Pregenerated sensors for LZTS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035342Ensembl transcript IDs: ENSMUST00000039016.14, ENSMUST00000178087.3, ENSMUST00000179108.9, ENSMUST00000236377.2, ENSMUST00000237043.2, ENSMUST00000237148.2, ENSMUST00000237396.2
Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGAATGCTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTaGTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCC | + |
|
Preference number: 1 (lower is better) Translates to: PNARPRPFGSETWSA*SVDPRAGGPLWLRP Trigger: GGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAGCATTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTaGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAG | + |
|
Preference number: 1 (lower is better) Translates to: LGRGPLALRPGARAQ*IPGQVGLCGSDPLQ Trigger: CTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 90 bp | CCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTaGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGT | + |
|
Preference number: 1 (lower is better) Translates to: PGPAPPRGHVEGRHI*SSWLPSGSLWLQAG Trigger: ACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 90 bp | GCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCAGCTaGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGA | + |
|
Preference number: 1 (lower is better) Translates to: APPRGHVEGRHIWSS*LPSGSLWLQAGRCG Trigger: TCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR GCA 90 bp | AGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATaGGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: SSWLPSGSLWLQAGR*GDREAASFPSQLEW Trigger: CCACTCCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR GCA 90 bp | CTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCAGCTGGTTaGCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACA | + |
|
Preference number: 1 (lower is better) Translates to: LHVDMLRAGTSGAAG*PRALSGFRQVDAET Trigger: TGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR TCA 90 bp | TGGCAGAGTAGGCAGGAGCCTCTGGGTGACGGTGACACAGAGGGTTaGTTCTGCTGCTTCTCCAAGTTACGGAGCCACCCGAATGCTCGG | + |
|
Preference number: 1 (lower is better) Translates to: WQSRQEPLGDGDTEG*FCCFSKLRSHPNAR Trigger: CCGAGCATTCGGGTGGCTCCGTAACTTGGAGAAGCAGCAGAATCAACCCTCTGTGTCACCGTCACCCAGAGGCTCCTGCCTACTCTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 90 bp | TTGGTCACAAACACAAATAAACAAGACATTGCTGGGTTCTTCCTTTaGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: LVTNTNKQDIAGFFL*SDFSPLSPEEACRA Trigger: AGCTCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCCAGCAATGTCTTGTTTATTTGTGTTTGTGACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 90 bp | ACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTaGTCACAAACACAAATAAACAAGACATTGCTGGGTTCTTCCTTT | + |
|
Preference number: 1 (lower is better) Translates to: TSGNEAVTLELGRTA*SQTQINKTLLGSSF Trigger: AAAGGAAGAACCCAGCAATGTCTTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGCAGGTGGGCCTCTGTaGCTCAGACCCCTTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LGRGPLALRPGARAQWIPAGGPL*LRPLAE Trigger: CTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGC...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCTTCAGGCAGGTAGATaGGGAGACAGGGAAGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GISPMPGPAPPRGHVEGRLQAGR*GDREAA Trigger: GGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAG...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACCTTCCCAGCTGGAGTaGGCTGGCAGTGGCGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: CPALPLHVDMLRAGTSGAPSQLE*AGSGDS Trigger: ACTGTCGCCACTGCCAGCCCACTCCAGCTGGGAAGG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACTTTCCCTTCCCAGCTaGAGTGGGCTGGCAGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: CPALPLHVDMLRAGTSGALSLPS*SGLAVA Trigger: CGCCACTGCCAGCCCACTCCAGCTGGGAAGGGAAAG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGGCAGGTGGGCCTCTGTaGCTCAGACCCCTTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPAGGPL*LRPLAE Trigger: CTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGC...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGGAGGGCAGGCACATCTaGAGCAGCTGGTTGCCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPEGRHI*SSWLPS Trigger: CGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTC...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGCAGGTGGGCCTCTGTaGCTCAGACCCCTTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCAGGPL*LRPLAE Trigger: CTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGC...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTCCTTCCCAGCTGGAGTaGGCTGGCAGTGGCGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGSLWLQAGRCGDREAASPSQLE*AGSGDS Trigger: ACTGTCGCCACTGCCAGCCCACTCCAGCTGGGAAGG...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAGCAGGTGGGCCTCTGTaGCTCAGACCCCTTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GFFLWSDFSPLSPEEACRAGGPL*LRPLAE Trigger: CTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGC...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAGAGGGCAGGCACATCTaGAGCAGCTGGTTGCCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GFFLWSDFSPLSPEEACREGRHI*SSWLPS Trigger: CGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTC...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAGCGACAGTGAGGGAGTaGAATGGCAGAGTAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GFFLWSDFSPLSPEEACRATVRE*NGRVGR Trigger: CCTGCCTACTCTGCCATTTCACTCCCTCACTGTCGC...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGGATCCCCGGGCAGGTaGGCCTCTGTGGCTCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: GRNPGTREDGLVTNTNKQGSPGR*ASVAQT Trigger: GGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGGGTGACACAGAGGGTTaGTTCTGCTGCTTCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FRQVDAETGKQPLSLPSWGDTEG*FCCFSK Trigger: CTTGGAGAAGCAGCAGAATCAACCCTCTGTGTCACC...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGCTTTCCCTTCCCAGCTaGAGTGGGCTGGCAGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: KYTSGNEAVTLELGRTAWLSLPS*SGLAVA Trigger: CGCCACTGCCAGCCCACTCCAGCTGGGAAGGGAAAG...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCTTTCCCTTCCCAGCTaGAGTGGGCTGGCAGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: EKYTSGNEAVTLELGRTALSLPS*SGLAVA Trigger: CGCCACTGCCAGCCCACTCCAGCTGGGAAGGGAAAG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGTTCTTCCTTTGGTCTaGCTTCAGCCCCCTCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GRNPGTREDGLVTNTNKQVLPLV*LQPPQP Trigger: GGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAAC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGCTTTCCCTTCCCAGCTaGAGTGGGCTGGCAGTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: CEKYTSGNEAVTLELGRTLSLPS*SGLAVA Trigger: CGCCACTGCCAGCCCACTCCAGCTGGGAAGGGAAAG...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTCCACGTGGACATGTTaGGGGCAGGCACATCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EKYTSGNEAVTLELGRTASTWTC*GQAHLE Trigger: CTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGA...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGGCTGGGTTCTTCCTTTaGTCTGACTTCAGCCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KYTSGNEAVTLELGRTAWAGFFL*SDFSPL Trigger: GAGGGGGCTGAAGTCAGACCAAAGGAAGAACCCAGC...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CAA 90 bp | GAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGACATaGCTGGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ELGRTAWSQTQINKT*LGSSFGLTSAPSAQ Trigger: CTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCCAGCAATGTCTTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGGTGACACAGAGGGTTaGTTCTGCTGCTTCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GRNPGTREDGLVTNTNKQGDTEG*FCCFSK Trigger: CTTGGAGAAGCAGCAGAATCAACCCTCTGTGTCACC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGGTGACACAGAGGGTTaGTTCTGCTGCTTCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: CEKYTSGNEAVTLELGRTGDTEG*FCCFSK Trigger: CTTGGAGAAGCAGCAGAATCAACCCTCTGTGTCACC...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR GCA 72 bp | CGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTaGTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RPRPFGSETWSA*SVDPRAGGPLW Trigger: CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 72 bp | CCGAATGCTCGGCCGAGGCCCTTTGGCTCTGAGACCTaGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PNARPRPFGSET*SACSVDPRAGG Trigger: CCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAGCATTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 72 bp | GGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTaGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GPLALRPGARAQ*IPGQVGLCGSD Trigger: GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 72 bp | GCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTaGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: APPRGHVEGRHI*SSWLPSGSLWL Trigger: AAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 72 bp | CGTGGACATGTTGAGGGCAGGCACATCTGGAGCAGCTaGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RGHVEGRHIWSS*LPSGSLWLQAG Trigger: ACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTCAACATGTCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR GCA 72 bp | TTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATaGGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSGSLWLQAGR*GDREAASFPSQ Trigger: CTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR TCA 72 bp | AGGCAGGAGCCTCTGGGTGACGGTGACACAGAGGGTTaGTTCTGCTGCTTCTCCAAGTTACGGAGCCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: RQEPLGDGDTEG*FCCFSKLRSHP Trigger: CGGGTGGCTCCGTAACTTGGAGAAGCAGCAGAATCAACCCTCTGTGTCACCGTCACCCAGAGGCTCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR GCA 72 bp | GACATGTTGAGGGCAGGCACATCTGGAGCAGCTGGTTaGCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DMLRAGTSGAAG*PRALSGFRQVD Trigger: ATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGATGTGCCTGCCCTCAACATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCTCCACGTGGACATGTaGAGGGCAGGCACATCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EKYTSGNEAVTLELGRTALHVDM*RAGTSG Trigger: TCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| 3UTR CCA 72 bp | AACACAAATAAACAAGACATTGCTGGGTTCTTCCTTTaGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NTNKQDIAGFFL*SDFSPLSPEEA Trigger: AGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCCAGCAATGTCTTGTTTATTTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGTGGCACGGCCCTCACTaGCCCGCAAGGTGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRWHGPH*PARWPG Trigger: CCCGGGCCACCTTGCGGGTCAGTGAGGGCCGTGCCA...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCCTCGGCCAGGGCCGTaGGAGGGCAGGTGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRPRPGP*EGRCPP Trigger: AGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGG...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGTGGCACGGCCCTCACTaGCCCGCAAGGTGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQWHGPH*PARWPG Trigger: CCCGGGCCACCTTGCGGGTCAGTGAGGGCCGTGCCA...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCGCTGCGTGGCCTGCTaGGCCTGGGCTGCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDRCVAC*AWAAQS Trigger: GGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCG...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCTCGGCCAGGGCCGTaGGAGGGCAGGTGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TWSACSVDPRAGGPLWLRPRPGP*EGRCPP Trigger: AGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGG...TCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACAGGGACCCCTCGGGCTaGACCAGGCAGTGCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDRDPSG*TRQCPS Trigger: CGAGGGGCACTGCCTGGTCCAGCCCGAGGGGTCCCT...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCTGCTGCGCCTGGGCTaGACAGTCCTCCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDLLRLG*TVLPSL Trigger: GAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAG...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACGACAGCCTTCCTCGGTaGCACAGCCGGGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDDSLPR*HSRAER Trigger: CCGCTCTGCCCGGCTGTGCCACCGAGGAAGGCTGTC...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTCCTCGGCCAGGGCCGTaGGAGGGCAGGTGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGPRPGP*EGRCPP Trigger: AGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGG...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACGGTCTCCTCCAGCCGTaGCCCGAGTTCCCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDGLLQP*PEFPLL Trigger: GAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACC...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGGGTCTCCTCCAGCCGTaGCCCGAGTTCCCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRGLLQP*PEFPLL Trigger: GAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACC...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGGGGGCAGGGCCGGCCTaGGATAAGACTGCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRGAGPA*DKTAHA Trigger: AGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCC...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACGGACCGGCCACTGTCTaGATGGGAGGGCCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDGPATV*MGGPSR Trigger: CCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCC...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGTCTCCACCAGAACTaGTGCCAGGGGAGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGRGPLALRPGARAQWIPGLHQN*CQGRPG Trigger: CCCGGGCCTCCCCTGGCAGCAGTTCTGGTGGAGACC...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCTGTCCCGCAGCTGCTaGAGCTCTGCCTCGCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDLSRSC*SSASRS Trigger: AGACCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAG...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTCAGGCCTCCAGCTCCTaGTCCCGAGCTCGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGQASSS*SRARAA Trigger: GGCAGCCCGAGCTCGGGAGCAGGAGCTGGAGGCCTG...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGGTGGCCTGCTGCGCCTaGGCTGCACAGTCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWVACCA*AAQSSP Trigger: AGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCAC...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGGGAACGGGTCGGTGGTaGCAGGGGGTACAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRGTGRW*QGVQGD Trigger: ATCCCCCTGTACCCCCTGCCACCACCGACCCGTTCC...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGGGGCAGGGCCGGCCTaGGATAAGACTGCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQGAGPA*DKTAHA Trigger: AGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCC...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACGCTCGGCACCTCCAGTaGTGTAGGTGGGCAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDARHLQ*CRWASW Trigger: CCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGC...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGGGCTGGACCAGGCAGTaGCCCTCGGCCAGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPGWTRQ*PSARAV Trigger: CACGGCCCTGGCCGAGGGGCACTGCCTGGTCCAGCC...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTCTGCTGCGCCTGGGCTaGACAGTCCTCCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGLLRLG*TVLPSL Trigger: GAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAG...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGAGCAGCCCATCCTGCTaGCGGAAGAAGGTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRSSPSC*RKKVGP Trigger: TGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCT...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGAGGGATGAGCTTTGGTaGGGGCCCACGGAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWRDELW*GPTEVG Trigger: GCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCT...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCACCTGGGGAGTTGGTaGTTGGCTCGGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDHLGSW*LARHLQ Trigger: CTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTG...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCGCCCACCTGGGGAGTTaGTGGTTGGCTCGGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSAHLGS*WLARHL Trigger: GAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGC...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGCCCACCTGGGGAGTTaGTGGTTGGCTCGGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQAHLGS*WLARHL Trigger: GAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGC...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGGGGCAGGTGCCCACCTaGGGAGTTGGTGGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWGQVPT*GVGGWL Trigger: GAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCC...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCAGTGGCCTGCTGCGCCTaGGCTGCACAGTCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGAVACCA*AAQSSP Trigger: AGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCAC...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTAGCTGCAGCAGCTGTTaGGCCCGCTGGACGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGSCSSC*ARWTRC Trigger: GCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCT...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGCTGCCTCGCGGTCTCTaGGCTTCCCTTCCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQLPRGL*ASLPGH Trigger: GTGTCCTGGAAGGGAAGCTCAGAGACCGCGAGGCAG...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGAGTGGCTGTCTCACGTaGGGGCTCCAGAGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWSGCLT*GLQRHW Trigger: CCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACT...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGTAGCAGCCCATCCTaGTGGCGGAAGAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRGPLALRPGARAQWIPGSSPS*WRKKVG Trigger: GCCCACCTTCTTCCGCCAGCAGGATGGGCTGCTACC...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACACAGCTGTGTCAGGCTaGCCTGGCTCCCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDTAVSG*PGSQIA Trigger: GGCTATCTGGGAGCCAGGGCAGCCTGACACAGCTGT...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGATACTGTCCCGCAGCTaGTGCAGCTCTGCCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWILSRS*CSSASR Trigger: CCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAGTAT...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCAGCAGCCCATCCTGCTaGCGGAAGAAGGTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSSSPSC*RKKVGP Trigger: TGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCT...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCATCACTGCTGGGGCTaGGAGGAGACTCTGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDHHCWG*EETLSG Trigger: TCCGGACAGAGTCTCCTCCCAGCCCCAGCAGTGATG...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSDRDEL*WGPTEV Trigger: CACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTC...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCCACCTGGGGAGTTGGTaGTTGGCTCGGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSHLGSW*LARHLQ Trigger: CTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTG...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGAGGGACCCCTCGGGCTaGACCAGGCAGTGCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPRDPSG*TRQCPS Trigger: CGAGGGGCACTGCCTGGTCCAGCCCGAGGGGTCCCT...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCGGCCACTGTCTGAATaGGAGGGCCCAGTAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWRPLSE*EGPVGT Trigger: GGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCG...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGGGACCGGCCACTGTCTaGATGGGAGGGCCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCPRALSGFRQVDAETGGPATV*MGGPSR Trigger: CCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCC...CCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCAAGGAGCCCGTGCTTTTaGTGGAGGAGGACCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGARSPCF*WRRTGH Trigger: GTGGCCGGTCCTCCTCCAGCAAAAGCACGGGCTCCT...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACTGCCGTGCCCCGAATaGCTGACACACTGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGALPCPE*LTHCGL Trigger: GAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGAGTTGCTGCAGTTCCTaGTCCAGCTGCCGGTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRSCCSS*SSCRLR Trigger: GCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACT...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGAGTTTTGGGGGCAGTaGCTGTCTCACGTGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQEFWGQ*LSHVRA Trigger: AGCCCGCACGTGAGACAGCCACTGCCCCCAAAACTC...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGAGAGTTTTGGGGGCAGTaGCTGTCTCACGTGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWSACSVDPRAGGPLWLREFWGQ*LSHVRA Trigger: AGCCCGCACGTGAGACAGCCACTGCCCCCAAAACTC...TCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGCTGGCGGAAGAAGGTaGGCCCAGGGACACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQAGGRR*AQGHHD Trigger: ATCATGGTGTCCCTGGGCCCACCTTCTTCCGCCAGC...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGGCTGGCGGAAGAAGGTaGGCCCAGGGACACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWAGGRR*AQGHHD Trigger: ATCATGGTGTCCCTGGGCCCACCTTCTTCCGCCAGC...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCTGTGTCAGGCTGCCCTaGCTCCCAGATAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRGPLALRPGARAQWIPCVRLP*LPDSPA Trigger: TGCTGGGCTATCTGGGAGCCAGGGCAGCCTGACACA...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCAGCCCGTGCTTTTGCTaGAGGAGGACCGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRGPLALRPGARAQWIPSPCFC*RRTGHC Trigger: ACAGTGGCCGGTCCTCCTCCAGCAAAAGCACGGGCT...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGAGCTGCAGCAGCTGTTaGGCCCGCTGGACGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPSCSSC*ARWTRC Trigger: GCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCT...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGATACTGTCCCGCAGCTaGTGCAGCTCTGCCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCPRALSGFRQVDAETGILSRS*CSSASR Trigger: CCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAGTAT...CCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGAGTTGCTGCAGTTCCTaGTCCAGCTGCCGGTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWSCCSS*SSCRLR Trigger: GCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACT...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCTCCAGAGGCACTaGCAGAGTGTGCACAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGGLQRH*QSVHNG Trigger: GCCATTGTGCACACTCTGCCAGTGCCTCTGGAGCCC...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGACAGCCTTCCTCGGTaGCACAGCCGGGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCDSLPR*HSRAER Trigger: CCGCTCTGCCCGGCTGTGCCACCGAGGAAGGCTGTC...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACATCACTGCTGGGGCTaGGAGGAGACTCTGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGAHHCWG*EETLSG Trigger: TCCGGACAGAGTCTCCTCCCAGCCCCAGCAGTGATG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGGCCCACCTGGGGAGTTaGTGGTTGGCTCGGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPAHLGS*WLARHL Trigger: GAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGC...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGTGGCCTGCTGCGCCTaGGCTGCACAGTCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCVACCA*AAQSSP Trigger: AGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCAC...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTAGCTGCAGCAGCTGTTaGGCCCGCTGGACGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASSCSSC*ARWTRC Trigger: GCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCT...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRRSCSS*AKSSCN Trigger: GTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCG...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACTGCCCGCTGCACCTTaGCCTCATCACTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGALPAAP*PHHSLP Trigger: TGGCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| 3UTR CAA 72 bp | AGTTACGGAGCCACCCGAATGCTCGGCCGAGGCCCTTaGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SYGATRMLGRGP*ALRPGARAQWI Trigger: GATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAGCATTCGGGTGGCTCCGTAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTGGACCGGCCACTGTCTaGATGGGAGGGCCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASGPATV*MGGPSR Trigger: CCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCC...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGCTGCCTCGCGGTCTCTaGGCTTCCCTTCCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPLPRGL*ASLPGH Trigger: GTGTCCTGGAAGGGAAGCTCAGAGACCGCGAGGCAG...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCAGGGAGATCTCACCTaGTTTCTGACACACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GISPMPGPAPPRGHVEGRQGDLT*FLTHLP Trigger: TGGGAGGTGTGTCAGAAATCAGGTGAGATCTCCCTG...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGTGGACCAGCTCTGCCTaGGATTCCTTCAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLALRPGARAQWIPGQWTSSA*DSFSCC Trigger: GCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCA...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGGGTCTCCACCAGAACTaGTGCCAGGGGAGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWGLHQN*CQGRPG Trigger: CCCGGGCCTCCCCTGGCAGCAGTTCTGGTGGAGACC...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGACGCTGCGTGGCCTGCTaGGCCTGGGCTGCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRRCVAC*AWAAQS Trigger: GGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCG...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCAACTGGCGCTTCTCTTaGTGCAGCTGGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSNWRFS*CSWNTC Trigger: GCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTT...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACTGGGCAAAGTCATCCTaGAACTGGCGCTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGARAQWIPGQVGLCGSDWAKSS*NWRFSC Trigger: GCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCA...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTCCAGCCGCTGCCCGCTaGACCTTGGCCTCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASPAAAR*TLASSL Trigger: GAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCTGG...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTCTGCCGTGCCCCGAATaGCTTCTCCAGCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGLPCPE*LLQLSR Trigger: TCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAG...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCCATTGCTGGAGTTTTaGGGGCAGTGGCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWPLLEF*GQWLSH Trigger: GTGAGACAGCCACTGCCCCCAAAACTCCAGCAATGG...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCGGTAAAGCTATTGCCTaGGACAGCCTTCCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSGKAIA*DSLPRW Trigger: CCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACC...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCAGGGATGAGCTTTGGTaGGGGCCCACGGAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCRDELW*GPTEVG Trigger: GCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCT...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAAGGGACCCCTCGGGCTaGACCAGGCAGTGCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRRDPSG*TRQCPS Trigger: CGAGGGGCACTGCCTGGTCCAGCCCGAGGGGTCCCT...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGGGGGCAGGGCCGGCCTaGGATAAGACTGCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWGAGPA*DKTAHA Trigger: AGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCC...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTCTGCCTCGCGGTCTCTaGGCTTCCCTTCCAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASLPRGL*ASLPGH Trigger: GTGTCCTGGAAGGGAAGCTCAGAGACCGCGAGGCAG...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCAGGAGCCCGTGCTTTTaGTGGAGGAGGACCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCRSPCF*WRRTGH Trigger: GTGGCCGGTCCTCCTCCAGCAAAAGCACGGGCTCCT...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTCTGCCGTGCCCCGAATaGCTGACACACTGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASLPCPE*LTHCGL Trigger: GAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAG...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCTGGAACACCTGCAGCTaGAGCAGCTGTTGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCWNTCS*SSCWAR Trigger: GCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTTCCA...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTAACTGGCGCTTCTCTTaGTGCAGCTGGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGNWRFS*CSWNTC Trigger: GCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTT...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCCCTTGCAGAGCTGGGCAAAGTCATCCTaGAACTGGCGCTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQWIPGQVGLCGSDPLQSWAKSS*NWRFSC Trigger: GCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCA...GCTCTGCAAGGGGTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCTGGGCAAAGTCATCCTaGAACTGGCGCTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRGPLALRPGARAQWIPWAKSS*NWRFSC Trigger: GCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCA...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGCGCCACCAGCTCACTaGCCTTCTGGACCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCAPPAH*PSGPAL Trigger: CAGAGCTGGTCCAGAAGGGCAGTGAGCTGGTGGCGC...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGTAAAGCTATTGCCTaGGACAGCCTTCCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPFGSETWSACSVDPRAGGKAIA*DSLPRW Trigger: CCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACC...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGAGGGATGAGCTTTGGTaGGGGCCCACGGAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWRDELW*GPTEVG Trigger: GCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCT...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASDRDEL*WGPTEV Trigger: CACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTC...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCTGGCTTGAAGGCTGTTaGCCGGATCAGGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGRGPLALRPGARAQWIPWLEGC*PDQDLL Trigger: GAGAAGATCCTGATCCGGCCAACAGCCTTCAAGCCA...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGTGTGTCAGGCTGCCCTaGCTCCCAGATAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPCVRLP*LPDSPA Trigger: TGCTGGGCTATCTGGGAGCCAGGGCAGCCTGACACA...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTCACCTGGGGAGTTGGTaGTTGGCTCGGCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASHLGSW*LARHLQ Trigger: CTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTG...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCCGGCCACTGTCTGAATaGGAGGGCCCAGTAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCRPLSE*EGPVGT Trigger: GGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCG...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGARSCSS*AKSSCN Trigger: GTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGCTGCCCGCTGCACCTTaGCCTCATCACTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPLPAAP*PHHSLP Trigger: TGGCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAG...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCACAGCTGTGTCAGGCTaGCCTGGCTCCCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCTAVSG*PGSQIA Trigger: GGCTATCTGGGAGCCAGGGCAGCCTGACACAGCTGT...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGGCTCGGCACCTCCAGTaGTGTAGGTGGGCAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWARHLQ*CRWASW Trigger: CCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGC...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGACTGTCCCGCAGCTGCTaGAGCTCTGCCTCGCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRLSRSC*SSASRS Trigger: AGACCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAG...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACTTCTGGACCAGCTCTaGCTGAGATTCCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TWSACSVDPRAGGPLWLRLLDQL*LRFLQL Trigger: CAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAG...TCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTTCTGGACCAGCTCTaGCTGAGATTCCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWLLDQL*LRFLQL Trigger: CAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAG...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGGCGCCACCAGCTCACTaGCCTTCTGGACCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWAPPAH*PSGPAL Trigger: CAGAGCTGGTCCAGAAGGGCAGTGAGCTGGTGGCGC...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTGGCCTCATCACTCTCTaGCAGGAGGAACGGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASGLITL*QEERVG Trigger: ACCGACCCGTTCCTCCTGGCAGAGAGTGATGAGGCC...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGCCTCATCACTCTCTaGCAGGAGGAACGGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCGLITL*QEERVG Trigger: ACCGACCCGTTCCTCCTGGCAGAGAGTGATGAGGCC...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGACCAGCCGCTGCCCGCTaGACCTTGGCCTCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRPAAAR*TLASSL Trigger: GAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCTGG...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGGGTAAAGCTATTGCCTaGGACAGCCTTCCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCPRALSGFRQVDAETGGKAIA*DSLPRW Trigger: CCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACC...CCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWDRDEL*WGPTEV Trigger: CACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTC...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCATGGCTTGAAGGCTGTTaGCCGGATCAGGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPALPLHVDMLRAGTSGAWLEGC*PDQDLL Trigger: GAGAAGATCCTGATCCGGCCAACAGCCTTCAAGCCA...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGGGCTGGACCAGGCAGTaGCCCTCGGCCAGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWGWTRQ*PSARAV Trigger: CACGGCCCTGGCCGAGGGGCACTGCCTGGTCCAGCC...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAATACTGTCCCGCAGCTaGTGCAGCTCTGCCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRILSRS*CSSASR Trigger: CCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAGTAT...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGATGGAACACCTGCAGCTaGAGCAGCTGTTGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRWNTCS*SSCWAR Trigger: GCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTTCCA...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGGGTAAAGCTATTGCCTaGGACAGCCTTCCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPGKAIA*DSLPRW Trigger: CCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACC...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGCATCACTGCTGGGGCTaGGAGGAGACTCTGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWHHCWG*EETLSG Trigger: TCCGGACAGAGTCTCCTCCCAGCCCCAGCAGTGATG...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGTGGCTTGAAGGCTGTTaGCCGGATCAGGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGCPRALSGFRQVDAETGWLEGC*PDQDLL Trigger: GAGAAGATCCTGATCCGGCCAACAGCCTTCAAGCCA...CCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGCTGAAGGGCAGCCACTaGCCCAACCACTCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWLKGSH*PNHSVP Trigger: TGGCACTGAGTGGTTGGGCCAGTGGCTGCCCTTCAG...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGTGTAGGTGGGCAAGCTaGATAAAGAATTTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SETWSACSVDPRAGGPLWCRWAS*IKNFGQ Trigger: CTGGCCGAAATTCTTTATCCAGCTTGCCCACCTACA...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGCGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPRSCSS*AKSSCN Trigger: GTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCG...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTGGCTGGACCAGGCAGTaGCCCTCGGCCAGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAGWTRQ*PSARAV Trigger: CACGGCCCTGGCCGAGGGGCACTGCCTGGTCCAGCC...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGACTGAAGGGCAGCCACTaGCCCAACCACTCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRLKGSH*PNHSVP Trigger: TGGCACTGAGTGGTTGGGCCAGTGGCTGCCCTTCAG...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGATGCCTGACACACTGTaGCCTCACTCTCATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: AGCPRALSGFRQVDAETGMPDTL*PHSHPY Trigger: GTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCAT...CCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTCAGGGAGATCTCACCTaGTTTCTGACACACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSLWLQAGRCGDREAASQGDLT*FLTHLP Trigger: TGGGAGGTGTGTCAGAAATCAGGTGAGATCTCCCTG...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGTGGCACGGCCCTCACTaGCCCGCAAGGTGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTWHGPH*PARWPG Trigger: CCCGGGCCACCTTGCGGGTCAGTGAGGGCCGTGCCA...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGATGGCGCTTCTCTTGCTaGAGCTGGAACACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRWRFSC*SWNTCS Trigger: GCTGCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCA...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCAGGCCTCCAGCTCCTaGTCCCGAGCTCGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAQASSS*SRARAA Trigger: GGCAGCCCGAGCTCGGGAGCAGGAGCTGGAGGCCTG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGTGGCCTGCTGCGCCTaGGCTGCACAGTCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQVACCA*AAQSSP Trigger: AGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCAC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGGGTCTCCTCCAGCCGTaGCCCGAGTTCCCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWGLLQP*PEFPLL Trigger: GAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACC...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGGGGCAGGGCCGGCCTaGGATAAGACTGCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQGAGPA*DKTAHA Trigger: AGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGCAGGGAGATCTCACCTaGTTTCTGACACACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWQGDLT*FLTHLP Trigger: TGGGAGGTGTGTCAGAAATCAGGTGAGATCTCCCTG...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGCGCTGCGTGGCCTGCTaGGCCTGGGCTGCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTRCVAC*AWAAQS Trigger: GGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCG...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGAAACTGGCGCTTCTCTTaGTGCAGCTGGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRNWRFS*CSWNTC Trigger: GCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTT...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGTGGGCAAAGTCATCCTaGAACTGGCGCTTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRQVDAETGKQPLSLPSWWAKSS*NWRFSC Trigger: GCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCA...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGCAGGCCTCCAGCTCCTaGTCCCGAGCTCGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTQASSS*SRARAA Trigger: GGCAGCCCGAGCTCGGGAGCAGGAGCTGGAGGCCTG...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTGACAGCCTTCCTCGGTaGCACAGCCGGGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTADSLPR*HSRAER Trigger: CCGCTCTGCCCGGCTGTGCCACCGAGGAAGGCTGTC...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCATGCCTGACACACTGTaGCCTCACTCTCATCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCMPDTL*PHSHPY Trigger: GTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCAT...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGACGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRRSCSS*AKSSCN Trigger: GTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCG...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGGAACGGGTCGGTGGTaGCAGGGGGTACAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQGTGRW*QGVQGD Trigger: ATCCCCCTGTACCCCCTGCCACCACCGACCCGTTCC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAAGTGGCTGTCTCACGTaGGGGCTCCAGAGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQSGCLT*GLQRHW Trigger: CCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACT...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGGTAGCAGCCCATCCTaGTGGCGGAAGAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQGSSPS*WRKKVG Trigger: GCCCACCTTCTTCCGCCAGCAGGATGGGCTGCTACC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAACTGCCGTGCCCCGAATaGCTGACACACTGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQLPCPE*LTHCGL Trigger: GAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAG...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGCTGCTGCGCCTGGGCTaGACAGTCCTCCCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTLLRLG*TVLPSL Trigger: GAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAG...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAATGGAACACCTGCAGCTaGAGCAGCTGTTGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQWNTCS*SSCWAR Trigger: GCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTTCCA...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTGGAACACCTGCAGCTaGAGCAGCTGTTGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWWNTCS*SSCWAR Trigger: GCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTTCCA...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGGCGCCACCAGCTCACTaGCCTTCTGGACCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWAPPAH*PSGPAL Trigger: CAGAGCTGGTCCAGAAGGGCAGTGAGCTGGTGGCGC...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCCAGCCGCTGCCCGCTaGACCTTGGCCTCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAPAAAR*TLASSL Trigger: GAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCTGG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAAGCAGCCCATCCTGCTaGCGGAAGAAGGTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQSSPSC*RKKVGP Trigger: TGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCT...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGACAGCCTTCCTCGGTaGCACAGCCGGGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTDSLPR*HSRAER Trigger: CCGCTCTGCCCGGCTGTGCCACCGAGGAAGGCTGTC...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTGGGCAGGTGCCCACCTaGGGAGTTGGTGGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAGQVPT*GVGGWL Trigger: GAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCC...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGAGCTGCAGCAGCTGTTaGGCCCGCTGGACGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTSCSSC*ARWTRC Trigger: GCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCT...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTAGTGGCTGTCTCACGTaGGGGCTCCAGAGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTASGCLT*GLQRHW Trigger: CCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACT...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCAGCCCAGAAGAGGCTTGCAGACTTCTGGACCAGCTCTaGCTGAGATTCCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFFLWSDFSPLSPEEACRLLDQL*LRFLQL Trigger: CAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAG...TCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTADRDEL*WGPTEV Trigger: CACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTC...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGCTGAAGGGCAGCCACTaGCCCAACCACTCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWLKGSH*PNHSVP Trigger: TGGCACTGAGTGGTTGGGCCAGTGGCTGCCCTTCAG...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGGGCAGGTGCCCACCTaGGGAGTTGGTGGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTGQVPT*GVGGWL Trigger: GAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCC...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAAGCCCGTGCTTTTGCTaGAGGAGGACCGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQSPCFC*RRTGHC Trigger: ACAGTGGCCGGTCCTCCTCCAGCAAAAGCACGGGCT...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGCTGCCCGCTGCACCTTaGCCTCATCACTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWLPAAP*PHHSLP Trigger: TGGCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAG...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR TCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTTCCAGAGACAGGGATaGGCTTTGGTGGGGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAFQRQG*ALVGAH Trigger: GTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAA...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTACAGCTGTGTCAGGCTaGCCTGGCTCCCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTATAVSG*PGSQIA Trigger: GGCTATCTGGGAGCCAGGGCAGCCTGACACAGCTGT...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTGGCGCTTCTCTTGCTaGAGCTGGAACACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWWRFSC*SWNTCS Trigger: GCTGCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCA...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGAGTTGCTGCAGTTCCTaGTCCAGCTGCCGGTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWSCCSS*SSCRLR Trigger: GCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACT...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTGGGCTCCAGAGGCACTaGCAGAGTGTGCACAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAGLQRH*QSVHNG Trigger: GCCATTGTGCACACTCTGCCAGTGCCTCTGGAGCCC...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGAGCAGCCCATCCTGCTaGCGGAAGAAGGTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTSSPSC*RKKVGP Trigger: TGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCT...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCATCACTGCTGGGGCTaGGAGGAGACTCTGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAHHCWG*EETLSG Trigger: TCCGGACAGAGTCTCCTCCCAGCCCCAGCAGTGATG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR TCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAATGGACCAGCTCTGCCTaGGATTCCTTCAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQWTSSA*DSFSCC Trigger: GCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCA...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGGGCTCCAGAGGCACTaGCAGAGTGTGCACAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTGLQRH*QSVHNG Trigger: GCCATTGTGCACACTCTGCCAGTGCCTCTGGAGCCC...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAACCATTGCTGGAGTTTTaGGGGCAGTGGCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQPLLEF*GQWLSH Trigger: GTGAGACAGCCACTGCCCCCAAAACTCCAGCAATGG...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTGGCGGAAGAAGGTaGGCCCAGGGACACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTAGGRR*AQGHHD Trigger: ATCATGGTGTCCCTGGGCCCACCTTCTTCCGCCAGC...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGAGCCCGTGCTTTTGCTaGAGGAGGACCGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTSPCFC*RRTGHC Trigger: ACAGTGGCCGGTCCTCCTCCAGCAAAAGCACGGGCT...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGTGGCGCTTCTCTTGCTaGAGCTGGAACACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTWRFSC*SWNTCS Trigger: GCTGCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCA...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCCATTGCTGGAGTTTTaGGGGCAGTGGCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKYTSGNEAVTLELGRTAPLLEF*GQWLSH Trigger: GTGAGACAGCCACTGCCCCCAAAACTCCAGCAATGG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGAACTGGCGCTTCTCTTaGTGCAGCTGGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTNWRFS*CSWNTC Trigger: GCAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTT...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGCCATTGCTGGAGTTTTaGGGGCAGTGGCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CEKYTSGNEAVTLELGRTPLLEF*GQWLSH Trigger: GTGAGACAGCCACTGCCCCCAAAACTCCAGCAATGG...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CCA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAATGTAGGTGGGCAAGCTaGATAAAGAATTTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRNPGTREDGLVTNTNKQCRWAS*IKNFGQ Trigger: CTGGCCGAAATTCTTTATCCAGCTTGCCCACCTACA...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CCA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTGTAGGTGGGCAAGCTaGATAAAGAATTTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYTSGNEAVTLELGRTAWCRWAS*IKNFGQ Trigger: CTGGCCGAAATTCTTTATCCAGCTTGCCCACCTACA...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | CTGTTGGGCCCGCTGGACGCGCTGCGTGGCCTGCTGCGCCTGGGCTaGACAGTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGPLDALRGLLRLG*TVLPSLPWPAPLPC Trigger: GCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCGCGTCCAGCGGGCCCAACAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | AGCAGCTGTTGGGCCCGCTGGACGCGCTGCGTGGCCTGCTGCGCCTaGGCTGCACAGTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCWARWTRCVACCA*AAQSSPRSRGQRRC Trigger: GCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCGCGTCCAGCGGGCCCAACAGCTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 ENSMUST00000237043.2 |
||
| CDS GCA 90 bp | AGCTGCAGCAGCTGTTGGGCCCGCTGGACGCGCTGCGTGGCCTGCTaGGCCTGGGCTGCACAGTCCTCCCCTCGCTCCCGTGGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSSCWARWTRCVAC*AWAAQSSPRSRGQR Trigger: GCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | CGTGGCCTGCTGCGCCTGGGCTGCACAGTCCTCCCCTCGCTCCCGTaGCCAGCGCCGCTGCCGTGCCCCGAATGCCTGACACACTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGLLRLGCTVLPSLP*PAPLPCPECLTHCG Trigger: GCCACAGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCACG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS TCA 90 bp | TGCCCGGCCTTCTCCCGGAGCCGCTCAGCCTCCTGGCGGTACCGCTaGAGCTCCTGCGAGCAGGCCTCCAGCTCCTGCTCCCGAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPAFSRSRSASWRYR*SSCEQASSSCSRAR Trigger: CCGAGCTCGGGAGCAGGAGCTGGAGGCCTGCTCGCAGGAGCTTCAGCGGTACCGCCAGGAGGCTGAGCGGCTCCGGGAGAAGGCCGGGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | GCTGGACCAGGCAGTGCCCCTCGGCCAGGGCCGTGGGAGGGCAGGTaGCCACCTGGGGAGTTGGTGGTTGGCTCGGCACCTCCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGPGSAPRPGPWEGR*PPGELVVGSAPPVL Trigger: CAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGGGGCACTGCCTGGTCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 90 bp | CGTGGCCTGCTGCGCCTGGGCTGCACAGTCCTCCCCTCGCTCCCGTaGCCAGCGCCGCTGCCGTGCCCCGAATGCCTTCTCCAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLLRLGCTVLPSLP*PAPLPCPECLLQLS Trigger: GGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | CCCCTCGGCCAGGGCCGTGGGAGGGCAGGTGCCCACCTGGGGAGTTaGTGGTTGGCTCGGCACCTCCAGTGCTGTAGGTGGGCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGQGRGRAGAHLGS*WLARHLQCCRWASW Trigger: CCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 90 bp | GGGGGTACAGGGGGATCCCGGAGTCCCGATGCTTCGGCATCCAAATaGCCGGCCTTCTCCCGGAGCCGCTCAGCCTCCTGGCGGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGTGGSRSPDASASK*PAFSRSRSASWRYR Trigger: GCGGTACCGCCAGGAGGCTGAGCGGCTCCGGGAGAAGGCCGGGCATTTGGATGCCGAAGCATCGGGACTCCGGGATCCCCCTGTACCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | CGGGTCGGTGGTGGCAGGGGGTACAGGGGGATCCCGGAGTCCCGATaGTTCGGCATCCAAATGCCCGGCCTTCTCCCGGAGCCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGGGRGYRGIPESR*FGIQMPGLLPEPLS Trigger: GCTGAGCGGCTCCGGGAGAAGGCCGGGCATTTGGATGCCGAAGCATCGGGACTCCGGGATCCCCCTGTACCCCCTGCCACCACCGACCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | CAGTTCTTGGCGCAGCCGTTCCACCTGAGCCCGCAGGCTACCCCCTaGCCCAGCCGCTGCCCGCTGCACCTTGGCCTCATCACTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QFLAQPFHLSPQATP*PSRCPLHLGLITLC Trigger: GCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCTGGGGCAGGGGGTAGCCTGCGGGCTCAGGTGGAACGGCTGCGCCAAGAACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | TTCTCTGCCTGCCAGGCCAGCCGCTCCCCCTCAAAGCTGTCCCGTTaGTCGTCCCCTCGCCGCTGCTCCCGCTGCAGTTCTTGGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSACQASRSPSKLSR*SSPRRCSRCSSWRS Trigger: GCTGCGCCAAGAACTGCAGCGGGAGCAGCGGCGAGGGGACGAGCAACGGGACAGCTTTGAGGGGGAGCGGCTGGCCTGGCAGGCAGAGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | GCCTGGGCTGCACAGTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTaGCGTGCCCCGAATGCCTTCTCCAGCTTTCCAGAGACAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AWAAQSSPRSRGQRR*RAPNAFSSFPETGM Trigger: CATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGACCTCAAAGCTGTCCCGTaGCTCGTCCCCTCGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGARAQWIPGQVGLCGSDLKAVP*LVPSPL Trigger: CAGCGGCGAGGGGACGAGCAACGGGACAGCTTTGAG...GTCTGAGCCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS TCA 90 bp | TCCCCTCGCTCCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATGCCTaGCACACTGTGGCCTCACTCTCATCCATACTGTCCCGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPRSRGQRRCRAPNA*HTVASLSSILSRSC Trigger: GCAGCTGCGGGACAGTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 90 bp | GTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATaGCTGACACACTGTGGCCTCACTCTCATCCATACTGTCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLPSLPWPAPLPCPE*LTHCGLTLIHTVPQ Trigger: CTGCGGGACAGTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 90 bp | GTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATaGCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLPSLPWPAPLPCPE*LLQLSRDRDELWWG Trigger: CCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | CTCGGCCAGGGCCGTGGGAGGGCAGGTGCCCACCTGGGGAGTTGGTaGTTGGCTCGGCACCTCCAGTGCTGTAGGTGGGCAAGCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LGQGRGRAGAHLGSW*LARHLQCCRWASWI Trigger: TATCCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 90 bp | TGGCCCGGGCCTCACGGAGGGCCACCCGCAGCGCCACCAGCTCACTaGCCTTCTGGACCAGCTCTGCCTGAGATTCCTTCAGTTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WPGPHGGPPAAPPAH*PSGPALPEIPSVAA Trigger: AGCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGCAGTGAGCTGGTGGCGCTGCGGGTGGCCCTCCGTGAGGCCCGGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | GGCTGCACAGTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTGCCGTaGCCCGAATGCCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCTVLPSLPWPAPLP*PECLLQLSRDRDEL Trigger: AAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | CCTCGTAGCCACCCGGTAGCAGCCCATCCTGCTGGCGGAAGAAGGTaGGCCCAGGGACACCATGATGTCGTTGAGGAGCAGGTCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRSHPVAAHPAGGRR*AQGHHDVVEEQVPR Trigger: CCGGGGGACCTGCTCCTCAACGACATCATGGTGTCCCTGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCTACCGGGTGGCTACGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | AAGGAGCCCGTGCTTTTGCTGGAGGAGGACCGGCCACTGTCTGAATaGGAGGGCCCAGTAGGGACCCCTCGGGCTGGACCAGGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KEPVLLLEEDRPLSE*EGPVGTPRAGPGSA Trigger: GGCACTGCCTGGTCCAGCCCGAGGGGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCCTCCTCCAGCAAAAGCACGGGCTCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 90 bp | CCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATGCCTGACACACTGTaGCCTCACTCTCATCCATACTGTCCCGCAGCTGCTGCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVASAAAVPRMPDTL*PHSHPYCPAAAAAL Trigger: CAGAGCTGCAGCAGCTGCGGGACAGTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 90 bp | TCTCCTCCAGCCGTGGCCCGAGTTCCCGCTGCTCCCGTTCAAAAGTaGCACAGCGGCGCTCCAGCTGTTCCCGCTCCTGTAGCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPAVARVPAAPVQK*HSGAPAVPAPVAAG Trigger: CCCAGCTGCTACAGGAGCGGGAACAGCTGGAGCGCCGCTGTGCCACTTTTGAACGGGAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CCA 90 bp | GCACCTTGGCCTCATCACTCTCTGCCAGGAGGAACGGGTCGGTGGTaGCAGGGGGTACAGGGGGATCCCGGAGTCCCGATGCTTCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: APWPHHSLPGGTGRW*QGVQGDPGVPMLRH Trigger: ATGCCGAAGCATCGGGACTCCGGGATCCCCCTGTACCCCCTGCCACCACCGACCCGTTCCTCCTGGCAGAGAGTGATGAGGCCAAGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGTGCTCACGCTGCCCATaGCTGGAGTTTTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SETWSACSVDPRAGGPLWCSRCP*LEFWGQ Trigger: CTGCCCCCAAAACTCCAGCAATGGGCAGCGTGAGCA...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCATGCTCACGCTGCCCATaGCTGGAGTTTTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPALPLHVDMLRAGTSGACSRCP*LEFWGQ Trigger: CTGCCCCCAAAACTCCAGCAATGGGCAGCGTGAGCA...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCCAACTGGCGCTTCTCTaGCTGCAGCTGGAACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGRGPLALRPGARAQWIPQLALL*LQLEHL Trigger: CAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTG...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGCAACTGGCGCTTCTCTaGCTGCAGCTGGAACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPLALRPGARAQWIPGQQLALL*LQLEHL Trigger: CAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTG...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGCTCAAAGCTGTCCCGTaGCTCGTCCCCTCGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPLKAVP*LVPSPL Trigger: CAGCGGCGAGGGGACGAGCAACGGGACAGCTTTGAG...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CCA 90 bp | TGCTCGTCCCAGCGGCGCTCCAGCTGTTCCCGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAACTGGCGCTTCTCTTGCTGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSQRRSSCSRSCSS*AKSSCNWRFSCCSW Trigger: CCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCGGGAACAGCTGGAGCGCCGCTGGGACGAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGTGCTCACGCTGCCCATaGCTGGAGTTTTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGCPRALSGFRQVDAETGCSRCP*LEFWGQ Trigger: CTGCCCCCAAAACTCCAGCAATGGGCAGCGTGAGCA...CCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTTTGGGTAGCACTGGCTaGAAGGCTGTTGGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RPFGSETWSACSVDPRAGLGSTG*KAVGRI Trigger: GATCCGGCCAACAGCCTTCAAGCCAGTGCTACCCAA...ACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGGTGGGCCTCTGTGGCTCAGTGCCAAGGGTTaGTCAGCAGCAGAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SETWSACSVDPRAGGPLWLSAKG*SAAEEE Trigger: TTCCTCCTCTGCTGCTGACAAACCCTTGGCACTGAG...CCACAGAGGCCCACCTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | CGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCGGGCAGCTCAGTGCCAAGGGTTaGTCAGCAGCAGAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGPLALRPGARAQWIPGQLSAKG*SAAEEE Trigger: TTCCTCCTCTGCTGCTGACAAACCCTTGGCACTGAG...CTGCCCGGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGCCGAGGCCCTTTGGCTCTGAGACCTGGAGCGCGTGCTCAGTGGATCCCCCTCAGTGCCAAGGGTTaGTCAGCAGCAGAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGRGPLALRPGARAQWIPLSAKG*SAAEEE Trigger: TTCCTCCTCTGCTGCTGACAAACCCTTGGCACTGAG...GGGGATCCACTGAGCACGCGCTCCAGGTCTCAGAGCCAAAGGGCCTCGGCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGGAGCAGCTGGTTGCCCTCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCCTGGGGAGTTGGTGGTaGGCTCGGCACCTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWSSWLPSGSLWLQAGRCLGSWW*ARHLQC Trigger: GCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAG...GCATCTACCTGCCTGAAGCCAGAGAGAGCCCGAGGGCAACCAGCTGCTCCAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS TCA 90 bp | GCTGCCGTGCCCCGAATGCCTTCTCCAGCTTTCCAGAGACAGGGATaGGCTTTGGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AAVPRMPSPAFQRQG*ALVGAHGGGHCVPD Trigger: ATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | CCCGAATGCCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTaGGGGCCCACGGAGGTGGGCATTGTGTGCCTGATGTTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PECLLQLSRDRDELW*GPTEVGIVCLMFPG Trigger: CCCCGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCAGCCCCATGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCTGAGATTCCTTCAGTaGCTGCTTCAGCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GISPMPGPAPPRGHVEGRLRFLQ*LLQQGD Trigger: ATCTCCCTGCTGAAGCAGCAACTGAAGGAATCTCAG...CCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCATGGGGCTGATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CCA 90 bp | AAAGTGGCACAGCGGCGCTCCAGCTGTTCCCGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAACTGGCGCTTCTCTTGCTGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVAQRRSSCSRSCSS*AKSSCNWRFSCCSW Trigger: CCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCGGGAACAGCTGGAGCGCCGCTGTGCCACTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CCA 90 bp | TGCCCCGAATGCCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTGATGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPECLLQLSRDRDEL*WGPTEVGIVCLMFP Trigger: CGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGCTCTCTCTGGCTTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTGCTCACGCTGCCCATaGCTGGAGTTTTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSLWLQAGRCGDREAASCSRCP*LEFWGQ Trigger: CTGCCCCCAAAACTCCAGCAATGGGCAGCGTGAGCA...AGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAAGCCAGAGAGAGCCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCCCAGAAGAGGCTTGCAGAGCTCAACATGGGGATCAGCCCCATGCCCGTTGGGTAGCACTGGCTaGAAGGCTGTTGGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PQPRRGLQSSTWGSAPCPLGSTG*KAVGRI Trigger: GATCCGGCCAACAGCCTTCAAGCCAGTGCTACCCAA...CGGGCATGGGGCTGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 90 bp | GCAGGTGCCCACCTGGGGAGTTGGTGGTTGGCTCGGCACCTCCAGTaGTGTAGGTGGGCAAGCTGGATAAAGAATTTCGGCCAGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGAHLGSWWLARHLQ*CRWASWIKNFGQSL Trigger: CAGACTCTGGCCGAAATTCTTTATCCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGCCCTGCCCCTCCACGTGGACATGTTGAGGGCAGGCACATCTGGAGCACTGAGATTCCTTCAGTaGCTGCTTCAGCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CPALPLHVDMLRAGTSGALRFLQ*LLQQGD Trigger: ATCTCCCTGCTGAAGCAGCAACTGAAGGAATCTCAG...TGCTCCAGATGTGCCTGCCCTCAACATGTCCACGTGGAGGGGCAGGGCCGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CCA 90 bp | CTCCATATTCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTaGGGGCCCACGGAGGTGGGCATTGTGTGCCTGATGTTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHILLQLSRDRDELW*GPTEVGIVCLMFPG Trigger: CCCCGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAATATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGCAGGTAGATGCGGAGACAGGGAAGCAGCCTCTTTCCCTTCCCAGCTGGCAACTGGCGCTTCTCTaGCTGCAGCTGGAACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRQVDAETGKQPLSLPSWQLALL*LQLEHL Trigger: CAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTG...CCAGCTGGGAAGGGAAAGAGGCTGCTTCCCTGTCTCCGCATCTACCTGCCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | AGACTCTGTCCGGAAGTCCTCATTGACATAGGTAAAGCTATTGCCTaGGACAGCCTTCCTCGGTGGCACAGCCGGGCAGAGCGGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLCPEVLIDIGKAIA*DSLPRWHSRAERFL Trigger: CAGGAACCGCTCTGCCCGGCTGTGCCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACCTATGTCAATGAGGACTTCCGGACAGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CCA 90 bp | AAGAATTTCGGCCAGAGTCTGACAGCGTTCCTGAAGGGCAGCCACTaGCCCAACCACTCAGTGCCAAGGGTTTGTCAGCAGCAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNFGQSLTAFLKGSH*PNHSVPRVCQQQRR Trigger: CCTCCTCTGCTGCTGACAAACCCTTGGCACTGAGTGGTTGGGCCAGTGGCTGCCCTTCAGGAACGCTGTCAGACTCTGGCCGAAATTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 90 bp | CTTCTCCATATTCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTGATGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLHILLQLSRDRDEL*WGPTEVGIVCLMFP Trigger: CGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAATATGGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | AAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGCTGGGGAGTTGGTGGTaGGCTCGGCACCTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KYTSGNEAVTLELGRTAWLGSWW*ARHLQC Trigger: GCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAG...CCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAAGACACCATGATGTCGTaGAGGAGCAGGTCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRNPGTREDGLVTNTNKQDTMMS*RSRSPG Trigger: CCCGGGGGACCTGCTCCTCAACGACATCATGGTGTC...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS TCA 90 bp | TCAGGATCTTCTCCATATTCTTCTCCAGCTTTCCAGAGACAGGGATaGGCTTTGGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGSSPYSSPAFQRQG*ALVGAHGGGHCVPD Trigger: ATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAATATGGAGAAGATCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | TGTGAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGCTCAAAGCTGTCCCGTaGCTCGTCCCCTCGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CEKYTSGNEAVTLELGRTLKAVP*LVPSPL Trigger: CAGCGGCGAGGGGACGAGCAACGGGACAGCTTTGAG...CGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | GGCCGTAACCCTGGAACTAGGGAGGACGGCTTGGTCACAAACACAAATAAACAACAACTGGCGCTTCTCTaGCTGCAGCTGGAACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRNPGTREDGLVTNTNKQQLALL*LQLEHL Trigger: CAGGTGTTCCAGCTGCAGCAAGAGAAGCGCCAGTTG...TTGTTTATTTGTGTTTGTGACCAAGCCGTCCTCCCTAGTTCCAGGGTTACGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTTTGGGTAGCACTGGCTaGAAGGCTGTTGGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: EKYTSGNEAVTLELGRTALGSTG*KAVGRI Trigger: GATCCGGCCAACAGCCTTCAAGCCAGTGCTACCCAA...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS-3UTR CAA 90 bp | GAAAAATATACAAGTGGAAATGAGGCCGTAACCCTGGAACTAGGGAGGACGGCTCTGAGATTCCTTCAGTaGCTGCTTCAGCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EKYTSGNEAVTLELGRTALRFLQ*LLQQGD Trigger: ATCTCCCTGCTGAAGCAGCAACTGAAGGAATCTCAG...AGCCGTCCTCCCTAGTTCCAGGGTTACGGCCTCATTTCCACTTGTATATTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS TCA 72 bp | GGGCTGCCTCCTGCAGGCCCCTGGCACGGCCCTCACTaGCCCGCAAGGTGGCCCGGGCCTCACGGAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLPPAGPWHGPH*PARWPGPHGGP Trigger: TGGCCCTCCGTGAGGCCCGGGCCACCTTGCGGGTCAGTGAGGGCCGTGCCAGGGGCCTGCAGGAGGCAGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 72 bp | AGCAGCTGTTGGGCCCGCTGGACGCGCTGCGTGGCCTaGTGCGCCTGGGCTGCACAGTCCTCCCCTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCWARWTRCVA*CAWAAQSSPRS Trigger: GGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAGCAGGCCACGCAGCGCGTCCAGCGGGCCCAACAGCTGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | CTGCGCCTGGGCTGCACAGTCCTCCCCTCGCTCCCGTaGCCAGCGCCGCTGCCGTGCCCCGAATGCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLGCTVLPSLP*PAPLPCPECLL Trigger: GAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGCAGCCCAGGCGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS GCA 72 bp | GTGGAGGGGGTGGAGAGCGGTCTCCACCAGAACTGCTaGCAGGGGAGGCCCGGGCACCACTGCCCAAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VEGVESGLHQNC*QGRPGHHCPRA Trigger: GGCTCTTGGGCAGTGGTGCCCGGGCCTCCCCTGGCAGCAGTTCTGGTGGAGACCGCTCTCCACCCCCTCCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 72 bp | GGGGGATCCCGGAGTCCCGATGCTTCGGCATCCAAATaGCCGGCCTTCTCCCGGAGCCGCTCAGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSRSPDASASK*PAFSRSRSASW Trigger: CCAGGAGGCTGAGCGGCTCCGGGAGAAGGCCGGGCATTTGGATGCCGAAGCATCGGGACTCCGGGATCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 72 bp | GTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTGCCGTaGCCCGAATGCCTTCTCCAGCTTTCCAGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLPSLPWPAPLP*PECLLQLSRDR Trigger: CCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS GCA 72 bp | GCACAGTCCTCCCCTCGCTCCCGTGGCCAGCGCCGCTaGCGTGCCCCGAATGCCTTCTCCAGCTTTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AQSSPRSRGQRR*RAPNAFSSFPE Trigger: CTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGAGGGGAGGACTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | CAGGGCCGTGGGAGGGCAGGTGCCCACCTGGGGAGTTaGTGGTTGGCTCGGCACCTCCAGTGCTGTAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGRGRAGAHLGS*WLARHLQCCRW Trigger: CCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 72 bp | GGTGGCAGGGGGTACAGGGGGATCCCGGAGTCCCGATaGTTCGGCATCCAAATGCCCGGCCTTCTCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGRGYRGIPESR*FGIQMPGLLPE Trigger: CTCCGGGAGAAGGCCGGGCATTTGGATGCCGAAGCATCGGGACTCCGGGATCCCCCTGTACCCCCTGCCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 72 bp | AGCCGCTGCCCGCTGCACCTTGGCCTCATCACTCTCTaGCAGGAGGAACGGGTCGGTGGTGGCAGGGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SRCPLHLGLITL*QEERVGGGRGY Trigger: GTACCCCCTGCCACCACCGACCCGTTCCTCCTGGCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 72 bp | CCCTCAAAGCTGTCCCGTTGCTCGTCCCCTCGCCGCTaGTCCCGCTGCAGTTCTTGGCGCAGCCGTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PSKLSRCSSPRR*SRCSSWRSRST Trigger: GGTGGAACGGCTGCGCCAAGAACTGCAGCGGGAGCAGCGGCGAGGGGACGAGCAACGGGACAGCTTTGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 72 bp | TCCGCAAGCTCGCGGGCCTCCAGCTCCAGGCTCAGTTaGTGCAGTTCCTGCTCCAGCTGCCGGTTACGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASSRASSSRLS*CSSCSSCRLRR Trigger: CCGGCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACTGAGCCTGGAGCTGGAGGCCCGCGAGCTTGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CAA 72 bp | CGTGGGAGGGCAGGTGCCCACCTGGGGAGTTGGTGGTaGGCTCGGCACCTCCAGTGCTGTAGGTGGGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRAGAHLGSWW*ARHLQCCRWAS Trigger: GCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CAA 90 bp | GGCCAGGGCCGTGGGAGGGCAGGTGCCCACCTGGGGAGTTGGTGGTaGGCTCGGCACCTCCAGTGCTGTAGGTGGGCAAGCTGGATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GQGRGRAGAHLGSWW*ARHLQCCRWASWIK Trigger: CTTTATCCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCACGGCCCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 72 bp | GCAAGCTCGCGGGCCTCCAGCTCCAGGCTCAGTTGCTaGAGTTCCTGCTCCAGCTGCCGGTTACGCCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSRASSSRLSC*SSCSSCRLRRY Trigger: GTACCGGCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACTGAGCCTGGAGCTGGAGGCCCGCGAGCTTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | GTGGGAGGGCAGGTGCCCACCTGGGGAGTTGGTGGTTaGCTCGGCACCTCCAGTGCTGTAGGTGGGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VGGQVPTWGVGG*LGTSSAVGGQA Trigger: AGCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTGGGCACCTGCCCTCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 72 bp | GCCGTGGCCCGAGTTCCCGCTGCTCCCGTTCAAAAGTaGCACAGCGGCGCTCCAGCTGTTCCCGCTCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVARVPAAPVQK*HSGAPAVPAPV Trigger: TACAGGAGCGGGAACAGCTGGAGCGCCGCTGTGCCACTTTTGAACGGGAGCAGCGGGAACTCGGGCCACGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CAA 72 bp | ATCCGCAAGCTCGCGGGCCTCCAGCTCCAGGCTCAGTaGCTGCAGTTCCTGCTCCAGCTGCCGGTTACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IRKLAGLQLQAQ*LQFLLQLPVTP Trigger: CGGCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACTGAGCCTGGAGCTGGAGGCCCGCGAGCTTGCGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS TCA 72 bp | TCGTTGAGGAGCAGGTCCCCCGGGGCAGGGCCGGCCTaGGATAAGACTGCTCACGCTGCCCATTGCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLRSRSPGAGPA*DKTAHAAHCWS Trigger: ACTCCAGCAATGGGCAGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCCGGGGGACCTGCTCCTCAACGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS TCA 72 bp | TCCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATGCCTaGCACACTGTGGCCTCACTCTCATCCATACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGQRRCRAPNA*HTVASLSSILS Trigger: GGACAGTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 72 bp | TCGCTCCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATaGCTGACACACTGTGGCCTCACTCTCATCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: SLPWPAPLPCPE*LTHCGLTLIHT Trigger: AGTATGGATGAGAGTGAGGCCACAGTGTGTCAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 72 bp | CATTTGGTCTCCTCCAGCCGTGGCCCGAGTTCCCGCTaGTCCCGTTCAAAAGTGGCACAGCGGCGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLVSSSRGPSSR*SRSKVAQRRSS Trigger: GCTGGAGCGCCGCTGTGCCACTTTTGAACGGGAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACCAAATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS GCA 72 bp | TCGCTCCCGTGGCCAGCGCCGCTGCCGTGCCCCGAATaGCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLPWPAPLPCPE*LLQLSRDRDEL Trigger: AAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCATTCGGGGCACGGCAGCGGCGCTGGCCACGGGAGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | GTGCTTTTGCTGGAGGAGGACCGGCCACTGTCTGAATaGGAGGGCCCAGTAGGGACCCCTCGGGCTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: VLLLEEDRPLSE*EGPVGTPRAGP Trigger: TGGTCCAGCCCGAGGGGTCCCTACTGGGCCCTCCCATTCAGACAGTGGCCGGTCCTCCTCCAGCAAAAGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CAA 90 bp | GGCCGGCCTGAGATAAGACTGCTCACGCTGCCCATTGCTGGAGTTTaGGGGGCAGTGGCTGTCTCACGTGCGGGCTCCAGAGGCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRPEIRLLTLPIAGV*GAVAVSRAGSRGTG Trigger: GCCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACTGCCCCCAAAACTCCAGCAATGGGCAGCGTGAGCAGTCTTATCTCAGGCCGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 ENSMUST00000237148.2 ENSMUST00000237396.2 |
||
| CDS CCA 72 bp | TGCTCACGCTGCCCATTGCTGGAGTTTTGGGGGCAGTaGCTGTCTCACGTGCGGGCTCCAGAGGCACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSRCPLLEFWGQ*LSHVRAPEALA Trigger: TGCCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACTGCCCCCAAAACTCCAGCAATGGGCAGCGTGAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 ENSMUST00000237148.2 ENSMUST00000237396.2 |
||
| CDS CCA 72 bp | CACCCGGTAGCAGCCCATCCTGCTGGCGGAAGAAGGTaGGCCCAGGGACACCATGATGTCGTTGAGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPVAAHPAGGRR*AQGHHDVVEEQ Trigger: CTGCTCCTCAACGACATCATGGTGTCCCTGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCTACCGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS GCA 72 bp | GTGGCCTCACTCTCATCCATACTGTCCCGCAGCTGCTaGAGCTCTGCCTCGCGGTCTCTGAGCTTCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VASLSSILSRSC*SSASRSLSFPS Trigger: GGAAGGGAAGCTCAGAGACCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAGTATGGATGAGAGTGAGGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 72 bp | CAGCGGCGCTCCAGCTGTTCCCGCTCCTGTAGCAGCTaGGCAAAGTCATCCTGCAACTGGCGCTTCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRRSSCSRSCSS*AKSSCNWRFSC Trigger: GCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCGGGAACAGCTGGAGCGCCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS TCA 72 bp | TTTGGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTaGTGTTCCCGGGGATCTTCAACATCACTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FGGGPRRWALCA*CSRGSSTSLLG Trigger: CCCCAGCAGTGATGTTGAAGATCCCCGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS GCA 72 bp | ACTGTGGCCTCACTCTCATCCATACTGTCCCGCAGCTaGTGCAGCTCTGCCTCGCGGTCTCTGAGCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TVASLSSILSRS*CSSASRSLSFP Trigger: AGGGAAGCTCAGAGACCGCGAGGCAGAGCTGCAGCAGCTGCGGGACAGTATGGATGAGAGTGAGGCCACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 72 bp | TGCCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLLQLSRDRDEL*WGPTEVGIVCL Trigger: CAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | ATAGGTAAAGCTATTGCCTGGGACAGCCTTCCTCGGTaGCACAGCCGGGCAGAGCGGTTCCTGTGCCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: IGKAIAWDSLPR*HSRAERFLCLV Trigger: TACGAGGCACAGGAACCGCTCTGCCCGGCTGTGCCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | CTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTaGGGGCCCACGGAGGTGGGCATTGTGTGCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLSRDRDELW*GPTEVGIVCLM Trigger: CATCAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS CCA 72 bp | TTTCTGACACACCTCCCATTTGGTCTCCTCCAGCCGTaGCCCGAGTTCCCGCTGCTCCCGTTCAAAAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLTHLPFGLLQP*PEFPLLPFKSG Trigger: GCCACTTTTGAACGGGAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACCAAATGGGAGGTGTGTCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||
| CDS CAA 90 bp | GTTCCTGAAGGGCAGCCACTGGCCCAACCACTCAGTGCCAAGGGTTaGTCAGCAGCAGAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VPEGQPLAQPLSAKG*SAAEEEEEEEEEEA Trigger: AGCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCTGCTGCTGACAAACCCTTGGCACTGAGTGGTTGGGCCAGTGGCTGCCCTTCAGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS GCA 72 bp | TGTGTGCCTGATGTTCCCGGGGATCTTCAACATCACTaGTGGGGCTGGGAGGAGACTCTGTCCGGAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CVPDVPGDLQHH*WGWEETLSGSP Trigger: AGGACTTCCGGACAGAGTCTCCTCCCAGCCCCAGCAGTGATGTTGAAGATCCCCGGGAACATCAGGCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000237043.2 |
||
| CDS GCA 72 bp | CACCTGGGGAGTTGGTGGTTGGCTCGGCACCTCCAGTaGTGTAGGTGGGCAAGCTGGATAAAGAATTTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: HLGSWWLARHLQ*CRWASWIKNFG Trigger: GCCGAAATTCTTTATCCAGCTTGCCCACCTACAGCACTGGAGGTGCCGAGCCAACCACCAACTCCCCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 ENSMUST00000236377.2 |
||
| CDS CCA 72 bp | ATTCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGGGGCCCACGGAGGTGGGCATTGTGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILLQLSRDRDEL*WGPTEVGIVCL Trigger: CAGGCACACAATGCCCACCTCCGTGGGCCCCCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039016.14 ENSMUST00000178087.3 ENSMUST00000179108.9 |
||