Pregenerated sensors for MAB21L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057777Ensembl transcript IDs: ENSMUST00000077524.4
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACATAAAAGTTTGTGTTTCGAGTTTTTGCTGTTGTTGTGTGTTCTaGGAGAGCATGCCCATTTATGTTGCTTTCCACGCAGTCGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: YIKVCVSSFCCCCVF*ESMPIYVAFHAVGS Trigger: GCTGCCGACTGCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR GCA 90 bp | CCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTaGTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: PFFQVIYIKVCVSSF*CCCVFWESMPIYVA Trigger: AGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 90 bp | TCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGCTGTTGTaGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGC | + |
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Preference number: 2 (lower is better) Translates to: SGDLHKSLCFEFLLL*CVLGEHAHLCCFPR Trigger: GCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 90 bp | CCCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTaGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGC | + |
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Preference number: 2 (lower is better) Translates to: PVLSGDLHKSLCFEF*LLLCVLGEHAHLCC Trigger: GCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 90 bp | TGTCTTCTGCCTACTCCCGTTCTTTCAGGTGATTTACATAAAAGTTaGTGTTTCGAGTTTTTGCTGTTGTTGTGTGTTCTGGGAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CLLPTPVLSGDLHKS*CFEFLLLLCVLGEH Trigger: ATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGGAGTAGGCAGAAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGCGATCTTTAAATGTGTTTCGAGTTTTTaGTGTTGTTGTGTGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GFHFVFAKPDCFFCAIFKCVSSF*CCCVFW Trigger: CCAGAACACACAACAACAGCAAAAACTCGAAACACA...TTTAAAGATCGCACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 90 bp | CTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGCTGTaGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSGDLHKSLCFEFLL*LCVLGEHAHLCCFP Trigger: TGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR-3UTR GCA 90 bp | CGGATTGCTTCTTTTGTGCGATCTTTAAATTCACATTGTTTGGAAGGAAACGATTTGCCCTCTTTTGTTTaGTTCTTAATTAGGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: RIASFVRSLNSHCLEGNDLPSFV*FLIRMS Trigger: AGACATCCTAATTAAGAAGCAAACAAAAGAGGGCAA...ATCGTTTCCTTCCAAACAATGTGAATTTAAAGATCGCACAAAAGAAGCAATCCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR GCA 72 bp | CGAGTTTTTGCTGTTGTTGTGTGTTCTGGGAGAGCATaGCCATTTATGTTGCTTTCCACGCAGTCGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: RVFAVVVCSGRA*PFMLLSTQSAA Trigger: TGCTGCCGACTGCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CCA 72 bp | GTTTGTGTTTCGAGTTTTTGCTGTTGTTGTGTGTTCTaGGAGAGCATGCCCATTTATGTTGCTTTCCACGCA | + |
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Preference number: 3 (lower is better) Translates to: VCVSSFCCCCVF*ESMPIYVAFHA Trigger: TGCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTGTTTGCTTCTTAATTAGGATGTCTTCTGCCTACTCCCGTTCTTTCAGGTTCGAGTTTTTGCTGTaGTTGTGTGTTCTGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SFVCFLIRMSSAYSRSFRFEFLL*LCVLGE Trigger: CTCTCCCAGAACACACAACAACAGCAAAAACTCGAA...CCTGAAAGAACGGGAGTAGGCAGAAGACATCCTAATTAAGAAGCAAACAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR GCA 72 bp | AAGTTCACATCTTGTAAGTTAGAAAGTGATCTCATCTaGCTTCATTCAAGAACAATCCGCAAGCAGCCAATT | + |
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Preference number: 3 (lower is better) Translates to: KFTSCKLESDLI*LHSRTIRKQPI Trigger: AATTGGCTGCTTGCGGATTGTTCTTGAATGAAGGCAGATGAGATCACTTTCTAACTTACAAGATGTGAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | TTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGCCTCTCCAGGGCCGAGTaGGGCTTACCCTGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLLCVLGEHAHLCCFPRLSRAE*GLPWKR Trigger: CCTCTTCCAGGGTAAGCCCCACTCGGCCCTGGAGAG...GCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | TTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGCGCCAATCTCCAGGTCTaGTTGGCAGCGCTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLLCVLGEHAHLCCFPRANLQV*LAALSR Trigger: CCTGGAGAGCGCTGCCAAGCAGACCTGGAGATTGGC...GCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | TTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGCCTTCTCGGATGGTCTTaGCGATCGCAGCCTTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LLLLCVLGEHAHLCCFPRLLGWS*RSQPCA Trigger: CGCGCAAGGCTGCGATCGCCAAGACCATCCGAGAAG...GCGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | TTTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGCGACCCAAAGAGACATaGTCCGCTTCCGCCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: FAVVVCSGRACPFMLLSTRPKET*SASAHR Trigger: GCGATGGGCGGAAGCGGAGCATGTCTCTTTGGGTCG...CGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | CCTACTCCCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGGCCACTGTGCCGCGCTaGGAGGCCAGATCCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PTPVLSGDLHKSLCFEFLATVPR*EARSRC Trigger: GCACCGGGATCTGGCCTCGCAGCGCGGCACAGTGGC...CAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGGAGTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | TCTTTTGTTTGCTTCTTAATTAGGATGTCTTCTGCCTACTCCCGTTCTTTCAGGGGGCATAGGCCACTGTaGCGCGCTGCGAGGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SFVCFLIRMSSAYSRSFRGHRPL*RAARPD Trigger: ATCTGGCCTCGCAGCGCGGCACAGTGGCCTATGCCC...CCTGAAAGAACGGGAGTAGGCAGAAGACATCCTAATTAAGAAGCAAACAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | TTTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGCTGCGGAGCTCTGCTTaGCAGTCAGCGAGTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: FAVVVCSGRACPFMLLSTLRSSA*QSASST Trigger: AGTGCTACTCGCTGACTGGCAAGCAGAGCTCCGCAG...CGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | GGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGCGATCTTTAAAGGGCAGCGGCGGCACTaGAGGCAGGAGATGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GFHFVFAKPDCFFCAIFKGQRRH*RQEMSC Trigger: ACAGCTCATCTCCTGCCTGCAGTGCCGCCGCTGCCC...TTTAAAGATCGCACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR TCA 90 bp | TTTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGAGACTCCCATCTGGTTaGGGTAGAGTACCACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: FAVVVCSGRACPFMLLSTRLPSG*GRVPPR Trigger: TCGAGGTGGTACTCTACCTCAACCAGATGGGAGTCT...CGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | AAATGTACCTTGGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGGAGTGGGGCTTACCCTaGAAGAGGTCGAGGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KCTLGFILCSQSRIASFVEWGLP*KRSRLG Trigger: GCCCAACCTCGACCTCTTCCAGGGTAAGCCCCACTC...CACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCCAAGGTACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | AATAATTATTTTCACTTGGTGACAATCACGCAAGCAACCCAAAACAAGGAGGGGAACGCGAGCGGATCTTaGGCGCAGAAAGGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NNYFHLVTITQATQNKEGNASGS*AQKGSQ Trigger: CTGGCTACCTTTCTGCGCGCAAGATCCGCTCGCGTT...CCCCTCCTTGTTTTGGGTTGCTTGCGTGATTGTCACCAAGTGAAAATAATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | CGAGTTTTTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTGGGCTACTAGTGTCTaGAAACGCGAGCGGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: RVFAVVVCSGRACPFMLLWATSV*KRERIL Trigger: CAAGATCCGCTCGCGTTTCCAGACACTAGTAGCCCA...AAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR TCA 90 bp | GGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGCGATCTTTAAATCATGTGGTAGTTATTaGGCGGCTGGCCAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GFHFVFAKPDCFFCAIFKSCGSY*AAGQAA Trigger: AGCTGCCTGGCCAGCCGCTCAATAACTACCACATGA...TTTAAAGATCGCACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | TCTTTTGTTTGCTTCTTAATTAGGATGTCTTCTGCCTACTCCCGTTCTTTCAGGATGAAGCGGGGCTCTTaGACCTCCACTTCCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: SFVCFLIRMSSAYSRSFRMKRGS*TSTSFS Trigger: GCTAAAGGAAGTGGAGGTGCAAGAGCCCCGCTTCAT...CCTGAAAGAACGGGAGTAGGCAGAAGACATCCTAATTAAGAAGCAAACAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | GGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGCGATCTTTAAACACTTGTCCACCGCCTaGGCTACTAGTGTCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GFHFVFAKPDCFFCAIFKHLSTA*ATSVWK Trigger: TTTCCAGACACTAGTAGCCCAGGCGGTGGACAAGTG...TTTAAAGATCGCACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | TCTTTTGTTTGCTTCTTAATTAGGATGTCTTCTGCCTACTCCCGTTCTTTCAGGGGAAGAGGTCGAGGTTaGGCAAAAAGTAGTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SFVCFLIRMSSAYSRSFRGRGRG*AKSSEG Trigger: GCCCTCACTACTTTTTGCCCAACCTCGACCTCTTCC...CCTGAAAGAACGGGAGTAGGCAGAAGACATCCTAATTAAGAAGCAAACAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR TCA 90 bp | GGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGCGATCTTTAAAAGCTTTTGGGATTGGTaGGGATTTCCCTGGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: GFHFVFAKPDCFFCAIFKSFWDW*GFPWPI Trigger: GATTGGCCAGGGAAATCCTCACCAATCCCAAAAGCT...TTTAAAGATCGCACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR GCA 90 bp | AATAATTATTTTCACTTGGTGACAATCACGCAAGCAACCCAAAACAAGGAGGGGCATCCGACACTACCTTaGAGACTTCTCGGATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NNYFHLVTITQATQNKEGHPTLP*RLLGWS Trigger: AGACCATCCGAGAAGTCTGCAAGGTAGTGTCGGATG...CCCCTCCTTGTTTTGGGTTGCTTGCGTGATTGTCACCAAGTGAAAATAATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CCA 90 bp | CGGATTGCTTCTTTTGTGCGATCTTTAAATTCACATTGTTTGGAAGGAAACGATGGTGCACTTGAACGCTaGGGTGATTTGCACCACGTA | + |
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Preference number: 4 (lower is better) Translates to: RIASFVRSLNSHCLEGNDGALER*GDLHHV Trigger: TACGTGGTGCAAATCACCCCAGCGTTCAAGTGCACC...ATCGTTTCCTTCCAAACAATGTGAATTTAAAGATCGCACAAAAGAAGCAATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 72 bp | TCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTaGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGDLHKSLCFEF*LLLCVLGEHAH Trigger: ATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 72 bp | GATTTACATAAAAGTTTGTGTTTCGAGTTTTTGCTGTaGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGT | + |
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Preference number: 4 (lower is better) Translates to: DLHKSLCFEFLL*LCVLGEHAHLC Trigger: ACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGAAACACAAACTTTTATGTAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| 3UTR CAA 72 bp | CCGGATTGCTTCTTTTGTGCGATCTTTAAATTCACATaGTTTGGAAGGAAACGATCATTTTTGTGCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PDCFFCAIFKFT*FGRKRSFLCKN Trigger: ATTCTTGCACAAAAATGATCGTTTCCTTCCAAACAATGTGAATTTAAAGATCGCACAAAAGAAGCAATCCGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS GCA 90 bp | AAGCTTTTGGGATTGGTGAGGATTTCCCTGGCCAATCTCCAGGTCTaGTTGGCAGCGCTCTCCAGGGCCGAGTGGGGCTTACCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KLLGLVRISLANLQV*LAALSRAEWGLPWK Trigger: CTTCCAGGGTAAGCCCCACTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGATTGGCCAGGGAAATCCTCACCAATCCCAAAAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | TTTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTTTCCACGAGCACCGAGAGGCACTaGTTTCTACAGCCGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: FAVVVCSGRACPFMLLSTSTERH*FLQPPI Trigger: GATGGGCGGCTGTAGAAACAAGTGCCTCTCGGTGCT...CGTGGAAAGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CCTACTCCCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGCGCCCATCGCTTAGTTaGAGCACGGCACAGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: PTPVLSGDLHKSLCFEFLRPSLS*STAQPG Trigger: GCCCGGCTGTGCCGTGCTCAAACTAAGCGATGGGCG...CAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGGAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | TCGAGTTTTTGCTGTTGTTGTGTGTTCTGGGAGAGCATGCCCATTTATGTTGCTACATCCGACACTACCTaGCAGACTTCTCGGATGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSFCCCCVFWESMPIYVATSDTT*QTSRMV Trigger: GACCATCCGAGAAGTCTGCAAGGTAGTGTCGGATGT...AGCAACATAAATGGGCATGCTCTCCCAGAACACACAACAACAGCAAAAACTCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | AAATGTACCTTGGGTTTCATTTTGTGTTCGCAAAGCCGGATTGCTTCTTTTGTGTCCCTGATGCGCAACTaGACCTCACTAGTGTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: KCTLGFILCSQSRIASFVSLMRN*TSLVSA Trigger: CGCCGACACTAGTGAGGTCAAGTTGCGCATCAGGGA...CACAAAAGAAGCAATCCGGCTTTGCGAACACAAAATGAAACCCAAGGTACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | TCTTTTGTTTGCTTCTTAATTAGGATGTCTTCTGCCTACTCCCGTTCTTTCAGGCAGATCCCGGTGCACTaGAACGCTGGGGTGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: SFVCFLIRMSSAYSRSFRQIPVH*NAGVIC Trigger: GCAAATCACCCCAGCGTTCAAGTGCACCGGGATCTG...CCTGAAAGAACGGGAGTAGGCAGAAGACATCCTAATTAAGAAGCAAACAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CCTACTCCCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGAATCTCCAGGTCTGCTaGGCAGCGCTCTCCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PTPVLSGDLHKSLCFEFLNLQVC*AALSRA Trigger: GGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGATT...CAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGGAGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CCTACTCCCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGACTTCTCGGATGGTCTaGGCGATCGCAGCCTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: PTPVLSGDLHKSLCFEFLTSRMV*AIAALR Trigger: GCGCAAGGCTGCGATCGCCAAGACCATCCGAGAAGT...CAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGGAGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CGGATTGCTTCTTTTGTGCGATCTTTAAATTCACATTGTTTGGAAGGAAACGATGAACGCTGGGGTGATTaGCACCACGTAGCGCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: RIASFVRSLNSHCLEGNDERWGD*HHVALP Trigger: AGGGAGCGCTACGTGGTGCAAATCACCCCAGCGTTC...ATCGTTTCCTTCCAAACAATGTGAATTTAAAGATCGCACAAAAGAAGCAATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CGGATTGCTTCTTTTGTGCGATCTTTAAATTCACATTGTTTGGAAGGAAACGATTCCTTGGAGAGCAAGTaGAACCCTTCGGCCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: RIASFVRSLNSHCLEGNDSLESK*NPSALT Trigger: GGTCAAGGCCGAAGGGTTCAACTTGCTCTCCAAGGA...ATCGTTTCCTTCCAAACAATGTGAATTTAAAGATCGCACAAAAGAAGCAATCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CGGATTGCTTCTTTTGTGCGATCTTTAAATTCACATTGTTTGGAAGGAAACGATTCCAAGCTTTTGGGATaGGTGAGGATTTCCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: RIASFVRSLNSHCLEGNDSKLLG*VRISLA Trigger: GGCCAGGGAAATCCTCACCAATCCCAAAAGCTTGGA...ATCGTTTCCTTCCAAACAATGTGAATTTAAAGATCGCACAAAAGAAGCAATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS-3UTR CAA 90 bp | CCTACTCCCGTTCTTTCAGGTGATTTACATAAAAGTTTGTGTTTCGAGTTTTTGAGTTTGTCCAAGCTTTaGGGATTGGTGAGGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: PTPVLSGDLHKSLCFEFLSLSKL*GLVRIS Trigger: GGAAATCCTCACCAATCCCAAAAGCTTGGACAAACT...CAAAAACTCGAAACACAAACTTTTATGTAAATCACCTGAAAGAACGGGAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS CAA 90 bp | AGCTCCAGGTGGCGGTCCCGCAGCGTCTTCAGCACCGAGAGGCACTaGTTTCTACAGCCGCCCATCAGCAAGCGGTTCTCCGCCTCACCG | + |
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Preference number: 6 (lower is better) Translates to: SSRWRSRSVFSTERH*FLQPPISKRFSASP Trigger: CGGTGAGGCGGAGAACCGCTTGCTGATGGGCGGCTGTAGAAACAAGTGCCTCTCGGTGCTGAAGACGCTGCGGGACCGCCACCTGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS CCA 72 bp | GGGCCGAGTGGGGCTTACCCTGGAAGAGGTCGAGGTTaGGCAAAAAGTAGTGAGGGCAGCGGCGGCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: GPSGAYPGRGRG*AKSSEGSGGTA Trigger: TGCAGTGCCGCCGCTGCCCTCACTACTTTTTGCCCAACCTCGACCTCTTCCAGGGTAAGCCCCACTCGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS CCA 72 bp | CTCCAGGTCTGCTTGGCAGCGCTCTCCAGGGCCGAGTaGGGCTTACCCTGGAAGAGGTCGAGGTTGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LQVCLAALSRAE*GLPWKRSRLGK Trigger: TTTGCCCAACCTCGACCTCTTCCAGGGTAAGCCCCACTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS CAA 72 bp | TGGCGGTCCCGCAGCGTCTTCAGCACCGAGAGGCACTaGTTTCTACAGCCGCCCATCAGCAAGCGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: WRSRSVFSTERH*FLQPPISKRFS Trigger: GGAGAACCGCTTGCTGATGGGCGGCTGTAGAAACAAGTGCCTCTCGGTGCTGAAGACGCTGCGGGACCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS CAA 72 bp | TTGGTGAGGATTTCCCTGGCCAATCTCCAGGTCTGCTaGGCAGCGCTCTCCAGGGCCGAGTGGGGCTTACCC | + |
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Preference number: 6 (lower is better) Translates to: LVRISLANLQVC*AALSRAEWGLP Trigger: GGGTAAGCCCCACTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGATTGGCCAGGGAAATCCTCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS TCA 72 bp | ACTCGTACAGCAGCAGCGTCTTCATGTGGTAGTTATTaGGCGGCTGGCCAGGCAGCTCCAGGTGGCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: TRTAAASSCGSY*AAGQAAPGGGP Trigger: GGGACCGCCACCTGGAGCTGCCTGGCCAGCCGCTCAATAACTACCACATGAAGACGCTGCTGCTGTACGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS GCA 72 bp | GGATTGGTGAGGATTTCCCTGGCCAATCTCCAGGTCTaGTTGGCAGCGCTCTCCAGGGCCGAGTGGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: GLVRISLANLQV*LAALSRAEWGL Trigger: TAAGCCCCACTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGATTGGCCAGGGAAATCCTCACCAATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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| CDS CAA 90 bp | CTTTTGGGATTGGTGAGGATTTCCCTGGCCAATCTCCAGGTCTGCTaGGCAGCGCTCTCCAGGGCCGAGTGGGGCTTACCCTGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LLGLVRISLANLQVC*AALSRAEWGLPWKR Trigger: CCTCTTCCAGGGTAAGCCCCACTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGATTGGCCAGGGAAATCCTCACCAATCCCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077524.4 |
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