Pregenerated sensors for M1AP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030041Ensembl transcript IDs: ENSMUST00000113980.4, ENSMUST00000204891.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTaGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: EEELFLSRSSFTGTG*EQADLPPDSHRVSA Trigger: TGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR TCA 90 bp | AGGAGGCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATaGTCCAAGAGAGAGTCCCTGCTGCTCAAAAGACAGGCCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: RRLTGHLIMCVNTIK*SKRESLLLKRQAWG Trigger: CCCCCAGGCCTGTCTTTTGAGCAGCAGGGACTCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGCCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204891.2 |
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| 3UTR TCA 90 bp | AAAACCTCCTCTTTATTCTTGAGTTGTAGTTTCCCAAGGGTGACTTaGCCTCACCCACCTTCTTACACAGAGCTGCAGGAAGAAATTCTG | + |
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Preference number: 1 (lower is better) Translates to: KTSSLFLSCSFPRVT*PHPPSYTELQEEIL Trigger: CAGAATTTCTTCCTGCAGCTCTGTGTAAGAAGGTGGGTGAGGTCAAGTCACCCTTGGGAAACTACAACTCAAGAATAAAGAGGAGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204891.2 |
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| 3UTR TCA 90 bp | TTCTTACACAGAGCTGCAGGAAGAAATTCTGGCCCAGGAATGCTCTaGACAATGAAGGAGGCTTACTGGGCATTTAATTATGTGTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: FLHRAAGRNSGPGML*TMKEAYWAFNYVCK Trigger: TTTACACACATAATTAAATGCCCAGTAAGCCTCCTTCATTGTTCAGAGCATTCCTGGGCCAGAATTTCTTCCTGCAGCTCTGTGTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204891.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCCCCATCGGGTGAGTGCATaGCTGTGTGCTGGCACCGGG | + |
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Preference number: 2 (lower is better) Translates to: FLSRSSFTGTGWEQADLPHRVSA*LCAGTG Trigger: CCCGGTGCCAGCACACAGCCATGCACTCACCCGATG...GGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGCATCGGGTGAGTGCATaGCTGTGTGCTGGCACCGGG | + |
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Preference number: 2 (lower is better) Translates to: QRQKRKSCFLAGAHLQAQHRVSA*LCAGTG Trigger: CCCGGTGCCAGCACACAGCCATGCACTCACCCGATG...CTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGACAGCCATCGGGTaGGTGCATGGCTGTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: EEEELFLSRSSFTGTGWEQTAIG*VHGCVL Trigger: CAGCACACAGCCATGCACTCACCCGATGGCTGTCTG...CTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAGGGAGCAGGCAGATCTaGCCCCAGACAGCCATCGGG | + |
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Preference number: 2 (lower is better) Translates to: AYWAFNYVCKHYQMIQERGSRQI*PQTAIG Trigger: CCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCC...TCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR-3UTR GCA 90 bp | GCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAGTCCCTGCTCAGCCATCGGGTGAGTaGATGGCTGTGTGCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: AFNYVCKHYQMIQERVPAQPSGE*MAVCWH Trigger: GTGCCAGCACACAGCCATGCACTCACCCGATGGCTG...AGCAGGGACTCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR CCA 72 bp | CTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTaGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGG | + |
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Preference number: 3 (lower is better) Translates to: LFLSRSSFTGTG*EQADLPPDSHR Trigger: CCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR CCA 72 bp | CCTGGGGGTGTTGCTTTCAGGGTCTCCCTTCCCCATTaGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: PGGVAFRVSLPH*AASEEEELFLS Trigger: GCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGGGAAGGGAGACCCTGAAAGCAACACCCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAACAGGCCTGGGGGTGTaGCTTTCAGGGTCTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: AYWAFNYVCKHYQMIQERTGLGV*LSGSPF Trigger: GAAGGGAGACCCTGAAAGCAACACCCCCAGGCCTGT...TCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| 3UTR TCA 72 bp | TCTTTATTCTTGAGTTGTAGTTTCCCAAGGGTGACTTaGCCTCACCCACCTTCTTACACAGAGCTGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SLFLSCSFPRVT*PHPPSYTELQE Trigger: TTCCTGCAGCTCTGTGTAAGAAGGTGGGTGAGGTCAAGTCACCCTTGGGAAACTACAACTCAAGAATAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204891.2 |
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| 3UTR TCA 72 bp | AGAGCTGCAGGAAGAAATTCTGGCCCAGGAATGCTCTaGACAATGAAGGAGGCTTACTGGGCATTTAATTAT | + |
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Preference number: 3 (lower is better) Translates to: RAAGRNSGPGML*TMKEAYWAFNY Trigger: ATAATTAAATGCCCAGTAAGCCTCCTTCATTGTTCAGAGCATTCCTGGGCCAGAATTTCTTCCTGCAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204891.2 |
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| 3UTR TCA 72 bp | ACTGGGCATTTAATTATGTGTGTAAACACTATCAAATaGTCCAAGAGAGAGTCCCTGCTGCTCAAAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: TGHLIMCVNTIK*SKRESLLLKRQ Trigger: CTGTCTTTTGAGCAGCAGGGACTCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR TCA 90 bp | ACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCCTGGATGCCTTTTGTaGCCTCAGCCACCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: TGWEQADLPPDSHRVSAWPGCLL*PQPPAV Trigger: GACTGCAGGTGGCTGAGGTCACAAAAGGCATCCAGG...CCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | GAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGCCAGCAGAGGGTTGTAGGTaGGCCCCAGGTCCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ELIYRHRLGAGRSAPRQPAEGCR*APGPGC Trigger: ACAGCCTGGACCTGGGGCTCACCTACAACCCTCTGC...TGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | ACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGAGGCCTCACAGAGGTTaGGGCAGATGTCAACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TGWEQADLPPDSHRVSAWRPHRG*GRCQPR Trigger: CCTGGGTTGACATCTGCCCCAACCTCTGTGAGGCCT...CCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | TCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCTGTGTGCTGGCACCGGGGACTCTGGTTGTGTTTGTaGATCAGGGGTTCCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SAPRQPSGECMAVCWHRGLWLCL*IRGSPL Trigger: CAGAGGGGAACCCCTGATCCACAAACACAACCAGAG...TCCCCGGTGCCAGCACACAGCCATGCACTCACCCGATGGCTGTCTGGGGGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCTGTGTGCTGGCACCGGGGAGGATGCTTTGCTGGCTaGTGTCATCTTCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SAPRQPSGECMAVCWHRGGCFAG*CHLQSS Trigger: AGAGCTCTGAAGATGACAGCAGCCAGCAAAGCATCC...TCCCCGGTGCCAGCACACAGCCATGCACTCACCCGATGGCTGTCTGGGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR CCA 90 bp | CCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGACAGAGACATCCGGCTaGGGCCCATCAAACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PELIYRHRLGAGRSAPRQTETSG*GPSNCR Trigger: CCTGCAGTTTGATGGGCCCCAGCCGGATGTCTCTGT...CTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | TTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCCCGCCGTCCCTGAGGCTTaGCATGGGCGCTGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FLSRSSFTGTGWEQADLPAVPEA*HGRCSD Trigger: ATCTGAGCAGCGCCCATGCCAAGCCTCAGGGACGGC...GGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | ACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGTGGGGCCCATCAAACTaGAGGCTATCGAGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: TGWEQADLPPDSHRVSAWWGPSN*RLSRRS Trigger: ACTTCTTCTCGATAGCCTGCAGTTTGATGGGCCCCA...CCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | GGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCTGTGTGCTCTCACTTGCACAAATaGGAGGACACACTCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GAGRSAPRQPSGECMAVCSHLHK*EDTLML Trigger: CAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGA...GCACACAGCCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAAGGGAAGTCCAGGGCTaGGCAGCACTTGAGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: EELFLSRSSFTGTGWEQAREVQG*AALEAM Trigger: CATGGCCTCAAGTGCTGCTCAGCCCTGGACTTCCCT...TGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | GGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCAAGGCAGGAAGGCTGCTaGGGATGCTTTGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GQRQKRKSCFLAGAHLQARQEGC*GCFAGC Trigger: GCAGCCAGCAAAGCATCCTCAGCAGCCTTCCTGCCT...TGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR GCA 90 bp | ACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGAAGTTCCCTCTCACTTaGACAAATGGGAGGACACAC | + |
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Preference number: 4 (lower is better) Translates to: TGWEQADLPPDSHRVSAWKFPLT*TNGRTH Trigger: GTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTT...CCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | TTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCCCGCATCAACTCCCTGGTaGCCACCAGCTTCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLSRSSFTGTGWEQADLPASTPW*PPASPA Trigger: TGCTGGTGAAGCTGGTGGCCACCAGGGAGTTGATGC...GGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | TTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCCCGCAGCATCAACTCCCTaGTGGCCACCAGCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: FLSRSSFTGTGWEQADLPAASTP*WPPASP Trigger: TGGTGAAGCTGGTGGCCACCAGGGAGTTGATGCTGC...GGGCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | CAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGAGGCAGGAAGGCTGCTaGGGATGCTTTGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QRQKRKSCFLAGAHLQAQRQEGC*GCFAGC Trigger: GCAGCCAGCAAAGCATCCTCAGCAGCCTTCCTGCCT...CTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR CCA 90 bp | GAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGTCAGGGGTTCCCCTCTaGCCAACAGCAGCCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EEEELFLSRSSFTGTGWESGVPL*PTAASL Trigger: GAGACTGGCTGCTGTTGGCCAGAGGGGAACCCCTGA...CTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | TCCCTTCCCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCAGAAGACCTCCATGCTaGCAACATCGTTGTCTAGCG | + |
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Preference number: 4 (lower is better) Translates to: SLPHWAASEEEELFLSRSRRPPC*QHRCLA Trigger: CGCTAGACAACGATGTTGTCAGCATGGAGGTCTTCT...GCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGGGAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | TCCCTTCCCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCTGGTAGAGTGTGCTaGTGTCTCCTTTGGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SLPHWAASEEEELFLSRSSGRVC*CLLWGH Trigger: ATGACCCCAAAGGAGACATCAGCACACTCTACCAGA...GCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGGGAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | ACAGGTTGGGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCTGTACTGTTTGAACTaGTGGAGCCCATCTTCTATT | + |
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Preference number: 4 (lower is better) Translates to: TGWEQADLPPDSHRVSAWLYCLN*WSPSSI Trigger: AATAGAAGATGGGCTCCAGCAGTTCAAACAGTACAG...CCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCCCAACCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | TTCCCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATGAAGCAGGGATGGGCTaGGAAATCGCTCTTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: FPIGQRQKRKSCFLAGAHEAGMG*EIALGD Trigger: ATCTCCAAGAGCGATTTCTCAGCCCATCCCTGCTTC...ATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | CCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTATCATCCCAGTCCAGCTaGCAACAGCTTGTGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PIGQRQKRKSCFLAGAHLSSQSS*QQLVGL Trigger: CAGACCCACAAGCTGTTGGCAGCTGGACTGGGATGA...TAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | GAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATGCACTTGAGGCCATGTaGCTGCTGTACTGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: ELFLSRSSFTGTGWEQADALEAM*LLYCLN Trigger: GTTCAAACAGTACAGCAGTCACATGGCCTCAAGTGC...ATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | GAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATGGATGCTTTGCTGGCTaGTGTCATCTTCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ELFLSRSSFTGTGWEQADGCFAG*CHLQSS Trigger: AGAGCTCTGAAGATGACAGCAGCCAGCAAAGCATCC...ATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR GCA 90 bp | CTTGACCTCACCCACCTTCTTACACAGAGCTGCAGGAAGAAATTCTGGCCCAGGCTGCTGAGGATGCTTTaGTGGCTGCTGTCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LDLTHLLTQSCRKKFWPRLLRML*WLLSSS Trigger: TGAAGATGACAGCAGCCAGCAAAGCATCCTCAGCAG...CCTGGGCCAGAATTTCTTCCTGCAGCTCTGTGTAAGAAGGTGGGTGAGGTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204891.2 |
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| CDS-3UTR TCA 90 bp | TTCCCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATCTAGGGTGCTCTCTATaGTCTTTAGGCTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: FPIGQRQKRKSCFLAGAHLGCSL*SLGCLQ Trigger: CTGAAGACAGCCTAAAGATCATAGAGAGCACCCTAG...ATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | CAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGCTGCTGAGGATGCTTTaGTGGCTGCTGTCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QRQKRKSCFLAGAHLQAQLLRML*WLLSSS Trigger: TGAAGATGACAGCAGCCAGCAAAGCATCCTCAGCAG...CTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR CCA 90 bp | AGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCAGGAGGAAGACTCTGTaGAGTAAGAAGAAGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SCFLAGAHLQAQVGSRQIRRKTL*SKKKVD Trigger: ATCCACCTTCTTCTTACTCCACAGAGTCTTCCTCCT...GATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | CCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTAATATTGGATGATCCTTaGCTCTGGAAGGAGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PIGQRQKRKSCFLAGAHLILDDP*LWKEEE Trigger: TTCCTCCTCCTTCCAGAGCCAAGGATCATCCAATAT...TAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | GCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGAGTAAGAAGAAGGTaGATGTTTTCTTGGTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: AASEEEELFLSRSSFTGTGVRRR*MFSWSV Trigger: AACTGACCAAGAAAACATCCACCTTCTTCTTACTCC...TGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCTGAGAAATCGCTCTTaGAGATCACATTTTAGACAT | + |
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Preference number: 4 (lower is better) Translates to: EEEELFLSRSSFTGTGWELRNRS*RSHFRH Trigger: ATGTCTAAAATGTGATCTCCAAGAGCGATTTCTCAG...CTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR GCA 90 bp | GCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAGTCCCTGCTTCCGAGATGCAGGCCTaGAGCCTAATGAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: AFNYVCKHYQMIQERVPASEMQA*SLMKFP Trigger: AGGGAACTTCATTAGGCTGCAGGCCTGCATCTCGGA...AGCAGGGACTCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | GAGGCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGCAGGCAGGGAGACTCTaGTTGTGTTTGTGGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAYWAFNYVCKHYQMIQEQAGRL*LCLWIR Trigger: CCTGATCCACAAACACAACCAGAGTCTCCCTGCCTG...CTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CCA 90 bp | GCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAGTCCCTGCTGATGATCCTTGGCTCTaGAAGGAGGAGGAAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFNYVCKHYQMIQERVPADDPWL*KEEEDS Trigger: AGAGTCTTCCTCCTCCTTCCAGAGCCAAGGATCATC...AGCAGGGACTCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR TCA 90 bp | GCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAGACTGCTGTACTGTTTaGACTGCTGGAGCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AYWAFNYVCKHYQMIQERDCCTV*TAGAHL Trigger: AAGATGGGCTCCAGCAGTTCAAACAGTACAGCAGTC...TCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 90 bp | GCTGGCTGCTGTCATCTTCAGAGCTCTACGTGGGGCAGGAGCCACTaGGAGGGGAACCACTGCGGCTCGAACTCTGTTGGTCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGCCHLQSSTWGRSH*EGNHCGSNSVGLQL Trigger: CAGCTGCAGACCAACAGAGTTCGAGCCGCAGTGGTTCCCCTCCCAGTGGCTCCTGCCCCACGTAGAGCTCTGAAGATGACAGCAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS GCA 90 bp | CTCCCTCCTCCGAATCCGAAGGCAGGAAGGCTGCTGAGGATGCTTTaGTGGCTGCTGTCATCTTCAGAGCTCTACGTGGGGCAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPPNPKAGRLLRML*WLLSSSELYVGQEP Trigger: TGGCTCCTGCCCCACGTAGAGCTCTGAAGATGACAGCAGCCAGCAAAGCATCCTCAGCAGCCTTCCTGCCTTCGGATTCGGAGGAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR CAA 90 bp | GATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCTGTGTGCTGGCACCGGGCCTTCCTCCAGTTCTTaGACCACTTCTTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLPPDSHRVSAWLCAGTGPSSSS*TTSFPG Trigger: GCCTGGAAAAGAAGTGGTCAAAGAACTGGAGGAAGG...CCCGGTGCCAGCACACAGCCATGCACTCACCCGATGGCTGTCTGGGGGCAGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 90 bp | TGTGTAGAGCCGTCCCTGAGGCTTGGCATGGGCGCTGCTCAGATGTaGGTACAAGTGGCTCCCAACATGCAGAGGGTTGTAGGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CVEPSLRLGMGAAQM*VQVAPNMQRVVGEP Trigger: GGGCTCACCTACAACCCTCTGCATGTTGGGAGCCACTTGTACTCACATCTGAGCAGCGCCCATGCCAAGCCTCAGGGACGGCTCTACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 90 bp | ACGCTCCTCCTCTCCCTCCTCCGAATCCGAAGGCAGGAAGGCTGCTaGGGATGCTTTGCTGGCTGCTGTCATCTTCAGAGCTCTACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLLSLLRIRRQEGC*GCFAGCCHLQSSTW Trigger: CCACGTAGAGCTCTGAAGATGACAGCAGCCAGCAAAGCATCCTCAGCAGCCTTCCTGCCTTCGGATTCGGAGGAGGGAGAGGAGGAGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS-3UTR CAA 90 bp | GGAGCAGGCAGATCTGCCCCCAGACAGCCATCGGGTGAGTGCATGGCTGTGTGCGAAGTTCCCTCTCACTaGCACAAATGGGAGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: GAGRSAPRQPSGECMAVCEVPSH*HKWEDT Trigger: TGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTC...GCACACAGCCATGCACTCACCCGATGGCTGTCTGGGGGCAGATCTGCCTGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 90 bp | TTGCGCAGCTTGTGTAGAGCCGTCCCTGAGGCTTGGCATGGGCGCTaGTCAGATGTGAGTACAAGTGGCTCCCAACATGCAGAGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSLCRAVPEAWHGR*SDVSTSGSQHAEGC Trigger: ACAACCCTCTGCATGTTGGGAGCCACTTGTACTCACATCTGAGCAGCGCCCATGCCAAGCCTCAGGGACGGCTCTACACAAGCTGCGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 90 bp | AGGCAGGGAGACTCTGGTTGTGTTTGTGGATCAGGGGTTCCCCTCTaGCCAACAGCAGCCAGTCTCTCTTCAGCAAGCAGTGACACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQGDSGCVCGSGVPL*PTAASLSSASSDTG Trigger: CCCTGTGTCACTGCTTGCTGAAGAGAGACTGGCTGCTGTTGGCCAGAGGGGAACCCCTGATCCACAAACACAACCAGAGTCTCCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 90 bp | ATCCGGCTGGGGCCCATCAAACTGCAGGCTATCGAGAAGAAGTTCTaGAAGGCCTCACAGAGGTTGGGGCAGATGTCAACCCAGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IRLGPIKLQAIEKKF*KASQRLGQMSTQEG Trigger: ACCTTCCTGGGTTGACATCTGCCCCAACCTCTGTGAGGCCTTGCAGAACTTCTTCTCGATAGCCTGCAGTTTGATGGGCCCCAGCCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 90 bp | TCCAGGGCTGAGCAGCACTTGAGGCCATGTGACTGCTGTACTGTTTaGACTGCTGGAGCCCATCTTCTATTGCCAGGGGTAGTAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRAEQHLRPCDCCTV*TAGAHLLLPGVVRR Trigger: ACGCCTTACTACCCCTGGCAATAGAAGATGGGCTCCAGCAGTTCAAACAGTACAGCAGTCACATGGCCTCAAGTGCTGCTCAGCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | TTCCCCATTGGGCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATGGAGCCCATCTTCTATaGCCAGGGGTAGTAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FPIGQRQKRKSCFLAGAHGAHLL*PGVVRR Trigger: ACGCCTTACTACCCCTGGCAATAGAAGATGGGCTCC...ATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGCCCAATGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 90 bp | CAAATGGGAGGACACACTCATGCTGGTTCTGTACTGTGTATAAGCTaGACAGAGACATCCGGCTGGGGCCCATCAAACTGCAGGCTATCG | + |
|
Preference number: 5 (lower is better) Translates to: QMGGHTHAGSVLCIS*TETSGWGPSNCRLS Trigger: CGATAGCCTGCAGTTTGATGGGCCCCAGCCGGATGTCTCTGTTCAGCTTATACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 90 bp | AGCTCCGAGATGCAGGCCTGCAGCCTAATGAAGTTCCCTCTCACTTaGACAAATGGGAGGACACACTCATGCTGGTTCTGTACTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSEMQACSLMKFPLT*TNGRTHSCWFCTVY Trigger: ATACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCATTAGGCTGCAGGCCTGCATCTCGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 90 bp | TCATTGCTGGGTTCTTCAGTAGGAGATGGTGAGTCTGAACGCTCCTaGATGCCTTTTGTGACCTCAGCCACCTGCAGTCTTCTGACACTA | + |
|
Preference number: 5 (lower is better) Translates to: SLLGSSVGDGESERS*MPFVTSATCSLLTL Trigger: TAGTGTCAGAAGACTGCAGGTGGCTGAGGTCACAAAAGGCATCCAGGAGCGTTCAGACTCACCATCTCCTACTGAAGAACCCAGCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 90 bp | ATGAAGTTCCCTCTCACTTGCACAAATGGGAGGACACACTCATGCTaGTTCTGTACTGTGTATAAGCTGAACAGAGACATCCGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MKFPLTCTNGRTHSC*FCTVYKLNRDIRLG Trigger: CCCCAGCCGGATGTCTCTGTTCAGCTTATACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 90 bp | ACTAGATTTCAGAGCCTTGACCACTTGAAGCTTATACGGAGAGGCTaGAGCCAGGGATGCCATCTGGTAGAGTGTGCTGATGTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRFQSLDHLKLIRRG*SQGCHLVECADVSF Trigger: AAAGGAGACATCAGCACACTCTACCAGATGGCATCCCTGGCTTCAGCCTCTCCGTATAAGCTTCAAGTGGTCAAGGCTCTGAAATCTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | TGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATCTGCATAGAACTCTCATCATaGCTGGGTTCTTCAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFLAGAHLQAQVGSRQICIELSS*LGSSVG Trigger: TCCTACTGAAGAACCCAGCAATGATGAGAGTTCTAT...GCAGATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 90 bp | CTAATGAAGTTCCCTCTCACTTGCACAAATGGGAGGACACACTCATaGTGGTTCTGTACTGTGTATAAGCTGAACAGAGACATCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMKFPLTCTNGRTHS*WFCTVYKLNRDIRL Trigger: CAGCCGGATGTCTCTGTTCAGCTTATACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGCAGGCAGATAAGGTGGATGTTTTCTaGGTCAGTTTCACTGTTATG | + |
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Preference number: 5 (lower is better) Translates to: ELFLSRSSFTGTGWEQADKVDVF*VSFTVM Trigger: CATAACAGTGAAACTGACCAAGAAAACATCCACCTT...ATCTGCCTGCTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | CAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGCACATTTTAGACATATaGGATGATCCTTGGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QRQKRKSCFLAGAHLQAQHILDI*DDPWLW Trigger: CCAGAGCCAAGGATCATCCAATATGTCTAAAATGTG...CTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GCAGCGTCAGAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACACAGGGCATGAAAATGTaGTTGATTTGTTTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AASEEEELFLSRSSFTGTQGMKM*LICFQL Trigger: GAGCTGGAAACAAATCAACAACATTTTCATGCCCTG...TGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTCTGACGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GAAGAGGAAGAGCTGTTTCTTAGCCGGAGCTCATTTACAGGCACAGGTTGGGAGGAAAATGTTGTTGATTaGTTTCCAGCTCATCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: EEEELFLSRSSFTGTGWEENVVD*FPAHPS Trigger: ACTGGGATGAGCTGGAAACAAATCAACAACATTTTC...CTCCCAACCTGTGCCTGTAAATGAGCTCCGGCTAAGAAACAGCTCTTCCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GAGGCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAAGGCCTCACAGAGGTaGGGGCAGATGTCAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EAYWAFNYVCKHYQMIQEKASQR*GQMSTQ Trigger: CTGGGTTGACATCTGCCCCAACCTCTGTGAGGCCTT...CTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 90 bp | ACATATTGGATGATCCTTGGCTCTGGAAGGAGGAGGAAGACTCTGTaGAGTAAGAAGAAGGTGGATGTTTTCTTGGTCAGTTTCACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TYWMILGSGRRRKTL*SKKKVDVFLVSFTV Trigger: AACAGTGAAACTGACCAAGAAAACATCCACCTTCTTCTTACTCCACAGAGTCTTCCTCCTCCTTCCAGAGCCAAGGATCATCCAATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAAGACTCTGGTTGTGTTaGTGGATCAGGGGTTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AYWAFNYVCKHYQMIQERRLWLC*WIRGSP Trigger: AGGGGAACCCCTGATCCACAAACACAACCAGAGTCT...TCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GCTTACTGGGCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGATTATGCAGCCAGGCTTaGAAGAAGACCTCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYWAFNYVCKHYQMIQERLCSQA*KKTSML Trigger: CAGCATGGAGGTCTTCTTCAAAGCCTGGCTGCATAA...TCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGCCCAGTAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS-3UTR CAA 90 bp | GCATTTAATTATGTGTGTAAACACTATCAAATGATCCAAGAGAGAGTCCCTGCTGGCATGAAAATGTTGTaGATTTGTTTCCAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AFNYVCKHYQMIQERVPAGMKML*ICFQLI Trigger: GATGAGCTGGAAACAAATCAACAACATTTTCATGCC...AGCAGGGACTCTCTCTTGGATCATTTGATAGTGTTTACACACATAATTAAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 72 bp | GGCTTGCGCAGCTTGTGTAGAGCCGTCCCTGAGGCTTaGCATGGGCGCTGCTCAGATGTGAGTACAAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRSLCRAVPEA*HGRCSDVSTSG Trigger: GCCACTTGTACTCACATCTGAGCAGCGCCCATGCCAAGCCTCAGGGACGGCTCTACACAAGCTGCGCAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 90 bp | TCTCCCTCCTCCGAATCCGAAGGCAGGAAGGCTGCTGAGGATGCTTaGCTGGCTGCTGTCATCTTCAGAGCTCTACGTGGGGCAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSESEGRKAAEDA*LAAVIFRALRGAGA Trigger: GGCTCCTGCCCCACGTAGAGCTCTGAAGATGACAGCAGCCAGCAAAGCATCCTCAGCAGCCTTCCTGCCTTCGGATTCGGAGGAGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS TCA 72 bp | CCGTCCCTGAGGCTTGGCATGGGCGCTGCTCAGATGTaGGTACAAGTGGCTCCCAACATGCAGAGGGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PSLRLGMGAAQM*VQVAPNMQRVV Trigger: TACAACCCTCTGCATGTTGGGAGCCACTTGTACTCACATCTGAGCAGCGCCCATGCCAAGCCTCAGGGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 72 bp | CTCTCCCTCCTCCGAATCCGAAGGCAGGAAGGCTGCTaGGGATGCTTTGCTGGCTGCTGTCATCTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLLRIRRQEGC*GCFAGCCHLQS Trigger: GCTCTGAAGATGACAGCAGCCAGCAAAGCATCCTCAGCAGCCTTCCTGCCTTCGGATTCGGAGGAGGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113980.4 ENSMUST00000204891.2 |
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| CDS TCA 72 bp | AGTACAAGTGGCTCCCAACATGCAGAGGGTTGTAGGTaGGCCCCAGGTCCAGGCTGTCTAGGGTGCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: STSGSQHAEGCR*APGPGCLGCSL Trigger: TAGAGAGCACCCTAGACAGCCTGGACCTGGGGCTCACCTACAACCCTCTGCATGTTGGGAGCCACTTGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 72 bp | GGGCCCATCAAACTGCAGGCTATCGAGAAGAAGTTCTaGAAGGCCTCACAGAGGTTGGGGCAGATGTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: GPIKLQAIEKKF*KASQRLGQMST Trigger: GGTTGACATCTGCCCCAACCTCTGTGAGGCCTTGCAGAACTTCTTCTCGATAGCCTGCAGTTTGATGGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 72 bp | GGACACACTCATGCTGGTTCTGTACTGTGTATAAGCTaGACAGAGACATCCGGCTGGGGCCCATCAAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GHTHAGSVLCIS*TETSGWGPSNC Trigger: GCAGTTTGATGGGCCCCAGCCGGATGTCTCTGTTCAGCTTATACACAGTACAGAACCAGCATGAGTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 72 bp | GAGCAGCACTTGAGGCCATGTGACTGCTGTACTGTTTaGACTGCTGGAGCCCATCTTCTATTGCCAGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EQHLRPCDCCTV*TAGAHLLLPGV Trigger: TACCCCTGGCAATAGAAGATGGGCTCCAGCAGTTCAAACAGTACAGCAGTCACATGGCCTCAAGTGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS TCA 72 bp | TCGCAGATCCCACTAGATTTCAGAGCCTTGACCACTTaGAGCTTATACGGAGAGGCTGAAGCCAGGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQIPLDFRALTT*SLYGEAEARDA Trigger: GGCATCCCTGGCTTCAGCCTCTCCGTATAAGCTTCAAGTGGTCAAGGCTCTGAAATCTAGTGGGATCTGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 72 bp | GGTTCTTCAGTAGGAGATGGTGAGTCTGAACGCTCCTaGATGCCTTTTGTGACCTCAGCCACCTGCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSSVGDGESERS*MPFVTSATCSL Trigger: AAGACTGCAGGTGGCTGAGGTCACAAAAGGCATCCAGGAGCGTTCAGACTCACCATCTCCTACTGAAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 72 bp | GCTATCGAGAAGAAGTTCTGCAAGGCCTCACAGAGGTaGGGGCAGATGTCAACCCAGGAAGGTACGGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: AIEKKFCKASQR*GQMSTQEGTAI Trigger: TATTGCCGTACCTTCCTGGGTTGACATCTGCCCCAACCTCTGTGAGGCCTTGCAGAACTTCTTCTCGATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 72 bp | GATGCAGGCCTGCAGCCTAATGAAGTTCCCTCTCACTaGCACAAATGGGAGGACACACTCATGCTGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DAGLQPNEVPSH*HKWEDTLMLVL Trigger: CAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCATTAGGCTGCAGGCCTGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 90 bp | AAGCTCCGAGATGCAGGCCTGCAGCCTAATGAAGTTCCCTCTCACTaGCACAAATGGGAGGACACACTCATGCTGGTTCTGTACTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KLRDAGLQPNEVPSH*HKWEDTLMLVLYCV Trigger: TACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCATTAGGCTGCAGGCCTGCATCTCGGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 72 bp | ATGCAGGCCTGCAGCCTAATGAAGTTCCCTCTCACTTaGACAAATGGGAGGACACACTCATGCTGGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: MQACSLMKFPLT*TNGRTHSCWFC Trigger: ACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCATTAGGCTGCAGGCCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
||
| CDS CCA 72 bp | CTATCGAGAAGAAGTTCTGCAAGGCCTCACAGAGGTTaGGGCAGATGTCAACCCAGGAAGGTACGGCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: LSRRSSARPHRG*GRCQPRKVRQY Trigger: ATATTGCCGTACCTTCCTGGGTTGACATCTGCCCCAACCTCTGTGAGGCCTTGCAGAACTTCTTCTCGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
||
| CDS CAA 90 bp | AAACTGCAGGCTATCGAGAAGAAGTTCTGCAAGGCCTCACAGAGGTaGGGGCAGATGTCAACCCAGGAAGGTACGGCAATATTCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: KLQAIEKKFCKASQR*GQMSTQEGTAIFTM Trigger: CATTGTGAATATTGCCGTACCTTCCTGGGTTGACATCTGCCCCAACCTCTGTGAGGCCTTGCAGAACTTCTTCTCGATAGCCTGCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 90 bp | CAGCCAGTCTCTCTTCAGCAAGCAGTGACACAGGGCATGAAAATGTaGTTGATTTGTTTCCAGCTCATCCCAGTCCAGCTGCCAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: QPVSLQQAVTQGMKM*LICFQLIPVQLPTA Trigger: AGCTGTTGGCAGCTGGACTGGGATGAGCTGGAAACAAATCAACAACATTTTCATGCCCTGTGTCACTGCTTGCTGAAGAGAGACTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 90 bp | CCAGTCTCTCTTCAGCAAGCAGTGACACAGGGCATGAAAATGTTGTaGATTTGTTTCCAGCTCATCCCAGTCCAGCTGCCAACAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PVSLQQAVTQGMKML*ICFQLIPVQLPTAC Trigger: ACAAGCTGTTGGCAGCTGGACTGGGATGAGCTGGAAACAAATCAACAACATTTTCATGCCCTGTGTCACTGCTTGCTGAAGAGAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 72 bp | TCTACCTGTAACATTCGAAGCTCCGAGATGCAGGCCTaGAGCCTAATGAAGTTCCCTCTCACTTGCACAAAT | + |
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Preference number: 6 (lower is better) Translates to: STCNIRSSEMQA*SLMKFPLTCTN Trigger: ATTTGTGCAAGTGAGAGGGAACTTCATTAGGCTGCAGGCCTGCATCTCGGAGCTTCGAATGTTACAGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CCA 72 bp | CTGCAGCCTAATGAAGTTCCCTCTCACTTGCACAAATaGGAGGACACACTCATGCTGGTTCTGTACTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LQPNEVPSHLHK*EDTLMLVLYCV Trigger: TACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAACTTCATTAGGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 72 bp | AGGTACGGCAATATTCACAATGAGAAGCCTCGGAGGTaGATGACTAATTTTCATGGCAGCGGAGGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RYGNIHNEKPRR*MTNFHGSGGPS Trigger: AGAGGGACCTCCGCTGCCATGAAAATTAGTCATCAACCTCCGAGGCTTCTCATTGTGAATATTGCCGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 72 bp | CTTCAGCAAGCAGTGACACAGGGCATGAAAATGTTGTaGATTTGTTTCCAGCTCATCCCAGTCCAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LQQAVTQGMKML*ICFQLIPVQLP Trigger: TGGCAGCTGGACTGGGATGAGCTGGAAACAAATCAACAACATTTTCATGCCCTGTGTCACTGCTTGCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 90 bp | AACCCAGGAAGGTACGGCAATATTCACAATGAGAAGCCTCGGAGGTaGATGACTAATTTTCATGGCAGCGGAGGTCCCTCTACTAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: NPGRYGNIHNEKPRR*MTNFHGSGGPSTSS Trigger: ACTACTAGTAGAGGGACCTCCGCTGCCATGAAAATTAGTCATCAACCTCCGAGGCTTCTCATTGTGAATATTGCCGTACCTTCCTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 90 bp | AGGTGGATGTTTTCTTGGTCAGTTTCACTGTTATGCAGCCAGGCTTaGAAGAAGACCTCCATGCTGACAACATCGTTGTCTAGCGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RWMFSWSVSLLCSQA*KKTSMLTTSLSSVS Trigger: TGAGACGCTAGACAACGATGTTGTCAGCATGGAGGTCTTCTTCAAAGCCTGGCTGCATAACAGTGAAACTGACCAAGAAAACATCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS GCA 72 bp | TTCCCTCTCACTTGCACAAATGGGAGGACACACTCATaGTGGTTCTGTACTGTGTATAAGCTGAACAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: FPLTCTNGRTHS*WFCTVYKLNRD Trigger: GTCTCTGTTCAGCTTATACACAGTACAGAACCAGCATGAGTGTGTCCTCCCATTTGTGCAAGTGAGAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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| CDS CAA 72 bp | TCTCTTCAGCAAGCAGTGACACAGGGCATGAAAATGTaGTTGATTTGTTTCCAGCTCATCCCAGTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLQQAVTQGMKM*LICFQLIPVQL Trigger: CAGCTGGACTGGGATGAGCTGGAAACAAATCAACAACATTTTCATGCCCTGTGTCACTGCTTGCTGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113980.4 |
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