Pregenerated sensors for MAB21L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056947Ensembl transcript IDs: ENSMUST00000075422.6
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTaGTGGAGTTGGCCATGGTCTTGCATTGCAGCCAGCTGTTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: AGRQPHLSLKITIIL*WSWPWSCIAASCFG Trigger: CCCAAAACAGCTGGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CCA 90 bp | CAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGAGTTaGCCATGGTCTTGCATTGCAGCCAGCTGTTTTGGGGTGTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: QPHLSLKITIILCWS*PWSCIAASCFGVLC Trigger: GCACAACACCCCAAAACAGCTGGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CCA 90 bp | ATACATTACACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTGCTaGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: IHYTLLPMVHPGPVC*KAAAPKSQDYYNPL Trigger: CAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR GCA 90 bp | AATATACATTACACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTaGTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCT | + |
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Preference number: 1 (lower is better) Translates to: NIHYTLLPMVHPGPV*WKAAAPKSQDYYNP Trigger: AGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR GCA 90 bp | ATGAGATCACAACTTTTGTTACAGATCAAAATATACATTACACTTTaGTTCCGATGGTACATCCGGGCCCTGTTTGCTGGAAGGCAGCCG | + |
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Preference number: 1 (lower is better) Translates to: MRSQLLLQIKIYITL*FRWYIRALFAGRQP Trigger: CGGCTGCCTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTATATTTTGATCTGTAACAAAAGTTGTGATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR GCA 90 bp | ATCACCAAATCACAAAACACCAATATCCACACTTTCAAAGACAACATGAGATCACATCCGGGCCCTGTTTaGTGGAAGGCAGCCGCACCT | + |
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Preference number: 2 (lower is better) Translates to: ITKSQNTNIHTFKDNMRSHPGPV*WKAAAP Trigger: AGGTGCGGCTGCCTTCCAGCAAACAGGGCCCGGATG...TGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTTTTGTGATTTGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR CCA 90 bp | CACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTGCTGCAGCCAGCTGTTTTaGGGTGTTGTGCACTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: HLSLKITIILCWSWPWSCCSQLF*GVVHFS Trigger: CGAAAAGTGCACAACACCCCAAAACAGCTGGCTGCA...GCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCAAGATGCTTGTGGTGTaGTTTTTCCCCTGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LFAGRQPHLSLKITIILCKMLVV*FFPCVR Trigger: TCTCACACAGGGGAAAAACCACACCACAAGCATCTT...GCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CAA 90 bp | CATGAGATCACAACTTTTGTTACAGATCAAAATATACATTACACTTaGCTTCCGATGGTACATCCGGGCCCTGTTTGCTGGAAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: HEITTFVTDQNIHYT*LPMVHPGPVCWKAA Trigger: GGCTGCCTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTATATTTTGATCTGTAACAAAAGTTGTGATCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTGCATTGCAGCCTTCCCCTGTGTGAGATaGTGGTTAAATGTTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LKITIILCWSWPWSCIAAFPCVR*WLNVVL Trigger: CAACACAACATTTAACCATCATCTCACACAGGGGAA...GGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGTTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTAAGGAAGAGATTGTTTaGACTGTCTCGAGAAATAGT | + |
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Preference number: 2 (lower is better) Translates to: ALFAGRQPHLSLKITIILKEEIV*TVSRNS Trigger: ACTATTTCTCGAGACAGTGCAAACAATCTCTTCCTT...AAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CAA 90 bp | ATAGTACATAGGAATCAACCAGGAAGTTTTCATTTCGTCGGGACTTaGAGAAGAATGCTCATTCTTGTCAGCCCTGGATTAGATCATCCT | + |
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Preference number: 2 (lower is better) Translates to: IVHRNQPGSFHFVGT*RRMLILVSPGLDHP Trigger: AGGATGATCTAATCCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTTCCTGGTTGATTCCTATGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGTACCAGGAGGAAATCTACCTTTAAATGCATCTCTGTTCTGTGGGAAATGTACTATAATCCTTTGCTaGAGTTGGCCATGGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: KVPGGNLPLNASLFCGKCTIILC*SWPWSC Trigger: GCAAGACCATGGCCAACTCCAGCAAAGGATTATAGT...ACATTTCCCACAGAACAGAGATGCATTTAAAGGTAGATTTCCTCCTGGTACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR GCA 72 bp | TACACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTaGTGGAAGGCAGCCGCACCTAAGTCTCAAGATTAC | + |
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Preference number: 3 (lower is better) Translates to: YTLLPMVHPGPV*WKAAAPKSQDY Trigger: GTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CCA 72 bp | ACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTGCTaGAAGGCAGCCGCACCTAAGTCTCAAGATTACTAT | + |
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Preference number: 3 (lower is better) Translates to: TLLPMVHPGPVC*KAAAPKSQDYY Trigger: ATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR GCA 72 bp | CAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTaGTGGAGTTGGCCATGGTCTTGCATTGCAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: QPHLSLKITIIL*WSWPWSCIAAS Trigger: GCTGGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR GCA 72 bp | ATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTaGATTGCAGCCAGCTGTTTTGGGGTGTTGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: ITIILCWSWPWS*IAASCFGVLCT Trigger: AGTGCACAACACCCCAAAACAGCTGGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR CAA 90 bp | CACCAAATCACAAAACACCAATATCCACACTTTCAAAGACAACATGAGATCACAGGCCATGGTCTTGCATaGCAGCCAGCTGTTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: HQITKHQYPHFQRQHEITGHGLA*QPAVLG Trigger: CCCCAAAACAGCTGGCTGCAATGCAAGACCATGGCC...TGTGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTTTTGTGATTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGCATTTCGTCGGGACTTaGAGAAGAATGCTCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: FAGRQPHLSLKITIILCWHFVGT*RRMLIL Trigger: AAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATG...CCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR-3UTR CAA 90 bp | ATCACCAAATCACAAAACACCAATATCCACACTTTCAAAGACAACATGAGATCATTGCAGCCAGCTGTTTaGGGGTGTTGTGCACTTTTC | + |
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Preference number: 3 (lower is better) Translates to: ITKSQNTNIHTFKDNMRSLQPAV*GCCALF Trigger: GAAAAGTGCACAACACCCCAAAACAGCTGGCTGCAA...TGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTTTTGTGATTTGGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | AATATACATTACACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTGCTGGAAGCCACCCAGAGGGACATaGTCCTCTTGCGCCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: NIHYTLLPMVHPGPVCWKPPRGT*SSCAHR Trigger: GCGATGGGCGCAAGAGGAGCATGTCCCTCTGGGTGG...CTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTATATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | CTGTTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCGTTCAGGGGCTGGCCTaGCAACTCCAGGTGGCGATC | + |
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Preference number: 4 (lower is better) Translates to: LFAGRQPHLSLKITIILCVQGLA*QLQVAI Trigger: GATCGCCACCTGGAGTTGCCAGGCCAGCCCCTGAAC...GCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | TTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGGGAACGGATTTTGCGTaGCGAGAGGTAGCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FAGRQPHLSLKITIILCWGTDFA*REVARG Trigger: GCCTCTGGCTACCTCTCGGCACGCAAAATCCGTTCC...CCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | CGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGATTAGATCATCCAAGGCCGGGGTGATCTaGACCACATACCTATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RRDFEKNAHSCQPWIRSSKAGVI*TTYLSR Trigger: CCGAGATAGGTATGTGGTGCAGATCACCCCGGCCTT...GGATGATCTAATCCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | TTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGTTCAGCCTTAACCTCTaGCACCCGGTTGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FAGRQPHLSLKITIILCWFSLNL*HPVGSW Trigger: CCAGGACCCAACCGGGTGGCAGAGGTTAAGGCTGAA...CCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | AAAGTACCAGGAGGAAATCTACCTTTAAATGCATCTCTGTTCTGTGGGAAATGTCCTGGCCAGGGGATGTaGGGAAGCGGCCAGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KVPGGNLPLNASLFCGKCPGQGM*GSGQWA Trigger: TGCCCACTGGCCGCTTCCCCACATCCCCTGGCCAGG...ACATTTCCCACAGAACAGAGATGCATTTAAAGGTAGATTTCCTCCTGGTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | AAAGTACCAGGAGGAAATCTACCTTTAAATGCATCTCTGTTCTGTGGGAAATGTCCTCTGCCACCCGGTTaGGTCCTGGCCAGGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: KVPGGNLPLNASLFCGKCPLPPG*VLARGC Trigger: ACATCCCCTGGCCAGGACCCAACCGGGTGGCAGAGG...ACATTTCCCACAGAACAGAGATGCATTTAAAGGTAGATTTCCTCCTGGTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR TCA 90 bp | AAGTTTTCATTTCGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGCCGGCACTGCAGGCATaGGATGAGCTGCAGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KFSFRRDFEKNAHSCQPWPALQA*DELQKN Trigger: ATTCTTCTGCAGCTCATCTCATGCCTGCAGTGCCGG...CCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | CAAGATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTGCATTGCAGCCAGCGATGGCAGCTTTCCTaGCCTGGCATTTCTCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: QDYYNPLLELAMVLHCSQRWQLS*PGISRC Trigger: ACAACGAGAAATGCCAGGCCAGGAAAGCTGCCATCG...CTGGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | TTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGCCAGTGTCTGAAACCTaGAACGGATTTTGCGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: FAGRQPHLSLKITIILCWPVSET*NGFCVP Trigger: CGGCACGCAAAATCCGTTCCAGGTTTCAGACACTGG...CCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CAA 72 bp | GATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTaGCATTGCAGCCAGCTGTTTTGGGGTGTTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: DYYNPLLELAMV*HCSQLFWGVVH Trigger: GTGCACAACACCCCAAAACAGCTGGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR TCA 90 bp | AATATACATTACACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTGCTGGAAGACTGCAGGCATGAGATaGGCTGCAGAAGAATTCCGT | + |
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Preference number: 4 (lower is better) Translates to: NIHYTLLPMVHPGPVCWKTAGMR*AAEEFR Trigger: ACGGAATTCTTCTGCAGCTCATCTCATGCCTGCAGT...CTTCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR TCA 90 bp | GCCCTGTTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTGAGTGGGGTTTGCCTTaGAACAGATCTAAGTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: ALFAGRQPHLSLKITIILEWGLP*NRSKFG Trigger: ACCGAACTTAGATCTGTTTCAAGGCAAACCCCACTC...AAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | CACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTGCCGTCGGAGACCACTTTaGAGACTTCCCGGATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: HLSLKITIILCWSWPWSCRRRPL*RLPGWF Trigger: AAACCATCCGGGAAGTCTGCAAAGTGGTCTCCGACG...GCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | CAACCAGGAAGTTTTCATTTCGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCACCTGGAACGGATTTTaGGTGCCGAGAGGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QPGSFHFVGTLRRMLILVTWNGF*VPRGSQ Trigger: CTGGCTACCTCTCGGCACGCAAAATCCGTTCCAGGT...GACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTTCCTGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | CGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGATTAGATCATCCAGGCCGAGTGGGGTTTaGCTTGAAACAGATCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: RRDFEKNAHSCQPWIRSSRPSGV*LETDLS Trigger: ACTTAGATCTGTTTCAAGGCAAACCCCACTCGGCCT...GGATGATCTAATCCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | AACACCAATATCCACACTTTCAAAGACAACATGAGATCACAACTTTTGTTACAGCAGCCGAACTCTGCTTaGCGGCCAGGGAGTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: NTNIHTFKDNMRSQLLLQQPNSA*RPGSGT Trigger: AGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTG...CTGTAACAAAAGTTGTGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | ACCTTTAAATGCATCTCTGTTCTGTGGGAAATGTCTGAAAGTTTCCAAAATGGTTCGGCCTCTGCAAACTaGAGCACCCAAGCATCGCTC | + |
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Preference number: 4 (lower is better) Translates to: TFKCISVLWEMSESFQNGSASAN*STQASL Trigger: GAGCGATGCTTGGGTGCTGCAGTTTGCAGAGGCCGA...ACCATTTTGGAAACTTTCAGACATTTCCCACAGAACAGAGATGCATTTAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | ACCTTTAAATGCATCTCTGTTCTGTGGGAAATGTCTGAAAGTTTCCAAAATGGTTCTGTTCTCGGCCTCTaGAAACTGCAGCACCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TFKCISVLWEMSESFQNGSVLGL*KLQHPS Trigger: GCTTGGGTGCTGCAGTTTGCAGAGGCCGAGAACAGA...ACCATTTTGGAAACTTTCAGACATTTCCCACAGAACAGAGATGCATTTAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| 3UTR CAA 72 bp | AGGAATCAACCAGGAAGTTTTCATTTCGTCGGGACTTaGAGAAGAATGCTCATTCTTGTCAGCCCTGGATTA | + |
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Preference number: 4 (lower is better) Translates to: RNQPGSFHFVGT*RRMLILVSPGL Trigger: TAATCCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTTCCTGGTTGATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | CTCAAGATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTGCATTGCAGCCTTTTTCCAAACTTTTTaGGTTGGTCAGGATCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LKITIILCWSWPWSCIAAFFQTF*VGQDLS Trigger: AGAGAGATCCTGACCAACCCAAAAAGTTTGGAAAAA...GGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | ATCACCAAATCACAAAACACCAATATCCACACTTTCAAAGACAACATGAGATCAGGTCAGGATCTCTCTTaGCAGTCGCCACGTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: ITKSQNTNIHTFKDNMRSGQDLS*QSPRLF Trigger: AAACAAACGTGGCGACTGGCAAGAGAGATCCTGACC...TGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTTTTGTGATTTGGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR GCA 90 bp | AACACCAATATCCACACTTTCAAAGACAACATGAGATCACAACTTTTGTTACAGAGGCATGAGATGAGCTaGAGAAGAATTCCGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NTNIHTFKDNMRSQLLLQRHEMS*RRIPFS Trigger: GCTGAACGGAATTCTTCTGCAGCTCATCTCATGCCT...CTGTAACAAAAGTTGTGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CCA 90 bp | ATCACCAAATCACAAAACACCAATATCCACACTTTCAAAGACAACATGAGATCACCAAACTTTTTGGGTTaGTCAGGATCTCTCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ITKSQNTNIHTFKDNMRSPNFLG*SGSLLP Trigger: TGGCAAGAGAGATCCTGACCAACCCAAAAAGTTTGG...TGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTTTTGTGATTTGGTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS GCA 90 bp | CACCGCCTGAGCCACCAGTGTCTGAAACCTGGAACGGATTTTGCGTaGCGAGAGGTAGCCAGAGGCGGTGATGAATTCCACCCAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: HRLSHQCLKPGTDFA*REVARGGDEFHPEG Trigger: TCCCTCTGGGTGGAATTCATCACCGCCTCTGGCTACCTCTCGGCACGCAAAATCCGTTCCAGGTTTCAGACACTGGTGGCTCAGGCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS GCA 90 bp | GCCTCTGCAAACTGCAGCACCCAAGCATCGCTCTCAGCCGAACTCTaGTTGCCGGCCAGGGAGTGGCACTCCTTGGACAACAAATTGAAC | + |
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Preference number: 5 (lower is better) Translates to: ASANCSTQASLSAEL*LPAREWHSLDNKLN Trigger: GTTCAATTTGTTGTCCAAGGAGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTGAGAGCGATGCTTGGGTGCTGCAGTTTGCAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | AAGTTTTCATTTCGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGACCTCTGCCACCCGGTaGGGTCCTGGCCAGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: KFSFRRDFEKNAHSCQPWTSATR*GPGQGM Trigger: CATCCCCTGGCCAGGACCCAACCGGGTGGCAGAGGT...CCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | GCCCTGTTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTACGTCGGAGACCACTTaGCAGACTTCCCGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: ALFAGRQPHLSLKITIILTSETT*QTSRMV Trigger: AACCATCCGGGAAGTCTGCAAAGTGGTCTCCGACGT...AAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAACAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | AAAATATACATTACACTTTGCTTCCGATGGTACATCCGGGCCCTGTTTGCTGGAACTTCCCGGATGGTTTaGGCGATGGCAGCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KIYITLCFRWYIRALFAGTSRMV*AMAAFL Trigger: CAGGAAAGCTGCCATCGCCAAAACCATCCGGGAAGT...TCCAGCAAACAGGGCCCGGATGTACCATCGGAAGCAAAGTGTAATGTATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | CGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGATTAGATCATCCTGCCAGTCGCCACGTTaGTTTAGCAGCGTTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RRDFEKNAHSCQPWIRSSCQSPR*FSSVFQ Trigger: TTGGAAAACGCTGCTAAACAAACGTGGCGACTGGCA...GGATGATCTAATCCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | AAGTTTTCATTTCGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGCGGTTGTCCATCTCATaGAGGGAGCTGATGAAACGC | + |
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Preference number: 5 (lower is better) Translates to: KFSFRRDFEKNAHSCQPWRLSIS*RELMKR Trigger: GCGTTTCATCAGCTCCCTCAATGAGATGGACAACCG...CCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | TTTGCTGGAAGGCAGCCGCACCTAAGTCTCAAGATTACTATAATCCTTTGCTGGAGGGAGTGGCACTCCTaGGACAACAAATTGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: FAGRQPHLSLKITIILCWREWHS*DNKLNP Trigger: AGGGTTCAATTTGTTGTCCAAGGAGTGCCACTCCCT...CCAGCAAAGGATTATAGTAATCTTGAGACTTAGGTGCGGCTGCCTTCCAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | AAGTTTTCATTTCGTCGGGACTTTGAGAAGAATGCTCATTCTTGTCAGCCCTGGTGGTCAGGATCTCTCTaGCCAGTCGCCACGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: KFSFRRDFEKNAHSCQPWWSGSL*PVATFV Trigger: AACAAACGTGGCGACTGGCAAGAGAGATCCTGACCA...CCAGGGCTGACAAGAATGAGCATTCTTCTCAAAGTCCCGACGAAATGAAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | CTCAAGATTACTATAATCCTTTGCTGGAGTTGGCCATGGTCTTGCATTGCAGCCGTTTTTCCAAACTTTTaGGGTTGGTCAGGATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LKITIILCWSWPWSCIAAVFPNF*GWSGSL Trigger: GAGAGATCCTGACCAACCCAAAAAGTTTGGAAAAAC...GGCTGCAATGCAAGACCATGGCCAACTCCAGCAAAGGATTATAGTAATCTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS-3UTR CAA 90 bp | CACCAAATCACAAAACACCAATATCCACACTTTCAAAGACAACATGAGATCACATCCTTGGACAACAAATaGAACCCTTCAGCCTTAACC | + |
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Preference number: 5 (lower is better) Translates to: HQITKHQYPHFQRQHEITSLDNK*NPSALT Trigger: GGTTAAGGCTGAAGGGTTCAATTTGTTGTCCAAGGA...TGTGATCTCATGTTGTCTTTGAAAGTGTGGATATTGGTGTTTTGTGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS GCA 72 bp | AACTGCAGCACCCAAGCATCGCTCTCAGCCGAACTCTaGTTGCCGGCCAGGGAGTGGCACTCCTTGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: NCSTQASLSAEL*LPAREWHSLDN Trigger: GTTGTCCAAGGAGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTGAGAGCGATGCTTGGGTGCTGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS GCA 72 bp | GCAGCACCCAAGCATCGCTCTCAGCCGAACTCTGCTTaGCGGCCAGGGAGTGGCACTCCTTGGACAACAAAT | + |
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Preference number: 6 (lower is better) Translates to: AAPKHRSQPNSA*RPGSGTPWTTN Trigger: ATTTGTTGTCCAAGGAGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTGAGAGCGATGCTTGGGTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS CAA 72 bp | TGCAGCACCCAAGCATCGCTCTCAGCCGAACTCTGCTaGCCGGCCAGGGAGTGGCACTCCTTGGACAACAAA | + |
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Preference number: 6 (lower is better) Translates to: CSTQASLSAELC*PAREWHSLDNK Trigger: TTTGTTGTCCAAGGAGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTGAGAGCGATGCTTGGGTGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS CAA 90 bp | TCTGCAAACTGCAGCACCCAAGCATCGCTCTCAGCCGAACTCTGCTaGCCGGCCAGGGAGTGGCACTCCTTGGACAACAAATTGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: SANCSTQASLSAELC*PAREWHSLDNKLNP Trigger: AGGGTTCAATTTGTTGTCCAAGGAGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTGAGAGCGATGCTTGGGTGCTGCAGTTTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS CAA 72 bp | ACGTCGGAGACCACTTTGCAGACTTCCCGGATGGTTTaGGCGATGGCAGCTTTCCTGGCCTGGCATTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: TSETTLQTSRMV*AMAAFLAWHFS Trigger: CGAGAAATGCCAGGCCAGGAAAGCTGCCATCGCCAAAACCATCCGGGAAGTCTGCAAAGTGGTCTCCGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS CAA 72 bp | TTGCCGGCCAGGGAGTGGCACTCCTTGGACAACAAATaGAACCCTTCAGCCTTAACCTCTGCCACCCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LPAREWHSLDNK*NPSALTSATRL Trigger: CAACCGGGTGGCAGAGGTTAAGGCTGAAGGGTTCAATTTGTTGTCCAAGGAGTGCCACTCCCTGGCCGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS GCA 72 bp | AGCCACCAGTGTCTGAAACCTGGAACGGATTTTGCGTaGCGAGAGGTAGCCAGAGGCGGTGATGAATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SHQCLKPGTDFA*REVARGGDEFH Trigger: GTGGAATTCATCACCGCCTCTGGCTACCTCTCGGCACGCAAAATCCGTTCCAGGTTTCAGACACTGGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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| CDS CAA 72 bp | TGGGTTGGTCAGGATCTCTCTTGCCAGTCGCCACGTTaGTTTAGCAGCGTTTTCCAAGGCCGAGTGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: WVGQDLSCQSPR*FSSVFQGRVGF Trigger: AAACCCCACTCGGCCTTGGAAAACGCTGCTAAACAAACGTGGCGACTGGCAAGAGAGATCCTGACCAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075422.6 |
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