Pregenerated sensors for LYZL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024233Ensembl transcript IDs: ENSMUST00000025076.10, ENSMUST00000120837.2
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TATCATGAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCATTCCCTCTCCAAGTCTaGGAAGGGGCACTGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: YHEIIMTSLNSGQREMTAFPLQV*EGALRE Trigger: TTCTCTCAGTGCCCCTTCTCAGACTTGGAGAGGGAA...TGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTCATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| 3UTR-3UTR TCA 90 bp | TATCATGAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCATCTGAGAAGGGGCACTaGGAGAAAGCGATACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: YHEIIMTSLNSGQREMTASEKGH*EKAILS Trigger: ACTGAGTATCGCTTTCTCTCAGTGCCCCTTCTCAGA...TGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTCATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| 3UTR TCA 72 bp | AGCTTAGATTCCCTCTCCAAGTCTGAGAAGGGGCACTaGGAGAAAGCGATACTCAGTACAAGTCTGACGGGT | + |
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Preference number: 3 (lower is better) Translates to: SLDSLSKSEKGH*EKAILSTSLTG Trigger: ACCCGTCAGACTTGTACTGAGTATCGCTTTCTCTCAGTGCCCCTTCTCAGACTTGGAGAGGGAATCTAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR GCA 90 bp | GATACTCAGTACAAGTCTGACGGGTCACGGAAAGCACCCTTGCACCTGCTGCAGAAATGCCATAGTCAGTaGTTCCATCCTCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: DTQYKSDGSRKAPLHLLQKCHSQ*FHPPGH Trigger: ATGTCCTGGAGGATGGAAGCACTGACTATGGCATTT...CTGCAGCAGGTGCAAGGGTGCTTTCCGTGACCCGTCAGACTTGTACTGAGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR GCA 90 bp | GATACTCAGTACAAGTCTGACGGGTCACGGAAAGCACCCTTGCACCTGCTGCAGTGTTTATCTGGAAAATaGCATAGTCAGTGCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: DTQYKSDGSRKAPLHLLQCLSGK*HSQCFH Trigger: ATGGAAGCACTGACTATGGCATTTTCCAGATAAACA...CTGCAGCAGGTGCAAGGGTGCTTTCCGTGACCCGTCAGACTTGTACTGAGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCTCTCCAAGTCTGAGAAGGGGCACTGAGAGAAAGCGATACTCAGTACAATCCTCTCTTCCACTCTaGCATGTCTTTGTTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: IPSPSLRRGTERKRYSVQSSLPL*HVFVLT Trigger: TGTGAGAACAAAGACATGTCAGAGTGGAAGAGAGGA...TTGTACTGAGTATCGCTTTCTCTCAGTGCCCCTTCTCAGACTTGGAGAGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR GCA 90 bp | ATTCCCTCTCCAAGTCTGAGAAGGGGCACTGAGAGAAAGCGATACTCAGTACAACTTCTGATGCTTTCTTaGATTTCTGCACCATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IPSPSLRRGTERKRYSVQLLMLS*ISAPCE Trigger: TTCACATGGTGCAGAAATGCAAGAAAGCATCAGAAG...TTGTACTGAGTATCGCTTTCTCTCAGTGCCCCTTCTCAGACTTGGAGAGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCTCTCCAAGTCTGAGAAGGGGCACTGAGAGAAAGCGATACTCAGTACAACATTTCTGCACCATGTaGAACTGTTTATCTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: IPSPSLRRGTERKRYSVQHFCTM*NCLSGK Trigger: TTTTCCAGATAAACAGTTTCACATGGTGCAGAAATG...TTGTACTGAGTATCGCTTTCTCTCAGTGCCCCTTCTCAGACTTGGAGAGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR TCA 90 bp | GAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCATGTAAATCCTCTCTTCCACTCTaGCATGTCTTTGTTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: EIIMTSLNSGQREMTACKSSLPL*HVFVLT Trigger: TGTGAGAACAAAGACATGTCAGAGTGGAAGAGAGGA...TTTACATGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR GCA 90 bp | GAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCATGTAAAAAATGCCATAGTCAGTaGTTCCATCCTCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: EIIMTSLNSGQREMTACKKCHSQ*FHPPGH Trigger: ATGTCCTGGAGGATGGAAGCACTGACTATGGCATTT...TTTACATGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR GCA 90 bp | TATCATGAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCAGTAGATTTTGGATTCTaGGACTATGCTGAAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YHEIIMTSLNSGQREMTAVDFGF*DYAEAD Trigger: ATCAGCTTCAGCATAGTCGCAGAATCCAAAATCTAC...TGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTCATGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025076.10 |
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| CDS-3UTR GCA 90 bp | TATCATGAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCACTTCTGATGCTTTCTTaGATTTCTGCACCATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: YHEIIMTSLNSGQREMTALLMLS*ISAPCE Trigger: TTCACATGGTGCAGAAATGCAAGAAAGCATCAGAAG...TGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTCATGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR TCA 90 bp | GAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCATGTAAACATTTCTGCACCATGTaGAACTGTTTATCTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: EIIMTSLNSGQREMTACKHFCTM*NCLSGK Trigger: TTTTCCAGATAAACAGTTTCACATGGTGCAGAAATG...TTTACATGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR GCA 90 bp | TATCATGAAATTATTATGACATCATTGAACTCAGGTCAGAGAGAAATGACGGCACTTTGCAAAGATTTTTaGCAGTTTACATCGAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: YHEIIMTSLNSGQREMTALCKDF*QFTSSV Trigger: TACACTCGATGTAAACTGGCAAAAATCTTTGCAAAG...TGCCGTCATTTCTCTCTGACCTGAGTTCAATGATGTCATAATAATTTCATGATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025076.10 |
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| CDS-3UTR CAA 90 bp | GATACTCAGTACAAGTCTGACGGGTCACGGAAAGCACCCTTGCACCTGCTGCAGCACTCTGACATGTCTTaGTTCTCACAGTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: DTQYKSDGSRKAPLHLLQHSDMS*FSQFFF Trigger: GAAGAAGAACTGTGAGAACAAAGACATGTCAGAGTG...CTGCAGCAGGTGCAAGGGTGCTTTCCGTGACCCGTCAGACTTGTACTGAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025076.10 ENSMUST00000120837.2 |
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| CDS-3UTR CAA 90 bp | GATACTCAGTACAAGTCTGACGGGTCACGGAAAGCACCCTTGCACCTGCTGCAGCCTTTGCAAAGATTTTaGCCAGTTTACATCGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: DTQYKSDGSRKAPLHLLQPLQRF*PVYIEC Trigger: ACACTCGATGTAAACTGGCAAAAATCTTTGCAAAGG...CTGCAGCAGGTGCAAGGGTGCTTTCCGTGACCCGTCAGACTTGTACTGAGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025076.10 |
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