RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MACC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041886

Ensembl transcript IDs: ENSMUST00000048880.7, ENSMUST00000221866.2, ENSMUST00000221917.2, ENSMUST00000222058.2, ENSMUST00000222784.2

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTaGAGGATCCAATTATTTCTAGCTCCCATCCCTCCTACCCTGCCA +
Preference number: 1 (lower is better)
Translates to: PVPLFPSTLRCLSTI*RIQLFLAPIPPTLP
Trigger: TGGCAGGGTAGGAGGGATGGGAGCTAGAAATAATTGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR CCA 90 bp CATGGAAGAAGGAGATACTGGCAGTGTACTTTTGAAGGTTATACCTaGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: HGRRRYWQCTFEGYT*PLASASPLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACACTGCCAGTATCTCCTTCTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR TCA 90 bp CATCAATACGTAAGCCTCTACAGGCTTTGCTTCTCAGAATTCTGTTaGATCCACTCTCTTCCCCATTCATATGATATCCTCTACTCCAGC +
Preference number: 1 (lower is better)
Translates to: HQYVSLYRLCFSEFC*IHSLPHSYDILYSS
Trigger: GCTGGAGTAGAGGATATCATATGAATGGGGAAGAGAGTGGATTCAACAGAATTCTGAGAAGCAAAGCCTGTAGAGGCTTACGTATTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR GCA 90 bp TATCATTTACTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTaGCTCAACACAGGCATAATAACACAAAGCCATGGAATGGTGAAC +
Preference number: 1 (lower is better)
Translates to: YHLLKGFPHSFTIML*LNTGIITQSHGMVN
Trigger: GTTCACCATTCCATGGCTTTGTGTTATTATGCCTGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAGTAAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR GCA 90 bp ACAAGTTCACAACTTATGCAGTGTTATCTGTATGACATAAAAGTGTaGTGTGCCTGTGATTGGTATAAACAGTTAGGGGTACACTTGAAG +
Preference number: 1 (lower is better)
Translates to: TSSQLMQCYLYDIKV*CACDWYKQLGVHLK
Trigger: CTTCAAGTGTACCCCTAACTGTTTATACCAATCACAGGCACAGCACACTTTTATGTCATACAGATAACACTGCATAAGTTGTGAACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR TCA 90 bp CTTATTAATTCCATTGACTTCCTGCCAAATAGGAAAGTCAGCTTGTaGTTACTGAATCAATCTATTCTGATTAAGAAAATGCACCACAGC +
Preference number: 1 (lower is better)
Translates to: LINSIDFLPNRKVSL*LLNQSILIKKMHHS
Trigger: GCTGTGGTGCATTTTCTTAATCAGAATAGATTGATTCAGTAATCACAAGCTGACTTTCCTATTTGGCAGGAAGTCAATGGAATTAATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR GCA 90 bp TTAATGGTTTTTGATGCTTTAATGATGTCAAAGAGAGACTGTAAGTaGCTTATTAATTCCATTGACTTCCTGCCAAATAGGAAAGTCAGC +
Preference number: 1 (lower is better)
Translates to: LMVFDALMMSKRDCK*LINSIDFLPNRKVS
Trigger: GCTGACTTTCCTATTTGGCAGGAAGTCAATGGAATTAATAAGGCACTTACAGTCTCTCTTTGACATCATTAAAGCATCAAAAACCATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR GCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCTATTTCAAGTCACTGTaGCCTAGGCTAACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: FEGYTWPLASASPLSLSLYFKSL*PRLTSW
Trigger: CCAACTTGTTAGCCTAGGGCACAGTGACTTGAAATA...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR GCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCCCAGTTAAGTATGCATaGAAGAAACCACACTTAGGT +
Preference number: 2 (lower is better)
Translates to: FEGYTWPLASASPLSLSLPVKYA*KKPHLG
Trigger: ACCTAAGTGTGGTTTCTTGCATGCATACTTAACTGG...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR CAA 90 bp ATCCCTCCTACCCTGCCAACATCAATACGTAAGCCTCTACAGGCTTaGCTTCTCAGAATTCTGTTGAATCCACTCTCTTCCCCATTCATA +
Preference number: 2 (lower is better)
Translates to: IPPTLPTSIRKPLQA*LLRILLNPLSSPFI
Trigger: TATGAATGGGGAAGAGAGTGGATTCAACAGAATTCTGAGAAGCAAAGCCTGTAGAGGCTTACGTATTGATGTTGGCAGGGTAGGAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR TCA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCGTTGGTTGGTTTGTTTaGTCTTACTACACTGATCAG +
Preference number: 2 (lower is better)
Translates to: CTFEGYTWPLASASPLSLVGWFV*SYYTDQ
Trigger: CTGATCAGTGTAGTAAGATCAAACAAACCAACCAAC...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR GCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCCAGATGCTAAATCCTTaGTATCCCTTCCTAAAATTC +
Preference number: 2 (lower is better)
Translates to: FEGYTWPLASASPLSLSLQMLNP*YPFLKF
Trigger: GAATTTTAGGAAGGGATAGCAAGGATTTAGCATCTG...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR TCA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTTTAAGGCATTAAACTaGCTTTACACTAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: CTFEGYTWPLASASPLSLFKALN*LYTSLM
Trigger: CATGAGGCTAGTGTAAAGTCAGTTTAATGCCTTAAA...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAGATTATTTTGCATTCTaGTCATGGGAGAAAACTTCC +
Preference number: 2 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPDYFAF*SWEKTS
Trigger: GGAAGTTTTCTCCCATGATCAGAATGCAAAATAATC...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR GCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCAAGATGCTAAATCTGTaGAAACTCAAGGTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: FEGYTWPLASASPLSLSLKMLNL*KLKVLC
Trigger: ACACAAAACCTTGAGTTTGCACAGATTTAGCATCTT...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR GCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGGCTAAAGGATTATTTTaGATTCTGATCATGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLAKGLF*ILIMGE
Trigger: TTCTCCCATGATCAGAATGCAAAATAATCCTTTAGC...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTTTAAGGCATTAAACTaGCTTTACACTAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTFKALN*LYTSLM
Trigger: CATGAGGCTAGTGTAAAGTCAGTTTAATGCCTTAAA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCGAGCATGTCTTCATGTaGGCATATACACAAATATGT +
Preference number: 2 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTEHVFM*AYTQIC
Trigger: ACATATTTGTGTATATGCTCACATGAAGACATGCTC...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTGAGCATGTCTTCATGTaGGCATATACACAAATATGT +
Preference number: 2 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIEHVFM*AYTQIC
Trigger: ACATATTTGTGTATATGCTCACATGAAGACATGCTC...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR GCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCGCTAAAGGATTATTTTaGATTCTGATCATGGGAGAA +
Preference number: 2 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTAKGLF*ILIMGE
Trigger: TTCTCCCATGATCAGAATGCAAAATAATCCTTTAGC...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR GCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAGCTAAAGGATTATTTTaGATTCTGATCATGGGAGAA +
Preference number: 2 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIAKGLF*ILIMGE
Trigger: TTCTCCCATGATCAGAATGCAAAATAATCCTTTAGC...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR TCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATTTAAGGCATTAAACTaGCTTTACACTAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: CILIMGENFQLDIVSRCRFKALN*LYTSLM
Trigger: CATGAGGCTAGTGTAAAGTCAGTTTAATGCCTTAAA...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATTTAAGGCATTAAACTaGCTTTACACTAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGFKALN*LYTSLM
Trigger: CATGAGGCTAGTGTAAAGTCAGTTTAATGCCTTAAA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR CCA 72 bp AGGAGATACTGGCAGTGTACTTTTGAAGGTTATACCTaGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: RRYWQCTFEGYT*PLASASPLSLS
Trigger: AGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACACTGCCAGTATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAAAGCCTCTACAGGCTTaGCTTCTCAGAATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPKPLQA*LLRILL
Trigger: CAACAGAATTCTGAGAAGCAAAGCCTGTAGAGGCTT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR TCA 72 bp CTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTaGAGGATCCAATTATTTCTAGCTCCCATCCCTCCT +
Preference number: 3 (lower is better)
Translates to: LFPSTLRCLSTI*RIQLFLAPIPP
Trigger: AGGAGGGATGGGAGCTAGAAATAATTGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR CCA 72 bp AATACCAGGAATGTGGCGCATGGAAGAAGGAGATACTaGCAGTGTACTTTTGAAGGTTATACCTGGCCCCTA +
Preference number: 3 (lower is better)
Translates to: NTRNVAHGRRRY*QCTFEGYTWPL
Trigger: TAGGGGCCAGGTATAACCTTCAAAAGTACACTGCCAGTATCTCCTTCTTCCATGCGCCACATTCCTGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCTTGAACTATAAGCCTTaGGTCAGACTCTATCATCAT +
Preference number: 3 (lower is better)
Translates to: FEGYTWPLASASPLSLSLLNYKP*VRLYHH
Trigger: ATGATGATAGAGTCTGACCAAAGGCTTATAGTTCAA...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCCCAGATGCTAAATCCTaGCTATCCCTTCCTAAAATT +
Preference number: 3 (lower is better)
Translates to: CTFEGYTWPLASASPLSLPDAKS*LSLPKI
Trigger: AATTTTAGGAAGGGATAGCAAGGATTTAGCATCTGG...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR TCA 72 bp TTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTaGGGTGTCTGTCCACTATCTGAAGGATCCAATTAT +
Preference number: 3 (lower is better)
Translates to: FVLPLSLYSLQP*GVCPLSEGSNY
Trigger: ATAATTGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR TCA 72 bp GGGGTACACTTGAAGGAATTCTCTGATGGGCTCATGTaGAGCCCCCTGAATAAAGAAGCCAAGAATTTGAGA +
Preference number: 3 (lower is better)
Translates to: GVHLKEFSDGLM*SPLNKEAKNLR
Trigger: TCTCAAATTCTTGGCTTCTTTATTCAGGGGGCTTCACATGAGCCCATCAGAGAATTCCTTCAAGTGTACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCACCCTTACCATTCTCTTaGTTCCCTAAATTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPPLPFS*FPKFVS
Trigger: TGAAACAAATTTAGGGAACAAAGAGAATGGTAAGGG...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR CAA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCCCCTTACCATTCTCTTaGTTCCCTAAATTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: CTFEGYTWPLASASPLSLPLPFS*FPKFVS
Trigger: TGAAACAAATTTAGGGAACAAAGAGAATGGTAAGGG...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCAAGCCTCTACAGGCTTaGCTTCTCAGAATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTKPLQA*LLRILL
Trigger: CAACAGAATTCTGAGAAGCAAAGCCTGTAGAGGCTT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR GCA 72 bp CTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTaGCTCAACACAGGCATAATAACACAAAGCCATGGA +
Preference number: 3 (lower is better)
Translates to: LKGFPHSFTIML*LNTGIITQSHG
Trigger: TCCATGGCTTTGTGTTATTATGCCTGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR CCA 72 bp AGTAGGCAAAGATTAGAAGCCACAACACTCTACTTCTaGACTGTCAACTTGAAGAGGAAGCTTTCCATGCCA +
Preference number: 3 (lower is better)
Translates to: SRQRLEATTLYF*TVNLKRKLSMP
Trigger: TGGCATGGAAAGCTTCCTCTTCAAGTTGACAGTCCAGAAGTAGAGTGTTGTGGCTTCTAATCTTTGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGCCCTTACCATTCTCTTaGTTCCCTAAATTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLPLPFS*FPKFVS
Trigger: TGAAACAAATTTAGGGAACAAAGAGAATGGTAAGGG...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCTTCTCAGAATTCTGTaGAATCCACTCTCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILLRIL*NPLSSP
Trigger: TGGGGAAGAGAGTGGATTCAACAGAATTCTGAGAAG...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTAAGCCTCTACAGGCTTaGCTTCTCAGAATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIKPLQA*LLRILL
Trigger: CAACAGAATTCTGAGAAGCAAAGCCTGTAGAGGCTT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR GCA 72 bp ACTACTGAGAAACTGAATTCCGGAAGGCTGAGTGACTaGTCTAAAGGCTTGTTTAGATTAGTAGGCAAAGAT +
Preference number: 3 (lower is better)
Translates to: TTEKLNSGRLSD*SKGLFRLVGKD
Trigger: ATCTTTGCCTACTAATCTAAACAAGCCTTTAGAGCAGTCACTCAGCCTTCCGGAATTCAGTTTCTCAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
3UTR-3UTR CAA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGACCCTTACCATTCTCTTaGTTCCCTAAATTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: CILIMGENFQLDIVSRCRPLPFS*FPKFVS
Trigger: TGAAACAAATTTAGGGAACAAAGAGAATGGTAAGGG...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAGCATCTGGCCAGTTGTaGGGCAAGCCTAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPASGQL*GKPSPC
Trigger: GCAAGGGCTAGGCTTGCCTCACAACTGGCCAGATGC...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGGCATCTGGCCAGTTGTaGGGCAAGCCTAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLASGQL*GKPSPC
Trigger: GCAAGGGCTAGGCTTGCCTCACAACTGGCCAGATGC...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCGCATCTGGCCAGTTGTaGGGCAAGCCTAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTASGQL*GKPSPC
Trigger: GCAAGGGCTAGGCTTGCCTCACAACTGGCCAGATGC...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATGCTTCCCCCAGAGGTaGAATACGACTGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPCFPQR*NTTGDV
Trigger: CACATCTCCAGTCGTATTTCACCTCTGGGGGAAGCA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATTCCTGTGCCAGATGTaGGTAACCCAGGACATTAGC +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPFLCQM*VTQDIS
Trigger: GCTAATGTCCTGGGTTACTCACATCTGGCACAGGAA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCCCAGATTTTCCTCGGTaGGGAATTTCATATGCCTGC +
Preference number: 4 (lower is better)
Translates to: FEGYTWPLASASPLSLSLPDFPR*GISYAC
Trigger: GCAGGCATATGAAATTCCTCACCGAGGAAAATCTGG...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTGTTTCTTAGCTGCGTaGTGTCCTCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: CTFEGYTWPLASASPLSLCFLAA*CPPEMG
Trigger: ACCCATTTCTGGAGGACATCACGCAGCTAAGAAACA...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATGTTTCTTAGCTGCGTaGTGTCCTCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPCFLAA*CPPEMG
Trigger: ACCCATTTCTGGAGGACATCACGCAGCTAAGAAACA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTGGGGATGGATCAGGTaGAGTGACAAAGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: CTFEGYTWPLASASPLSLWGWIR*SDKELC
Trigger: ACACAGTTCTTTGTCACTTCACCTGATCCATCCCCA...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATGGGGATGGATCAGGTaGAGTGACAAAGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPWGWIR*SDKELC
Trigger: ACACAGTTCTTTGTCACTTCACCTGATCCATCCCCA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCATGGTTCAGCTTTGGTaGAGGATCCAGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: FEGYTWPLASASPLSLSLMVQLW*RIQKCS
Trigger: AGAGCATTTCTGGATCCTCCACCAAAGCTGAACCAT...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTGTTTCTTAGCTGCGTaGTGTCCTCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLCFLAA*CPPEMG
Trigger: ACCCATTTCTGGAGGACATCACGCAGCTAAGAAACA...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATGCTTCCCCCAGAGGTaGAATACGACTGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYICFPQR*NTTGDV
Trigger: CACATCTCCAGTCGTATTTCACCTCTGGGGGAAGCA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAATGGATCAGGTGAAGTaGCAAAGAACTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPMDQVK*QRTVSL
Trigger: CAGTGACACAGTTCTTTGTCACTTCACCTGATCCAT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGCCAGATTTTCCTCGGTaGGGAATTTCATATGCCTGC +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLPDFPR*GISYAC
Trigger: GCAGGCATATGAAATTCCTCACCGAGGAAAATCTGG...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCCAGTTCCTTCCAGAATaGATTTGTAGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: FEGYTWPLASASPLSLSLQFLPE*ICSFGI
Trigger: GATGCCAAAGCTACAAATCCATTCTGGAAGGAACTG...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAATGGTTCAGCTTTGGTaGAGGATCCAGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPMVQLW*RIQKCS
Trigger: AGAGCATTTCTGGATCCTCCACCAAAGCTGAACCAT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGCATCTGGCCAGTTGTaGGGCAAGCCTAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSASGQL*GKPSPC
Trigger: GCAAGGGCTAGGCTTGCCTCACAACTGGCCAGATGC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAGCATCTGGCCAGTTGTaGGGCAAGCCTAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGASGQL*GKPSPC
Trigger: GCAAGGGCTAGGCTTGCCTCACAACTGGCCAGATGC...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATCAGATTGCTTAACCTaGTTTCCAAGAGAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPSDCLT*FPREGL
Trigger: TAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTGA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTGCTTCCCCCAGAGGTaGAATACGACTGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSICFPQR*NTTGDV
Trigger: CACATCTCCAGTCGTATTTCACCTCTGGGGGAAGCA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATTCCTGTGCCAGATGTaGGTAACCCAGGACATTAGC +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIFLCQM*VTQDIS
Trigger: GCTAATGTCCTGGGTTACTCACATCTGGCACAGGAA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAATGCTTAGTGAGTCCTaGAGATTTCTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPMLSES*RFLSKF
Trigger: GAACTTGCTGAGAAATCTGCAGGACTCACTAAGCAT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCACAGTTCCTTCCAGAATaGATTTGTAGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPQFLPE*ICSFGI
Trigger: GATGCCAAAGCTACAAATCCATTCTGGAAGGAACTG...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGCTCAGAGATACCTCCTaGAATTCTCCCACAGCTATA +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLLRDTS*NSPTAI
Trigger: TATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAG...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAGACTGTAAACTTTCCTaGCACATAGTTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPDCKLS*HIVVST
Trigger: TGTGGACACAACTATGTGCCAGGAAAGTTTACAGTC...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCAAAGAACTGTGTCACTaGTTTTTCATTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: FEGYTWPLASASPLSLSLKELCH*FFIGGL
Trigger: AAGACCCCCAATGAAAAACCAGTGACACAGTTCTTT...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAACTGACCCTCCTTGGTaGTTTAATTTACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPTDPPW*FNLQTA
Trigger: TGCAGTTTGTAAATTAAATCACCAAGGAGGGTCAGT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCAGATTGCTTAACCTaGTTTCCAAGAGAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLSDCLT*FPREGL
Trigger: TAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTGA...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATTGGGGGTCTTTACCTaGACCCGGAAAACAAACAAG +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYILGVFT*TRKTNK
Trigger: CTTGTTTGTTTTCCGGGTTCAGGTAAAGACCCCCAA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTGGGGATGGATCAGGTaGAGTGACAAAGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTWGWIR*SDKELC
Trigger: ACACAGTTCTTTGTCACTTCACCTGATCCATCCCCA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTCATATGCCTGCATCTaGTGCTTAGTGAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTSYACI*CLVSPA
Trigger: TGCAGGACTCACTAAGCATCAGATGCAGGCATATGA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCCAGATTTTCCTCGGTaGGGAATTTCATATGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTPDFPR*GISYAC
Trigger: GCAGGCATATGAAATTCCTCACCGAGGAAAATCTGG...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCACTGTCCAAAGCTGATTaGAGATCTTGTAACACATCT +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPLSKAD*RSCNTS
Trigger: AGATGTGTTACAAGATCTTCAATCAGCTTTGGACAG...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTGGAGGATCCAGAAATaGTCTCAGAGATACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTWRIQK*SQRYLL
Trigger: CAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATGGAGGATCCAGAAATaGTCTCAGAGATACCTCCTG +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIWRIQK*SQRYLL
Trigger: CAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAGTGAGGAATTTCATATaGCTGCATCTGATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPVRNFI*LHLMLS
Trigger: ACTAAGCATCAGATGCAGGCATATGAAATTCCTCAC...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAAACAGCAGTAAAGCTTaGATGGAGATATTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPNSSKA*MEIFRS
Trigger: GGACCTAAATATCTCCATCCAAGCTTTACTGCTGTT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGGACTGTAAACTTTCCTaGCACATAGTTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLDCKLS*HIVVST
Trigger: TGTGGACACAACTATGTGCCAGGAAAGTTTACAGTC...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAAAAGAACTGTGTCACTaGTTTTTCATTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPKELCH*FFIGGL
Trigger: AAGACCCCCAATGAAAAACCAGTGACACAGTTCTTT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAGTTCCAGAAGATTCTTaGTTGTCAAAATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPVPEDS*LSKCHQ
Trigger: CTGATGGCATTTTGACAACCAAGAATCTTCTGGAAC...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATGTGCCACTAACTCTTaGCAATCCATTTTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPCATNS*QSIFSR
Trigger: TCTGCTAAAAATGGATTGCCAAGAGTTAGTGGCACA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
3UTR CAA 72 bp ACCCTGCCAACATCAATACGTAAGCCTCTACAGGCTTaGCTTCTCAGAATTCTGTTGAATCCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLPTSIRKPLQA*LLRILLNPLSS
Trigger: GGAAGAGAGTGGATTCAACAGAATTCTGAGAAGCAAAGCCTGTAGAGGCTTACGTATTGATGTTGGCAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCGCCCACCCAGGACTCTaGTTAATTGTATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTAHPGL*LIVFRS
Trigger: AGATCTGAATACAATTAATCAGAGTCCTGGGTGGGC...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTTGGGGGTCTTTACCTaGACCCGGAAAACAAACAAG +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILGVFT*TRKTNK
Trigger: CTTGTTTGTTTTCCGGGTTCAGGTAAAGACCCCCAA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTCATATGCCTGCATCTaGTGCTTAGTGAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSISYACI*CLVSPA
Trigger: TGCAGGACTCACTAAGCATCAGATGCAGGCATATGA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATACCACATCATCTCTGCTaGAACATCTCCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIPHHLC*NISRFS
Trigger: GGAAAATCTGGAGATGTTTCAGCAGAGATGATGTGG...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCCACATCATCTCTGCTaGAACATCTCCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTPHHLC*NISRFS
Trigger: GGAAAATCTGGAGATGTTTCAGCAGAGATGATGTGG...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCATAGTGAAAACTCCATaGATAGAGAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: FEGYTWPLASASPLSLSLIVKTP*IEKIIG
Trigger: GCCTATGATTTTCTCTATGCATGGAGTTTTCACTAT...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR CCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTCAGAGATACCTCCTaGAATTCTCCCACAGCTATA +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTLRDTS*NSPTAI
Trigger: TATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAG...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATACTCAGAGATACCTCCTaGAATTCTCCCACAGCTATA +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYILRDTS*NSPTAI
Trigger: TATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAG...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCATGGTTCAGCTTTGGTaGAGGATCCAGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTMVQLW*RIQKCS
Trigger: AGAGCATTTCTGGATCCTCCACCAAAGCTGAACCAT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGGTTCCAGAAGATTCTTaGTTGTCAAAATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLVPEDS*LSKCHQ
Trigger: CTGATGGCATTTTGACAACCAAGAATCTTCTGGAAC...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAAGTCAGACTTTTAAATaGCAAGGCAATTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPSQTFK*QGNLFQ
Trigger: CTGGAACAAATTGCCTTGCCATTTAAAAGTCTGACT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGGTAAGAAACCCTTTCTaGTTCCTTGTCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLVRNPF*FLVCLN
Trigger: ATTCAAGCAGACAAGGAACCAGAAAGGGTTTCTTAC...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CATTTACTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTGCCTCAACACAGCCCACCCAGGACTCTaGTTAATTGTATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: HLLKGFPHSFTIMLCLNTAHPGL*LIVFRS
Trigger: AGATCTGAATACAATTAATCAGAGTCCTGGGTGGGC...TGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTCAGATTGCTTAACCTaGTTTCCAAGAGAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTSDCLT*FPREGL
Trigger: TAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTGA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTATGGATCAGGTGAAGTaGCAAAGAACTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIMDQVK*QRTVSL
Trigger: CAGTGACACAGTTCTTTGTCACTTCACCTGATCCAT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGCTTCCTTTAACTTCTTaGCAACGTAAGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLLPLTS*QRKKPF
Trigger: AAAGGGTTTCTTACGTTGTCAAGAAGTTAAAGGAAG...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CATTTACTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTGCCTCAACACACCACATCATCTCTGCTaGAACATCTCCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: HLLKGFPHSFTIMLCLNTPHHLC*NISRFS
Trigger: GGAAAATCTGGAGATGTTTCAGCAGAGATGATGTGG...TGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR GCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCATGCTTAGTGAGTCCTaGAGATTTCTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTMLSES*RFLSKF
Trigger: GAACTTGCTGAGAAATCTGCAGGACTCACTAAGCAT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAATGCTTAGTGAGTCCTaGAGATTTCTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIMLSES*RFLSKF
Trigger: GAACTTGCTGAGAAATCTGCAGGACTCACTAAGCAT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATACAGTTCCTTCCAGAATaGATTTGTAGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIQFLPE*ICSFGI
Trigger: GATGCCAAAGCTACAAATCCATTCTGGAAGGAACTG...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAACTGACCCTCCTTGGTaGTTTAATTTACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYITDPPW*FNLQTA
Trigger: TGCAGTTTGTAAATTAAATCACCAAGGAGGGTCAGT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCACTGACCCTCCTTGGTaGTTTAATTTACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTTDPPW*FNLQTA
Trigger: TGCAGTTTGTAAATTAAATCACCAAGGAGGGTCAGT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAAAAACTTTCCAGTCGTaGACTTTTTCTGACACCAAG +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIKTFQS*TFSDTK
Trigger: CTTGGTGTCAGAAAAAGTTCACGACTGGAAAGTTTT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTTCCTGTGCCAGATGTaGGTAACCCAGGACATTAGC +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQFLCQM*VTQDIS
Trigger: GCTAATGTCCTGGGTTACTCACATCTGGCACAGGAA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTTCCTGTGCCAGATGTaGGTAACCCAGGACATTAGC +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSFLCQM*VTQDIS
Trigger: GCTAATGTCCTGGGTTACTCACATCTGGCACAGGAA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCAGTTCCTTCCAGAATaGATTTGTAGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIQFLPE*ICSFGI
Trigger: GATGCCAAAGCTACAAATCCATTCTGGAAGGAACTG...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTGACTGTAAACTTTCCTaGCACATAGTTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIDCKLS*HIVVST
Trigger: TGTGGACACAACTATGTGCCAGGAAAGTTTACAGTC...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAACCATTCTTTCACTTTaGACTGTCCTATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYITILSL*TVLWLL
Trigger: TAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCGTTCCAGAAGATTCTTaGTTGTCAAAATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTVPEDS*LSKCHQ
Trigger: CTGATGGCATTTTGACAACCAAGAATCTTCTGGAAC...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATGTGCCACTAACTCTTaGCAATCCATTTTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYICATNS*QSIFSR
Trigger: TCTGCTAAAAATGGATTGCCAAGAGTTAGTGGCACA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTGTGCCACTAACTCTTaGCAATCCATTTTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTCATNS*QSIFSR
Trigger: TCTGCTAAAAATGGATTGCCAAGAGTTAGTGGCACA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTGTTTCTTAGCTGCGTaGTGTCCTCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSCFLAA*CPPEMG
Trigger: ACCCATTTCTGGAGGACATCACGCAGCTAAGAAACA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATGTTTCTTAGCTGCGTaGTGTCCTCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRCFLAA*CPPEMG
Trigger: ACCCATTTCTGGAGGACATCACGCAGCTAAGAAACA...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTACTGACCCTCCTTGGTaGTTTAATTTACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSITDPPW*FNLQTA
Trigger: TGCAGTTTGTAAATTAAATCACCAAGGAGGGTCAGT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATTGGGGGTCTTTACCTaGACCCGGAAAACAAACAAG +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGLGVFT*TRKTNK
Trigger: CTTGTTTGTTTTCCGGGTTCAGGTAAAGACCCCCAA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTTGGGGGTCTTTACCTaGACCCGGAAAACAAACAAG +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSLGVFT*TRKTNK
Trigger: CTTGTTTGTTTTCCGGGTTCAGGTAAAGACCCCCAA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTGGGGATGGATCAGGTaGAGTGACAAAGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSWGWIR*SDKELC
Trigger: ACACAGTTCTTTGTCACTTCACCTGATCCATCCCCA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATACTTCCTTTAACTTCTTaGCAACGTAAGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYILPLTS*QRKKPF
Trigger: AAAGGGTTTCTTACGTTGTCAAGAAGTTAAAGGAAG...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATCATATGCCTGCATCTaGTGCTTAGTGAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRSYACI*CLVSPA
Trigger: TGCAGGACTCACTAAGCATCAGATGCAGGCATATGA...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGACCAGATTTTCCTCGGTaGGGAATTTCATATGCCTGC +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGPDFPR*GISYAC
Trigger: GCAGGCATATGAAATTCCTCACCGAGGAAAATCTGG...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCTGTCCAAAGCTGATTaGAGATCTTGTAACACATCT +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILSKAD*RSCNTS
Trigger: AGATGTGTTACAAGATCTTCAATCAGCTTTGGACAG...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATGGAGGATCCAGAAATaGTCTCAGAGATACCTCCTG +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRWRIQK*SQRYLL
Trigger: CAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCA...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTGGAGGATCCAGAAATaGTCTCAGAGATACCTCCTG +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSWRIQK*SQRYLL
Trigger: CAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATTGACATTTTTACAATaGACGAGTCCGATCTTACCT +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYILTFLQ*TSPILP
Trigger: AGGTAAGATCGGACTCGTGCATTGTAAAAATGTCAA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATCTTGGTTGTCAAAATaGCATCAGACATTGACATCA +
Preference number: 4 (lower is better)
Translates to: PASQLLHSSCHCRCHFYISWLSK*HQTLTS
Trigger: TGATGTCAATGTCTGATGGCATTTTGACAACCAAGA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTGTGAGGAATTTCATATaGCTGCATCTGATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIVRNFI*LHLMLS
Trigger: ACTAAGCATCAGATGCAGGCATATGAAATTCCTCAC...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTTGTCTTCTCTCTTCTaGAAAAATCCTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTLSSLF*KNPGRY
Trigger: ATATCTGCCAGGATTTTTCCAGAAGAGAGAAGACAA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CATTTACTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTGCCTCAACACAACCATTCTTTCACTTTaGACTGTCCTATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: HLLKGFPHSFTIMLCLNTTILSL*TVLWLL
Trigger: TAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGT...TGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR CCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTACCATTCTTTCACTTTaGACTGTCCTATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSITILSL*TVLWLL
Trigger: TAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCAGTCAGACTTTTAAATaGCAAGGCAATTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTSQTFK*QGNLFQ
Trigger: CTGGAACAAATTGCCTTGCCATTTAAAAGTCTGACT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGCCCACCCAGGACTCTaGTTAATTGTATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRAHPGL*LIVFRS
Trigger: AGATCTGAATACAATTAATCAGAGTCCTGGGTGGGC...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGCCCACCCAGGACTCTaGTTAATTGTATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSAHPGL*LIVFRS
Trigger: AGATCTGAATACAATTAATCAGAGTCCTGGGTGGGC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTATGGATCAGGTGAAGTaGCAAAGAACTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSMDQVK*QRTVSL
Trigger: CAGTGACACAGTTCTTTGTCACTTCACCTGATCCAT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAATGGATCAGGTGAAGTaGCAAAGAACTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGMDQVK*QRTVSL
Trigger: CAGTGACACAGTTCTTTGTCACTTCACCTGATCCAT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTAATGCCATCAGACATTaGCATCACTTGTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSINAIRH*HHLFFR
Trigger: TCTAAAGAACAAGTGATGTCAATGTCTGATGGCATT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTGGTTCCTTGTCTGCTTaGATTCTATTAAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIGSLSA*ILLKSS
Trigger: GGAAGATTTTAATAGAATTCAAGCAGACAAGGAACC...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp CATTTACTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTGCCTCAACACAGGTTCCTTGTCTGCTTaGATTCTATTAAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: HLLKGFPHSFTIMLCLNTGSLSA*ILLKSS
Trigger: GGAAGATTTTAATAGAATTCAAGCAGACAAGGAACC...TGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR TCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCTTCCTTTAACTTCTTaGCAACGTAAGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILPLTS*QRKKPF
Trigger: AAAGGGTTTCTTACGTTGTCAAGAAGTTAAAGGAAG...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGCCACATCATCTCTGCTaGAACATCTCCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQPHHLC*NISRFS
Trigger: GGAAAATCTGGAGATGTTTCAGCAGAGATGATGTGG...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGACCACATCATCTCTGCTaGAACATCTCCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGPHHLC*NISRFS
Trigger: GGAAAATCTGGAGATGTTTCAGCAGAGATGATGTGG...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CATTTACTGAAGGGCTTTCCTCATTCATTCACCATAATGCTCTGCCTCAACACATTGACATTTTTACAATaGACGAGTCCGATCTTACCT +
Preference number: 4 (lower is better)
Translates to: HLLKGFPHSFTIMLCLNTLTFLQ*TSPILP
Trigger: AGGTAAGATCGGACTCGTGCATTGTAAAAATGTCAA...TGTGTTGAGGCAGAGCATTATGGTGAATGAATGAGGAAAGCCCTTCAGTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR GCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTTGACATTTTTACAATaGACGAGTCCGATCTTACCT +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILTFLQ*TSPILP
Trigger: AGGTAAGATCGGACTCGTGCATTGTAAAAATGTCAA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTCTTGGTTGTCAAAATaGCATCAGACATTGACATCA +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSISWLSK*HQTLTS
Trigger: TGATGTCAATGTCTGATGGCATTTTGACAACCAAGA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCATAGTGAAAACTCCATaGATAGAGAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTIVKTP*IEKIIG
Trigger: GCCTATGATTTTCTCTATGCATGGAGTTTTCACTAT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTCTCAGAGATACCTCCTaGAATTCTCCCACAGCTATA +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSLRDTS*NSPTAI
Trigger: TATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAG...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGACTCAGAGATACCTCCTaGAATTCTCCCACAGCTATA +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRLRDTS*NSPTAI
Trigger: TATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAG...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATGGTTCAGCTTTGGTaGAGGATCCAGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQMVQLW*RIQKCS
Trigger: AGAGCATTTCTGGATCCTCCACCAAAGCTGAACCAT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTTGTCTTCTCTCTTCTaGAAAAATCCTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILSSLF*KNPGRY
Trigger: ATATCTGCCAGGATTTTTCCAGAAGAGAGAAGACAA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTCAGATTGCTTAACCTaGTTTCCAAGAGAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQSDCLT*FPREGL
Trigger: TAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTGA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATCAGATTGCTTAACCTaGTTTCCAAGAGAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGSDCLT*FPREGL
Trigger: TAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTGA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAATGCTTAGTGAGTCCTaGAGATTTCTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRMLSES*RFLSKF
Trigger: GAACTTGCTGAGAAATCTGCAGGACTCACTAAGCAT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTATGCTTAGTGAGTCCTaGAGATTTCTCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSMLSES*RFLSKF
Trigger: GAACTTGCTGAGAAATCTGCAGGACTCACTAAGCAT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTATAGTGAAAACTCCATaGATAGAGAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIIVKTP*IEKIIG
Trigger: GCCTATGATTTTCTCTATGCATGGAGTTTTCACTAT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGACAGTTCCTTCCAGAATaGATTTGTAGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGQFLPE*ICSFGI
Trigger: GATGCCAAAGCTACAAATCCATTCTGGAAGGAACTG...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGGACTGTAAACTTTCCTaGCACATAGTTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQDCKLS*HIVVST
Trigger: TGTGGACACAACTATGTGCCAGGAAAGTTTACAGTC...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAAAACTTTCCAGTCGTaGACTTTTTCTGACACCAAG +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGKTFQS*TFSDTK
Trigger: CTTGGTGTCAGAAAAAGTTCACGACTGGAAAGTTTT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTAAAACTTTCCAGTCGTaGACTTTTTCTGACACCAAG +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSKTFQS*TFSDTK
Trigger: CTTGGTGTCAGAAAAAGTTCACGACTGGAAAGTTTT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAAACTTTCCAGTCGTaGACTTTTTCTGACACCAAG +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQKTFQS*TFSDTK
Trigger: CTTGGTGTCAGAAAAAGTTCACGACTGGAAAGTTTT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGCTGTCCAAAGCTGATTaGAGATCTTGTAACACATCT +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQLSKAD*RSCNTS
Trigger: AGATGTGTTACAAGATCTTCAATCAGCTTTGGACAG...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTCTGTCCAAAGCTGATTaGAGATCTTGTAACACATCT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSLSKAD*RSCNTS
Trigger: AGATGTGTTACAAGATCTTCAATCAGCTTTGGACAG...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGTGAGGAATTTCATATaGCTGCATCTGATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSVRNFI*LHLMLS
Trigger: ACTAAGCATCAGATGCAGGCATATGAAATTCCTCAC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGTGAGGAATTTCATATaGCTGCATCTGATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRVRNFI*LHLMLS
Trigger: ACTAAGCATCAGATGCAGGCATATGAAATTCCTCAC...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAGTGAGGAATTTCATATaGCTGCATCTGATGCTTAGT +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGVRNFI*LHLMLS
Trigger: ACTAAGCATCAGATGCAGGCATATGAAATTCCTCAC...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAACAGCAGTAAAGCTTaGATGGAGATATTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQNSSKA*MEIFRS
Trigger: GGACCTAAATATCTCCATCCAAGCTTTACTGCTGTT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAACAGCAGTAAAGCTTaGATGGAGATATTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGNSSKA*MEIFRS
Trigger: GGACCTAAATATCTCCATCCAAGCTTTACTGCTGTT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAAAGAACTGTGTCACTaGTTTTTCATTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGKELCH*FFIGGL
Trigger: AAGACCCCCAATGAAAAACCAGTGACACAGTTCTTT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAAAGAACTGTGTCACTaGTTTTTCATTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRKELCH*FFIGGL
Trigger: AAGACCCCCAATGAAAAACCAGTGACACAGTTCTTT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTAAAGAACTGTGTCACTaGTTTTTCATTGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSKELCH*FFIGGL
Trigger: AAGACCCCCAATGAAAAACCAGTGACACAGTTCTTT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAACCATTCTTTCACTTTaGACTGTCCTATGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGTILSL*TVLWLL
Trigger: TAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGTTCCAGAAGATTCTTaGTTGTCAAAATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSVPEDS*LSKCHQ
Trigger: CTGATGGCATTTTGACAACCAAGAATCTTCTGGAAC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGGTAAGAAACCCTTTCTaGTTCCTTGTCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQVRNPF*FLVCLN
Trigger: ATTCAAGCAGACAAGGAACCAGAAAGGGTTTCTTAC...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAGTAAGAAACCCTTTCTaGTTCCTTGTCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGVRNPF*FLVCLN
Trigger: ATTCAAGCAGACAAGGAACCAGAAAGGGTTTCTTAC...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGTAAGAAACCCTTTCTaGTTCCTTGTCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRVRNPF*FLVCLN
Trigger: ATTCAAGCAGACAAGGAACCAGAAAGGGTTTCTTAC...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATGTGCCACTAACTCTTaGCAATCCATTTTTAGCAGA +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGCATNS*QSIFSR
Trigger: TCTGCTAAAAATGGATTGCCAAGAGTTAGTGGCACA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAATGCCATCAGACATTaGCATCACTTGTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRNAIRH*HHLFFR
Trigger: TCTAAAGAACAAGTGATGTCAATGTCTGATGGCATT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAATGCCATCAGACATTaGCATCACTTGTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGNAIRH*HHLFFR
Trigger: TCTAAAGAACAAGTGATGTCAATGTCTGATGGCATT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGGTTCCTTGTCTGCTTaGATTCTATTAAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRGSLSA*ILLKSS
Trigger: GGAAGATTTTAATAGAATTCAAGCAGACAAGGAACC...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGGTTCCTTGTCTGCTTaGATTCTATTAAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSGSLSA*ILLKSS
Trigger: GGAAGATTTTAATAGAATTCAAGCAGACAAGGAACC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR TCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTCTTCCTTTAACTTCTTaGCAACGTAAGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSLPLTS*QRKKPF
Trigger: AAAGGGTTTCTTACGTTGTCAAGAAGTTAAAGGAAG...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAACACCTGCTTCCAATTaGCTTTGTGCAATTACTTTT +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGTPASN*LCAITF
Trigger: AAAAGTAATTGCACAAAGGCAATTGGAAGCAGGTGT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTTGACATTTTTACAATaGACGAGTCCGATCTTACCT +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSLTFLQ*TSPILP
Trigger: AGGTAAGATCGGACTCGTGCATTGTAAAAATGTCAA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATCTTGGTTGTCAAAATaGCATCAGACATTGACATCA +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRSWLSK*HQTLTS
Trigger: TGATGTCAATGTCTGATGGCATTTTGACAACCAAGA...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTTGTCTTCTCTCTTCTaGAAAAATCCTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQLSSLF*KNPGRY
Trigger: ATATCTGCCAGGATTTTTCCAGAAGAGAGAAGACAA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATTGTCTTCTCTCTTCTaGAAAAATCCTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGLSSLF*KNPGRY
Trigger: ATATCTGCCAGGATTTTTCCAGAAGAGAGAAGACAA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAGTCAGACTTTTAAATaGCAAGGCAATTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRSQTFK*QGNLFQ
Trigger: CTGGAACAAATTGCCTTGCCATTTAAAAGTCTGACT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CCA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGTCAGACTTTTAAATaGCAAGGCAATTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQSQTFK*QGNLFQ
Trigger: CTGGAACAAATTGCCTTGCCATTTAAAAGTCTGACT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAATAGTGAAAACTCCATaGATAGAGAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: CILIMGENFQLDIVSRCRIVKTP*IEKIIG
Trigger: GCCTATGATTTTCTCTATGCATGGAGTTTTCACTAT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR GCA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTATAGTGAAAACTCCATaGATAGAGAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSIVKTP*IEKIIG
Trigger: GCCTATGATTTTCTCTATGCATGGAGTTTTCACTAT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGTACTTTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCCCTCCAGAAATGGGTTaGAGGCAGACAGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CTFEGYTWPLASASPLSLPPEMG*RQTVPS
Trigger: GGAAGGAACTGTCTGCCTCAAACCCATTTCTGGAGG...GAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAAAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAGCGAGCCAACTGACGTaGACTAAGCCAAGCCATTTT +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPASQLT*TKPSHF
Trigger: AAAATGGCTTGGCTTAGTCAACGTCAGTTGGCTCGC...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGCTCTGCAATTTGTGTTaGAGCCCACCCAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLLCNLC*SPPRTL
Trigger: CAGAGTCCTGGGTGGGCTCAAACACAAATTGCAGAG...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCGATCATGGTTCAGCTTaGGTGGAGGATCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: FEGYTWPLASASPLSLSLDHGSA*VEDPEM
Trigger: CATTTCTGGATCCTCCACCAAAGCTGAACCATGATC...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS CCA 90 bp CTCGGAGGACTCCTACGTACCATTCTTTCACTTTGGACTGTCCTATaGCTCTTACTGTACCTTCTCCAAGAAGGGCAATTGTGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: LGGLLRTILSLWTVL*LLLYLLQEGQLCPL
Trigger: AAGGGGACACAATTGCCCTTCTTGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAGTCCTCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp GTCCGATCTTACCTCGGAGGACTCCTACGTACCATTCTTTCACTTTaGACTGTCCTATGGCTCTTACTGTACCTTCTCCAAGAAGGGCAA +
Preference number: 5 (lower is better)
Translates to: VRSYLGGLLRTILSL*TVLWLLLYLLQEGQ
Trigger: TTGCCCTTCTTGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAGTCCTCCGAGGTAAGATCGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 90 bp GATACCTCCTGGAATTCTCCCACAGCTATATGTCCTTGGGGTATATaGATAGTGATGTCTGAGTCGGGTAATTGGACTGACCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: DTSWNSPTAICPWGI*IVMSESGNWTDPPW
Trigger: CCAAGGAGGGTCAGTCCAATTACCCGACTCAGACATCACTATTCATATACCCCAAGGACATATAGCTGTGGGAGAATTCCAGGAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp CAAGAGAGGGCTTACAGTACAAGAGAGATCATGGTTCAGCTTTGGTaGAGGATCCAGAAATGCTCTCAGAGATACCTCCTGGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: QERAYSTREIMVQLW*RIQKCSQRYLLEFS
Trigger: GGAGAATTCCAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTCTCTTGTACTGTAAGCCCTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATACCTCCAGAAATGGGTTaGAGGCAGACAGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIPPEMG*RQTVPS
Trigger: GGAAGGAACTGTCTGCCTCAAACCCATTTCTGGAGG...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGGATCATGGTTCAGCTTaGGTGGAGGATCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLDHGSA*VEDPEM
Trigger: CATTTCTGGATCCTCCACCAAAGCTGAACCATGATC...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS GCA 90 bp AGTACAAGAGAGATCATGGTTCAGCTTTGGTGGAGGATCCAGAAATaGTCTCAGAGATACCTCCTGGAATTCTCCCACAGCTATATGTCC +
Preference number: 5 (lower is better)
Translates to: STREIMVQLWWRIQK*SQRYLLEFSHSYMS
Trigger: GGACATATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTCTCTTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS GCA 90 bp TCGGTGAGGAATTTCATATGCCTGCATCTGATGCTTAGTGAGTCCTaGAGATTTCTCAGCAAGTTCCCTCCAGCTTCTTCCAAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SVRNFICLHLMLSES*RFLSKFPPASSKFH
Trigger: GTGAAACTTGGAAGAAGCTGGAGGGAACTTGCTGAGAAATCTGCAGGACTCACTAAGCATCAGATGCAGGCATATGAAATTCCTCACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp TTCCAAGAGAGGGCTTACAGTACAAGAGAGATCATGGTTCAGCTTTaGTGGAGGATCCAGAAATGCTCTCAGAGATACCTCCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: FQERAYSTREIMVQL*WRIQKCSQRYLLEF
Trigger: GAATTCCAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTCTCTTGTACTGTAAGCCCTCTCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCTCTGCAATTTGTGTTaGAGCCCACCCAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILCNLC*SPPRTL
Trigger: CAGAGTCCTGGGTGGGCTCAAACACAAATTGCAGAG...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCCATTTTAGTCATGACTaGGCTCAGAGGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FEGYTWPLASASPLSLSLHFSHD*AQRICF
Trigger: AAAACAGATCCTCTGAGCCAAGTCATGACTAAAATG...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR CAA 90 bp TTTGAAGGTTATACCTGGCCCCTAGCCTCTGCTTCTCCTCTCTCTCTCTCTCTCAATAAAGGCACTCTCTaGTCTTCTCTCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: FEGYTWPLASASPLSLSLNKGTL*SSLFWK
Trigger: TTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATT...GAGAGAGAGAGAGAGAGGAGAAGCAGAGGCTAGGGGCCAGGTATAACCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221866.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCACCAGAAGATTCTTGGTaGTCAAAATGCCATCAGACA +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPPEDSW*SKCHQT
Trigger: TGTCTGATGGCATTTTGACAACCAAGAATCTTCTGG...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGAATGGATTTGTAGCTTaGGCATCACTATCACGATGG +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLNGFVA*ASLSRW
Trigger: CCATCGTGATAGTGATGCCAAAGCTACAAATCCATT...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTGCGAGCCAACTGACGTaGACTAAGCCAAGCCATTTT +
Preference number: 5 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIASQLT*TKPSHF
Trigger: AAAATGGCTTGGCTTAGTCAACGTCAGTTGGCTCGC...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATCCATGGTATTCAGATaGCTTAACCTGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPSMVFR*LNLISK
Trigger: CTTGGAAATCAGGTTAAGCAATCTGAATACCATGGA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCACTCCAAGAAGGGCAATaGTGTCCCCTTTTAAATATT +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPLQEGQ*CPLLNI
Trigger: AATATTTAAAAGGGGACACAATTGCCCTTCTTGGAG...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAAAATGGCAAGGCAATTaGTTCCAGAAGATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPKWQGN*FQKILG
Trigger: ACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGCATTTTAGTCATGACTaGGCTCAGAGGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLHFSHD*AQRICF
Trigger: AAAACAGATCCTCTGAGCCAAGTCATGACTAAAATG...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCATGCTTCCAATTGCCTTaGTGCAATTACTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPCFQLP*CNYFSF
Trigger: GAAAGAAAAGTAATTGCACAAAGGCAATTGGAAGCA...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGAGAAAAGAAAACTTGTaGATGAACTACCACACCTGC +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLRKENL*MNYHTC
Trigger: GCAGGTGTGGTAGTTCATCAACAAGTTTTCTTTTCT...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGAATAAAGGCACTCTCTaGTCTTCTCTCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLNKGTL*SSLFWK
Trigger: TTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATT...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTCCACTATCTGAAGGATCCAATAGTCAATCTTATTTaGCCTCAGTACTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CPSIPFNPEVSVHYLKDPIVNLI*PQYCLQ
Trigger: CTGAAGACAGTACTGAGGCAAAATAAGATTGACTAT...TGGATCCTTCAGATAGTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTGTTCCAGAAGATTCTaGGTTGTCAAAATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLCSRRF*VVKMPS
Trigger: TGATGGCATTTTGACAACCAAGAATCTTCTGGAACA...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCAATGGATTTGTAGCTTaGGCATCACTATCACGATGG +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTNGFVA*ASLSRW
Trigger: CCATCGTGATAGTGATGCCAAAGCTACAAATCCATT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGTTATCTCTCTTTTTGTaGTTTCTTAGCTGCGTGATG +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLLSLFL*FLSCVM
Trigger: CATCACGCAGCTAAGAAACAACAAAAAGAGAGATAA...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGACTCTGCAATTTGTGTTaGAGCCCACCCAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGLCNLC*SPPRTL
Trigger: CAGAGTCCTGGGTGGGCTCAAACACAAATTGCAGAG...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTCTCTGCAATTTGTGTTaGAGCCCACCCAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSLCNLC*SPPRTL
Trigger: CAGAGTCCTGGGTGGGCTCAAACACAAATTGCAGAG...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCTGAGGTGTCTGATAGTCAATCTTATTTaGCCTCAGTACTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LYLCLTPVPLFPSTLRCLIVNLI*PQYCLQ
Trigger: CTGAAGACAGTACTGAGGCAAAATAAGATTGACTAT...CAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATACCAGAAGATTCTTGGTaGTCAAAATGCCATCAGACA +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIPEDSW*SKCHQT
Trigger: TGTCTGATGGCATTTTGACAACCAAGAATCTTCTGG...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp CAGCTTCTTCCAAGTTTCACAGCTGAAGTCAGAATAACAGCCTCTTaGATAAGATGTGCCACTAACTCTTGGCAATCCATTTTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: QLLPSFTAEVRITAS*IRCATNSWQSIFSR
Trigger: TCTGCTAAAAATGGATTGCCAAGAGTTAGTGGCACATCTTATCCAAGAGGCTGTTATTCTGACTTCAGCTGTGAAACTTGGAAGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAAGAGCTATGTATACTTaGATGAGTGTGTGTCCTATC +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIRAMYT*MSVCPI
Trigger: GATAGGACACACACTCATCAAAGTATACATAGCTCT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGCGAGCCAACTGACGTaGACTAAGCCAAGCCATTTT +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSASQLT*TKPSHF
Trigger: AAAATGGCTTGGCTTAGTCAACGTCAGTTGGCTCGC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGGCGAGCCAACTGACGTaGACTAAGCCAAGCCATTTT +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQASQLT*TKPSHF
Trigger: AAAATGGCTTGGCTTAGTCAACGTCAGTTGGCTCGC...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTCCATGGTATTCAGATaGCTTAACCTGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTSMVFR*LNLISK
Trigger: CTTGGAAATCAGGTTAAGCAATCTGAATACCATGGA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCCATTTTAGTCATGACTaGGCTCAGAGGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTHFSHD*AQRICF
Trigger: AAAACAGATCCTCTGAGCCAAGTCATGACTAAAATG...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCAGAAAAGAAAACTTGTaGATGAACTACCACACCTGC +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTRKENL*MNYHTC
Trigger: GCAGGTGTGGTAGTTCATCAACAAGTTTTCTTTTCT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCAATAAAGGCACTCTCTaGTCTTCTCTCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTNKGTL*SSLFWK
Trigger: TTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATGTTCCAGAAGATTCTaGGTTGTCAAAATGCCATCA +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYICSRRF*VVKMPS
Trigger: TGATGGCATTTTGACAACCAAGAATCTTCTGGAACA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCAAATGGCAAGGCAATTaGTTCCAGAAGATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTKWQGN*FQKILG
Trigger: ACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTT...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAAAATGGCAAGGCAATTaGTTCCAGAAGATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIKWQGN*FQKILG
Trigger: ACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp GTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCCCTTCAACCTTATCTCTCTTTTTGTaGTTTCTTAGCTGCGTGATG +
Preference number: 5 (lower is better)
Translates to: VLLPLYLCLTPVPLFPSTLSLFL*FLSCVM
Trigger: CATCACGCAGCTAAGAAACAACAAAAAGAGAGATAA...GGTTGAAGGGAATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTAGAGCTATGTATACTTaGATGAGTGTGTGTCCTATC +
Preference number: 5 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIRAMYT*MSVCPI
Trigger: GATAGGACACACACTCATCAAAGTATACATAGCTCT...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTGATCATGGTTCAGCTTaGGTGGAGGATCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSDHGSA*VEDPEM
Trigger: CATTTCTGGATCCTCCACCAAAGCTGAACCATGATC...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGGATCATGGTTCAGCTTaGGTGGAGGATCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQDHGSA*VEDPEM
Trigger: CATTTCTGGATCCTCCACCAAAGCTGAACCATGATC...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAGATCATGGTTCAGCTTaGGTGGAGGATCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGDHGSA*VEDPEM
Trigger: CATTTCTGGATCCTCCACCAAAGCTGAACCATGATC...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTCCATGGTATTCAGATaGCTTAACCTGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSISMVFR*LNLISK
Trigger: CTTGGAAATCAGGTTAAGCAATCTGAATACCATGGA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTCATTTTAGTCATGACTaGGCTCAGAGGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSIHFSHD*AQRICF
Trigger: AAAACAGATCCTCTGAGCCAAGTCATGACTAAAATG...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATATGCTTCCAATTGCCTTaGTGCAATTACTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYICFQLP*CNYFSF
Trigger: GAAAGAAAAGTAATTGCACAAAGGCAATTGGAAGCA...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CCAGCCTCACAGCTTCTCCATAGCAGCTGTCATTGTAGATGCCATTTTTACATAATAGTCAATCTTATTTaGCCTCAGTACTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: PASQLLHSSCHCRCHFYIIVNLI*PQYCLQ
Trigger: CTGAAGACAGTACTGAGGCAAAATAAGATTGACTAT...TATGTAAAAATGGCATCTACAATGACAGCTGCTATGGAGAAGCTGTGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp CTCCAGTCTTGTCCTTTTACCTTTATACCTTTGTCTTACCCCTGTCCCTCTATTTTATCTCTCTTTTTGTaGTTTCTTAGCTGCGTGATG +
Preference number: 5 (lower is better)
Translates to: LQSCPFTFIPLSYPCPSILSLFL*FLSCVM
Trigger: CATCACGCAGCTAAGAAACAACAAAAAGAGAGATAA...AATAGAGGGACAGGGGTAAGACAAAGGTATAAAGGTAAAAGGACAAGACTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 90 bp ACTTCCTGGTATTTCTATCTTCATGGCAATCTTCCTTTAACTTCTTaGCAACGTAAGAAACCCTTTCTGGTTCCTTGTCTGCTTGAATTC +
Preference number: 5 (lower is better)
Translates to: TSWYFYLHGNLPLTS*QRKKPFLVPCLLEF
Trigger: GAATTCAAGCAGACAAGGAACCAGAAAGGGTTTCTTACGTTGTCAAGAAGTTAAAGGAAGATTGCCATGAAGATAGAAATACCAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp TCCAATAGAGGTGGTTTTGTGGATATAATCCCAAATAGTAGCAGCTaGTGGATGAATGATCGTAGCTTGTACAGCTATGACTATATACAT +
Preference number: 5 (lower is better)
Translates to: SNRGGFVDIIPNSSS*WMNDRSLYSYDYIH
Trigger: ATGTATATAGTCATAGCTGTACAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGGGATTATATCCACAAAACCACCTCTATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp TGGCACATAGTTGTGTCCACAAACAGTGAAAACAGCAGTAAAGCTTaGATGGAGATATTTAGGTCCATAAATTCCAATAGAGGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: WHIVVSTNSENSSKA*MEIFRSINSNRGGF
Trigger: AAAACCACCTCTATTGGAATTTATGGACCTAAATATCTCCATCCAAGCTTTACTGCTGTTTTCACTGTTTGTGGACACAACTATGTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAATGGATTTGTAGCTTaGGCATCACTATCACGATGG +
Preference number: 5 (lower is better)
Translates to: CILIMGENFQLDIVSRCRNGFVA*ASLSRW
Trigger: CCATCGTGATAGTGATGCCAAAGCTACAAATCCATT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTCCAGAAGATTCTTGGTaGTCAAAATGCCATCAGACA +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSPEDSW*SKCHQT
Trigger: TGTCTGATGGCATTTTGACAACCAAGAATCTTCTGG...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGACCAGAAGATTCTTGGTaGTCAAAATGCCATCAGACA +
Preference number: 5 (lower is better)
Translates to: CILIMGENFQLDIVSRCRPEDSW*SKCHQT
Trigger: TGTCTGATGGCATTTTGACAACCAAGAATCTTCTGG...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp AATAGAGGTGGTTTTGTGGATATAATCCCAAATAGTAGCAGCTGGTaGATGAATGATCGTAGCTTGTACAGCTATGACTATATACATTAC +
Preference number: 5 (lower is better)
Translates to: NRGGFVDIIPNSSSW*MNDRSLYSYDYIHY
Trigger: GTAATGTATATAGTCATAGCTGTACAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGGGATTATATCCACAAAACCACCTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGAGCTATGTATACTTaGATGAGTGTGTGTCCTATC +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQRAMYT*MSVCPI
Trigger: GATAGGACACACACTCATCAAAGTATACATAGCTCT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAGAGCTATGTATACTTaGATGAGTGTGTGTCCTATC +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGRAMYT*MSVCPI
Trigger: GATAGGACACACACTCATCAAAGTATACATAGCTCT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATCCATGGTATTCAGATaGCTTAACCTGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGSMVFR*LNLISK
Trigger: CTTGGAAATCAGGTTAAGCAATCTGAATACCATGGA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTCCATGGTATTCAGATaGCTTAACCTGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQSMVFR*LNLISK
Trigger: CTTGGAAATCAGGTTAAGCAATCTGAATACCATGGA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGACATTTTAGTCATGACTaGGCTCAGAGGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGHFSHD*AQRICF
Trigger: AAAACAGATCCTCTGAGCCAAGTCATGACTAAAATG...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAGAAAAGAAAACTTGTaGATGAACTACCACACCTGC +
Preference number: 5 (lower is better)
Translates to: CILIMGENFQLDIVSRCRRKENL*MNYHTC
Trigger: GCAGGTGTGGTAGTTCATCAACAAGTTTTCTTTTCT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAGAAAAGAAAACTTGTaGATGAACTACCACACCTGC +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQRKENL*MNYHTC
Trigger: GCAGGTGTGGTAGTTCATCAACAAGTTTTCTTTTCT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAATAAAGGCACTCTCTaGTCTTCTCTCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGNKGTL*SSLFWK
Trigger: TTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGAAATAAAGGCACTCTCTaGTCTTCTCTCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: CILIMGENFQLDIVSRCRNKGTL*SSLFWK
Trigger: TTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATT...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGACTCCAAGAAGGGCAATaGTGTCCCCTTTTAAATATT +
Preference number: 5 (lower is better)
Translates to: CILIMGENFQLDIVSRCRLQEGQ*CPLLNI
Trigger: AATATTTAAAAGGGGACACAATTGCCCTTCTTGGAG...TCTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTGTTCCAGAAGATTCTaGGTTGTCAAAATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQCSRRF*VVKMPS
Trigger: TGATGGCATTTTGACAACCAAGAATCTTCTGGAACA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATGTTCCAGAAGATTCTaGGTTGTCAAAATGCCATCA +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGCSRRF*VVKMPS
Trigger: TGATGGCATTTTGACAACCAAGAATCTTCTGGAACA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTGTTCCAGAAGATTCTaGGTTGTCAAAATGCCATCA +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSCSRRF*VVKMPS
Trigger: TGATGGCATTTTGACAACCAAGAATCTTCTGGAACA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTAAATGGCAAGGCAATTaGTTCCAGAAGATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSKWQGN*FQKILG
Trigger: ACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGAAAATGGCAAGGCAATTaGTTCCAGAAGATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGKWQGN*FQKILG
Trigger: ACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTT...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 90 bp CACCAAGGTCAATACAACAGAGTATATATAAGTCAGACTTTTAAATaGCAAGGCAATTTGTTCCAGAAGATTCTTGGTTGTCAAAATGCC +
Preference number: 5 (lower is better)
Translates to: HQGQYNRVYISQTFK*QGNLFQKILGCQNA
Trigger: GGCATTTTGACAACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTTAAAAGTCTGACTTATATATACTCTGTTGTATTGACCTTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp ACACAGAGCATGTCTTCATGTGAGCATATACACAAATATGTCAGTATCTTAGGATTATCTCTCTTTTTGTaGTTTCTTAGCTGCGTGATG +
Preference number: 5 (lower is better)
Translates to: TQSMSSCEHIHKYVSILGLSLFL*FLSCVM
Trigger: CATCACGCAGCTAAGAAACAACAAAAAGAGAGATAA...TCCTAAGATACTGACATATTTGTGTATATGCTCACATGAAGACATGCTCTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTTATCTCTCTTTTTGTaGTTTCTTAGCTGCGTGATG +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQLSLFL*FLSCVM
Trigger: CATCACGCAGCTAAGAAACAACAAAAAGAGAGATAA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGTGCTTCCAATTGCCTTaGTGCAATTACTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQCFQLP*CNYFSF
Trigger: GAAAGAAAAGTAATTGCACAAAGGCAATTGGAAGCA...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTTGCTTCCAATTGCCTTaGTGCAATTACTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSCFQLP*CNYFSF
Trigger: GAAAGAAAAGTAATTGCACAAAGGCAATTGGAAGCA...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TTGCATTCTGATCATGGGAGAAAACTTCCAATTAGATATAGTCTCAAGATGCAGATAGTCAATCTTATTTaGCCTCAGTACTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LHSDHGRKLPIRYSLKMQIVNLI*PQYCLQ
Trigger: CTGAAGACAGTACTGAGGCAAAATAAGATTGACTAT...CTGCATCTTGAGACTATATCTAATTGGAAGTTTTCTCCCATGATCAGAATGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS-3UTR CAA 90 bp TACTTTATTCACCGTATCCAAGTTACCTTTGAGGTGTATCTTTCCTTCCTAAGTATAGTCAATCTTATTTaGCCTCAGTACTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: YFIHRIQVTFEVYLSFLSIVNLI*PQYCLQ
Trigger: CTGAAGACAGTACTGAGGCAAAATAAGATTGACTAT...ACTTAGGAAGGAAAGATACACCTCAAAGGTAACTTGGATACGGTGAATAAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS GCA 72 bp GAGATCATGGTTCAGCTTTGGTGGAGGATCCAGAAATaGTCTCAGAGATACCTCCTGGAATTCTCCCACAGC +
Preference number: 6 (lower is better)
Translates to: EIMVQLWWRIQK*SQRYLLEFSHS
Trigger: GCTGTGGGAGAATTCCAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 90 bp AGTCCGATCTTACCTCGGAGGACTCCTACGTACCATTCTTTCACTTaGGACTGTCCTATGGCTCTTACTGTACCTTCTCCAAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SPILPRRTPTYHSFT*DCPMALTVPSPRRA
Trigger: TGCCCTTCTTGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAGTCCTCCGAGGTAAGATCGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp GCTTACAGTACAAGAGAGATCATGGTTCAGCTTTGGTaGAGGATCCAGAAATGCTCTCAGAGATACCTCCTG +
Preference number: 6 (lower is better)
Translates to: AYSTREIMVQLW*RIQKCSQRYLL
Trigger: CAGGAGGTATCTCTGAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTCTCTTGTACTGTAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp AGGGCTTACAGTACAAGAGAGATCATGGTTCAGCTTTaGTGGAGGATCCAGAAATGCTCTCAGAGATACCTC +
Preference number: 6 (lower is better)
Translates to: RAYSTREIMVQL*WRIQKCSQRYL
Trigger: GAGGTATCTCTGAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTCTCTTGTACTGTAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp TACCTCGGAGGACTCCTACGTACCATTCTTTCACTTTaGACTGTCCTATGGCTCTTACTGTACCTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: YLGGLLRTILSL*TVLWLLLYLLQ
Trigger: TTGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAGTCCTCCGAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 72 bp TTACCTCGGAGGACTCCTACGTACCATTCTTTCACTTaGGACTGTCCTATGGCTCTTACTGTACCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LPRRTPTYHSFT*DCPMALTVPSP
Trigger: TGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAGTCCTCCGAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 72 bp CTTCCTGACTTCCGAGAGGAAGATGACTTAAACCCCTaGTCCATGTCAAGTTCATCACCAGAGGAGTCAAAA +
Preference number: 6 (lower is better)
Translates to: LPDFREEDDLNP*SMSSSSPEESK
Trigger: TTTTGACTCCTCTGGTGATGAACTTGACATGGATCAGGGGTTTAAGTCATCTTCCTCTCGGAAGTCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp ATTTCCAAGAGAGGGCTTACAGTACAAGAGAGATCATaGTTCAGCTTTGGTGGAGGATCCAGAAATGCTCTC +
Preference number: 6 (lower is better)
Translates to: ISKRGLTVQERS*FSFGGGSRNAL
Trigger: GAGAGCATTTCTGGATCCTCCACCAAAGCTGAACCATGATCTCTCTTGTACTGTAAGCCCTCTCTTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp CTCCTACGTACCATTCTTTCACTTTGGACTGTCCTATaGCTCTTACTGTACCTTCTCCAAGAAGGGCAATTG +
Preference number: 6 (lower is better)
Translates to: LLRTILSLWTVL*LLLYLLQEGQL
Trigger: CAATTGCCCTTCTTGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 72 bp TGGAATTCTCCCACAGCTATATGTCCTTGGGGTATATaGATAGTGATGTCTGAGTCGGGTAATTGGACTGAC +
Preference number: 6 (lower is better)
Translates to: WNSPTAICPWGI*IVMSESGNWTD
Trigger: GTCAGTCCAATTACCCGACTCAGACATCACTATTCATATACCCCAAGGACATATAGCTGTGGGAGAATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp TCCACCCTTCCTAATGTCAGAGACTGTAAACTTTCCTaGCACATAGTTGTGTCCACAAACAGTGAAAACAGC +
Preference number: 6 (lower is better)
Translates to: STLPNVRDCKLS*HIVVSTNSENS
Trigger: GCTGTTTTCACTGTTTGTGGACACAACTATGTGCCAGGAAAGTTTACAGTCTCTGACATTAGGAAGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp GGTGGTTTTGTGGATATAATCCCAAATAGTAGCAGCTaGTGGATGAATGATCGTAGCTTGTACAGCTATGAC +
Preference number: 6 (lower is better)
Translates to: GGFVDIIPNSSS*WMNDRSLYSYD
Trigger: GTCATAGCTGTACAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGGGATTATATCCACAAAACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp CCAAGTTTCACAGCTGAAGTCAGAATAACAGCCTCTTaGATAAGATGTGCCACTAACTCTTGGCAATCCATT +
Preference number: 6 (lower is better)
Translates to: PSFTAEVRITAS*IRCATNSWQSI
Trigger: AATGGATTGCCAAGAGTTAGTGGCACATCTTATCCAAGAGGCTGTTATTCTGACTTCAGCTGTGAAACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 72 bp ATGTCTGAGTCGGGTAATTGGACTGACCCTCCTTGGTaGTTTAATTTACAAACTGCAATGGTCTCTGCAATT +
Preference number: 6 (lower is better)
Translates to: MSESGNWTDPPW*FNLQTAMVSAI
Trigger: AATTGCAGAGACCATTGCAGTTTGTAAATTAAATCACCAAGGAGGGTCAGTCCAATTACCCGACTCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 72 bp CCAAATAGTAGCAGCTGGTGGATGAATGATCGTAGCTaGTACAGCTATGACTATATACATTACATGGCTCAG +
Preference number: 6 (lower is better)
Translates to: PNSSSWWMNDRS*YSYDYIHYMAQ
Trigger: CTGAGCCATGTAATGTATATAGTCATAGCTGTACAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 90 bp GCTCCAGTTTTCATCTCCAACAAAATAGCTTCCATGGTATTCAGATaGCTTAACCTGATTTCCAAGAGAGGGCTTACAGTACAAGAGAGA +
Preference number: 6 (lower is better)
Translates to: APVFISNKIASMVFR*LNLISKRGLTVQER
Trigger: TCTCTCTTGTACTGTAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTGAATACCATGGAAGCTATTTTGTTGGAGATGAAAACTGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 90 bp AAAGTGGGATACTTAACAAGTCCTGTCGACAATAAAGGCACTCTCTaGTCTTCTCTCTTCTGGAAAAATCCTGGCAGATATGAGAACCTT +
Preference number: 6 (lower is better)
Translates to: KVGYLTSPVDNKGTL*SSLFWKNPGRYENL
Trigger: AAGGTTCTCATATCTGCCAGGATTTTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATTGTCGACAGGACTTGTTAAGTATCCCACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 90 bp GATATAATCCCAAATAGTAGCAGCTGGTGGATGAATGATCGTAGCTaGTACAGCTATGACTATATACATTACATGGCTCAGGTCAAGAAG +
Preference number: 6 (lower is better)
Translates to: DIIPNSSSWWMNDRS*YSYDYIHYMAQVKK
Trigger: CTTCTTGACCTGAGCCATGTAATGTATATAGTCATAGCTGTACAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGGGATTATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 72 bp ACATATTATCTCTCTTTTTGTTGTTTCTTAGCTGCGTaGTGTCCTCCAGAAATGGGTTTGAGGCAGACAGTT +
Preference number: 6 (lower is better)
Translates to: TYYLSFCCFLAA*CPPEMGLRQTV
Trigger: AACTGTCTGCCTCAAACCCATTTCTGGAGGACATCACGCAGCTAAGAAACAACAAAAAGAGAGATAATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp GGTTTTGTGGATATAATCCCAAATAGTAGCAGCTGGTaGATGAATGATCGTAGCTTGTACAGCTATGACTAT +
Preference number: 6 (lower is better)
Translates to: GFVDIIPNSSSW*MNDRSLYSYDY
Trigger: ATAGTCATAGCTGTACAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGGGATTATATCCACAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 90 bp AAAATGCCATCAGACATTGACATCACTTGTTCTTTAGAAATCACTTaGACATTTTTACAATGCACGAGTCCGATCTTACCTCGGAGGACT +
Preference number: 6 (lower is better)
Translates to: KMPSDIDITCSLEIT*TFLQCTSPILPRRT
Trigger: AGTCCTCCGAGGTAAGATCGGACTCGTGCATTGTAAAAATGTCAAAGTGATTTCTAAAGAACAAGTGATGTCAATGTCTGATGGCATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 90 bp TGGACTGTCCTATGGCTCTTACTGTACCTTCTCCAAGAAGGGCAATaGTGTCCCCTTTTAAATATTCAAGCAAATAGTCAATCTTATTTT +
Preference number: 6 (lower is better)
Translates to: WTVLWLLLYLLQEGQ*CPLLNIQANSQSYF
Trigger: AAAATAAGATTGACTATTTGCTTGAATATTTAAAAGGGGACACAATTGCCCTTCTTGGAGAAGGTACAGTAAGAGCCATAGGACAGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CCA 72 bp GTTGTGTCCACAAACAGTGAAAACAGCAGTAAAGCTTaGATGGAGATATTTAGGTCCATAAATTCCAATAGA +
Preference number: 6 (lower is better)
Translates to: VVSTNSENSSKA*MEIFRSINSNR
Trigger: TCTATTGGAATTTATGGACCTAAATATCTCCATCCAAGCTTTACTGCTGTTTTCACTGTTTGTGGACACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS CAA 72 bp TCAGACATTGACATCACTTGTTCTTTAGAAATCACTTaGACATTTTTACAATGCACGAGTCCGATCTTACCT +
Preference number: 6 (lower is better)
Translates to: SDIDITCSLEIT*TFLQCTSPILP
Trigger: AGGTAAGATCGGACTCGTGCATTGTAAAAATGTCAAAGTGATTTCTAAAGAACAAGTGATGTCAATGTCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2
CDS TCA 72 bp CAGAAGATTCTTGGTTGTCAAAATGCCATCAGACATTaGCATCACTTGTTCTTTAGAAATCACTTTGACATT +
Preference number: 6 (lower is better)
Translates to: QKILGCQNAIRH*HHLFFRNHFDI
Trigger: AATGTCAAAGTGATTTCTAAAGAACAAGTGATGTCAATGTCTGATGGCATTTTGACAACCAAGAATCTTCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000048880.7
ENSMUST00000221866.2
ENSMUST00000221917.2
ENSMUST00000222058.2
ENSMUST00000222784.2