Pregenerated sensors for LYZL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020945Ensembl transcript IDs: ENSMUST00000021328.8, ENSMUST00000107014.8
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTCTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTaGACACAAGCAGGGAGCCGAGGTAAGATATTTCCCTCCAGGACT | + |
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Preference number: 1 (lower is better) Translates to: SSWFTNDRNRGTGPG*TQAGSRGKIFPSRT Trigger: AGTCCTGGAGGGAAATATCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAGCCGAGGTAAGATTCCCTCCAGGACTCTaGTCAGTTTTACTTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: IGTEELGLAEHKQGAEVRFPPGL*SVLLAS Trigger: ACTTGCAAGTAAAACTGACCAGAGTCCTGGAGGGAA...TCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGTTCCCTCCAGGACTCTaGTCAGTTTTACTTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LLGLQMIGTEELGLAEHKFPPGL*SVLLAS Trigger: ACTTGCAAGTAAAACTGACCAGAGTCCTGGAGGGAA...CTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| 3UTR TCA 72 bp | TTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTaGACACAAGCAGGGAGCCGAGGTAAGATATTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FTNDRNRGTGPG*TQAGSRGKIFP Trigger: GGGAAATATCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAGCCGAGGTAAGATGCACAGTGAATGGTTaGAATGAGGTTGGGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: IGTEELGLAEHKQGAEVRCTVNG*NEVGTQ Trigger: CTGAGTCCCAACCTCATTTCAACCATTCACTGTGCA...TCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CCA 90 bp | ATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAGCCGAGGTAAGAGTTCTTCATCCCTCCTaGTCCAGACACAATCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: IGTEELGLAEHKQGAEVRVLHPS*SRHNLF Trigger: AAAAAGATTGTGTCTGGACCAGGAGGGATGAAGAAC...TCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAGCCGAGGTAAGATCACCTTTGATATGTTaGAGTTGCTTTCCACAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IGTEELGLAEHKQGAEVRSPLIC*SCFPQK Trigger: CTTTTGTGGAAAGCAACTTCAACATATCAAAGGTGA...TCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR TCA 90 bp | GGGAGCCGAGGTAAGATATTTCCCTCCAGGACTCTGGTCAGTTTTACTTGCAAGACCAGTAACGACTGTTaGTCTGGAAGATGCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: GSRGKIFPSRTLVSFTCKTSNDC*SGRCHS Trigger: ACTATGGCATCTTCCAGATCAACAGTCGTTACTGGT...CTTGCAAGTAAAACTGACCAGAGTCCTGGAGGGAAATATCTTACCTCGGCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR GCA 90 bp | GGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAGGTCGTCCTAAACAGTaGAATTTCCATTCTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: GLQMIGTEELGLAEHKQGGRPKQ*NFHSTQ Trigger: CTGGGTAGAATGGAAATTGCACTGTTTAGGACGACC...TCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR TCA 90 bp | CTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGACCAGTAACGACTGTTaGTCTGGAAGATGCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: LGLQMIGTEELGLAEHKQTSNDC*SGRCHS Trigger: ACTATGGCATCTTCCAGATCAACAGTCGTTACTGGT...CTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR TCA 90 bp | GGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAAGTGAATGGTTGAAATaGGGTTGGGACTCAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: GLQMIGTEELGLAEHKQGSEWLK*GWDSVV Trigger: AACTACTGAGTCCCAACCTCATTTCAACCATTCACT...TCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGTCGTCCTAAACAGTaGAATTTCCATTCTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGLQMIGTEELGLAEHKQGRPKQ*NFHSTQ Trigger: CTGGGTAGAATGGAAATTGCACTGTTTAGGACGACC...CTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CCA 90 bp | GGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGACTTCATACAGAATCTTaGCCAAACTACAGCGATGGA | + |
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Preference number: 4 (lower is better) Translates to: GLQMIGTEELGLAEHKQGLHTES*PNYSDG Trigger: TCCATCGCTGTAGTTTGGCCAAGATTCTGTATGAAG...TCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR TCA 90 bp | GGAGCCGAGGTAAGATATTTCCCTCCAGGACTCTGGTCAGTTTTACTTGCAAGTAGTGAATGGTTGAAATaGGGTTGGGACTCAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: GAEVRYFPPGLWSVLLASSEWLK*GWDSVV Trigger: AACTACTGAGTCCCAACCTCATTTCAACCATTCACT...ACTTGCAAGTAAAACTGACCAGAGTCCTGGAGGGAAATATCTTACCTCGGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CCA 90 bp | CATCTTCTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACCTTCATACAGAATCTTaGCCAAACTACAGCGATGGA | + |
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Preference number: 4 (lower is better) Translates to: HLLGLQMIGTEELGLAEHLHTES*PNYSDG Trigger: TCCATCGCTGTAGTTTGGCCAAGATTCTGTATGAAG...GTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAGAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CCA 90 bp | CATCTTCTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACGTTCTTCATCCCTCCTaGTCCAGACACAATCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: HLLGLQMIGTEELGLAEHVLHPS*SRHNLF Trigger: AAAAAGATTGTGTCTGGACCAGGAGGGATGAAGAAC...GTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAGAAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | ATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGAGCCGAGGTAAGATCTTCATACAGAATCTaGGCCAAACTACAGCGATGG | + |
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Preference number: 5 (lower is better) Translates to: IGTEELGLAEHKQGAEVRSSYRI*AKLQRW Trigger: CCATCGCTGTAGTTTGGCCAAGATTCTGTATGAAGA...TCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | CTTCTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGCGATGGATGATGTaGCCATCATTCACTACCAGA | + |
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Preference number: 5 (lower is better) Translates to: LLGLQMIGTEELGLAEHKQRWMM*PSFTTR Trigger: TCTGGTAGTGAATGATGGCAACATCATCCATCGCTG...CTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | GGAGCCGAGGTAAGATATTTCCCTCCAGGACTCTGGTCAGTTTTACTTGCAAGTTCTTCATACAGAATCTaGGCCAAACTACAGCGATGG | + |
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Preference number: 5 (lower is better) Translates to: GAEVRYFPPGLWSVLLASSSYRI*AKLQRW Trigger: CCATCGCTGTAGTTTGGCCAAGATTCTGTATGAAGA...ACTTGCAAGTAAAACTGACCAGAGTCCTGGAGGGAAATATCTTACCTCGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCCGAGGTAAGATATTTCCCTCCAGGACTCTGGTCAGTTTTACTTGCAAGTTTGATATGTTGAAGTaGCTTTCCACAAAAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GSRGKIFPSRTLVSFTCKFDMLK*LSTKAK Trigger: CTTGGCTTTTGTGGAAAGCAACTTCAACATATCAAA...CTTGCAAGTAAAACTGACCAGAGTCCTGGAGGGAAATATCTTACCTCGGCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | GGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACAAGCAGGGACAGACACAATCTTTTTaGCACAGTGAATGGTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GLQMIGTEELGLAEHKQGQTQSF*HSEWLK Trigger: TTTCAACCATTCACTGTGCAAAAAAGATTGTGTCTG...TCCCTGCTTGTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | GACAATGAAATAGTGAAGAATGTCCAAGGAGTACAGGGGTCCTGGAGTGACTCCTTTGATATGTTGAAGTaGCTTTCCACAAAAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: DNEIVKNVQGVQGSWSDSFDMLK*LSTKAK Trigger: CTTGGCTTTTGTGGAAAGCAACTTCAACATATCAAA...GGAGTCACTCCAGGACCCCTGTACTCCTTGGACATTCTTCACTATTTCATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS-3UTR CAA 90 bp | CATCTTCTTGGTTTACAAATGATAGGAACAGAGGAACTGGGCCTGGCTGAACACCAGACACAATCTTTTTaGCACAGTGAATGGTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: HLLGLQMIGTEELGLAEHQTQSF*HSEWLK Trigger: TTTCAACCATTCACTGTGCAAAAAAGATTGTGTCTG...GTGTTCAGCCAGGCCCAGTTCCTCTGTTCCTATCATTTGTAAACCAAGAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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| CDS CCA 72 bp | TCCTCTTCATACAGAATCTTGGCCAAACTACAGCGATaGATGATGTTGCCATCATTCACTACCAGAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSSYRILAKLQR*MMLPSFTTRRQ Trigger: CTGCCTTCTGGTAGTGAATGATGGCAACATCATCCATCGCTGTAGTTTGGCCAAGATTCTGTATGAAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021328.8 ENSMUST00000107014.8 |
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