Pregenerated sensors for LZTFL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025245Ensembl transcript IDs: ENSMUST00000026274.14, ENSMUST00000098258.10, ENSMUST00000163207.2, ENSMUST00000165754.8, ENSMUST00000166097.8, ENSMUST00000168921.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCCTCCATTGCTGCAGAAACCCCAGGACAAACAGCAGCAACCTaGGTCATGCAAACCCTCTGCTGGGTTGTTGGGAGATGTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: HSSIAAETPGQTAAT*VMQTLCWVVGRCPK Trigger: CTTAGGACATCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTGCTGTTTGTCCTGGGGTTTCTGCAGCAATGGAGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR GCA 90 bp | CCATTGCTGCAGAAACCCCAGGACAAACAGCAGCAACCTGAGTCATaGAAACCCTCTGCTGGGTTGTTGGGAGATGTCCTAAGAGATACA | + |
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Preference number: 1 (lower is better) Translates to: PLLQKPQDKQQQPES*KPSAGLLGDVLRDT Trigger: TGTATCTCTTAGGACATCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTGCTGTTTGTCCTGGGGTTTCTGCAGCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR GCA 90 bp | CTGCACAGCTCTCAAAGTGCAGATGGCAGAAGGCTGGCTGTCAATTaGTACTGTAGCAGTTGTAGGTTGTATTCCTTAGTTCCTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LHSSQSADGRRLAVN*YCSSCRLYSLVPER Trigger: CCTCTCAGGAACTAAGGAATACAACCTACAACTGCTACAGTAGCAATTGACAGCCAGCCTTCTGCCATCTGCACTTTGAGAGCTGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR TCA 90 bp | TCTTCTCTAACTCCTTTTCAGCCATGCTCAGCTGCTCCTGTACTCTaGGGAGGTCATGTTTGGCTGCTGCTAGGTTCTCTTCCAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: SSLTPFQPCSAAPVL*GGHVWLLLGSLPKI Trigger: AATCTTTGGAAGAGAACCTAGCAGCAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGCTGAGCATGGCTGAAAAGGAGTTAGAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
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| 3UTR TCA 90 bp | CAACAGAACGGCTATAGACCCTGGGAAGAGAACACACACTGTGCCTaGCAGAACATTTTTATATCTGGGGTGACTGCTGTTGGCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: QQNGYRPWEENTHCA*QNIFISGVTAVGYS Trigger: ACTGTAGCCAACAGCAGTCACCCCAGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTTCTCTTCCCAGGGTCTATAGCCGTTCTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR GCA 90 bp | ATGCAACAGGGAAGTCTTGAGGTTTCCAAGATGCAGCAGATCCTATaGACTTCACTCTTAAGGAAGAGTGCCTTAAGCCCTCAGCATGGA | + |
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Preference number: 1 (lower is better) Translates to: MQQGSLEVSKMQQIL*TSLLRKSALSPQHG Trigger: TCCATGCTGAGGGCTTAAGGCACTCTTCCTTAAGAGTGAAGTGCATAGGATCTGCTGCATCTTGGAAACCTCAAGACTTCCCTGTTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR CCA 90 bp | GAGCACATTGGAAGCCTCCCAAGAGGAAAGGATATGAGTGGGAGATaGCTTCAGATAGCTTCCCATACTTCTATGCTTTGGGAGAATCAG | + |
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Preference number: 1 (lower is better) Translates to: EHIGSLPRGKDMSGR*LQIASHTSMLWENQ Trigger: CTGATTCTCCCAAAGCATAGAAGTATGGGAAGCTATCTGAAGCCATCTCCCACTCATATCCTTTCCTCTTGGGAGGCTTCCAATGTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR GCA 90 bp | ATAACTGAATTCACACCGTACACTTTGAAGACACTCCTCCATTGCTaGAGAAACCCCAGGACAAACAGCAGCAACCTGAGTCATGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: ITEFTPYTLKTLLHC*RNPRTNSSNLSHAN Trigger: GTTTGCATGACTCAGGTTGCTGCTGTTTGTCCTGGGGTTTCTGCAGCAATGGAGGAGTGTCTTCAAAGTGTACGGTGTGAATTCAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR GCA 90 bp | AATTATGTTGGGCTAAAGAAACACAGGGTGAAAGTGCATCCTCAATaGAAGCCCTACGTGAAACTGAAGAGCGGTCCAACTGCAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: NYVGLKKHRVKVHPQ*KPYVKLKSGPTANK Trigger: TTTGTTTGCAGTTGGACCGCTCTTCAGTTTCACGTAGGGCTTGCATTGAGGATGCACTTTCACCCTGTGTTTCTTTAGCCCAACATAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR CCA 90 bp | AAAACATCCTGGTCCACAAATGGAATTTCAGAGAGGGAATTATGTTaGGCTAAAGAAACACAGGGTGAAAGTGCATCCTCAATGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: KTSWSTNGISERELC*AKETQGESASSMQA Trigger: GGCTTGCATTGAGGATGCACTTTCACCCTGTGTTTCTTTAGCCCAACATAATTCCCTCTCTGAAATTCCATTTGTGGACCAGGATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR CCA 90 bp | CCTATGCACTTCACTCTTAAGGAAGAGTGCCTTAAGCCCTCAGCATaGATGTACAGTAATCCTAATAAGCTTGTTTGTTTTCCAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: PMHFTLKEECLKPSA*MYSNPNKLVCFPRP Trigger: TGGCCTTGGAAAACAAACAAGCTTATTAGGATTACTGTACATCCATGCTGAGGGCTTAAGGCACTCTTCCTTAAGAGTGAAGTGCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR TCA 90 bp | AGGCCTCATAGTAAGTATTTTTATATTTTACACGCCAATCTATTCTaGGCACATTGGAAGCCTCCCAAGAGGAAAGGATATGAGTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RPHSKYFYILHANLF*AHWKPPKRKGYEWE Trigger: CTCCCACTCATATCCTTTCCTCTTGGGAGGCTTCCAATGTGCTCAGAATAGATTGGCGTGTAAAATATAAAAATACTTACTATGAGGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR CCA 90 bp | CAATGTATTACATGTGGTGCAGTGTCTTACCAAGTCTTTTCTTCCTaGCCTTCAACTGAGAAAGGTGGAGGGAGAATACAATTAAACCAT | + |
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Preference number: 1 (lower is better) Translates to: QCITCGAVSYQVFSS*PSTEKGGGRIQLNH Trigger: ATGGTTTAATTGTATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAAGAAAAGACTTGGTAAGACACTGCACCACATGTAATACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR TCA 90 bp | AACAGGCAGGATAACAACAGCAACAGTTGTGAGATGCTGTTTCACTaGGAGACCAAGGCTAGGCCTCATAGTAAGTATTTTTATATTTTA | + |
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Preference number: 1 (lower is better) Translates to: NRQDNNSNSCEMLFH*ETKARPHSKYFYIL Trigger: TAAAATATAAAAATACTTACTATGAGGCCTAGCCTTGGTCTCTCAGTGAAACAGCATCTCACAACTGTTGCTGTTGTTATCCTGCCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR TCA 90 bp | CCATTTCTCAGACACATTTTCCACTTAGTTACAAGGTTTGGTTTCTaGCTTATTCAAAACATCCTGGTCCACAAATGGAATTTCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: PFLRHIFHLVTRFGF*LIQNILVHKWNFRE Trigger: CTCTCTGAAATTCCATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAGTGGAAAATGTGTCTGAGAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR CCA 90 bp | CCAATTTTGACTTCTCATCCAGAGCATTTACAGCCTGTATTTCAATaGTCTTCAGCCTTGACTTTAGTTTTTCATTCTCTTGTTGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: PILTSHPEHLQPVFQ*SSALTLVFHSLVEV Trigger: GACTTCAACAAGAGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTGAAATACAGGCTGTAAATGCTCTGGATGAGAAGTCAAAATTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | CATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCCTTGGGACTGAGACAGGGGCACAGTaGTTACGCAGTACATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HEPRCLQKSEEGVRSLGTETGAQ*LRSTCC Trigger: ACAGCATGTACTGCGTAATCACTGTGCCCCTGTCTC...AGTCCCAAGGGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCTTCCTGGCCTTCAACTaGGAAAGGTGGAGGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSFLAFN*ERWREN Trigger: ATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAA...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTGCTGCTCCTGTACTCTaGGGAGGTCATGTTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGAAPVL*GGHVWL Trigger: CAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGC...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCACTCTTAAGGAAGAGTaGCTTAAGCCCTCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSTLKEE*LKPSAW Trigger: CCATGCTGAGGGCTTAAGGCACTCTTCCTTAAGAGT...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCGACCTAGTGGCAATATaGAAGATATCAAGGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSDLVAI*KISRPS Trigger: GGATGGCCTTGATATCTTTCATATTGCCACTAGGTC...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGAAAAAAGGAGAATCAGTaGCACACGAGACAGGTACGA | + |
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Preference number: 2 (lower is better) Translates to: VLAPHEPRCLQKSEEGVRKKENQ*HTRQVR Trigger: TCGTACCTGTCTCGTGTGGCACTGATTCTCCTTTTT...TCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAAGAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR CAA 90 bp | GACAAACAGCAGCAACCTGAGTCATGCAAACCCTCTGCTGGGTTGTaGGGAGATGTCCTAAGAGATACAGACACAGTTGCTCATTATCCC | + |
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Preference number: 2 (lower is better) Translates to: DKQQQPESCKPSAGL*GDVLRDTDTVAHYP Trigger: GGGATAATGAGCAACTGTGTCTGTATCTCTTAGGACATCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTGCTGTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTCCTGGCCTTCAACTaGGAAAGGTGGAGGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGFLAFN*ERWREN Trigger: ATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAA...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTATTGTGTGGGTTCTaGTCCCAGAGCCCTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGLLCGF*SQSPVH Trigger: ATGCACAGGGCTCTGGGATCAGAACCCACACAATAA...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCCAAGTCTTTTCTTCCTaGCCTTCAACTGAGAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSQVFSS*PSTEKG Trigger: ACCTTTCTCAGTTGAAGGCCAGGAAGAAAAGACTTG...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGAAACTGCTGTCTACCATaGAGAAATCTCACTGTACTT | + |
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Preference number: 2 (lower is better) Translates to: VLAPHEPRCLQKSEEGVRNCCLP*RNLTVL Trigger: AAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTT...TCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTATTATTGTGTGGGTTCTaGTCCCAGAGCCCTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LGTRVSDGCEPSSRSLELLLCGF*SQSPVH Trigger: ATGCACAGGGCTCTGGGATCAGAACCCACACAATAA...TAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCGCAATGTATTACATGTaGTGCAGTGTCTTACCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSAMYYM*CSVLPS Trigger: ACTTGGTAAGACACTGCACCACATGTAATACATTGC...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCTTTTATTTTATTGTGTaGGTTCTGATCCCAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSFYFIV*VLIPEP Trigger: GGGCTCTGGGATCAGAACCCACACAATAAAATAAAA...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTAAAGTGCATCCTCAATaGAAGCCCTACGTGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGKVHPQ*KPYVKL Trigger: CAGTTTCACGTAGGGCTTGCATTGAGGATGCACTTT...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTAAAAAGGAGAATCAGTaGCACACGAGACAGGTACGA | + |
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Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGKKENQ*HTRQVR Trigger: TCGTACCTGTCTCGTGTGGCACTGATTCTCCTTTTT...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGACCCTGGGAAGAGAACACACACTGTGCCTGACAGAACATTTTTATATCTGATGAGCCCCGGTGCTTaGAGAAGTCAGAAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: IDPGKRTHTVPDRTFLYLMSPGA*RSQKKV Trigger: CACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCAT...CAGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTTCTCTTCCCAGGGTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATTGTATGTTCATGTGTaGCAGGTTCTAGACAAAATC | + |
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Preference number: 2 (lower is better) Translates to: VLAPHEPRCLQKSEEGVRLYVHV*QVLDKI Trigger: GATTTTGTCTAGAACCTGCCACACATGAACATACAA...TCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCCTGGGAAGAGAACACACACTGTGCCTGACAGAACATTTTTATATCTGTTCCTGGCCTTCAACTaGGAAAGGTGGAGGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: IDPGKRTHTVPDRTFLYLFLAFN*ERWREN Trigger: ATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAA...CAGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTTCTCTTCCCAGGGTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAAAAGTGCATCCTCAATaGAAGCCCTACGTGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: LGTRVSDGCEPSSRSLELKVHPQ*KPYVKL Trigger: CAGTTTCACGTAGGGCTTGCATTGAGGATGCACTTT...TAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGACCCTGGGAAGAGAACACACACTGTGCCTGACAGAACATTTTTATATCTGCTCTCAAAGTGCAGATaGCAGAAGGCTGGCTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: IDPGKRTHTVPDRTFLYLLSKCR*QKAGCQ Trigger: TTGACAGCCAGCCTTCTGCCATCTGCACTTTGAGAG...CAGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTTCTCTTCCCAGGGTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTAACTGCTGTCTACCATaGAGAAATCTCACTGTACTT | + |
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Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGNCCLP*RNLTVL Trigger: AAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTT...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTATATTTTACACGCCAATCTATTCTGAGCACATTGGAAGCCTCCCAAGATGTCTTAGCACCACATaGGCCCCGGTGCTTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IFIFYTPIYSEHIGSLPRCLSTT*APVLAE Trigger: TTCTGCAAGCACCGGGGCTCATGTGGTGCTAAGACA...TCTTGGGAGGCTTCCAATGTGCTCAGAATAGATTGGCGTGTAAAATATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCTTAGAGACTCCTTTTCAGCCATaGTCAGCTGCTCCTGTACTC | + |
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Preference number: 2 (lower is better) Translates to: SSLGINSLLVEMEKSLLETPFQP*SAAPVL Trigger: GAGTACAGGAGCAGCTGAGCATGGCTGAAAAGGAGT...CTCTAAGAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGAGAGGGAATTATGTTaGGCTAAAGAAACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LGTRVSDGCEPSSRSLELERELC*AKETQG Trigger: ACCCTGTGTTTCTTTAGCCCAACATAATTCCCTCTC...TAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTATATTTTACACGCCAATCTATTCTGAGCACATTGGAAGCCTCCCAAGAGAGACAGGGGCACAGTaGTTACGCAGTACATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: IFIFYTPIYSEHIGSLPRETGAQ*LRSTCC Trigger: ACAGCATGTACTGCGTAATCACTGTGCCCCTGTCTC...TCTTGGGAGGCTTCCAATGTGCTCAGAATAGATTGGCGTGTAAAATATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTTGTTTTGTTTCTTTaGTGGTGGTTTAGCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGFVLFL*WWFSLL Trigger: CAGCAAGCTAAACCACCATCAAAGAAACAAAACAAA...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | GATGTCAAGAGAAAAAGCAGATCAGCGGTTGCTCAGGTACCAGATCAGGAAGAGAACACACACTGTGCCTaGCAGAACATTTTTATATCT | + |
|
Preference number: 2 (lower is better) Translates to: DVKRKSRSAVAQVPDQEENTHCA*QNIFIS Trigger: AGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTT...CTCTTCCTGATCTGGTACCTGAGCAACCGCTGATCTGCTTTTTCTCTTGACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGCATCACAATGGTTATaGAACCCATCTGTTTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: LGTRVSDGCEPSSRSLELASQWL*NPSVYL Trigger: AAGGTAAACAGATGGGTTGCATAACCATTGTGATGC...TAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTGTAGGCGTCATGTCTaGTTTCCGATACTTTATATA | + |
|
Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGCRRHV*FPILYI Trigger: TATATAAAGTATCGGAAACCAGACATGACGCCTACA...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTCAACCAAGTCTTTTCTTCCTaGCCTTCAACTGAGAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RVSDGCEPSSRSLELGFNQVFSS*PSTEKG Trigger: ACCTTTCTCAGTTGAAGGCCAGGAAGAAAAGACTTG...GTTGAAACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR CAA 90 bp | TGTACTCTCTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATaGGTGGAGATGGAAAAGTCTCTCTTAGAGTGTTCACACAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: CTLWSMYSSLGINSL*VEMEKSLLECSHRM Trigger: CATCCTGTGTGAACACTCTAAGAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAGAGAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATGACCTAGTGGCAATATaGAAGATATCAAGGCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYDLVAI*KISRPS Trigger: GGATGGCCTTGATATCTTTCATATTGCCACTAGGTC...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTACTCAGAGTCCATCTaGTTTTTAAACTGTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GTRVSDGCEPSSRSLELGYSESI*FLNCES Trigger: ACTTTCACAGTTTAAAAAGCAGATGGACTCTGAGTA...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTCAACGCATCACAATGGTTATaGAACCCATCTGTTTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: RVSDGCEPSSRSLELGFNASQWL*NPSVYL Trigger: AAGGTAAACAGATGGGTTGCATAACCATTGTGATGC...GTTGAAACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTCAACTTTTATTTTATTGTGTaGGTTCTGATCCCAGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RVSDGCEPSSRSLELGFNFYFIV*VLIPEP Trigger: GGGCTCTGGGATCAGAACCCACACAATAAAATAAAA...GTTGAAACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGACAAGGTTTGGTTTCTaGCTTATTCAAAACATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LFILIPHHRTTHCRRHVWTRFGF*LIQNIL Trigger: CAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGT...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTTTCCTGGCCTTCAACTaGGAAAGGTGGAGGGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SQLFSSDYIFINSHKQVIFLAFN*ERWREN Trigger: ATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAA...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTTTATTGTGTGGGTTCTaGTCCCAGAGCCCTGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SQLFSSDYIFINSHKQVILLCGF*SQSPVH Trigger: ATGCACAGGGCTCTGGGATCAGAACCCACACAATAA...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGGACCTAGTGGCAATATaGAAGATATCAAGGCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: VSQLFSSDYIFINSHKQVDLVAI*KISRPS Trigger: GGATGGCCTTGATATCTTTCATATTGCCACTAGGTC...CACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | CTATGCTTTGGGAGAATCAGAAGGCATCCTTCCAAATCTAAGATTAGCAACAGAAATGAAAACAGAGATTaGTACATCTCCCTCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LCFGRIRRHPSKSKISNRNENRD*YISLSP Trigger: AGGGGAGAGGGAGATGTATCAATCTCTGTTTTCATT...TCTGTTGCTAATCTTAGATTTGGAAGGATGCCTTCTGATTCTCCCAAAGCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATCCCCTTTCTCAATTGTGGCAGAGGTCACATGGAGATTCACATTTACCAAGAGAGGGAATTATGTTaGGCTAAAGAAACACAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: NIPFLNCGRGHMEIHIYQERELC*AKETQG Trigger: ACCCTGTGTTTCTTTAGCCCAACATAATTCCCTCTC...TTGGTAAATGTGAATCTCCATGTGACCTCTGCCACAATTGAGAAAGGGGATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATAGAGTGTCATTAAGATaGTTTACCAGCAGACAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYRVSLR*FTSRQS Trigger: GGACTGTCTGCTGGTAAACCATCTTAATGACACTCT...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCAACTGCTGTCTACCATaGAGAAATCTCACTGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: MYSSLGINSLLVEMEKSLNCCLP*RNLTVL Trigger: AAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTT...GAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAAACTGCTGTCTACCATaGAGAAATCTCACTGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: LVNVLFSGNKFPIGGDGKNCCLP*RNLTVL Trigger: AAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTT...TTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCCTCCATGTTAACACGTaGCGGTTAAATGCTTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: MYSSLGINSLLVEMEKSLLHVNT*RLNAFF Trigger: AAAGAAAGCATTTAACCGTCACGTGTTAACATGGAG...GAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | AATATCCCCTTTCTCAATTGTGGCAGAGGTCACATGGAGATTCACATTTACCAAGGTGGTTTAGCTTGCTaGGATGGAATTATCTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NIPFLNCGRGHMEIHIYQGGLAC*DGIIFK Trigger: TTTGAAGATAATTCCATCTCAGCAAGCTAAACCACC...TTGGTAAATGTGAATCTCCATGTGACCTCTGCCACAATTGAGAAAGGGGATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGTACTCAGAGTCCATCTaGTTTTTAAACTGTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LFILIPHHRTTHCRRHVWYSESI*FLNCES Trigger: ACTTTCACAGTTTAAAAAGCAGATGGACTCTGAGTA...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCTTAGAGTGTTCGAAGAGCGGTCCAACTaGAAACAAATGGATGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SGNKFPIGGDGKVSLRVFEERSN*KQMDEK Trigger: TTTTTCATCCATTTGTTTGCAGTTGGACCGCTCTTC...GAACACTCTAAGAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGGAGAGGGAATTATGTTaGGCTAAAGAAACACAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VSQLFSSDYIFINSHKQVERELC*AKETQG Trigger: ACCCTGTGTTTCTTTAGCCCAACATAATTCCCTCTC...CACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTTCAACTCCACCTTCATTAATTaGAACAAGTTTAGGCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: RVSDGCEPSSRSLELGFNSTFIN*NKFRLC Trigger: ACAAAGCCTAAACTTGTTCCAATTAATGAAGGTGGA...GTTGAAACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGGTGACATGTTTGCTTTaGGAAATAGAACACTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VSQLFSSDYIFINSHKQVVTCLL*EIEHFL Trigger: GAGGAAGTGTTCTATTTCTCAAAGCAAACATGTCAC...CACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATCGTAGGTCTTTGATTTaGTCATTCTTTTTGGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYRRSLI*SFFLVR Trigger: TCTCACCAAAAAGAATGATCAAATCAAAGACCTACG...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTATTCAAAACATCCTGGTCCACAAATGGAATTTCAGAGAGGGAATTATGTTAAAAAGGAGAATCAGTaGCACACGAGACAGGTACGA | + |
|
Preference number: 2 (lower is better) Translates to: TYSKHPGPQMEFQRGNYVKKENQ*HTRQVR Trigger: TCGTACCTGTCTCGTGTGGCACTGATTCTCCTTTTT...AACATAATTCCCTCTCTGAAATTCCATTTGTGGACCAGGATGTTTTGAATAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | TACTCTCTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATTTCACTCCTAAGAGTTaGAACTGTATTTTCCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: YSLVNVLFSGNKFPIGGDFTPKS*NCIFQV Trigger: GACTTGGAAAATACAGTTGCAACTCTTAGGAGTGAA...ATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAGAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATTTGTATGTTCATGTGTaGCAGGTTCTAGACAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYLYVHV*QVLDKI Trigger: GATTTTGTCTAGAACCTGCCACACATGAACATACAA...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAATTGTATGTTCATGTGTaGCAGGTTCTAGACAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: LVNVLFSGNKFPIGGDGKLYVHV*QVLDKI Trigger: GATTTTGTCTAGAACCTGCCACACATGAACATACAA...TTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAATGTAGGCGTCATGTCTaGTTTCCGATACTTTATATA | + |
|
Preference number: 2 (lower is better) Translates to: LVNVLFSGNKFPIGGDGKCRRHV*FPILYI Trigger: TATATAAAGTATCGGAAACCAGACATGACGCCTACA...TTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGTTACAAGGTTTGGTTTCTGACTTATTCAAAACATCCTGGTCCACAAATGGAAGAGCGGTCCAACTaGAAACAAATGGATGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSYKVWFLTYSKHPGPQMEERSN*KQMDEK Trigger: TTTTTCATCCATTTGTTTGCAGTTGGACCGCTCTTC...CATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTGTGACATGTTTGCTTTaGGAAATAGAACACTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SQLFSSDYIFINSHKQVIVTCLL*EIEHFL Trigger: GAGGAAGTGTTCTATTTCTCAAAGCAAACATGTCAC...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTGGTGGTTTAGCTTGCTaGGATGGAATTATCTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQLFSSDYIFINSHKQVIGGLAC*DGIIFK Trigger: TTTGAAGATAATTCCATCTCAGCAAGCTAAACCACC...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTTCTCTCTTCCCTTTCAGGTTCATTTATCATCCTAAGATTGCCTTCCCAGTACTCAGAGTCCATCTaGTTTTTAAACTGTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IFLSSLSGSFIILRLPSQYSESI*FLNCES Trigger: ACTTTCACAGTTTAAAAAGCAGATGGACTCTGAGTA...CTGGGAAGGCAATCTTAGGATGATAAATGAACCTGAAAGGGAAGAGAGAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTGCATCACAATGGTTATaGAACCCATCTGTTTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: SQLFSSDYIFINSHKQVIASQWL*NPSVYL Trigger: AAGGTAAACAGATGGGTTGCATAACCATTGTGATGC...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR CAA 90 bp | TCTCATCCAGAGCATTTACAGCCTGTATTTCAATGGTCTTCAGCCTaGACTTTAGTTTTTCATTCTCTTGTTGAAGTCTTAAAATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SHPEHLQPVFQWSSA*TLVFHSLVEVLKFP Trigger: AGGAAATTTTAAGACTTCAACAAGAGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTGAAATACAGGCTGTAAATGCTCTGGATGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTACAAGGTTTGGTTTCTaGCTTATTCAAAACATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SQLFSSDYIFINSHKQVITRFGF*LIQNIL Trigger: CAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGT...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | AGTGCCACACGAGACAGGTACGAGACAGGGGCACAGTaGTTACGCAGTACATGCTGTAGAAGACAGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SATRDRYETGAQ*LRSTCCRRQAS Trigger: TGATGCCTGTCTTCTACAGCATGTACTGCGTAATCACTGTGCCCCTGTCTCGTACCTGTCTCGTGTGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | ATTGCTGCAGAAACCCCAGGACAAACAGCAGCAACCTaGGTCATGCAAACCCTCTGCTGGGTTGTTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IAAETPGQTAAT*VMQTLCWVVGR Trigger: TCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTGCTGTTTGTCCTGGGGTTTCTGCAGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR GCA 72 bp | CAGAAACCCCAGGACAAACAGCAGCAACCTGAGTCATaGAAACCCTCTGCTGGGTTGTTGGGAGATGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QKPQDKQQQPES*KPSAGLLGDVL Trigger: TAGGACATCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTGCTGTTTGTCCTGGGGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | GAATCCAGGGGTAGACAGGCTGGGGCATATAAATGCTaGGCATCACTTGTGAGCTTCAGCTTTGGTGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: ESRGRQAGAYKC*ASLVSFSFGDG Trigger: GCCATCACCAAAGCTGAAGCTCACAAGTGATGCCCAGCATTTATATGCCCCAGCCTGTCTACCCCTGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR GCA 72 bp | GTCATTAAGATGGTTTACCAGCAGACAGTCCACAGTTaGCTGGACACTATCCGCTCACTTAGGGCTCGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VIKMVYQQTVHS*LDTIRSLRARS Trigger: GCTTCGAGCCCTAAGTGAGCGGATAGTGTCCAGGCAACTGTGGACTGTCTGCTGGTAAACCATCTTAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR GCA 72 bp | GGGCTAAAGAAACACAGGGTGAAAGTGCATCCTCAATaGAAGCCCTACGTGAAACTGAAGAGCGGTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: GLKKHRVKVHPQ*KPYVKLKSGPT Trigger: AGTTGGACCGCTCTTCAGTTTCACGTAGGGCTTGCATTGAGGATGCACTTTCACCCTGTGTTTCTTTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR GCA 72 bp | GAATTCACACCGTACACTTTGAAGACACTCCTCCATTaGTGCAGAAACCCCAGGACAAACAGCAGCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: EFTPYTLKTLLH*CRNPRTNSSNL Trigger: CAGGTTGCTGCTGTTTGTCCTGGGGTTTCTGCAGCAATGGAGGAGTGTCTTCAAAGTGTACGGTGTGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | TTAAGTGCTGCACCCTGGCCAAGAGTGTCATTAAGATaGTTTACCAGCAGACAGTCCACAGTTGCCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSAAPWPRVSLR*FTSRQSTVAWT Trigger: TGTCCAGGCAACTGTGGACTGTCTGCTGGTAAACCATCTTAATGACACTCTTGGCCAGGGTGCAGCACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCCTTGGGACTGGAATAAATTCCCTATaGGTGGAGATGGAAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HEPRCLQKSEEGVRSLGTGINSL*VEMEKS Trigger: AGACTTTTCCATCTCCACCAATAGGGAATTTATTCC...AGTCCCAAGGGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR CCA 72 bp | GGAAGCCTCCCAAGAGGAAAGGATATGAGTGGGAGATaGCTTCAGATAGCTTCCCATACTTCTATGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSLPRGKDMSGR*LQIASHTSMLW Trigger: CCAAAGCATAGAAGTATGGGAAGCTATCTGAAGCCATCTCCCACTCATATCCTTTCCTCTTGGGAGGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCTGTGACATGTTTGCTTaGAGAAATAGAACACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSCDMFA*RNRTLP Trigger: AGGAAGTGTTCTATTTCTCAAAGCAAACATGTCACA...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | ATGGCTCTTCTTCCCACTCTAAACTGCTGTCTACCATaGAGAAATCTCACTGTACTTGCATGGAGGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MALLPTLNCCLP*RNLTVLAWRLW Trigger: CCAGAGCCTCCATGCAAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTTTAGAGTGGGAAGAAGAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR GCA 72 bp | GGAAGTCTTGAGGTTTCCAAGATGCAGCAGATCCTATaGACTTCACTCTTAAGGAAGAGTGCCTTAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSLEVSKMQQIL*TSLLRKSALSP Trigger: AGGGCTTAAGGCACTCTTCCTTAAGAGTGAAGTGCATAGGATCTGCTGCATCTTGGAAACCTCAAGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR GCA 72 bp | CAAACAGGCAGGATAACAACAGCAACAGTTGTGAGATaGTGTTTCACTGAGAGACCAAGGCTAGGCCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: QTGRITTATVVR*CFTERPRLGLI Trigger: TATGAGGCCTAGCCTTGGTCTCTCAGTGAAACAGCATCTCACAACTGTTGCTGTTGTTATCCTGCCTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | GCACATTGGAAGCCTCCCAAGAGGAAAGGATATGAGTaGGAGATGGCTTCAGATAGCTTCCCATACTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AHWKPPKRKGYE*EMASDSFPYFY Trigger: ATAGAAGTATGGGAAGCTATCTGAAGCCATCTCCCACTCATATCCTTTCCTCTTGGGAGGCTTCCAATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR GCA 72 bp | AAACTGCTGTCTACCATGAAGAAATCTCACTGTACTTaGATGGAGGCTCTGGAGCATATGACAGAGGCGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KLLSTMKKSHCT*MEALEHMTEAY Trigger: ATACGCCTCTGTCATATGCTCCAGAGCCTCCATGCAAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR GCA 72 bp | GTTGTTGGGAGATGTCCTAAGAGATACAGACACAGTTaGTCATTATCCCACTACCTCACTCCTACTCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVGRCPKRYRHS*SLSHYLTPTLS Trigger: GGAAAGAGTAGGAGTGAGGTAGTGGGATAATGAGCAACTGTGTCTGTATCTCTTAGGACATCTCCCAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | ACATGTGGTGCAGTGTCTTACCAAGTCTTTTCTTCCTaGCCTTCAACTGAGAAAGGTGGAGGGAGAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: TCGAVSYQVFSS*PSTEKGGGRIQ Trigger: TTGTATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAAGAAAAGACTTGGTAAGACACTGCACCACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR CCA 72 bp | GAACACACACTGTGCCTGACAGAACATTTTTATATCTaGGGTGACTGCTGTTGGCTACAGTCTCCTTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EHTLCLTEHFYI*GDCCWLQSPFP Trigger: AGGAAAAGGAGACTGTAGCCAACAGCAGTCACCCCAGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTCTCTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGAAATCTCACTGTACTaGCATGGAGGCTCTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSLVNVLFSGNKFPIGGDEISLY*HGGSGA Trigger: TGCTCCAGAGCCTCCATGCAAGTACAGTGAGATTTC...ATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAGAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | AAACTTAAGACCCAGCAATCTATAACATATCATAACTaGGGTCAGAATCCAGGGGTAGACAGGCTGGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KLKTQQSITYHN*GQNPGVDRLGH Trigger: ATGCCCCAGCCTGTCTACCCCTGGATTCTGACCTCAGTTATGATATGTTATAGATTGCTGGGTCTTAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR GCA 72 bp | TCTCAAAGTGCAGATGGCAGAAGGCTGGCTGTCAATTaGTACTGTAGCAGTTGTAGGTTGTATTCCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SQSADGRRLAVN*YCSSCRLYSLV Trigger: AACTAAGGAATACAACCTACAACTGCTACAGTAGCAATTGACAGCCAGCCTTCTGCCATCTGCACTTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | TTTAGGCTTTGTGATATCTATGATGGGCTCCTGTCTTaGGTAACCTGTCTATGGTACACAGCTAAGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FRLCDIYDGLLS*VTCLWYTAKKQ Trigger: CTGCTTCTTAGCTGTGTACCATAGACAGGTTACCCAAGACAGGAGCCCATCATAGATATCACAAAGCCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTTACAAGGTTTGGTTTCTGACTTATTCAAAACATCCTGGTCCACAAATGGAAATCTCACTGTACTaGCATGGAGGCTCTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSYKVWFLTYSKHPGPQMEISLY*HGGSGA Trigger: TGCTCCAGAGCCTCCATGCAAGTACAGTGAGATTTC...CATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | GATAACAACAGCAACAGTTGTGAGATGCTGTTTCACTaGGAGACCAAGGCTAGGCCTCATAGTAAGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: DNNSNSCEMLFH*ETKARPHSKYF Trigger: AAAATACTTACTATGAGGCCTAGCCTTGGTCTCTCAGTGAAACAGCATCTCACAACTGTTGCTGTTGTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCAACCTGGAACTTAGTGCCTTTATGTTGAGTCAAAGTTTGAAAGAATTCGAAATCTCACTGTACTaGCATGGAGGCTCTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KFNLELSAFMLSQSLKEFEISLY*HGGSGA Trigger: TGCTCCAGAGCCTCCATGCAAGTACAGTGAGATTTC...GAATTCTTTCAAACTTTGACTCAACATAAAGGCACTAAGTTCCAGGTTGAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGTGTGACATGTTTGCTTaGAGAAATAGAACACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFILIPHHRTTHCRRHVWCDMFA*RNRTLP Trigger: AGGAAGTGTTCTATTTCTCAAAGCAAACATGTCACA...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATCTTCAGATTCATATTTaGCCAGTCTTTTCCGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYLQIHI*PVFSVG Trigger: ACCTACGGAAAAGACTGGCAAAATATGAATCTGAAG...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | GAATATGACAAAATGCTTCTAAATACATGCCTGAGGTaGATGGAGATAGCTTGTATGTTCATGTGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EYDKMLLNTCLR*MEIACMFMCGR Trigger: CCTGCCACACATGAACATACAAGCTATCTCCATTCACCTCAGGCATGTATTTAGAAGCATTTTGTCATATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | AGTGTCTTACCAAGTCTTTTCTTCCTGGCCTTCAACTaGGAAAGGTGGAGGGAGAATACAATTAAACCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SVLPSLFFLAFN*ERWRENTIKPF Trigger: AAATGGTTTAATTGTATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAAGAAAAGACTTGGTAAGACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR CCA 72 bp | TGTAGGCGTCATGTCTGGTTTCCGATACTTTATATATaGTCACCCGAGGAAAAGTACATCAATGGAGATATT | + |
|
Preference number: 3 (lower is better) Translates to: CRRHVWFPILYI*SPEEKYINGDI Trigger: AATATCTCCATTGATGTACTTTTCCTCGGGTGACCATATATAAAGTATCGGAAACCAGACATGACGCCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGGGAATAAATTCCCTATaGGTGGAGATGGAAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VSQLFSSDYIFINSHKQVGINSL*VEMEKS Trigger: AGACTTTTCCATCTCCACCAATAGGGAATTTATTCC...CACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATCAATGGTCTTCAGCCTaGACTTTAGTTTTTCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYQWSSA*TLVFHS Trigger: AGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTG...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | TATGATAGACCATACTACAGGGAACTTCTCAACAATTaGAGGAATATACTGCTAGTATCCACACAGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YDRPYYRELLNN*RNILLVSTQTR Trigger: CCTTGTCTGTGTGGATACTAGCAGTATATTCCTTCAATTGTTGAGAAGTTCCCTGTAGTATGGTCTATCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | TTCACTCTTAAGGAAGAGTGCCTTAAGCCCTCAGCATaGATGTACAGTAATCCTAATAAGCTTGTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FTLKEECLKPSA*MYSNPNKLVCF Trigger: AAAACAAACAAGCTTATTAGGATTACTGTACATCCATGCTGAGGGCTTAAGGCACTCTTCCTTAAGAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR CCA 72 bp | ACCTACATACTTCCAGGATTTAAAGCAAAGCTGAGATaGATGACTGATAATTTCATGCAATGCAACAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TYILPGFKAKLR*MTDNFMQCNRE Trigger: TTCCCTGTTGCATTGCATGAAATTATCAGTCATCCATCTCAGCTTTGCTTTAAATCCTGGAAGTATGTAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR TCA 72 bp | ACTATAGAGAACTTTATACAAGACAACACTGATAACTaGATTCACACCGTACACTTTGAAGACACTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TIENFIQDNTDN*IHTVHFEDTPP Trigger: TGGAGGAGTGTCTTCAAAGTGTACGGTGTGAATTCAGTTATCAGTGTTGTCTTGTATAAAGTTCTCTATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| 3UTR TCA 72 bp | TTACACGTACTCAGAGTCCATCTGCTTTTTAAACTGTaGAAGTATACGATGAATCTGACTTCTCTGTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LHVLRVHLLFKL*KYTMNLTSLFI Trigger: TATGAACAGAGAAGTCAGATTCATCGTATACTTTCACAGTTTAAAAAGCAGATGGACTCTGAGTACGTGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | AGACACATTTTCCACTTAGTTACAAGGTTTGGTTTCTaGCTTATTCAAAACATCCTGGTCCACAAATGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RHIFHLVTRFGF*LIQNILVHKWN Trigger: ATTCCATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAGTGGAAAATGTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| 3UTR TCA 72 bp | AGTAAGTATTTTTATATTTTACACGCCAATCTATTCTaGGCACATTGGAAGCCTCCCAAGAGGAAAGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: SKYFYILHANLF*AHWKPPKRKGY Trigger: ATATCCTTTCCTCTTGGGAGGCTTCCAATGTGCTCAGAATAGATTGGCGTGTAAAATATAAAAATACTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCCAAACCTCATCAATGGTaGAAGTCTCCTCCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAPHEPRCLQKSEEGVRSKPHQW*KSPPPA Trigger: GGCTGGTGGAGGAGACTTTCACCATTGATGAGGTTT...GGATCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGCTAAAGAAACACAGGGTGAAAGTGCATCCTCAATGCAAGCCCTACGTGGCTGCTCCTGTACTCTaGGGAGGTCATGTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLKKHRVKVHPQCKPYVAAPVL*GGHVWL Trigger: CAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGC...CACGTAGGGCTTGCATTGAGGATGCACTTTCACCCTGTGTTTCTTTAGCCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
||
| 3UTR CAA 72 bp | CAGCAACCTGAGTCATGCAAACCCTCTGCTGGGTTGTaGGGAGATGTCCTAAGAGATACAGACACAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQPESCKPSAGL*GDVLRDTDTVA Trigger: AGCAACTGTGTCTGTATCTCTTAGGACATCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGCACCACATGAGCCCCGGTGCTTGCAGAAGTCAGAAGAAGGTGTCAGATCTCAAGCCTCTTTTTaGACGAGCAAAACGCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLAPHEPRCLQKSEEGVRSQASF*TSKTHV Trigger: TACATGCGTTTTGCTCGTTCAAAAAGAGGCTTGAGA...TCTGACACCTTCTTCTGACTTCTGCAAGCACCGGGGCTCATGTGGTGCTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000166097.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTATACCACTTCTCAGCTTaGGAGAACAGCTGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTRVSDGCEPSSRSLELYHFSA*ENSCRR Trigger: CCTACGGCAGCTGTTCTCCCAAGCTGAGAAGTGGTA...TAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGTACCACTTCTCAGCTTaGGAGAACAGCTGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFILIPHHRTTHCRRHVWYHFSA*ENSCRR Trigger: CCTACGGCAGCTGTTCTCCCAAGCTGAGAAGTGGTA...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATGCTGCTCCTGTACTCTaGGGAGGTCATGTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYAAPVL*GGHVWL Trigger: CAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGC...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
||
| CDS-3UTR CCA 90 bp | ACTTATTCAAAACATCCTGGTCCACAAATGGAATTTCAGAGAGGGAATTATGTTCTCCACCAGCCATGGTaGCGGCGGATCCGACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TYSKHPGPQMEFQRGNYVLHQPW*RRIRQE Trigger: TTCCTGTCGGATCCGCCGCCACCATGGCTGGTGGAG...AACATAATTCCCTCTCTGAAATTCCATTTGTGGACCAGGATGTTTTGAATAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTTCTCAAGCCTCTTTTTaGACGAGCAAAACGCATGTA | + |
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Preference number: 4 (lower is better) Translates to: GTRVSDGCEPSSRSLELGSQASF*TSKTHV Trigger: TACATGCGTTTTGCTCGTTCAAAAAGAGGCTTGAGA...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000166097.8 |
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| CDS-3UTR TCA 90 bp | GAGGTGAATGGAGATAGCTTGTATGTTCATGTGTGGCAGGTTCTAGACAAAATCCTGTCCTTGAGGTCCTaGAAGCAGGAATCTACCGTT | + |
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Preference number: 4 (lower is better) Translates to: EVNGDSLYVHVWQVLDKILSLRS*KQESTV Trigger: AACGGTAGATTCCTGCTTTCAGGACCTCAAGGACAG...GATTTTGTCTAGAACCTGCCACACATGAACATACAAGCTATCTCCATTCACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000166097.8 |
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| CDS-3UTR CCA 90 bp | ATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCTACCACTTCTCAGCTTaGGAGAACAGCTGCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: MYSSLGINSLLVEMEKSLYHFSA*ENSCRR Trigger: CCTACGGCAGCTGTTCTCCCAAGCTGAGAAGTGGTA...GAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| CDS-3UTR TCA 90 bp | CTTAGTTACAAGGTTTGGTTTCTGACTTATTCAAAACATCCTGGTCCACAAATGGCTGCTCCTGTACTCTaGGGAGGTCATGTTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSYKVWFLTYSKHPGPQMAAPVL*GGHVWL Trigger: CAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGC...CATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR GCA 90 bp | ATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCACTCCTTTTCAGCCATaGTCAGCTGCTCCTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: MYSSLGINSLLVEMEKSLTPFQP*SAAPVL Trigger: GAGTACAGGAGCAGCTGAGCATGGCTGAAAAGGAGT...GAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000165754.8 |
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| CDS-3UTR CCA 90 bp | ATTTTTCTCTCTTCCCTTTCAGGTTCATTTATCATCCTAAGATTGCCTTCCCAGTACCACTTCTCAGCTTaGGAGAACAGCTGCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: IFLSSLSGSFIILRLPSQYHFSA*ENSCRR Trigger: CCTACGGCAGCTGTTCTCCCAAGCTGAGAAGTGGTA...CTGGGAAGGCAATCTTAGGATGATAAATGAACCTGAAAGGGAAGAGAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| CDS-3UTR TCA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTGATGGGCTTTTTACTTaGAGATACAAATTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GTRVSDGCEPSSRSLELGDGLFT*RYKFCL Trigger: AAGGCAGAATTTGTATCTTCAAGTAAAAAGCCCATC...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR TCA 90 bp | GATGTCAAGAGAAAAAGCAGATCAGCGGTTGCTCAGGTACCAGATCAGGAAGAGCGTAGGTCTTTGATTTaGTCATTCTTTTTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: DVKRKSRSAVAQVPDQEERRSLI*SFFLVR Trigger: TCTCACCAAAAAGAATGATCAAATCAAAGACCTACG...CTCTTCCTGATCTGGTACCTGAGCAACCGCTGATCTGCTTTTTCTCTTGACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS-3UTR GCA 90 bp | TCTTCTTCCCACTCTAAACTGCTGTCTACCATGAAGAAATCTCACTGTACTTGCATATCTTTTCAGCCATaGTCAGCTGCTCCTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: SSSHSKLLSTMKKSHCTCISFQP*SAAPVL Trigger: GAGTACAGGAGCAGCTGAGCATGGCTGAAAAGATAT...GCAAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTTTAGAGTGGGAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098258.10 |
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| 3UTR CAA 72 bp | GAGATGGCTTCAGATAGCTTCCCATACTTCTATGCTTaGGGAGAATCAGAAGGCATCCTTCCAAATCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: EMASDSFPYFYA*GESEGILPNLR Trigger: TCTTAGATTTGGAAGGATGCCTTCTGATTCTCCCAAAGCATAGAAGTATGGGAAGCTATCTGAAGCCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR CAA 72 bp | TACATTAAGATGTCAAGAGAAAAAGCAGATCAGCGGTaGCTCAGGTACCAGATCAGGAAGAGTGATACAAGG | + |
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Preference number: 4 (lower is better) Translates to: YIKMSREKADQR*LRYQIRKSDTR Trigger: CCTTGTATCACTCTTCCTGATCTGGTACCTGAGCAACCGCTGATCTGCTTTTTCTCTTGACATCTTAATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| 3UTR CAA 72 bp | GCTTCTAAATACATGCCTGAGGTGAATGGAGATAGCTaGTATGTTCATGTGTGGCAGGTTCTAGACAAAATC | + |
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Preference number: 4 (lower is better) Translates to: ASKYMPEVNGDS*YVHVWQVLDKI Trigger: GATTTTGTCTAGAACCTGCCACACATGAACATACAAGCTATCTCCATTCACCTCAGGCATGTATTTAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 ENSMUST00000166097.8 |
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| 3UTR CAA 72 bp | ATGACTGATAATTTCATGCAATGCAACAGGGAAGTCTaGAGGTTTCCAAGATGCAGCAGATCCTATGCACTT | + |
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Preference number: 4 (lower is better) Translates to: MTDNFMQCNREV*RFPRCSRSYAL Trigger: AAGTGCATAGGATCTGCTGCATCTTGGAAACCTCAAGACTTCCCTGTTGCATTGCATGAAATTATCAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS-3UTR TCA 90 bp | AAGTTCAACCTGGAACTTAGTGCCTTTATGTTGAGTCAAAGTTTGAAAGAATTCCTGTCCTTGAGGTCCTaGAAGCAGGAATCTACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KFNLELSAFMLSQSLKEFLSLRS*KQESTV Trigger: AACGGTAGATTCCTGCTTTCAGGACCTCAAGGACAG...GAATTCTTTCAAACTTTGACTCAACATAAAGGCACTAAGTTCCAGGTTGAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000166097.8 |
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| CDS-3UTR TCA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGGATGGGCTTTTTACTTaGAGATACAAATTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LFILIPHHRTTHCRRHVWDGLFT*RYKFCL Trigger: AAGGCAGAATTTGTATCTTCAAGTAAAAAGCCCATC...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR GCA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGTTCACTCCTAAGAGTTaGAACTGTATTTTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFILIPHHRTTHCRRHVWFTPKS*NCIFQV Trigger: GACTTGGAAAATACAGTTGCAACTCTTAGGAGTGAA...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR GCA 90 bp | AAGTTCAACCTGGAACTTAGTGCCTTTATGTTGAGTCAAAGTTTGAAAGAATTCACTCCTTTTCAGCCATaGTCAGCTGCTCCTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KFNLELSAFMLSQSLKEFTPFQP*SAAPVL Trigger: GAGTACAGGAGCAGCTGAGCATGGCTGAAAAGGAGT...GAATTCTTTCAAACTTTGACTCAACATAAAGGCACTAAGTTCCAGGTTGAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000165754.8 |
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| CDS-3UTR GCA 90 bp | TCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCTTAGAGTGTTCTTCACTCCTAAGAGTTaGAACTGTATTTTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNKFPIGGDGKVSLRVFFTPKS*NCIFQV Trigger: GACTTGGAAAATACAGTTGCAACTCTTAGGAGTGAA...GAACACTCTAAGAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR TCA 90 bp | CTTAGTTACAAGGTTTGGTTTCTGACTTATTCAAAACATCCTGGTCCACAAATGGATGGGCTTTTTACTTaGAGATACAAATTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSYKVWFLTYSKHPGPQMDGLFT*RYKFCL Trigger: AAGGCAGAATTTGTATCTTCAAGTAAAAAGCCCATC...CATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR GCA 90 bp | CTTAGTTACAAGGTTTGGTTTCTGACTTATTCAAAACATCCTGGTCCACAAATGTTCACTCCTAAGAGTTaGAACTGTATTTTCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LSYKVWFLTYSKHPGPQMFTPKS*NCIFQV Trigger: GACTTGGAAAATACAGTTGCAACTCTTAGGAGTGAA...CATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR TCA 90 bp | AAGTTCAACCTGGAACTTAGTGCCTTTATGTTGAGTCAAAGTTTGAAAGAATTCCGTAGGTCTTTGATTTaGTCATTCTTTTTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KFNLELSAFMLSQSLKEFRRSLI*SFFLVR Trigger: TCTCACCAAAAAGAATGATCAAATCAAAGACCTACG...GAATTCTTTCAAACTTTGACTCAACATAAAGGCACTAAGTTCCAGGTTGAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000165754.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGCTCTTCAGCTCTGACTATATTTTCATTAATTCACATAAACAGGTGATTTCCACCTTCATTAATTaGAACAAGTTTAGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SQLFSSDYIFINSHKQVISTFIN*NKFRLC Trigger: ACAAAGCCTAAACTTGTTCCAATTAATGAAGGTGGA...AATCACCTGTTTATGTGAATTAATGAAAATATAGTCAGAGCTGAAGAGCTGGCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS TCA 90 bp | CCACAGCCTGCAGCCCATTTAGGACTTCTGAAACCTCATCAATGGTaGAAGTCTCCTCCACCAGCCATGGTGGCGGCGGATCCGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: PQPAAHLGLLKPHQW*KSPPPAMVAADPTG Trigger: TCCTGTCGGATCCGCCGCCACCATGGCTGGTGGAGGAGACTTTCACCATTGATGAGGTTTCAGAAGTCCTAAATGGGCTGCAGGCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS GCA 90 bp | GCTGTATTGATGAGCTCGGACTCCACCTCACTGTGTACCACAGCCTaGAGCCCATTTAGGACTTCTGAAACCTCATCAATGGTGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: AVLMSSDSTSLCTTA*SPFRTSETSSMVKV Trigger: GACTTTCACCATTGATGAGGTTTCAGAAGTCCTAAATGGGCTGCAGGCTGTGGTACACAGTGAGGTGGAGTCCGAGCTCATCAATACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000163207.2 ENSMUST00000165754.8 ENSMUST00000166097.8 ENSMUST00000168921.2 |
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| CDS-3UTR CAA 90 bp | GGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTAGGTGTACTCTTTCCAATTTaGACTTCTCATCCAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GTRVSDGCEPSSRSLELGVLFPI*TSHPEH Trigger: ATGCTCTGGATGAGAAGTCAAAATTGGAAAGAGTAC...ACCTAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | GAGCCTGGAATTAGGTTTCAACTCTATGCCATAGACTCTCTGCAAGATAACTATGTCTCAAGCCTCTTTTaGAACGAGCAAAACGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: EPGIRFQLYAIDSLQDNYVSSLF*NEQNAC Trigger: ACATGCGTTTTGCTCGTTCAAAAAGAGGCTTGAGAC...ATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000166097.8 |
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| CDS-3UTR CAA 90 bp | ATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAAGTCTCTCGTCTCAAGCCTCTTTTaGAACGAGCAAAACGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: MYSSLGINSLLVEMEKSLVSSLF*NEQNAC Trigger: ACATGCGTTTTGCTCGTTCAAAAAGAGGCTTGAGAC...GAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000166097.8 |
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| CDS-3UTR CAA 90 bp | CTTGGGACTAGAGTTTCAGATGGTTGTGAGCCATCAAGTAGGAGCCTGGAATTACAATGGTCTTCAGCCTaGACTTTAGTTTTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGTRVSDGCEPSSRSLELQWSSA*TLVFHS Trigger: AGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTG...TAATTCCAGGCTCCTACTTGATGGCTCACAACCATCTGAAACTCTAGTCCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | TTATTTATTCTCATACCACATCACCGCACCACACATTGTAGGCGTCATGTCTGGGTACTCTTTCCAATTTaGACTTCTCATCCAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LFILIPHHRTTHCRRHVWVLFPI*TSHPEH Trigger: ATGCTCTGGATGAGAAGTCAAAATTGGAAAGAGTAC...CCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGAATGGAGATAGCTTGTATGTTCATGTGTGGCAGGTTCTAGACAAAATCCTTCAGATTCATATTTaGCCAGTCTTTTCCGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVNGDSLYVHVWQVLDKILQIHI*PVFSVG Trigger: ACCTACGGAAAAGACTGGCAAAATATGAATCTGAAG...GATTTTGTCTAGAACCTGCCACACATGAACATACAAGCTATCTCCATTCACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | TACTCTCTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATCTTCAGATTCATATTTaGCCAGTCTTTTCCGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YSLVNVLFSGNKFPIGGDLQIHI*PVFSVG Trigger: ACCTACGGAAAAGACTGGCAAAATATGAATCTGAAG...ATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAGAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026274.14 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | CTGGTCAATGTACTCTTCTCTGGGAATAAATTCCCTATTGGTGGAGATGGAAAACAATGGTCTTCAGCCTaGACTTTAGTTTTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVNVLFSGNKFPIGGDGKQWSSA*TLVFHS Trigger: AGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTG...TTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | CTTAGTTACAAGGTTTGGTTTCTGACTTATTCAAAACATCCTGGTCCACAAATGGTACTCTTTCCAATTTaGACTTCTCATCCAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSYKVWFLTYSKHPGPQMVLFPI*TSHPEH Trigger: ATGCTCTGGATGAGAAGTCAAAATTGGAAAGAGTAC...CATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS-3UTR CAA 90 bp | ACTTATTCAAAACATCCTGGTCCACAAATGGAATTTCAGAGAGGGAATTATGTTCAATGGTCTTCAGCCTaGACTTTAGTTTTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TYSKHPGPQMEFQRGNYVQWSSA*TLVFHS Trigger: AGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTG...AACATAATTCCCTCTCTGAAATTCCATTTGTGGACCAGGATGTTTTGAATAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000165754.8 |
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| CDS CCA 72 bp | CTCATCAATGGTGAAAGTCTCCTCCACCAGCCATGGTaGCGGCGGATCCGACAGGAAACAGGGAGGCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LINGESLLHQPW*RRIRQETGRPA Trigger: TGCCGGCCTCCCTGTTTCCTGTCGGATCCGCCGCCACCATGGCTGGTGGAGGAGACTTTCACCATTGATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS CCA 72 bp | AACCTCATCAATGGTGAAAGTCTCCTCCACCAGCCATaGTGGCGGCGGATCCGACAGGAAACAGGGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: NLINGESLLHQP*WRRIRQETGRP Trigger: CGGCCTCCCTGTTTCCTGTCGGATCCGCCGCCACCATGGCTGGTGGAGGAGACTTTCACCATTGATGAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS TCA 72 bp | GCAGCCCATTTAGGACTTCTGAAACCTCATCAATGGTaGAAGTCTCCTCCACCAGCCATGGTGGCGGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AAHLGLLKPHQW*KSPPPAMVAAD Trigger: ATCCGCCGCCACCATGGCTGGTGGAGGAGACTTTCACCATTGATGAGGTTTCAGAAGTCCTAAATGGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165754.8 |
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| CDS GCA 72 bp | ATGAGCTCGGACTCCACCTCACTGTGTACCACAGCCTaGAGCCCATTTAGGACTTCTGAAACCTCATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: MSSDSTSLCTTA*SPFRTSETSSM Trigger: CATTGATGAGGTTTCAGAAGTCCTAAATGGGCTGCAGGCTGTGGTACACAGTGAGGTGGAGTCCGAGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026274.14 ENSMUST00000098258.10 ENSMUST00000163207.2 ENSMUST00000165754.8 ENSMUST00000166097.8 ENSMUST00000168921.2 |
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| CDS CAA 90 bp | AGTACTCTTTCCAATTTTGACTTCTCATCCAGAGCATTTACAGCCTaGTTTAGGAGCTCTGTAGTTCCACCTTCATTAATTGGAACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: STLSNFDFSSRAFTA*FRSSVVPPSLIGTS Trigger: ACTTGTTCCAATTAATGAAGGTGGAACTACAGAGCTCCTAAACAAGGCTGTAAATGCTCTGGATGAGAAGTCAAAATTGGAAAGAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168921.2 |
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| CDS CAA 72 bp | TCCAATTTTGACTTCTCATCCAGAGCATTTACAGCCTaGTTTAGGAGCTCTGTAGTTCCACCTTCATTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SNFDFSSRAFTA*FRSSVVPPSLI Trigger: AATTAATGAAGGTGGAACTACAGAGCTCCTAAACAAGGCTGTAAATGCTCTGGATGAGAAGTCAAAATTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168921.2 |
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