAGATGGAGACATATCTCC +
Preference number: 6 (lower is better)
Translates to: GVELVSELNPLLTDA*QIFVYLAGRWRHIS
Trigger: GGAGATATGTCTCCATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCTCACTGACAAGCTCAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCGCTCTTCAGACCGTGCTTTGATGTCCTCCCAGAAGAACACCATTaGATCCAGCTTGTCCTGGATTTCTTTTGCAGCCAGATCCTTGTC +
Preference number: 6 (lower is better)
Translates to: SLFRPCFDVLPEEHH*IQLVLDFFCSQILV
Trigger: GACAAGGATCTGGCTGCAAAAGAAATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CTCTTCCTCAGAAAGAACTGCTGCTTCCCTGCTCATTTGGACACTTaGCTCTCCACCCATCTCTCTCCTCACTCTTCTATCAACCCTTAC +
Preference number: 6 (lower is better)
Translates to: LFLRKNCCFPAHLDT*LSTHLSPHSSINPY
Trigger: GTAAGGGTTGATAGAAGAGTGAGGAGAGAGATGGGTGGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTGACCTGAACTTCTTGCTGGACTTGCTG +
Preference number: 6 (lower is better)
Translates to: HPVAKILQLLMAGVL*FLQSLDLNFLLDLL
Trigger: CAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp TCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTTGACCTGAACTTCTTGCTGGACTTG +
Preference number: 6 (lower is better)
Translates to: SHPVAKILQLLMAGV*LFLQSLDLNFLLDL
Trigger: CAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp AGATCAGGCCCAGCGTTAGCTTGGGATTGCCATCTGTaGTGTCATCATTGCGGATATTCACTAGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: RSGPALAWDCHL*CHHCGYSLASP
Trigger: AGGTGAAGCTAGTGAATATCCGCAATGATGACATCACAGATGGCAATCCCAAGCTAACGCTGGGCCTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS TCA 72 bp TCCCATCGCTCCAGCAGGAAGAAAAGTTGGTGCATTTaGCTCCTGTGTAACCAGCTGTTACTTTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: SHRSSRKKSWCI*LLCNQLLLSES
Trigger: GGACTCAGAAAGTAACAGCTGGTTACACAGGAGTCAAATGCACCAACTTTTCTTCCTGCTGGAGCGATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS TCA 72 bp CTACCAGATCGGGCCTGTATCGGTGAATCAATGCGTTaGACATTTTCCCATCGCTCCAGCAGGAAGAAAAGT +
Preference number: 6 (lower is better)
Translates to: LPDRACIGESMR*TFSHRSSRKKS
Trigger: ACTTTTCTTCCTGCTGGAGCGATGGGAAAATGTTCAACGCATTGATTCACCGATACAGGCCCGATCTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS TCA 72 bp TCTTGTTGTTTCTGCAGAGTCTTTTGTTCCGTCTGCTaGGCCAACTCGCTTTGGAGCTGCTGGAGTTGGTTT +
Preference number: 6 (lower is better)
Translates to: SCCFCRVFCSVC*ANSLWSCWSWF
Trigger: AAACCAACTCCAGCAGCTCCAAAGCGAGTTGGCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GCTTCAGTTTCATGTTGTTGGCCAAGGCTTCTTGGATaGCTCCTGATGAGAGTGATGCCACCTGATCCCTTT +
Preference number: 6 (lower is better)
Translates to: ASVSCCWPRLLG*LLMRVMPPDPF
Trigger: AAAGGGATCAGGTGGCATCACTCTCATCAGGAGTCATCCAAGAAGCCTTGGCCAACAACATGAAACTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TTCACTTCTAAGAACTCCTGCTGTGCAACCTCAGCTTaGTGTACAAGTGGGGAAGCATCCGATCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: FTSKNSCCATSA*CTSGEASDPSG
Trigger: TCCAGATGGATCGGATGCTTCCCCACTTGTACATCAAGCTGAGGTTGCACAGCAGGAGTTCTTAGAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GACCGTGCTTTGATGTCCTCCCAGAAGAACACCATTTaGTCCAGCTTGTCCTGGATTTCTTTTGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: DRALMSSQKNTI*SSLSWISFAAR
Trigger: TCTGGCTGCAAAAGAAATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTGGGAGGACATCAAAGCACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CTATCCCCTGTGACAGTGTCAATGATGCCTCCTGTCTaGAGCTGCCTTATGAGAATAGCGCAAGCCATATCT +
Preference number: 6 (lower is better)
Translates to: LSPVTVSMMPPV*SCLMRIAQAIS
Trigger: AGATATGGCTTGCGCTATTCTCATAAGGCAGCTTCAGACAGGAGGCATCATTGACACTGTCACAGGGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CCTGTGGCCATGTCTATGATTCCACCAGTGTTCGCCTaGGCTTCCAAAACCTTCAATGCAGAAGCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: PVAMSMIPPVFA*ASKTFNAEAKS
Trigger: AGACTTTGCTTCTGCATTGAAGGTTTTGGAAGCTCAGGCGAACACTGGTGGAATCATAGACATGGCCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CTGTCCAGTGTCTCTGGTACCTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAGGTTTGTTTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: LSSVSGTWFTST*PSVAAKVCFQA
Trigger: TGCTTGGAAACAAACCTTAGCTGCCACTGATGGTCATGTAGATGTGAACCAGGTACCAGAGACACTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS TCA 72 bp TCAATGACTCCAGTGCCTTCCAAAGCTTCCTCCCTGTaGGATGCTTCTGGAGTAAGGATTTTCTTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: SMTPVPSKASSL*DASGVRIFFPL
Trigger: GAGAGGGAAGAAAATCCTTACTCCAGAAGCATCTCACAGGGAGGAAGCTTTGGAAGGCACTGGAGTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS TCA 72 bp TCGCTGTTAACTTCGTTAGGGTTTCAGTCTCTTCAATaGCTCCAGTGCCTTCCAAAGCTTCCTCCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: SLLTSLGFQSLQ*LQCLPKLPPCE
Trigger: CTCACAGGGAGGAAGCTTTGGAAGGCACTGGAGTCATTGAAGAGACTGAAACCCTAACGAAGTTAACAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS TCA 72 bp GTGGCAGACCATTCTGGGATGGAACTACTAACCACTTaGGTATCAGGCTTCTCTGGGGTAGGTTCTTTGAGA +
Preference number: 6 (lower is better)
Translates to: VADHSGMELLTT*VSGFSGVGSLR
Trigger: TCTCAAAGAACCTACCCCAGAGAAGCCTGATACTCAAGTGGTTAGTAGTTCCATCCCAGAATGGTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp TGTTGTTCAACACACAAGCACAGCTGCTTCATCCATTaGAACTGGGACTGGACAGCAGCACTATATGCCTCT +
Preference number: 6 (lower is better)
Translates to: CCSTHKHSCFIH*NWDWTAALYAS
Trigger: AGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CAGTTTTCAAATTCCTTGTGGTCTTGCAGGAACTTCTaGAGTTCATCTCGTAGAGCCTGCGTCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: QFSNSLWSCRNF*SSSRRACVCFS
Trigger: GCTGAAGCAGACGCAGGCTCTACGAGATGAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCCCCTCTAGCTTGTTTTCCATGGTCAGGCAGCTACTaGTCACTCTTTGCTTCACTTCTAAGAACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SPLACFPWSGSY*SLFASLLRTPA
Trigger: AGCAGGAGTTCTTAGAAGTGAAGCAAAGAGTGAGCAGTAGCTGCCTGACCATGGAAAACAAGCTAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ACCGTGTCCCGAAACTCTTCTGCCTGTTTTAAGGCTTaGTCAAGCCGGCTTTGCTTGGAAACAGAGAGTTTA +
Preference number: 6 (lower is better)
Translates to: TVSRNSSACFKA*SSRLCLETESL
Trigger: TAAACTCTCTGTTTCCAAGCAAAGCCGGCTTGAGCAAGCCTTAAAACAGGCAGAAGAGTTTCGGGACACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AAGTCACCCTTCAATTCACATACTCCAGTCCCACCTTaGTCTGCTAAGGGATCTACTTGGATCATAGCTGCC +
Preference number: 6 (lower is better)
Translates to: KSPFNSHTPVPP*SAKGSTWIIAA
Trigger: GGCAGCTATGATCCAAGTAGATCCCTTAGCAGAGCAAGGTGGGACTGGAGTATGTGAATTGAAGGGTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp TGTAACTTCCTGGTCCAACTCTTCCTCAGAAAGAACTaGTGCTTCCCTGCTCATTTGGACACTTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: CNFLVQLFLRKN*CFPAHLDTLLS
Trigger: GGAGAGCAAAGTGTCCAAATGAGCAGGGAAGCAGCAGTTCTTTCTGAGGAAGAGTTGGACCAGGAAGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp TCCCTGATTTCAGAAATGGCCGGAATGACAGCATCATaGTGCCGTATATTCTCACTCTGCACTGTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: SLISEMAGMTAS*CRIFSLCTVLV
Trigger: CACAAGGACAGTGCAGAGTGAGAATATACGGCAGCATGATGCTGTCATTCCGGCCATTTCTGAAATCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CACCAGTTGGCTCACAGACTTCTCACAGTTCCTTTCTaGTGGGTTATCAAGCAGGTGAGCAATGACTGTCAT +
Preference number: 6 (lower is better)
Translates to: HQLAHRLLTVPF*WVIKQVSNDCH
Trigger: ATGACAGTCATTGCTCACCTGCTTGATAACCCAGCAGAAAGGAACTGTGAGAAGTCTGTGAGCCAACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CCA 72 bp GCAGCACTATATGCCTCTACTGTTTGCTTAGCTGGGTaGTTCTCAAGTGACAACACCTCCGCTGTATCTTGT +
Preference number: 6 (lower is better)
Translates to: AALYASTVCLAG*FSSDNTSAVSC
Trigger: ACAAGATACAGCGGAGGTGTTGTCACTTGAGAACCACCCAGCTAAGCAAACAGTAGAGGCATATAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CACAAGCACAGCTGCTTCATCCATTGCAACTGGGACTaGACAGCAGCACTATATGCCTCTACTGTTTGCTTA +
Preference number: 6 (lower is better)
Translates to: HKHSCFIHCNWD*TAALYASTVCL
Trigger: TAAGCAAACAGTAGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCAACACACAAGCACAGCTGCTTCATCCATTGCAACTaGGACTGGACAGCAGCACTATATGCCTCTACTGTT +
Preference number: 6 (lower is better)
Translates to: STHKHSCFIHCN*DWTAALYASTV
Trigger: AACAGTAGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GCACATGGTCTGGATTGCGTGGCTTTAGCTGAACAATaGTTTTTGATCTCCCAACAAGACTGGCAACGGAAC +
Preference number: 6 (lower is better)
Translates to: AHGLDCVALAEQ*FLISQQDWQRN
Trigger: GTTCCGTTGCCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TGCCCTGAGATAGTCACAAATCTCAAGTCTCCTTTGTaGGAAATGACATCCTCAGAGAAGCTTCCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: CPEIVTNLKSPL*EMTSSEKLPCR
Trigger: GCGGCAAGGAAGCTTCTCTGAGGATGTCATTTCCCACAAAGGAGACTTGAGATTTGTGACTATCTCAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTGCTACCACTGCGGGATTTCTCCATGAAAGGTGCATaGGTGGGTTCTACACTCTTCCTCTTATATGTCTTG +
Preference number: 6 (lower is better)
Translates to: LLPLRDFSMKGA*VGSTLFLLYVL
Trigger: CAAGACATATAAGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCATGGAGAAATCCCGCAGTGGTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTTAGGTATCTTCCCATCCACCTTCACTACAGAACATaGCAGCGACAGTGCCATTTCCTCCCTGATTTCAGA +
Preference number: 6 (lower is better)
Translates to: LRYLPIHLHYRT*QRQCHFLPDFR
Trigger: TCTGAAATCAGGGAGGAAATGGCACTGTCGCTGCCATGTTCTGTAGTGAAGGTGGATGGGAAGATACCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCTCTGGTACCTGGTTCACATCTACATGACCATCAGTaGCAGCTAAGGTTTGTTTCCAAGCAAGCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SLVPGSHLHDHQ*QLRFVSKQAPE
Trigger: CTCTGGAGCTTGCTTGGAAACAAACCTTAGCTGCCACTGATGGTCATGTAGATGTGAACCAGGTACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084301.12
CDS CCA 72 bp CAGTTGGCTCACAGACTTCTCACAGTTCCTTTCTGCTaGGTTATCAAGCAGGTGAGCAATGACTGTCATACC +
Preference number: 6 (lower is better)
Translates to: QLAHRLLTVPFC*VIKQVSNDCHT
Trigger: GGTATGACAGTCATTGCTCACCTGCTTGATAACCCAGCAGAAAGGAACTGTGAGAAGTCTGTGAGCCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS CCA 72 bp AGGAGAGAAAATTTCCTTAGCAGGCACTGCAGTAGCTaGAGTGGCAGACCATTCTGGGATGGAACTACTAAC +
Preference number: 6 (lower is better)
Translates to: RRENFLSRHCSS*SGRPFWDGTTN
Trigger: GTTAGTAGTTCCATCCCAGAATGGTCTGCCACTCCAGCTACTGCAGTGCCTGCTAAGGAAATTTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp TTCTGGGACATCTTTCCCTCGTACAACCTAGCCTCTTaGACACTTGAGCCTAGTTCTTCCACACTGGTATGG +
Preference number: 6 (lower is better)
Translates to: FWDIFPSYNLAS*TLEPSSSTLVW
Trigger: CCATACCAGTGTGGAAGAACTAGGCTCAAGTGTCAAAGAGGCTAGGTTGTACGAGGGAAAGATGTCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp ATGTTGTTCAACACACAAGCACAGCTGCTTCATCCATaGCAACTGGGACTGGACAGCAGCACTATATGCCTC +
Preference number: 6 (lower is better)
Translates to: MLFNTQAQLLHP*QLGLDSSTICL
Trigger: GAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GACAGACTGGTGCTGCGGTCGCAGGTATATTTTCGTTaGATGGAGTCTTGGAGGTTTCTCAGAAATGACTCC +
Preference number: 6 (lower is better)
Translates to: DRLVLRSQVYFR*MESWRFLRNDS
Trigger: GGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGCGACCGCAGCACCAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GGTCTGGATTGCGTGGCTTTAGCTGAACAATGGTTTTaGATCTCCCAACAAGACTGGCAACGGAACTCTTGG +
Preference number: 6 (lower is better)
Translates to: GLDCVALAEQWF*ISQQDWQRNSW
Trigger: CCAAGAGTTCCGTTGCCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTTTGTTCCGTCTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: AKILQLLMAGVL*FLQSLLFRLLS
Trigger: GCTCAGCAGACGGAACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp ATAAACTGGACCTGCTGCTTCTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGACCAAGAACTCCCATC +
Preference number: 6 (lower is better)
Translates to: INWTCCFWAFNM*GSIDKGPRTPI
Trigger: GATGGGAGTTCTTGGTCCCTTGTCTATTGACCCCAACATGTTGAATGCCCAGAAGCAGCAGGTCCAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CTTGTCAGTGAGCTCAACCCACTTCTGACTGATGCTTaGCAGATCTTTGTGTACTTGGCTGGCAGATGGAGA +
Preference number: 6 (lower is better)
Translates to: LVSELNPLLTDA*QIFVYLAGRWR
Trigger: TCTCCATCTGCCAGCCAAGTACACAAAGATCTGCAAAGCATCAGTCAGAAGTGGGTTGAGCTCACTGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp AGACCGTGCTTTGATGTCCTCCCAGAAGAACACCATTaGATCCAGCTTGTCCTGGATTTCTTTTGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RPCFDVLPEEHH*IQLVLDFFCSQ
Trigger: CTGGCTGCAAAAGAAATCCAGGACAAGCTGGATCAAATGGTGTTCTTCTGGGAGGACATCAAAGCACGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp AAGAAGCCCCGAAACATGTTCAATTTCCCCATAAGTTaGACAGCAGTGTGGCTAGACACAAGGCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: KKPRNMFNFPIS*TAVWLDTRPWA
Trigger: AGCCCAAGGCCTTGTGTCTAGCCACACTGCTGTCAAACTTATGGGGAAATTGAACATGTTTCGGGGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GTCTTGGACATCAGTAGTCTCCTGTCTTGTGGTAATTaGGGCAGCCATGTCTCCTTTGGAAATGTGGGGTAC +
Preference number: 6 (lower is better)
Translates to: VLDISSLLSCGN*GSHVSFGNVGY
Trigger: GTACCCCACATTTCCAAAGGAGACATGGCTGCCCAAATTACCACAAGACAGGAGACTACTGATGTCCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GCCATGAAGGGGCCTTGTTCATCTCCAAGGATCTCTTaGTGCTTTTCCTTAGGTATCTTCCCATCCACCTTC +
Preference number: 6 (lower is better)
Translates to: AMKGPCSSPRIS*CFSLGIFPSTF
Trigger: GAAGGTGGATGGGAAGATACCTAAGGAAAAGCACAAAGAGATCCTTGGAGATGAACAAGGCCCCTTCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp AGAGAAGCCTCCATCCTTTCTGCAAATTCTGGGAAGTaGGGTGGCATGAAGGACTTCCACGATCTCCTGTTA +
Preference number: 6 (lower is better)
Translates to: REASILSANSGK*GGMKDFHDLLL
Trigger: TAACAGGAGATCGTGGAAGTCCTTCATGCCACCCAACTTCCCAGAATTTGCAGAAAGGATGGAGGCTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp CATGTCATGGGTGGCTTCCAAGCTGCTCTTTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTTGGCCAAGGCTTCTTGGATGACTCC +
Preference number: 6 (lower is better)
Translates to: HVMGGFQAALLSSNV*LQFHVVGQGFLDDS
Trigger: GGAGTCATCCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAAGCCACCCATGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CATGAATCGAGTGACCATGTCATGGGTGGCTTCCAAGCTGCTCTTTaGTCTAGCAATGTCTTGCTTCAGTTTCATGTTGTTGGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: HESSDHVMGGFQAAL*SSNVLLQFHVVGQG
Trigger: GCCTTGGCCAACAACATGAAACTGAAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAAGCCACCCATGACATGGTCACTCGATTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp CTCGTTTTGGCCTGTAGCTCCTCAGTTATGGCATCCATGTTCTGGTaGAGCCCAGCCTTCTCATCTCGGATCTCATCTTCATCTATTTCT +
Preference number: 6 (lower is better)
Translates to: LVLACSSSVMASMFW*SPAFSSRISSSSIS
Trigger: AGAAATAGATGAAGATGAGATCCGAGATGAGAAGGCTGGGCTCAACCAGAACATGGATGCCATAACTGAGGAGCTACAGGCCAAAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TGGGAGTCAAAGAAGCCCCGAAACATGTTCAATTTCCCCATAAGTTaGACAGCAGTGTGGCTAGACACAAGGCCTTGGGCTATTGCTTCA +
Preference number: 6 (lower is better)
Translates to: WESKKPRNMFNFPIS*TAVWLDTRPWAIAS
Trigger: TGAAGCAATAGCCCAAGGCCTTGTGTCTAGCCACACTGCTGTCAAACTTATGGGGAAATTGAACATGTTTCGGGGCTTCTTTGACTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CACTCTGCTTCAGAGTCCTCTATGTCAAATCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACGTCCTCAATTTGTGACTGGAGGCTA +
Preference number: 6 (lower is better)
Translates to: HSASESSMSNLRAWI*LRKSRTSSICDWRL
Trigger: TAGCCTCCAGTCACAAATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGACATAGAGGACTCTGAAGCAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCTACCCTTTGTCCAACAGTGTCACTGATCAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTATCCAGTCCTTCTCTGGCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: STLCPTVSLISLYCS*ASDTSLSSPSLALQ
Trigger: TTGGAGAGCCAGAGAAGGACTGGATAAACTTGTGTCTGATGCCAACGAGCAGTACAAACTGATCAGTGACACTGTTGGACAAAGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCAAATTCCTTCAGCATAAACTGCTGCTTCTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGACCAAGAACTCCCATCATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SNSFSINCCFWAFNM*GSIDKGPRTPIISS
Trigger: GGAGCTGATGATGGGAGTTCTTGGTCCCTTGTCTATTGACCCCAACATGTTGAATGCCCAGAAGCAGCAGTTTATGCTGAAGGAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS TCA 72 bp ACAGACTGGTGCTGCGGTCGCAGGTATATTTTCGTTTaGTGGAGTCTTGGAGGTTTCTCAGAAATGACTCCA +
Preference number: 6 (lower is better)
Translates to: TDWCCGRRYIFV*WSLGGFSEMTP
Trigger: TGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAATATACCTGCGACCGCAGCACCAGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CTCTTCAGCACATGGTCTGGATTGCGTGGCTTTAGCTaGACAATGGTTTTTGATCTCCCAACAAGACTGGCA +
Preference number: 6 (lower is better)
Translates to: LFSTWSGLRGFS*TMVFDLPTRLA
Trigger: TGCCAGTCTTGTTGGGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGCTGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TGGTCTGGTTCTCTTCCAGGAACCCTTCAATGTCTTTaGCAGCAGTGGCAAATGAGGTGGAATGACTCTGAA +
Preference number: 6 (lower is better)
Translates to: WSGSLPGTLQCL*QQWQMRWNDSE
Trigger: TTCAGAGTCATTCCACCTCATTTGCCACTGCTGTCAAAGACATTGAAGGGTTCCTGGAAGAGAACCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CTGTCCAGTGTCTCTGGTACCTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAGGTTTGTTTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: LSSVSGTWFTST*PSVAAKVCFSK
Trigger: CTTGGAAAAACAAACCTTAGCTGCCACTGATGGTCATGTAGATGTGAACCAGGTACCAGAGACACTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATGATGTCAATGGAGAAAGCCTTCTGCACCTGCAGCTaGGCAGTAGTCTGGTCTTGTTCTAGACGAATTGGA +
Preference number: 6 (lower is better)
Translates to: MMSMEKAFCTCS*AVVWSCSRRIG
Trigger: TCCAATTCGTCTAGAACAAGACCAGACTACTGCTCAGCTGCAGGTGCAGAAGGCTTTCTCCATTGACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ACTTCAATGACTTTTGGGTCTCCACTTATCGGTCTTTaGGCATCCAGCAGCTCTTCAGTGTGTGTTAGCCAG +
Preference number: 6 (lower is better)
Translates to: TSMTFGSPLIGL*ASSSSSVCVSQ
Trigger: CTGGCTAACACACACTGAAGAGCTGCTGGATGCTCAAAGACCGATAAGTGGAGACCCAAAAGTCATTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATGCCAATGTCACTCTTTTTCCTGTGGCCATGTCTATaGTTCCACCAGTGTTCGCCTGAGCTTCCAAAACCT +
Preference number: 6 (lower is better)
Translates to: MPMSLFFLWPCL*FHQCSPELPKP
Trigger: AGGTTTTGGAAGCTCAGGCGAACACTGGTGGAATCATAGACATGGCCACAGGAAAAAGAGTGACATTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp TCTTATGGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTaGCCTGAACTTCTTGCTGGACTTGCTGAAGATGGC +
Preference number: 6 (lower is better)
Translates to: SYGRCLVVSAES*PELLAGLAEDG
Trigger: GCCATCTTCAGCAAGTCCAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CCTCCAACAACTGATGACTCATTCTCCAACAAAAGGTaGGCAGTCTGGATCTCTGCTTGGAAGCTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: PPTTDDSFSNKR*AVWISAWKLSF
Trigger: AAAGGAGAGCTTCCAAGCAGAGATCCAGACTGCTCACCTTTTGTTGGAGAATGAGTCATCAGTTGTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS TCA 72 bp TTGCAGGACACGAGACCTACATGGGTAGGCTCTGTGTaGATAGGGTCTCCTGACTGTTTTGGTATTGATGAA +
Preference number: 6 (lower is better)
Translates to: LQDTRPTWVGSV*IGSPDCFGIDE
Trigger: TTCATCAATACCAAAACAGTCAGGAGACCCTATTCACACAGAGCCTACCCATGTAGGTCTCGTGTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106220.9
ENSMUST00000147228.8
CDS TCA 72 bp CTGTCCAGTGTCTCTGGTACCTGGTTCACATCTACATaGCCATCAGTGGCAGCTAAGGTTTGTTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: LSSVSGTWFTST*PSVAAKVCFSA
Trigger: TGCTGAAAAACAAACCTTAGCTGCCACTGATGGTCATGTAGATGTGAACCAGGTACCAGAGACACTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS GCA 72 bp TGGGGAAAAGATTTATCTGACATCAAGATCGTATGCTaGCTGATCCAGGGAATGAGTGAGTCCACTCGGCTT +
Preference number: 6 (lower is better)
Translates to: WGKDLSDIKIVC*LIQGMSESTRL
Trigger: AAGCCGAGTGGACTCACTCATTCCCTGGATCAGGCAGCATACGATCTTGATGTCAGATAAATCTTTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
ENSMUST00000238866.2
CDS GCA 72 bp GAGCGCAGAGTTGTGGCACTTGAACCTGATGGAGACTaGTGGAGAAAGACGTTGCATTTCATAGAAATAGCA +
Preference number: 6 (lower is better)
Translates to: ERRVVALEPDGD*WRKTLHFIEIA
Trigger: TGCTATTTCTATGAAATGCAACGTCTTTCTCCAGCAGTCTCCATCAGGTTCAAGTGCCACAACTCTGCGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GTCTCCTCCTTAATAGTCTCAGCAGCTTCAACCTGTTaGTTGATGATGGATGGGTCAATACCAGGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: VSSLIVSAASTC*LMMDGSIPGLS
Trigger: AGAAAGCCCTGGTATTGACCCATCCATCATCAAGCAACAGGTTGAAGCTGCTGAGACTATTAAGGAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CTTTCTGCTACCACTGCGGGATTTCTCCATGAAAGGTaGATGGGTGGGTTCTACACTCTTCCTCTTATATGT +
Preference number: 6 (lower is better)
Translates to: LSATTAGFLHER*MGGFYTLPLIC
Trigger: ACATATAAGAGGAAGAGTGTAGAACCCACCCATGCACCTTTCATGGAGAAATCCCGCAGTGGTAGCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGCCACTTGTCTTGTGACCTCATCTTCAATCTTATCTaGATCAGTTGTTGGCCGATAGGCATCCTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: SHLSCDLIFNLI*ISCWPIGILVG
Trigger: CCCAACAAGGATGCCTATCGGCCAACAACTGATGCAGATAAGATTGAAGATGAGGTCACAAGACAAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TTGTTCTTTGAGGAAAAGCTCCCTTTCAGGGCTCTCTaGAGGAGAGCACTCTATACCTACAACAGACCTTTC +
Preference number: 6 (lower is better)
Translates to: LFFEEKLPFRAL*RRALYTYNRPF
Trigger: GAAAGGTCTGTTGTAGGTATAGAGTGCTCTCCTGCAGAGAGCCCTGAAAGGGAGCTTTTCCTCAAAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CATACTCAGCTGAGGTTCTCTATCACTCATGGTTTCTaGTCCAGCTTTATTGAGTCTCAGTTCTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: HTQLRFSITHGF*SSFIESQFSSQ
Trigger: CTGGCTGGAGAACTGAGACTCAATAAAGCTGGAGCAGAAACCATGAGTGATAGAGAACCTCAGCTGAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp ACATGTCAGGGAGGAGAGGGACTGCCCAATTTTAACTaGCTGGTGCACATCTGTTGCATGGTTTTCTATTTC +
Preference number: 6 (lower is better)
Translates to: TCQGGEGLPNFN*LVHICCMVFYF
Trigger: GAAATAGAAAACCATGCAACAGATGTGCACCAGGCAGTTAAAATTGGGCAGTCCCTCTCCTCCCTGACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000125447.3
ENSMUST00000151346.8
CDS CCA 72 bp TCTTTGACACTTGAGCCTAGTTCTTCCACACTGGTATaGATATGCTGCTGTGTTTCCAACTGCAGCTCCACA +
Preference number: 6 (lower is better)
Translates to: SLTLEPSSSTLV*ICCCVSNCSST
Trigger: TGTGGAGCTGCAGTTGGAAACACAGCAGCATATCCATACCAGTGTGGAAGAACTAGGCTCAAGTGTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TGTCCCACCCAGTTGCAAAGATCCTCCAGCTTCTTATaGCAGGTGTCTTGTTGTTTCTGCAGAGTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: CPTQLQRSSSFL*QVSCCFCRVFC
Trigger: ACAAAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAACTGGGTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000106220.9
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCTCTGGTACCTGGTTCACATCTACATGACCATCAGTaGCAGCTAAGGTTTGTTTTTCCAAGCAAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: SLVPGSHLHDHQ*QLRFVFPSKLQ
Trigger: CTGGAGCTTGCTTGGAAAAACAAACCTTAGCTGCCACTGATGGTCATGTAGATGTGAACCAGGTACCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CCTGATCCCTTTCTAGGTTTTGTTCAACTTCCCTTATaGACTGCAGCAGGCTCTCCATACTTTCCTGAACAC +
Preference number: 6 (lower is better)
Translates to: PDPFLGFVQLPL*TAAGSPYFPEH
Trigger: GTGTTCAGGAAAGTATGGAGAGCCTGCTGCAGTCCATAAGGGAAGTTGAACAAAACCTAGAAAGGGATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp GTTTGTTCTGCTTCAGAAAGCCACTCCAACAGCATATaGACCGTGTCCCGAAACTCTTCTGCCTGTTTTAAG +
Preference number: 6 (lower is better)
Translates to: VCSASESHSNSI*TVSRNSSACFK
Trigger: CTTAAAACAGGCAGAAGAGTTTCGGGACACGGTCCATATGCTGTTGGAGTGGCTTTCTGAAGCAGAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCACAGGGCTTCCTAGGATGCTTAGCACTGGAAATTTaGGAGATGGTCCCAGTATACAGTTCTTGTAATGCC +
Preference number: 6 (lower is better)
Translates to: SQGFLGCLALEI*EMVPVYSSCNA
Trigger: GGCATTACAAGAACTGTATACTGGGACCATCTCCCAAATTTCCAGTGCTAAGCATCCTAGGAAGCCCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp ACAAAGGAGTCGGGTTCATCACCAATTGTAACTTCCTaGTCCAACTCTTCCTCAGAAAGAACTGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: TKESGSSPIVTS*SNSSSERTAAS
Trigger: GGAAGCAGCAGTTCTTTCTGAGGAAGAGTTGGACCAGGAAGTTACAATTGGTGATGAACCCGACTCCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCTTGGACATCAGTAGTCTCCTGTCTTGTGGTAATTTaGGCAGCCATGTCTCCTTTGGAAATGTGGGGTACA +
Preference number: 6 (lower is better)
Translates to: SWTSVVSCLVVI*AAMSPLEMWGT
Trigger: TGTACCCCACATTTCCAAAGGAGACATGGCTGCCCAAATTACCACAAGACAGGAGACTACTGATGTCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCTCTGGTACCTGGTTCACATCTACATGACCATCAGTaGCAGCTAAGGTTTGTTTTTCAGCAAGCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SLVPGSHLHDHQ*QLRFVFQQAPE
Trigger: CTCTGGAGCTTGCTGAAAAACAAACCTTAGCTGCCACTGATGGTCATGTAGATGTGAACCAGGTACCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CCA 72 bp AGCCTCCATCCTTTCTGCAAATTCTGGGAAGTTGGGTaGCATGAAGGACTTCCACGATCTCCTGTTAACATT +
Preference number: 6 (lower is better)
Translates to: SLHPFCKFWEVG*HEGLPRSPVNI
Trigger: AATGTTAACAGGAGATCGTGGAAGTCCTTCATGCCACCCAACTTCCCAGAATTTGCAGAAAGGATGGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 72 bp GGTGGCTTCCAAGCTGCTCTTTTGTCTAGCAATGTCTaGCTTCAGTTTCATGTTGTTGGCCAAGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GGFQAALLSSNV*LQFHVVGQGFL
Trigger: CAAGAAGCCTTGGCCAACAACATGAAACTGAAGCAAGACATTGCTAGACAAAAGAGCAGCTTGGAAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TGTCTCCTCCTTAATAGTCTCAGCAGCTTCAACCTGTaGCTTGATGATGGATGGGTCAATACCAGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: CLLLNSLSSFNL*LDDGWVNTRAF
Trigger: GAAAGCCCTGGTATTGACCCATCCATCATCAAGCAACAGGTTGAAGCTGCTGAGACTATTAAGGAGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TGGGCAATCTTCTCACCCAGATTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCTCGTATAATATCTCTG +
Preference number: 6 (lower is better)
Translates to: WAIFSPRFSQRC*SSVSGSRIISL
Trigger: CAGAGATATTATACGAGAACCACTGACAGAACTCAAGCACCTCTGGGAGAATCTGGGTGAGAAGATTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CAGTGGACAGATCTTTTAATTCCCTGTCAAGTTCCTTaGCCTGACCCAGTAGATCTTGCAGCTCTGCCACAT +
Preference number: 6 (lower is better)
Translates to: QWTDLLIPCQVP*PDPVDLAALPH
Trigger: ATGTGGCAGAGCTGCAAGATCTACTGGGTCAGGCAAAGGAACTTGACAGGGAATTAAAAGATCTGTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTTGTaGTTTCTGCAGAGTCTTGACCTGAACTTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: AKILQLLMAGVL*FLQSLDLNFLL
Trigger: CAGCAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TTCAGCATAAACTGCTGCTTCTGGGCATTCAACATGTaGGGGTCAATAGACAAGGGACCAAGAACTCCCATC +
Preference number: 6 (lower is better)
Translates to: FSINCCFWAFNM*GSIDKGPRTPI
Trigger: GATGGGAGTTCTTGGTCCCTTGTCTATTGACCCCAACATGTTGAATGCCCAGAAGCAGCAGTTTATGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106224.8
CDS CAA 90 bp CTCTTTTACATGTTGTTCAACACACAAGCACAGCTGCTTCATCCATaGCAACTGGGACTGGACAGCAGCACTATATGCCTCTACTGTTTG +
Preference number: 6 (lower is better)
Translates to: LFYMLFNTQAQLLHP*QLGLDSSTICLYCL
Trigger: CAAACAGTAGAGGCATATAGTGCTGCTGTCCAGTCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACATGTAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCTGTCAGTTTACCACACTGCTTATTAAGGGCTTCTAGCTCCCTCTaGAGACCCAGTAAGTCTAACGTCCCCTCTTCCTCCAACATTTTT +
Preference number: 6 (lower is better)
Translates to: SVSLPHCLLRASSSL*RPSKSNVPSSSNIF
Trigger: AAAAATGTTGGAGGAAGAGGGGACGTTAGACTTACTGGGTCTCAAGAGGGAGCTAGAAGCCCTTAATAAGCAGTGTGGTAAACTGACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TGCTGTCTATGGGCAATCTTCTCACCCAGATTCTCCCAGAGGTGCTaGAGTTCTGTCAGTGGTTCTCGTATAATATCTCTGTCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: CCLWAIFSPRFSQRC*SSVSGSRIISLSVS
Trigger: TGAAACTGACAGAGATATTATACGAGAACCACTGACAGAACTCAAGCACCTCTGGGAGAATCTGGGTGAGAAGATTGCCCATAGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GTGTCTACCAAACCAAGATTTGAGGCCAAAGTTACCGAAAGCTTTTaGCCTCGTTTCAGGTCAACAATTCCACCAGTTATCACCTGTCCC +
Preference number: 6 (lower is better)
Translates to: VSTKPRFEAKVTESF*PRFRSTIPPVITCP
Trigger: GGGACAGGTGATAACTGGTGGAATTGTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAACTTTGGCCTCAAATCTTGGTTTGGTAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CCTCCCAAGTGTTACCCGGTATTTATTCTCTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTTGCACTGAGCCACTTGTCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: PPKCYPVFILSNLFH*ESFCTLALSHLSCD
Trigger: GTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGAGAGAATAAATACCGGGTAACACTTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CAA 90 bp ACTTCACTGAGAGAAGCCTCCATCCTTTCTGCAAATTCTGGGAAGTaGGGTGGCATGAAGGACTTCCACGATCTCCTGTTAACATTATCT +
Preference number: 6 (lower is better)
Translates to: TSLREASILSANSGK*GGMKDFHDLLLTLS
Trigger: AGATAATGTTAACAGGAGATCGTGGAAGTCCTTCATGCCACCCAACTTCCCAGAATTTGCAGAAAGGATGGAGGCTTCTCTCAGTGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp TTTTCGTTTGATGGAGTCTTGGAGGTTTCTCAGAAATaGCTCCAGGTCTCGGGCATCACTGAAGAACTGGAA +
Preference number: 6 (lower is better)
Translates to: FSFDGVLEVSQK*LQVSGITEELE
Trigger: TTCCAGTTCTTCAGTGATGCCCGAGACCTGGAGTCATTTCTGAGAAACCTCCAAGACTCCATCAAACGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GGCCTTCTCAATGTCTGCAGATGCACTAGTGTGAGATaGGGTAGTTGTTCCTTGTGTATTTCTTGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: GLLNVCRCTSVR*GSCSLCISCQS
Trigger: ACTCTGGCAAGAAATACACAAGGAACAACTACCTCATCTCACACTAGTGCATCTGCAGACATTGAGAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATGATGGATGGGTCAATACCAGGGCTTTCTAAGTCATaGACAATATCCTGGGTGTCTTTGATGGTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: MMDGSIPGLSKS*TISWVSLMVVR
Trigger: CCTGACCACCATCAAAGACACCCAGGATATTGTTCATGACTTAGAAAGCCCTGGTATTGACCCATCCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp AACTGCTTGACAGGCAACAATTTCAACCCTGACTCTTaGTGGATGATACATCTCTGCATCAGGTCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: NCLTGNNFNPDS*WMIHLCIRSSK
Trigger: CTTGCTGGACCTGATGCAGAGATGTATCATCCATCAAGAGTCAGGGTTGAAATTGTTGCCTGTCAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CCCCTTCAGTATAGAACGGTAAAGCATCTTGATTTGTaGGGGAAGCATCTTTGGATGTCATCTGGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: PLQYRTVKHLDL*GKHLWMSSGKG
Trigger: TCCCTTCCCAGATGACATCCAAAGATGCTTCCCTCACAAATCAAGATGCTTTACCGTTCTATACTGAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp GACAGATCTTTTAATTCCCTGTCAAGTTCCTTTGCCTaGCCCAGTAGATCTTGCAGCTCTGCCACATTAAGC +
Preference number: 6 (lower is better)
Translates to: DRSFNSLSSSFA*PSRSCSSATLS
Trigger: GCTTAATGTGGCAGAGCTGCAAGATCTACTGGGTCAGGCAAAGGAACTTGACAGGGAATTAAAAGATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp AGGAAGGATTTGAAGCTCCAGCTTCTGATACTTCACTaGGAGAAGCCTCCATCCTTTCTGCAAATTCTGGGA +
Preference number: 6 (lower is better)
Translates to: RKDLKLQLLILH*EKPPSFLQILG
Trigger: TCCCAGAATTTGCAGAAAGGATGGAGGCTTCTCTCAGTGAAGTATCAGAAGCTGGAGCTTCAAATCCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp TCTCCAACATGGGTTCAATTTTATCATGAAACTCTGTaGTCTGAGCAGACTGGGACACAGCCTCATCCAGAG +
Preference number: 6 (lower is better)
Translates to: SPTWVQFYHETL*SEQTGTQPHPE
Trigger: CTCTGGATGAGGCTGTGTCCCAGTCTGCTCAGATCACAGAGTTTCATGATAAAATTGAACCCATGTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140596.2
CDS GCA 72 bp TGTTCTTTCTTGGTTGTCAACTCTTCTGCCAGAACCTaGTGCTCCAAAATGGCCTTCTCAATGTCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: CSFLVVNSSART*CSKMAFSMSAD
Trigger: ATCTGCAGACATTGAGAAGGCCATTTTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACCAAGAAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GATTGTTGTAGCCAGTTTTCAAATTCCTTGTGGTCTTaGAGGAACTTCTGCAGTTCATCTCGTAGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: DCCSQFSNSLWS*RNFCSSSRRAC
Trigger: GCAGGCTCTACGAGATGAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTGGCTACAACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp ACCCTTTGTCCAACAGTGTCACTGATCAGTTTGTACTaGTCGTTGGCATCAGACACAAGTTTATCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: TLCPTVSLISLY*SLASDTSLSSP
Trigger: AGGACTGGATAAACTTGTGTCTGATGCCAACGAGCAGTACAAACTGATCAGTGACACTGTTGGACAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp CTATGGGCAATCTTCTCACCCAGATTCTCCCAGAGGTaGTTGAGTTCTGTCAGTGGTTCTCGTATAATATCT +
Preference number: 6 (lower is better)
Translates to: LWAIFSPRFSQR*LSSVSGSRIIS
Trigger: AGATATTATACGAGAACCACTGACAGAACTCAAGCACCTCTGGGAGAATCTGGGTGAGAAGATTGCCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCAATAGACCGCTGCACAACCTTCTCCCACCGAGACTaGACACTAACCAACAAATTCTTGATCAAGACAACA +
Preference number: 6 (lower is better)
Translates to: SIDRCTTFSHRD*TLTNKFLIKTT
Trigger: TGTTGTCTTGATCAAGAATTTGTTGGTTAGTGTGCAGTCTCGGTGGGAGAAGGTTGTGCAGCGGTCTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TGTGAAAGAAATTGGGATTCACAGGGCTTCCTAGGATaGTTAGCACTGGAAATTTGGGAGATGGTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: CERNWDSQGFLG*LALEIWEMVPV
Trigger: TACTGGGACCATCTCCCAAATTTCCAGTGCTAAGCATCCTAGGAAGCCCTGTGAATCCCAATTTCTTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp TCTCTGGGTTTCAAATCACAAGATTCTGAGCAGGGATaGGTCACCGAAACTTGGTATGAAGATTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: SLGFKSQDSEQG*VTETWYEDSPS
Trigger: TGAGGGTGAATCTTCATACCAAGTTTCGGTGACGCATCCCTGCTCAGAATCTTGTGATTTGAAACCCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp ATGAAGGGGCCTTGTTCATCTCCAAGGATCTCTTTGTaGTTTTCCTTAGGTATCTTCCCATCCACCTTCACT +
Preference number: 6 (lower is better)
Translates to: MKGPCSSPRISL*FSLGIFPSTFT
Trigger: AGTGAAGGTGGATGGGAAGATACCTAAGGAAAAGCACAAAGAGATCCTTGGAGATGAACAAGGCCCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp GTCTGGGTGGCACGGGTGCTGACTTCTGCACATCACTaGTTAGCTTTAATGCATCAAATATTATCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: VWVARVLTSAHH*LALMHQILSSH
Trigger: ATGAGAGGATAATATTTGATGCATTAAAGCTAAGCAGTGATGTGCAGAAGTCAGCACCCGTGCCACCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CCA 72 bp AAAGTAGAGGGCGGAACCAATTCAAGTGACGAGAAATaGCCTTTCCGGTATAGATTTGTACACTCTAAGCGC +
Preference number: 6 (lower is better)
Translates to: KVEGGTNSSDEK*PFRYRFVHSKR
Trigger: GCGCTTAGAGTGTACAAATCTATACCGGAAAGGCCATTTCTCGTCACTTGAATTGGTTCCGCCCTCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp ACCCAGATTCTCCCAGAGGTGCTTGAGTTCTGTCAGTaGTTCTCGTATAATATCTCTGTCAGTTTCATCGGT +
Preference number: 6 (lower is better)
Translates to: TQILPEVLEFCQ*FSYNISVSFIG
Trigger: ACCGATGAAACTGACAGAGATATTATACGAGAACCACTGACAGAACTCAAGCACCTCTGGGAGAATCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CTTCTATCTGGGAAAGAACAGTGTTCAAAATCAGGCTaGGAGGAGAGGCGATGTTTAAACTCTGCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: LLSGKEQCSKSG*EERRCLNSALL
Trigger: TAGCAGAGCAGAGTTTAAACATCGCCTCTCCTCCCAGCCTGATTTTGAACACTGTTCTTTCCCAGATAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp ACCTTGCTTTGTTCTGCAGAGTCTGCTAGTTGTATGTaGGGCATCATGTCAGGGATACAAACTGACCTTAAG +
Preference number: 6 (lower is better)
Translates to: TLLCSAESASCM*GIMSGIQTDLK
Trigger: CTTAAGGTCAGTTTGTATCCCTGACATGATGCCCCACATACAACTAGCAGACTCTGCAGAACAAAGCAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp AGCTCAGAGATGTATACCTTGGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGATTTCATCAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: SSEMYTLAKVSS*SSFSSDFIRCW
Trigger: CCAGCACCTGATGAAATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGCCAAGGTATACATCTCTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CTCTGCTTCAGAGTCCTCTATGTCAAATCTGAGGGCTaGGATTTTGTTAAGGAAGAGCCGTACGTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: LCFRVLYVKSEG*DFVKEEPYVLN
Trigger: ATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGACATAGAGGACTCTGAAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TGTCCAACAGTGTCACTGATCAGTTTGTACTGCTCGTaGGCATCAGACACAAGTTTATCCAGTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: CPTVSLISLYCS*ASDTSLSSPSL
Trigger: CAGAGAAGGACTGGATAAACTTGTGTCTGATGCCAACGAGCAGTACAAACTGATCAGTGACACTGTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCCTCCTTAATAGTCTCAGCAGCTTCAACCTGTTGCTaGATGATGGATGGGTCAATACCAGGGCTTTCTAAG +
Preference number: 6 (lower is better)
Translates to: SSLIVSAASTCC*MMDGSIPGLSK
Trigger: CTTAGAAAGCCCTGGTATTGACCCATCCATCATCAAGCAACAGGTTGAAGCTGCTGAGACTATTAAGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CCTTTCAGCCATAGATTGTTTCATATCCTTGTATGGTaGGAGAGTGTGACTCAGGCTGTCAGCGTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: PFSHRLFHILVW*ESVTQAVSVSF
Trigger: GAAACTGACGCTGACAGCCTGAGTCACACTCTCCAACCATACAAGGATATGAAACAATCTATGGCTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GTTGCAAAGATCCTCCAGCTTCTTATGGCAGGTGTCTaGTTGTTTCTGCAGAGTCTTGACCTGAACTTCTTG +
Preference number: 6 (lower is better)
Translates to: VAKILQLLMAGV*LFLQSLDLNFL
Trigger: CAAGAAGTTCAGGTCAAGACTCTGCAGAAACAACAAGACACCTGCCATAAGAAGCTGGAGGATCTTTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp AGGCTGGAATTCATGGGGAGAGCTCTCACTGTGCTGTaGGAATTTGAAGTCCTGGCAGTCTCTCAAATTTTT +
Preference number: 6 (lower is better)
Translates to: RLEFMGRALTVL*EFEVLAVSQIF
Trigger: AAAAATTTGAGAGACTGCCAGGACTTCAAATTCCAACAGCACAGTGAGAGCTCTCCCCATGAATTCCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp GGCATCACTGAAGAACTGGAAGTAAGCTGCATTCTCTTTTACATGTaGTTCAACACACAAGCACAGCTGCTTCATCCATTGCAACTGGGA +
Preference number: 6 (lower is better)
Translates to: GITEELEVSCILFYM*FNTQAQLLHPLQLG
Trigger: TCCCAGTTGCAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTCTTCAGTGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TGGTTGGAGACAAAGTGGCATCCATGGCTTTCAGGACTTCTTCTTTaGATTCTAACCACTGTAATACAGAGCTCGCCTCCTTTTGAACCT +
Preference number: 6 (lower is better)
Translates to: WLETKWHPWLSGLLL*ILTTVIQSSPPFEP
Trigger: AGGTTCAAAAGGAGGCGAGCTCTGTATTACAGTGGTTAGAATCAAAAGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp ATTGCCGAGGAAGAACCGGTATTTATTCTCTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTTGCACTGAGCCACTTGTCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: IAEEEPVFILSNLFH*ESFCTLALSHLSCD
Trigger: GTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGAGAGAATAAATACCGGTTCTTCCTCGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp ATGACCTTCAAACTGCCAACATTTTCAATAATGGCTTCTTGTTCTTaGAGGAAAAGCTCCCTTTCAGGGCTCTCTGCAGGAGAGCACTCT +
Preference number: 6 (lower is better)
Translates to: MTFKLPTFSIMASCS*RKSSLSGLSAGEHS
Trigger: AGAGTGCTCTCCTGCAGAGAGCCCTGAAAGGGAGCTTTTCCTCAAAGAACAAGAAGCCATTATTGAAAATGTTGGCAGTTTGAAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CTGAGATTTCCTTTCAGCCATAGATTGTTTCATATCCTTGTATGGTaGGAGAGTGTGACTCAGGCTGTCAGCGTCAGTTTCAGTGTCACA +
Preference number: 6 (lower is better)
Translates to: LRFPFSHRLFHILVW*ESVTQAVSVSFSVT
Trigger: TGTGACACTGAAACTGACGCTGACAGCCTGAGTCACACTCTCCAACCATACAAGGATATGAAACAATCTATGGCTGAAAGGAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CTGGAGCTCCATTCCCTAAAAGCTTCCCTTGACAACCTGGCTCTTTaGTTTCTCCATCCTTATCACAAACTTTCTCCATGGACAATTCAC +
Preference number: 6 (lower is better)
Translates to: LELHSLKASLDNLAL*FLHPYHKLSPWTIH
Trigger: GTGAATTGTCCATGGAGAAAGTTTGTGATAAGGATGGAGAAACAAAAGAGCCAGGTTGTCAAGGGAAGCTTTTAGGGAATGGAGCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp GGTTTCTCAGAAATGACTCCAGGTCTCGGGCATCACTaGAGAACTGGAAGTAAGCTGCATTCTCTTTTACAT +
Preference number: 6 (lower is better)
Translates to: GFSEMTPGLGHH*RTGSKLHSLLH
Trigger: ATGTAAAAGAGAATGCAGCTTACTTCCAGTTCTTCAGTGATGCCCGAGACCTGGAGTCATTTCTGAGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TATCTAGGTTCTCCTTCTGGTCTTCCATTGCCAAAGTaGGCTCCTGGATCTGCTGGGAAAAATGTGCAATAT +
Preference number: 6 (lower is better)
Translates to: YLGSPSGLPLPK*APGSAGKNVQY
Trigger: ATATTGCACATTTTTCCCAGCAGATCCAGGAGCTCACTTTGGCAATGGAAGACCAGAAGGAGAACCTAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATATTCTTGAAGCTTTCCTGGAACTCCTTGAGCCTCTaGGTCATTTCTTCTAGAGAGCTCGTTTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: IFLKLSWNSLSL*VISSRELVLAC
Trigger: ACAGGCCAAAACGAGCTCTCTAGAAGAAATGACTCAGAGGCTCAAGGAGTTCCAGGAAAGCTTCAAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GAAGATTTCCCCACGGTGACTGAAGAGCTCATCCATTaGATCTTTGTGTCGAATGATGTCAATGGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: EDFPTVTEELIH*IFVSNDVNGES
Trigger: GCTTTCTCCATTGACATCATTCGACACAAAGATTCAATGGATGAGCTCTTCAGTCACCGTGGGGAAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TGTACAACCAGTCAACTAAAGCCTGCAAAGCATCCATaGACTGGCCTGAAAACAGTAAGGCTTCTTCCAACT +
Preference number: 6 (lower is better)
Translates to: CTTSQLKPAKHP*TGLKTVRLLPT
Trigger: AGTTGGAAGAAGCCTTACTGTTTTCAGGCCAGTTCATGGATGCTTTGCAGGCTTTAGTTGACTGGTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CACTCTCTGTTGCTTTTTCCCAGGACCAAATCTCTGTaGGTGTTGGTAGAAAAAGAGCCTCAATTTGCTGTC +
Preference number: 6 (lower is better)
Translates to: HSLLLFPRTKSL*VLVEKEPQFAV
Trigger: GACAGCAAATTGAGGCTCTTTTTCTACCAACACTCACAGAGATTTGGTCCTGGGAAAAAGCAACAGAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CCCTTGACGTTCTCTAGCTTCCTCAGCATCCAGACCTaGGGTAGATTGCTTTACGTGAGAAACCATTTTTAT +
Preference number: 6 (lower is better)
Translates to: PLTFSSFLSIQT*GRLLYVRNHFY
Trigger: ATAAAAATGGTTTCTCACGTAAAGCAATCTACCTCAGGTCTGGATGCTGAGGAAGCTAGAGAACGTCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp ATAGATTGTTTCATATCCTTGTATGGTTGGAGAGTGTaGCTCAGGCTGTCAGCGTCAGTTTCAGTGTCACAG +
Preference number: 6 (lower is better)
Translates to: IDCFISLYGWRV*LRLSASVSVSQ
Trigger: CTGTGACACTGAAACTGACGCTGACAGCCTGAGTCACACTCTCCAACCATACAAGGATATGAAACAATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp CAGGTCTCGGGCATCACTGAAGAACTGGAAGTAAGCTaGATTCTCTTTTACATGTTGTTCAACACACAAGCA +
Preference number: 6 (lower is better)
Translates to: QVSGITEELEVS*ILFYMLFNTQA
Trigger: TGCTTGTGTGTTGAACAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTCTTCAGTGATGCCCGAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp TCACAGATAAAGTGCTCTTCAGCACATGGTCTGGATTaGGTGGCTTTAGCTGAACAATGGTTTTTGATCTCC +
Preference number: 6 (lower is better)
Translates to: SQIKCSSAHGLD*VALAEQWFLIS
Trigger: GGAGATCAAAAACCATTGTTCAGCTAAAGCCACGCAATCCAGACCATGTGCTGAAGAGCACTTTATCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp AGGCTTCTCGGTTTCTCCACAGGCAAAAATCAAATCTaGTCCAAGGATTCTAATGAACTCCAACTCCTCATG +
Preference number: 6 (lower is better)
Translates to: RLLGFSTGKNQI*SKDSNELQLLM
Trigger: CATGAGGAGTTGGAGTTCATTAGAATCCTTGGAGCAGATTTGATTTTTGCCTGTGGAGAAACCGAGAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GCTGCTTCTCTCTCTAGAATACCTCTATCAATGGACTaGAAAACTGTTAACGGTGCTTTACTTTCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: AASLSRIPLSMD*KTVNGALLSGS
Trigger: GGACCCTGAAAGTAAAGCACCGTTAACAGTTTTGCAGTCCATTGATAGAGGTATTCTAGAGAGAGAAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp CGCTGTCCAATGGCCTTCACCTTTTCTGATAAGTCCTaGAGCAGGTCTTGGTATTGGGTACTTTTAACAATA +
Preference number: 6 (lower is better)
Translates to: RCPMAFTFSDKS*SRSWYWVLLTI
Trigger: TATTGTTAAAAGTACCCAATACCAAGACCTGCTCCAGGACTTATCAGAAAAGGTGAAGGCCATTGGACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CATTGTCTAATTGTCCCAAATCAGACCGAATCTCACTaGTCTCCTCTAGCTGTTGCTTTACAGCTTCAGGTT +
Preference number: 6 (lower is better)
Translates to: HCLIVPNQTESH*SPLAVALQLQV
Trigger: AACCTGAAGCTGTAAAGCAACAGCTAGAGGAGACCAGTGAGATTCGGTCTGATTTGGGACAATTAGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCTGCTTCAGAGTCCTCTATGTCAAATCTGAGGGCTTaGATTTTGTTAAGGAAGAGCCGTACGTCCTCAATT +
Preference number: 6 (lower is better)
Translates to: SASESSMSNLRA*ILLRKSRTSSI
Trigger: AATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGACATAGAGGACTCTGAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp ATAAGTTTGACAGCAGTGTGGCTAGACACAAGGCCTTaGGCTATTGCTTCATTTAGTAAGAGTTTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: ISLTAVWLDTRP*AIASFSKSFWP
Trigger: AGGCCAGAAACTCTTACTAAATGAAGCAATAGCCCAAGGCCTTGTGTCTAGCCACACTGCTGTCAAACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCAATGACTTCTTCAGTCGTCAAAGACTCACAGGTCTaGGAGTCAAAGAAGCCCCGAAACATGTTCAATTTC +
Preference number: 6 (lower is better)
Translates to: SMTSSVVKDSQV*ESKKPRNMFNF
Trigger: GAAATTGAACATGTTTCGGGGCTTCTTTGACTCCCAGACCTGTGAGTCTTTGACGACTGAAGAAGTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp GGTACATCTGAAATTTGGGGTTCTTCATCTGATTCCTaGGAGTTCAGTCTTTCTGGTCTTGGGATCTCAGAA +
Preference number: 6 (lower is better)
Translates to: GTSEIWGSSSDS*EFSLSGLGISE
Trigger: TTCTGAGATCCCAAGACCAGAAAGACTGAACTCCCAGGAATCAGATGAAGAACCCCAAATTTCAGATGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp GTGGTAATTTGGGCAGCCATGTCTCCTTTGGAAATGTaGGGTACATCTGAAATTTGGGGTTCTTCATCTGAT +
Preference number: 6 (lower is better)
Translates to: VVIWAAMSPLEM*GTSEIWGSSSD
Trigger: ATCAGATGAAGAACCCCAAATTTCAGATGTACCCCACATTTCCAAAGGAGACATGGCTGCCCAAATTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TGTGAAGTTTTAATGGCCTCAGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCCAGAACCTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CEVLMASETCSF*VVNSSARTCCS
Trigger: GGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATTAAAACTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TTGTTAGATTCTGCTTGGGCTTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCATCCATGGCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: LLDSAWAFTVSV*VGDKVASMAFR
Trigger: CCTGAAAGCCATGGATGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCAGAGTCCTCTATGTCAAATCTGAGGGCTTGGATTTaGTTAAGGAAGAGCCGTACGTCCTCAATTTGTGAC +
Preference number: 6 (lower is better)
Translates to: SESSMSNLRAWI*LRKSRTSSICD
Trigger: GTCACAAATTGAGGACGTACGGCTCTTCCTTAACAAAATCCAAGCCCTCAGATTTGACATAGAGGACTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCATCTACCCTTTGTCCAACAGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCAGACACAAGTTTATCC +
Preference number: 6 (lower is better)
Translates to: SSTLCPTVSLIS*YCSLASDTSLS
Trigger: GGATAAACTTGTGTCTGATGCCAACGAGCAGTACAAACTGATCAGTGACACTGTTGGACAAAGGGTAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CTGAAGCTGCCTTATGAGAATAGCGCAAGCCATATCTaGGTCAATCAAATTATGTCTCACAGCCTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: LKLPYENSASHI*VNQIMSHSLFH
Trigger: GTGGAAGAGGCTGTGAGACATAATTTGATTGACCAAGATATGGCTTGCGCTATTCTCATAAGGCAGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp ATATTCTTTAGCTCAGAGATGTATACCTTGGCCAAAGTCTCTTCTTaGTCCTCATTCTCCAGTGATTTCATCAGGTGCTGGAAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: IFFSSEMYTLAKVSS*SSFSSDFIRCWKWA
Trigger: AGCCCACTTCCAGCACCTGATGAAATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGCCAAGGTATACATCTCTGAGCTAAAGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCCTCCAGGAGTAGTCGGATATTCTTTAGCTCAGAGATGTATACCTaGGCCAAAGTCTCTTCTTTGTCCTCATTCTCCAGTGATTTCATC +
Preference number: 6 (lower is better)
Translates to: SSRSSRIFFSSEMYT*AKVSSLSSFSSDFI
Trigger: GATGAAATCACTGGAGAATGAGGACAAAGAAGAGACTTTGGCCAAGGTATACATCTCTGAGCTAAAGAATATCCGACTACTCCTGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AAGAAGATCTGTGAAGTTTTAATGGCCTCAGAAACTTGTTCTTTCTaGGTTGTCAACTCTTCTGCCAGAACCTGCTGCTCCAAAATGGCC +
Preference number: 6 (lower is better)
Translates to: KKICEVLMASETCSF*VVNSSARTCCSKMA
Trigger: GGCCATTTTGGAGCAGCAGGTTCTGGCAGAAGAGTTGACAACCAAGAAAGAACAAGTTTCTGAGGCCATTAAAACTTCACAGATCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AGAAAAGCCTTGTTAGATTCTGCTTGGGCTTTTACTGTTTCTGTCTaGGTTGGAGACAAAGTGGCATCCATGGCTTTCAGGACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RKALLDSAWAFTVSV*VGDKVASMAFRTSS
Trigger: AGAAGAAGTCCTGAAAGCCATGGATGCCACTTTGTCTCCAACCAAGACAGAAACAGTAAAAGCCCAAGCAGAATCTAACAAGGCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GCATCAATTTCATCTACCCTTTGTCCAACAGTGTCACTGATCAGTTaGTACTGCTCGTTGGCATCAGACACAAGTTTATCCAGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ASISSTLCPTVSLIS*YCSLASDTSLSSPS
Trigger: AGAAGGACTGGATAAACTTGTGTCTGATGCCAACGAGCAGTACAAACTGATCAGTGACACTGTTGGACAAAGGGTAGATGAAATTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TTCATCCAACGCATATACTTTTTCCTCCAGACATCAAAGTCAAAGTaGGCAAATTCTTTCAATTCCGGGCATAGCTCCTCCAGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: FIQRIYFFLQTSKSK*ANSFNSGHSSSSLS
Trigger: GGACAGACTGGAGGAGCTATGCCCGGAATTGAAAGAATTTGCCAACTTTGACTTTGATGTCTGGAGGAAAAAGTATATGCGTTGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp AGGGATTCCAGAATTACAAGAGCAATCTTAGCAGCTACTAGATTATaGGTCACTGCCTCATCAATAGTCATCCTATCCCCTGTGACAGTG +
Preference number: 6 (lower is better)
Translates to: RDSRITRAILAATRL*VTASSIVILSPVTV
Trigger: CACTGTCACAGGGGATAGGATGACTATTGATGAGGCAGTGACCAATAATCTAGTAGCTGCTAAGATTGCTCTTGTAATTCTGGAATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CTGAGAATCTCCAAACCGGTATTTATTCTCTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTTGCACTGAGCCACTTGTCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: LRISKPVFILSNLFH*ESFCTLALSHLSCD
Trigger: GTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGAGAGAATAAATACCGGTTTGGAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
CDS CAA 90 bp TTCATCCAACGCATATACTTTTTCCTCCAGACATCAAAGTCAAAGTaGGCAAATTCTTTCAATTCCGGGCATAGCTGCTCCTCCAGTCTG +
Preference number: 6 (lower is better)
Translates to: FIQRIYFFLQTSKSK*ANSFNSGHSCSSSL
Trigger: CAGACTGGAGGAGCAGCTATGCCCGGAATTGAAAGAATTTGCCAACTTTGACTTTGATGTCTGGAGGAAAAAGTATATGCGTTGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154824.8
CDS TCA 72 bp AACCGCCGGAGAGCATCACTGATATATTTTACATGCTaGGTTGTTAATGTCACCAAAGCTGTGTATCGAGTC +
Preference number: 6 (lower is better)
Translates to: NRRRASLIYFTC*VVNVTKAVYRV
Trigger: GACTCGATACACAGCTTTGGTGACATTAACAACTCAGCATGTAAAATATATCAGTGATGCTCTCCGGCGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CTTTCTCTTCCTCTTCCAACCGCCGGAGAGCATCACTaGTATATTTTACATGCTGAGTTGTTAATGTCACCA +
Preference number: 6 (lower is better)
Translates to: LSLPLPTAGEHH*YILHAELLMSP
Trigger: TGGTGACATTAACAACTCAGCATGTAAAATATATCAGTGATGCTCTCCGGCGGTTGGAAGAGGAAGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp AAAATGGCCTTCTCAATGTCTGCAGATGCACTAGTGTaGGATGAGGTAGTTGTTCCTTGTGTATTTCTTGCC +
Preference number: 6 (lower is better)
Translates to: KMAFSMSADALV*DEVVVPCVFLA
Trigger: GGCAAGAAATACACAAGGAACAACTACCTCATCTCACACTAGTGCATCTGCAGACATTGAGAAGGCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS GCA 72 bp GACATCAAGGAATTTAATTTCTCGCTCTTCAGACCGTaGTTTGATGTCCTCCCAGAAGAACACCATTTGATC +
Preference number: 6 (lower is better)
Translates to: DIKEFNFSLFRP*FDVLPEEHHLI
Trigger: GATCAAATGGTGTTCTTCTGGGAGGACATCAAAGCACGGTCTGAAGAGCGAGAAATTAAATTCCTTGATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000140596.2
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CCAGTTCCATTGTCAACTCAGAGAAGTAGGTTTTCTTaGCTGAGATATTGGGATTACTGTCACTCCAATCAC +
Preference number: 6 (lower is better)
Translates to: PVPLSTQRSRFS*LRYWDYCHSNH
Trigger: GTGATTGGAGTGACAGTAATCCCAATATCTCAGCCAAGAAAACCTACTTCTCTGAGTTGACAATGGAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TGCCCTTGTCAAGCAACTGATTGTAAATCTCTTCCTTaGCTCTCAGCTGGGAATGTAGTTCCATATGTGTAT +
Preference number: 6 (lower is better)
Translates to: CPCQATDCKSLP*LSAGNVVPYVY
Trigger: ATACACATATGGAACTACATTCCCAGCTGAGAGCCAAGGAAGAGATTTACAATCAGTTGCTTGACAAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp CCATCTGCAACACTCTGTCCTTCTTGGCTTTGTTTGTaGCCATCCTTAACCAAAAGTTCTTCCTTTAACTCT +
Preference number: 6 (lower is better)
Translates to: PSATLCPSWLCL*PSLTKSSSFNS
Trigger: AGAGTTAAAGGAAGAACTTTTGGTTAAGGATGGCCACAAACAAAGCCAAGAAGGACAGAGTGTTGCAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TTTTGTCTAGCAATGTCTTGCTTCAGTTTCATGTTGTaGGCCAAGGCTTCTTGGATGACTCCTGATGAGAGT +
Preference number: 6 (lower is better)
Translates to: FCLAMSCFSFML*AKASWMTPDES
Trigger: ACTCTCATCAGGAGTCATCCAAGAAGCCTTGGCCAACAACATGAAACTGAAGCAAGACATTGCTAGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp CCCCTCAGCCACAATCACCTCATAGGAACCACTGTGTaGATTAAGGTTCTTTTGAAACTCTTCATTCTCTTG +
Preference number: 6 (lower is better)
Translates to: PLSHNHLIGTTV*IKVLLKLFILL
Trigger: CAAGAGAATGAAGAGTTTCAAAAGAACCTTAATCAACACAGTGGTTCCTATGAGGTGATTGTGGCTGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GAAGAACCGGTATTTATTCTCTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTTGCACTGAGCCACTTG +
Preference number: 6 (lower is better)
Translates to: EEPVFILSNLFH*ESFCTLALSHL
Trigger: CAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGAGAGAATAAATACCGGTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TTTTCAGCACCTCTGCCTTTAGTAGCCTTTTCCAGATaGATAAGTTCTGTCTGGTCAGCAGTGTCTACCAAA +
Preference number: 6 (lower is better)
Translates to: FSAPLPLVAFSR*ISSVWSAVSTK
Trigger: TTTGGTAGACACTGCTGACCAGACAGAACTTATCAATCTGGAAAAGGCTACTAAAGGCAGAGGTGCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GAAATCCCCCAAGTTCCCACTAAAGTCCTGGATCTCTaGGATTTCTCTTTTCAAGTCTGGAGAAACAAGATC +
Preference number: 6 (lower is better)
Translates to: EIPQVPTKVLDL*DFSFQVWRNKI
Trigger: GATCTTGTTTCTCCAGACTTGAAAAGAGAAATCCAAGAGATCCAGGACTTTAGTGGGAACTTGGGGGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TGTTACCCGGTATTTATTCTCTCCAATCTGTTCCACTaGGAATCTTTTTGCACACTTGCACTGAGCCACTTG +
Preference number: 6 (lower is better)
Translates to: CYPVFILSNLFH*ESFCTLALSHL
Trigger: CAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGATTGGAGAGAATAAATACCGGGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106220.9
CDS CAA 90 bp TGCATCTCTTCTACCCAAGAGAGTAGTTCATATACAAATCGAAGATaGCCTTCGTCTTCAGAGGATGAGATAGATACAAGTTCAGTCCGG +
Preference number: 6 (lower is better)
Translates to: CISSTQESSSYTNRR*PSSSEDEIDTSSVR
Trigger: CCGGACTGAACTTGTATCTATCTCATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATATGAACTACTCTCTTGGGTAGAAGAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TCAGAGATCTGTTCCTTCTCTCCTTCTGAAAGCTTATGGCCATGCTaGGCTAAGAAGATCTGTGAAGTTTTAATGGCCTCAGAAACTTGT +
Preference number: 6 (lower is better)
Translates to: SEICSFSPSESLWPC*AKKICEVLMASETC
Trigger: ACAAGTTTCTGAGGCCATTAAAACTTCACAGATCTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAACAGATCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp TTAACTGCCTTTTCAGCACCTCTGCCTTTAGTAGCCTTTTCCAGATaGATAAGTTCTGTCTGGTCAGCAGTGTCTACCAAACCAAGATTT +
Preference number: 6 (lower is better)
Translates to: LTAFSAPLPLVAFSR*ISSVWSAVSTKPRF
Trigger: AAATCTTGGTTTGGTAGACACTGCTGACCAGACAGAACTTATCAATCTGGAAAAGGCTACTAAAGGCAGAGGTGCTGAAAAGGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp TCAGGTTGTTTGCGTGTCATCTCCTCCATAAATGACTaGTGCTCAGTGATAAGAGCTTTAACTCTGTCTATG +
Preference number: 6 (lower is better)
Translates to: SGCLRVISSIND*CSVIRALTLSM
Trigger: CATAGACAGAGTTAAAGCTCTTATCACTGAGCATCAGTCATTTATGGAGGAGATGACACGCAAACAACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ATCTGTTCCACTTGGAATCTTTTTGCACACTTGCACTaGGCCACTTGTCTTGTGACCTCATCTTCAATCTTA +
Preference number: 6 (lower is better)
Translates to: ICSTWNLFAHLH*ATCLVTSSSIL
Trigger: TAAGATTGAAGATGAGGTCACAAGACAAGTGGCTCAGTGCAAGTGTGCAAAAAGATTCCAAGTGGAACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000123765.8
ENSMUST00000134458.8
ENSMUST00000149022.8
ENSMUST00000151346.8
ENSMUST00000154824.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CTTTTATTCCAAATGCTGAAGAATCAAGGCATTCCTTaGTCCCCATTCCAGGAGAGGAAGCATTCTCAAGAA +
Preference number: 6 (lower is better)
Translates to: LLFQMLKNQGIP*SPFQERKHSQE
Trigger: TTCTTGAGAATGCTTCCTCTCCTGGAATGGGGATCAAGGAATGCCTTGATTCTTCAGCATTTGGAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS GCA 72 bp AGAGCACTCTATACCTACAACAGACCTTTCACCTTTTaGTTCAGTACAGTTTTCCTGACTGGGATAGTCTTT +
Preference number: 6 (lower is better)
Translates to: RALYTYNRPFTF*FSTVFLTGIVF
Trigger: AAAGACTATCCCAGTCAGGAAAACTGTACTGAAGCAAAAGGTGAAAGGTCTGTTGTAGGTATAGAGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp AGTGTGCTTAAGGTAGCATCTTCAAAAGGAGAACTATaGAACAAGGCAGGCTCATCAGCATTATCTTCAGTA +
Preference number: 6 (lower is better)
Translates to: SVLKVASSKGEL*NKAGSSALSSV
Trigger: TACTGAAGATAATGCTGATGAGCCTGCCTTGTTGCATAGTTCTCCTTTTGAAGATGCTACCTTAAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS GCA 72 bp AACCAAGATTTGAGGCCAAAGTTACCGAAAGCTTTTTaGCTCGTTTCAGGTCAACAATTCCACCAGTTATCA +
Preference number: 6 (lower is better)
Translates to: NQDLRPKLPKAF*LVSGQQFHQLS
Trigger: TGATAACTGGTGGAATTGTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAACTTTGGCCTCAAATCTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCAACTCAGAGAAGTAGGTTTTCTTGGCTGAGATATTaGGATTACTGTCACTCCAATCACATGCTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: STQRSRFSWLRY*DYCHSNHMLVP
Trigger: AGGAACTAGCATGTGATTGGAGTGACAGTAATCCCAATATCTCAGCCAAGAAAACCTACTTCTCTGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TCAGAGATCTGTTCCTTCTCTCCTTCTGAAAGCTTATaGCCATGCTTGGCTAAGAAGATCTGTGAAGTTTTA +
Preference number: 6 (lower is better)
Translates to: SEICSFSPSESL*PCLAKKICEVL
Trigger: TAAAACTTCACAGATCTTCTTAGCCAAGCATGGCCATAAGCTTTCAGAAGGAGAGAAGGAACAGATCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp TTCTCAGATTGTTGTAGCCAGTTTTCAAATTCCTTGTaGTCTTGCAGGAACTTCTGCAGTTCATCTCGTAGA +
Preference number: 6 (lower is better)
Translates to: FSDCCSQFSNSL*SCRNFCSSSRR
Trigger: TCTACGAGATGAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTGGCTACAACAATCTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp ACAGATAAGAAGTCAGAAATAGGCTCAGCTGTCTCATaGAATTGTTTAGCCAGAACCAAGATATCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: TDKKSEIGSAVS*NCLARTKISSS
Trigger: GCTGGAAGATATCTTGGTTCTGGCTAAACAATTCCATGAGACAGCTGAGCCTATTTCTGACTTCTTATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000125447.3
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CCA 72 bp AGGCCTTGGGCTATTGCTTCATTTAGTAAGAGTTTCTaGCCTGTTTCTTCATTAAAGATACCACCATCCTGT +
Preference number: 6 (lower is better)
Translates to: RPWAIASFSKSF*PVSSLKIPPSC
Trigger: ACAGGATGGTGGTATCTTTAATGAAGAAACAGGCCAGAAACTCTTACTAAATGAAGCAATAGCCCAAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GAAGAACTGGAAGTAAGCTGCATTCTCTTTTACATGTaGTTCAACACACAAGCACAGCTGCTTCATCCATTG +
Preference number: 6 (lower is better)
Translates to: EELEVSCILFYM*FNTQAQLLHPL
Trigger: CAATGGATGAAGCAGCTGTGCTTGTGTGTTGAACAACATGTAAAAGAGAATGCAGCTTACTTCCAGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp TCATTCTCAGATTGTTGTAGCCAGTTTTCAAATTCCTaGTGGTCTTGCAGGAACTTCTGCAGTTCATCTCGT +
Preference number: 6 (lower is better)
Translates to: SFSDCCSQFSNS*WSCRNFCSSSR
Trigger: ACGAGATGAACTGCAGAAGTTCCTGCAAGACCACAAGGAATTTGAAAACTGGCTACAACAATCTGAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp AAACCAAGATTTGAGGCCAAAGTTACCGAAAGCTTTTaGCCTCGTTTCAGGTCAACAATTCCACCAGTTATC +
Preference number: 6 (lower is better)
Translates to: KPRFEAKVTESF*PRFRSTIPPVI
Trigger: GATAACTGGTGGAATTGTTGACCTGAAACGAGGCAAAAAGCTTTCGGTAACTTTGGCCTCAAATCTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TCTTTTATTCCAAATGCTGAAGAATCAAGGCATTCCTaGATCCCCATTCCAGGAGAGGAAGCATTCTCAAGA +
Preference number: 6 (lower is better)
Translates to: SFIPNAEESRHS*IPIPGEEAFSR
Trigger: TCTTGAGAATGCTTCCTCTCCTGGAATGGGGATCAAGGAATGCCTTGATTCTTCAGCATTTGGAATAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp AGTCCTCCTGTAGGTTTAGATGCAGAAAGTTGGTTCTCCATTCTATaGAGTTCTAAGAGGAAATCTTCAATTTCACTGTGGAAACCCTGG +
Preference number: 6 (lower is better)
Translates to: SPPVGLDAESWFSIL*SSKRKSSISLWKPW
Trigger: CCAGGGTTTCCACAGTGAAATTGAAGATTTCCTCTTAGAACTCAATAGAATGGAGAACCAACTTTCTGCATCTAAACCTACAGGAGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 90 bp GGTCCTCTAGCTTCAAAAACATTAGATGATGCTCCTAATGTACCATaGCTGGATATGGTACTTCCTTCCATCTTCTCCATGGTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: GPLASKTLDDAPNVP*LDMVLPSIFSMVLF
Trigger: AAAAAGCACCATGGAGAAGATGGAAGGAAGTACCATATCCAGCAATGGTACATTAGGAGCATCATCTAATGTTTTTGAAGCTAGAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS CAA 90 bp TGTATGTGGGGCATCATGTCAGGGATACAAACTGACCTTAAGTTATaGACAAGATCTTTATCTAGGATACCACTCTCTGTTGCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: CMWGIMSGIQTDLKL*TRSLSRIPLSVAFS
Trigger: GGAAAAAGCAACAGAGAGTGGTATCCTAGATAAAGATCTTGTCAATAACTTAAGGTCAGTTTGTATCCCTGACATGATGCCCCACATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp CTGCTTAGCTTTAATGCATCAAATATTATCCTCTCATCCAGCTTCTaGCCTTCTGGTCCTCTAGCTTCAAAAACATTAGATGATGCTCCT +
Preference number: 6 (lower is better)
Translates to: LLSFNASNIILSSSF*PSGPLASKTLDDAP
Trigger: AGGAGCATCATCTAATGTTTTTGAAGCTAGAGGACCAGAAGGCAAGAAGCTGGATGAGAGGATAATATTTGATGCATTAAAGCTAAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp TTGTCTCTGACTTCTCCTAGCAAGTTGTCAAGTTTCTaGGTATCACCAGCAAGCAAAGTCTTTTCTTTCAGT +
Preference number: 6 (lower is better)
Translates to: LSLTSPSKLSSF*VSPASKVFSFS
Trigger: ACTGAAAGAAAAGACTTTGCTTGCTGGTGATACTCAGAAACTTGACAACTTGCTAGGAGAAGTCAGAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp TCCTCAGCATCCAGACCTGAGGTAGATTGCTTTACGTaGGAAACCATTTTTATTTGTGTTACTACTTTGTCC +
Preference number: 6 (lower is better)
Translates to: SSASRPEVDCFT*ETIFICVTTLS
Trigger: GGACAAAGTAGTAACACAAATAAAAATGGTTTCTCACGTAAAGCAATCTACCTCAGGTCTGGATGCTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TCAGGAAGTCCTCCTGTAGGTTTAGATGCAGAAAGTTaGTTCTCCATTCTATTGAGTTCTAAGAGGAAATCT +
Preference number: 6 (lower is better)
Translates to: SGSPPVGLDAES*FSILLSSKRKS
Trigger: AGATTTCCTCTTAGAACTCAATAGAATGGAGAACCAACTTTCTGCATCTAAACCTACAGGAGGACTTCCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp AGAATTACAAGAGCAATCTTAGCAGCTACTAGATTATaGGTCACTGCCTCATCAATAGTCATCCTATCCCCT +
Preference number: 6 (lower is better)
Translates to: RITRAILAATRL*VTASSIVILSP
Trigger: AGGGGATAGGATGACTATTGATGAGGCAGTGACCAATAATCTAGTAGCTGCTAAGATTGCTCTTGTAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp GCCAGATATATGATGAATGATACCACCATCAAGTACTaGCTTAGTCAACAGATAAACAGCTGCTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: ARYMMNDTTIKY*LSQQINSCFSL
Trigger: GAGAGAGAAGCAGCTGTTTATCTGTTGACTAAGCAAGTACTTGATGGTGGTATCATTCATCATATATCTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp TTCTCATACTTCGAATTTACATCAAACATGTCACACTaGATCTCTGTAAGATCTTTGCAGGTGTGGTATCCG +
Preference number: 6 (lower is better)
Translates to: FSYFEFTSNMSH*ISVRSLQVWYP
Trigger: CGGATACCACACCTGCAAAGATCTTACAGAGATTCAGTGTGACATGTTTGATGTAAATTCGAAGTATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp GCATCATGTCAGGGATACAAACTGACCTTAAGTTATTaGCAAGATCTTTATCTAGGATACCACTCTCTGTTG +
Preference number: 6 (lower is better)
Translates to: ASCQGYKLTLSY*QDLYLGYHSLL
Trigger: CAACAGAGAGTGGTATCCTAGATAAAGATCTTGTCAATAACTTAAGGTCAGTTTGTATCCCTGACATGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp ACATGTAAACGAACACTTTGTGGGAGTTTGGCATTTTaGCTTCTCAGTAGAAAGGTCTTTACCTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: TCKRTLCGSLAF*LLSRKVFTFRF
Trigger: GAATCTGAAGGTAAAGACCTTTCTACTGAGAAGTCAAAATGCCAAACTCCCACAAAGTGTTCGTTTACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 72 bp TCTACCCAAGAGAGTAGTTCATATACAAATCGAAGATaGCCTTCGTCTTCAGAGGATGAGATAGATACAAGT +
Preference number: 6 (lower is better)
Translates to: STQESSSYTNRR*PSSSEDEIDTS
Trigger: ACTTGTATCTATCTCATCCTCTGAAGACGAAGGCAATCTTCGATTTGTATATGAACTACTCTCTTGGGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS CAA 72 bp GGCATCATGTCAGGGATACAAACTGACCTTAAGTTATaGACAAGATCTTTATCTAGGATACCACTCTCTGTT +
Preference number: 6 (lower is better)
Translates to: GIMSGIQTDLKL*TRSLSRIPLSV
Trigger: AACAGAGAGTGGTATCCTAGATAAAGATCTTGTCAATAACTTAAGGTCAGTTTGTATCCCTGACATGATGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CAA 90 bp ATAGTCCTTCACAATAGTGGAGTACTGCTGGGAAAATTTTTGACATaGGTCCAACTTTGTCTGATTTCTCTCAATTTCAGCAAAGAGTTC +
Preference number: 6 (lower is better)
Translates to: IVLHNSGVLLGKFLT*VQLCLISLNFSKEF
Trigger: GAACTCTTTGCTGAAATTGAGAGAAATCAGACAAAGTTGGACCAATGTCAAAAATTTTCCCAGCAGTACTCCACTATTGTGAAGGACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000147030.2
ENSMUST00000147228.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp CATCTCGGATCTCATCTTCATCTATTTCTGAAGAATTaGTCAGAATGTCAGCAGCACTATTCAGTATTTCCA +
Preference number: 6 (lower is better)
Translates to: HLGSHLHLFLKN*SECQQHYSVFP
Trigger: TGGAAATACTGAATAGTGCTGCTGACATTCTGATCAATTCTTCAGAAATAGATGAAGATGAGATCCGAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000082108.12
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106220.9
ENSMUST00000106224.8
ENSMUST00000134458.8
ENSMUST00000151346.8
ENSMUST00000238555.2
ENSMUST00000238731.2
CDS TCA 72 bp ACTAAAGACAGAGAATCCCTTAGTCCCAAGAGCTGTTaGTATATTGGAAGGTTAATGAAATTTCTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: TKDRESLSPKSC*YIGRLMKFLVR
Trigger: TCTCACCAGAAATTTCATTAACCTTCCAATATATCAACAGCTCTTGGGACTAAGGGATTCTCTGTCTTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp TATATAATAATTTCTCATCCATTAGACCTTCATCAATaGCTTCTTCAGTCGTCAAAGACTCACAGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: YIIISHPLDLHQ*LLQSSKTHRSG
Trigger: CCCAGACCTGTGAGTCTTTGACGACTGAAGAAGTCATTGATGAAGGTCTAATGGATGAGAAATTATTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS CCA 72 bp TTCATTTATCCTCATTGTATCGTATATAGACCGCTGTaGAACATAGCAATCTTCTATATAGCCATCCTCATC +
Preference number: 6 (lower is better)
Translates to: FIYPHCIVYRPL*NIAIFYIAILI
Trigger: GATGAGGATGGCTATATAGAAGATTGCTATGTTCCACAGCGGTCTATATACGATACAATGAGGATAAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125447.3
CDS TCA 72 bp AGATTCAGTGTCAATCCTACATTTCTTTACCAATTCTaGGTAAGGAATAATCGTGCAGTTCTCAGGATCTAT +
Preference number: 6 (lower is better)
Translates to: RFSVNPTFLYQF*VRNNRAVLRIY
Trigger: ATAGATCCTGAGAACTGCACGATTATTCCTTACTCAGAATTGGTAAAGAAATGTAGGATTGACACTGAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp CTGTATATATCAATAATTCCTCCACTTAACATCTGGTaGGATGCAATAATCCTGGCCATGTTTTCATCTAAC +
Preference number: 6 (lower is better)
Translates to: LYISIIPPLNIW*DAIILAMFSSN
Trigger: GTTAGATGAAAACATGGCCAGGATTATTGCATCTCACCAGATGTTAAGTGGAGGAATTATTGATATATACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8
CDS TCA 72 bp AGTCTTTTCTCGACAGCATCGTTTAAAGTCACTCTTTaGTCACTGTATATATCAATAATTCCTCCACTTAAC +
Preference number: 6 (lower is better)
Translates to: SLFSTASFKVTL*SLYISIIPPLN
Trigger: GTTAAGTGGAGGAATTATTGATATATACAGTGATCAAAGAGTGACTTTAAACGATGCTGTCGAGAAAAGACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084301.12
ENSMUST00000097897.11
ENSMUST00000106224.8