Pregenerated sensors for LYZ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069516Ensembl transcript IDs: ENSMUST00000092163.9
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTTCCCGGCCCACCACAGAGGCTGTTCTAACTGGGTGCTGGGACTaGACAAAGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCA | + |
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Preference number: 1 (lower is better) Translates to: PSRPTTEAVLTGCWD*TKPCSSHDCCFPRS Trigger: TGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGTGCAGTCCCAGCACCCAGTTAGAACAGCCTCTGTGGTGGGCCGGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR GCA 90 bp | ACCACAGAGGCTGTTCTAACTGGGTGCTGGGACTGCACAAAGCCCTaGAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: TTEAVLTGCWDCTKP*SSHDCCFPRSTGLL Trigger: TAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGTGCAGTCCCAGCACCCAGTTAGAACAGCCTCTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR CCA 90 bp | CACAAAGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTaGTCTCCTATAAGCAGTTCTTGTATTTTTATTCACACAGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: HKALQLTRLLFPKIN*SPISSSCIFIHTGL Trigger: CAGACCTGTGTGAATAAAAATACAAGAACTGCTTATAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR TCA 90 bp | ATTAAGATGAATTCCAATGGAACTCAATGTGAATCACTTCCTGGCTaGAGAACTGACCTACAGAGGTGTCTGTGTGGTGATCATTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: IKMNSNGTQCESLPG*RTDLQRCLCGDHCV Trigger: AACACAATGATCACCACACAGACACCTCTGTAGGTCAGTTCTTCAGCCAGGAAGTGATTCACATTGAGTTCCATTGGAATTCATCTTAAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR TCA 90 bp | GCACAAAGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCCAGGGCTGTGCTGACTaGCAAGGGAGACTTTGCACA | + |
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Preference number: 2 (lower is better) Translates to: AQSPAAHTTAVSQDQLVSQGCAD*QGRLCT Trigger: TGTGCAAAGTCTCCCTTGTCAGTCAGCACAGCCCTG...GGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR TCA 90 bp | CACGGGTTCCCTGATAAGTTTCTGAGTTCAGACAATCTCAGTTCTCATCCACTGCGTCCAGGGCTGTGCTaGCTGACAAGGGAGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: HGFPDKFLSSDNLSSHPLRPGLC*LTRETL Trigger: CAAAGTCTCCCTTGTCAGTCAGCACAGCCCTGGACG...CAGTGGATGAGAACTGAGATTGTCTGAACTCAGAAACTTATCAGGGAACCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR TCA 90 bp | GCACAAAGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCCAATGGAACTCAATGTaGATCACTTCCTGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: AQSPAAHTTAVSQDQLVSQWNSM*ITSWLK Trigger: CTTCAGCCAGGAAGTGATTCACATTGAGTTCCATTG...GGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR TCA 90 bp | GAGACTTTGCACAACACAGCATCAGCTGAAGCTTGTGAGGAGGAAGTCTCTGTTTCTGCTGAAGTCCTGTaGCTTAGAGGGGAAATCGAG | + |
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Preference number: 2 (lower is better) Translates to: ETLHNTASAEACEEEVSVSAEVL*LRGEIE Trigger: CTCGATTTCCCCTCTAAGTCACAGGACTTCAGCAGA...AACAGAGACTTCCTCCTCACAAGCTTCAGCTGATGCTGTGTTGTGCAAAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGAAGAACTGACCTACAGAGGTGTCTGTGTGGTGATCATTGTGTTGGCTTATCTACTCCTACAGTaGGAAAGAGACCGAATGAGC | + |
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Preference number: 2 (lower is better) Translates to: LAEELTYRGVCVVIIVLAYLLLQ*ERDRMS Trigger: GCTCATTCGGTCTCTTTCTCACTGTAGGAGTAGATA...AGCCAACACAATGATCACCACACAGACACCTCTGTAGGTCAGTTCTTCAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR TCA 90 bp | GATAAGTTTCTGAGTTCAGACAATCTCAGTTCTCATCCACTGAGACTCCTGTGCGAATCACTTCCTGGCTaGAGAACTGACCTACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DKFLSSDNLSSHPLRLLCESLPG*RTDLQR Trigger: CCTCTGTAGGTCAGTTCTTCAGCCAGGAAGTGATTC...GCACAGGAGTCTCAGTGGATGAGAACTGAGATTGTCTGAACTCAGAAACTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR TCA 72 bp | TGGCTGACTGTCACCAGCGTCCAGGGCTGTGCTGACTaGCAAGGGAGACTTTGCACAACACAGCATCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: WLTVTSVQGCAD*QGRLCTTQHQL Trigger: CAGCTGATGCTGTGTTGTGCAAAGTCTCCCTTGTCAGTCAGCACAGCCCTGGACGCTGGTGACAGTCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR GCA 72 bp | TCAGACAATCTCAGTTCTCATCCACTGAGACTCCTGTaGCCTCAGAAACCTTCCCGGCCCACCACAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SDNLSSHPLRLL*PQKPSRPTTEA Trigger: AGCCTCTGTGGTGGGCCGGGAAGGTTTCTGAGGGCACAGGAGTCTCAGTGGATGAGAACTGAGATTGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR GCA 72 bp | GCTGTTCTAACTGGGTGCTGGGACTGCACAAAGCCCTaGAGCTCACACGACTGCTGTTTCCCAAGATCAACT | + |
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Preference number: 3 (lower is better) Translates to: AVLTGCWDCTKP*SSHDCCFPRST Trigger: AGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGTGCAGTCCCAGCACCCAGTTAGAACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCTACTGACAAGGGAGACTTaGCACAACACAGCATCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TKPCSSHDCCFPRSTGLLLTRET*HNTASA Trigger: AGCTGATGCTGTGTTGTGCAAAGTCTCCCTTGTCAG...TAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR TCA 72 bp | AATTCCAATGGAACTCAATGTGAATCACTTCCTGGCTaGAGAACTGACCTACAGAGGTGTCTGTGTGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: NSNGTQCESLPG*RTDLQRCLCGD Trigger: ATCACCACACAGACACCTCTGTAGGTCAGTTCTTCAGCCAGGAAGTGATTCACATTGAGTTCCATTGGAATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR CCA 72 bp | CTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTaGTCTCCTATAAGCAGTTCTTGTATTTTTATTCAC | + |
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Preference number: 3 (lower is better) Translates to: LQLTRLLFPKIN*SPISSSCIFIH Trigger: GTGAATAAAAATACAAGAACTGCTTATAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| 3UTR CCA 72 bp | TTGTACTTTTTCACTATGAGATTAGATTTGCTCCTGTaGTTATTTGCTGATACAGGCTCATCTGTCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LYFFTMRLDLLL*LFADTGSSVSE Trigger: CTCTGAGACAGATGAGCCTGTATCAGCAAATAACCACAGGAGCAAATCTAATCTCATAGTGAAAAAGTACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR TCA 90 bp | AGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCTATAAGCCTTGGCCTGAGCAGTaGCAGAAAGCAGGAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPAAHTTAVSQDQLVSYKPWPEQ*QKAGGV Trigger: GACTCCTCCTGCTTTCTGTCACTGCTCAGGCCAAGG...CTTATAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR TCA 90 bp | GAGACTTTGCACAACACAGCATCAGCTGAAGCTTGTGAGGAGGAAGTCTCTGTTGCAGAGCACTGCAATTaGTCCCACAGGCATTCACAG | + |
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Preference number: 4 (lower is better) Translates to: ETLHNTASAEACEEEVSVAEHCN*SHRHSQ Trigger: CTGTGAATGCCTGTGGGATCAATTGCAGTGCTCTGC...AACAGAGACTTCCTCCTCACAAGCTTCAGCTGATGCTGTGTTGTGCAAAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR GCA 90 bp | AGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCTATAAGATATCCCATAGTCAGTaGTTTGGTCTCCACGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SPAAHTTAVSQDQLVSYKISHSQ*FGLHGC Trigger: ACAACCGTGGAGACCAAAGCACTGACTATGGGATAT...CTTATAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR GCA 90 bp | TTTTTAAGCAAGATGAAAGGGGCAGCTCTAAGAAAGACAGGTCACGGGTTCCCTCAGCTCTTGGGGTTTTaGCATCATTACACCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: FLSKMKGAALRKTGHGFPQLLGF*HHYTSI Trigger: GATACTGGTGTAATGATGGCAAAACCCCAAGAGCTG...AGGGAACCCGTGACCTGTCTTTCTTAGAGCTGCCCCTTTCATCTTGCTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR CCA 90 bp | GATAAGTTTCTGAGTTCAGACAATCTCAGTTCTCATCCACTGAGACTCCTGTGCTCCTTTTCAGAGTTCTaGCAAACTCACAACGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: DKFLSSDNLSSHPLRLLCSFSEF*QTHNVH Trigger: ATGAACGTTGTGAGTTTGCCAGAACTCTGAAAAGGA...GCACAGGAGTCTCAGTGGATGAGAACTGAGATTGTCTGAACTCAGAAACTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS GCA 90 bp | CTGGGACAGATCTCGGTTTTGACAGTGTGCTCGCCATGCCACCCATaGTCGAATGCCTTGGGGATCTCTCACCACCCTCTTTGCACATTG | + |
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Preference number: 5 (lower is better) Translates to: LGQISVLTVCSPCHP*SNALGISHHPLCTL Trigger: CAATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGTCAAAACCGAGATCTGTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS GCA 90 bp | GATCTCGGTTTTGACAGTGTGCTCGCCATGCCACCCATGCTCGAATaGCTTGGGGATCTCTCACCACCCTCTTTGCACATTGTATGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DLGFDSVLAMPPMLE*LGDLSPPSLHIVWL Trigger: CAGCCATACAATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGTCAAAACCGAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS GCA 90 bp | CTCACCACCCTCTTTGCACATTGTATGGCTGCAGTGATGTCATCCTaGAGCAGAGCACTGCAATTGATCCCACAGGCATTCACAGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LTTLFAHCMAAVMSS*SRALQLIPQAFTAL Trigger: AAGAGCTGTGAATGCCTGTGGGATCAATTGCAGTGCTCTGCTGCAGGATGACATCACTGCAGCCATACAATGTGCAAAGAGGGTGGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS TCA 90 bp | TATAATTGCTCTCGTGCTGAGCTAAACACACCCAGTCGGCCAGGCTaGCTCCATAGTAGCCAGCCATTCCATTCCTTTTCAGAGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: YNCSRAELNTPSRPG*LHSSQPFHSFSEFW Trigger: CCAGAACTCTGAAAAGGAATGGAATGGCTGGCTACTATGGAGTCAGCCTGGCCGACTGGGTGTGTTTAGCTCAGCACGAGAGCAATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR CAA 90 bp | AGCCCTGCAGCTCACACGACTGCTGTTTCCCAAGATCAACTGGTCTCCTATAAGACAGCTCTTGGGGTTTaGCCATCATTACACCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: SPAAHTTAVSQDQLVSYKTALGV*PSLHQY Trigger: ATACTGGTGTAATGATGGCAAAACCCCAAGAGCTGT...CTTATAGGAGACCAGTTGATCTTGGGAAACAGCAGTCGTGTGAGCTGCAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CCA 90 bp | CTGCAGCAGAGCACTGCAATTGATCCCACAGGCATTCACAGCTCTTaGGGTTTTGCCATCATTACACCAGTATCGGCTATTGATCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LQQSTAIDPTGIHSS*GFAIITPVSAIDLK Trigger: TTTCAGATCAATAGCCGATACTGGTGTAATGATGGCAAAACCCCAAGAGCTGTGAATGCCTGTGGGATCAATTGCAGTGCTCTGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS-3UTR CAA 90 bp | CATCAGCTGAAGCTTGTGAGGAGGAAGTCTCTGTTTTGCCCTGTTTCTGCTGAAAGGCATTCACAGCTCTaGGGGTTTTGCCATCATTAC | + |
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Preference number: 5 (lower is better) Translates to: HQLKLVRRKSLFCPVSAERHSQL*GFCHHY Trigger: GTAATGATGGCAAAACCCCAAGAGCTGTGAATGCCT...TTCAGCAGAAACAGGGCAAAACAGAGACTTCCTCCTCACAAGCTTCAGCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS GCA 72 bp | ATCTCGGTTTTGACAGTGTGCTCGCCATGCCACCCATaGTCGAATGCCTTGGGGATCTCTCACCACCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ISVLTVCSPCHP*SNALGISHHPL Trigger: AAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGTCAAAACCGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS GCA 72 bp | CCGAATATACTGGGACAGATCTCGGTTTTGACAGTGTaGTCGCCATGCCACCCATGCTCGAATGCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PNILGQISVLTV*SPCHPCSNALG Trigger: CCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGTCAAAACCGAGATCTGTCCCAGTATATTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CCA 72 bp | CAGTGTGCTCGCCATGCCACCCATGCTCGAATGCCTTaGGGATCTCTCACCACCCTCTTTGCACATTGTATG | + |
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Preference number: 6 (lower is better) Translates to: QCARHATHARMP*GSLTTLFAHCM Trigger: CATACAATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CAA 90 bp | TCGGTTTTGACAGTGTGCTCGCCATGCCACCCATGCTCGAATGCCTaGGGGATCTCTCACCACCCTCTTTGCACATTGTATGGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SVLTVCSPCHPCSNA*GISHHPLCTLYGCS Trigger: ACTGCAGCCATACAATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGTCAAAACCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS GCA 72 bp | TTTGACAGTGTGCTCGCCATGCCACCCATGCTCGAATaGCTTGGGGATCTCTCACCACCCTCTTTGCACATT | + |
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Preference number: 6 (lower is better) Translates to: FDSVLAMPPMLE*LGDLSPPSLHI Trigger: AATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CAA 72 bp | ACAGTGTGCTCGCCATGCCACCCATGCTCGAATGCCTaGGGGATCTCTCACCACCCTCTTTGCACATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: TVCSPCHPCSNA*GISHHPLCTLY Trigger: ATACAATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGGGTGGCATGGCGAGCACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CAA 72 bp | GCTGCAGTGATGTCATCCTGCAGCAGAGCACTGCAATaGATCCCACAGGCATTCACAGCTCTTGGGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: AAVMSSCSRALQ*IPQAFTALGVL Trigger: CAAAACCCCAAGAGCTGTGAATGCCTGTGGGATCAATTGCAGTGCTCTGCTGCAGGATGACATCACTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CAA 90 bp | CCATGCTCGAATGCCTTGGGGATCTCTCACCACCCTCTTTGCACATaGTATGGCTGCAGTGATGTCATCCTGCAGCAGAGCACTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: PCSNALGISHHPLCT*YGCSDVILQQSTAI Trigger: AATTGCAGTGCTCTGCTGCAGGATGACATCACTGCAGCCATACAATGTGCAAAGAGGGTGGTGAGAGATCCCCAAGGCATTCGAGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CAA 90 bp | CATTGTATGGCTGCAGTGATGTCATCCTGCAGCAGAGCACTGCAATaGATCCCACAGGCATTCACAGCTCTTGGGGTTTTGCCATCATTA | + |
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Preference number: 6 (lower is better) Translates to: HCMAAVMSSCSRALQ*IPQAFTALGVLPSL Trigger: TAATGATGGCAAAACCCCAAGAGCTGTGAATGCCTGTGGGATCAATTGCAGTGCTCTGCTGCAGGATGACATCACTGCAGCCATACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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| CDS CCA 72 bp | CATAGTAGCCAGCCATTCCATTCCTTTTCAGAGTTCTaGCAAACTCACAACGTTCATAGACCTTGGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HSSQPFHSFSEF*QTHNVHRPWPE Trigger: CTCAGGCCAAGGTCTATGAACGTTGTGAGTTTGCCAGAACTCTGAAAAGGAATGGAATGGCTGGCTACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092163.9 |
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