Pregenerated sensors for LYVE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030787Ensembl transcript IDs: ENSMUST00000033050.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATaGCGGGCAAGTGCTTTACCACTGAGTCAGCTCCTGGGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GSVDSGDWTGSLVCT*RASALPLSQLLGSP Trigger: AGGAGAGCCCAGGAGCTGACTCAGTGGTAAAGCACTTGCCCGGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 90 bp | AGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTTGAACTATaGGGCTGGCCATGTCTCAGGGACTCTGGCCTTTCATGGGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: STARWCISLWEDFEL*GWPCLRDSGLSWGS Trigger: TGACCCCCATGAAAGGCCAGAGTCCCTGAGACATGGCCAGCCCCATAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 90 bp | GGAGCTGTTTTAGGACCTGGTACTTTGAAAGCTCCCTCTACTCTCTaGTCTGCTGTGAGCCACAGAAGGGTTAGGGAGGCTGTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: GAVLGPGTLKAPSTL*SAVSHRRVREAVGR Trigger: CCTTCCCACAGCCTCCCTAACCCTTCTGTGGCTCACAGCAGACCAGAGAGTAGAGGGAGCTTTCAAAGTACCAGGTCCTAAAACAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 90 bp | ACTCTGCAGTCTTTTTCTGCAGGAACTGACAGTGGCTTGCTTCTTTaGTTCCCGGGGCATGAAACTTGCCTCGTGTGCACCTTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: TLQSFSAGTDSGLLL*FPGHETCLVCTFST Trigger: AGTGGAGAAGGTGCACACGAGGCAAGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACTGTCAGTTCCTGCAGAAAAAGACTGCAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 90 bp | CTCCATGACCTTCTGTTGTTTTCCTTTCCTTATTTTACATGTGCCTaGTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LHDLLLFSFPYFTCA*FQRARPGGVFPCGK Trigger: CTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCACATGTAAAATAAGGAAAGGAAAACAACAGAAGGTCATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGGGGTCAGGCAACCTGGAAGCCTGTCTCTGAGTGTGAGCTTAGGAGCTGTTCTCTCTGGTCTGCTGTaGGCCACAGAAGGGTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: MGVRQPGSLSLSVSLGAVLSGLL*ATEGLG Trigger: CCCTAACCCTTCTGTGGCTCACAGCAGACCAGAGAG...AACAGCTCCTAAGCTCACACTCAGAGACAGGCTTCCAGGTTGCCTGACCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCTCTACTCTCTGGTCTGCTGTGAGCCACAGAAGGGTTAGGGAGGCTGTGGAGTCCAGAGAAGACTaGAGTAAGGAGAGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: APSTLWSAVSHRRVREAVESRED*SKERAP Trigger: AGGAGCCCTCTCCTTACTGCAGTCTTCTCTGGACTC...CACAGCCTCCCTAACCCTTCTGTGGCTCACAGCAGACCAGAGAGTAGAGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 90 bp | GTGTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTaGTACATGCCGGGCAAGTGCTTTACCACTGAGTCAGCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VCGVSGFWGLDWKPC*YMPGKCFTTESAPG Trigger: CCCAGGAGCTGACTCAGTGGTAAAGCACTTGCCCGGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGGTCAGGCAACCTGGAAGCCTGTCTCTGAGTGTGAGCTTAGGAGCTGTTGCTCCCTCTACTCTCTaGTCTGCTGTGAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: MGVRQPGSLSLSVSLGAVAPSTL*SAVSHR Trigger: TCTGTGGCTCACAGCAGACCAGAGAGTAGAGGGAGC...AACAGCTCCTAAGCTCACACTCAGAGACAGGCTTCCAGGTTGCCTGACCCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGGTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTGAACTGACAGTGGCTTaGTTCTTTGGTTCCCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: VPGSKEHGQVVYFPVGRFELTVA*FFGSRG Trigger: GCCCCGGGAACCAAAGAAGCAAGCCACTGTCAGTTC...AAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR TCA 90 bp | CTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTTTATTTTGGCTTTCCAGAGCCTGTGGGAAGATTTTaGACTATGGGGCTGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: LSVAPAPISCSVYFGFPEPVGRF*TMGLAM Trigger: CATGGCCAGCCCCATAGTTCAAAATCTTCCCACAGG...CTCTGGAAAGCCAAAATAAACAGAGCATGAGATGGGAGCTGGGGCCACAGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTCAGCCAACAAGGCTGCTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTTCCTTATTTTACATGTaGCTGGTTCCAAAGAGCACG | + |
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Preference number: 2 (lower is better) Translates to: VSANKAAICGPSSHLMLCSLFYM*LVPKST Trigger: CGTGCTCTTTGGAACCAGGCACATGTAAAATAAGGA...ACAGAGCATGAGATGGGAGCTGGGGCCACAGATAGCAGCCTTGTTGGCTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 90 bp | CCAGAGATTAAGTCTCAAGTCACCCAGGCTCTCCATGACCTTCTGTaGTTTTCCTTTCCTTATTTTACATGTGCCTGGTTCCAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: PEIKSQVTQALHDLL*FSFPYFTCAWFQRA Trigger: TGCTCTTTGGAACCAGGCACATGTAAAATAAGGAAAGGAAAACAACAGAAGGTCATGGAGAGCCTGGGTGACTTGAGACTTAATCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGCAACAGTAAAAAGAAAAGAAAGTCTGTCTACGTGCTGCAGATCAATTAGTGGCTTGCTTCTTTaGTTCCCGGGGCATGAAACT | + |
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Preference number: 2 (lower is better) Translates to: TPATVKRKESLSTCCRSISGLLL*FPGHET Trigger: AGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACT...AATTGATCTGCAGCACGTAGACAGACTTTCTTTTCTTTTTACTGTTGCTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR GCA 72 bp | GCCCCAGCCTGTATTTACAGTCTCAGCCAACAAGGCTaGTATCTGTGGCCCCAGCTCCCATCTCATGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: APACIYSLSQQG*YLWPQLPSHAL Trigger: CAGAGCATGAGATGGGAGCTGGGGCCACAGATAGCAGCCTTGTTGGCTGAGACTGTAAATACAGGCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR-3UTR CAA 90 bp | CGGGCAAGTGCTTTACCACTGAGTCAGCTCCTGGGCTCTCCTGCTTTTAGGTTTGGAACTGACAGTGGCTaGCTTCTTTGGTTCCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: RASALPLSQLLGSPAFRFGTDSG*LLWFPG Trigger: CCCCGGGAACCAAAGAAGCAAGCCACTGTCAGTTCC...AAACCTAAAAGCAGGAGAGCCCAGGAGCTGACTCAGTGGTAAAGCACTTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR TCA 72 bp | CACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTTaGACTATGGGGCTGGCCATGTCTCAGGGACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: HGQVVYFPVGRF*TMGLAMSQGLW Trigger: CCAGAGTCCCTGAGACATGGCCAGCCCCATAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR GCA 72 bp | AAGGTTGGAGGCCAGAGGGTAGAGTCCAGAGAAGACTaGAGTAAGGAGAGGGCTCCTTCTGGTGAACTCTGC | + |
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Preference number: 3 (lower is better) Translates to: KVGGQRVESRED*SKERAPSGELC Trigger: GCAGAGTTCACCAGAAGGAGCCCTCTCCTTACTGCAGTCTTCTCTGGACTCTACCCTCTGGCCTCCAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR GCA 72 bp | CTCTGCAGTCTTTTTCTGCAGGAACTGACAGTGGCTTaGTTCTTTGGTTCCCGGGGCATGAAACTTGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: LCSLFLQELTVA*FFGSRGMKLAS Trigger: CGAGGCAAGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACTGTCAGTTCCTGCAGAAAAAGACTGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR GCA 72 bp | GACTGCAGTAAGGAGAGGGCTCCTTCTGGTGAACTCTaGAGTCTTTTTCTGCAGGAACTGACAGTGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: DCSKERAPSGEL*SLFLQELTVAC Trigger: GCAAGCCACTGTCAGTTCCTGCAGAAAAAGACTGCAGAGTTCACCAGAAGGAGCCCTCTCCTTACTGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | TCTTTTTCTGCAGGAACTGACAGTGGCTTGCTTCTTTaGTTCCCGGGGCATGAAACTTGCCTCGTGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: SFSAGTDSGLLL*FPGHETCLVCT Trigger: GGTGCACACGAGGCAAGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACTGTCAGTTCCTGCAGAAAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | TTAGGACCTGGTACTTTGAAAGCTCCCTCTACTCTCTaGTCTGCTGTGAGCCACAGAAGGGTTAGGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LGPGTLKAPSTL*SAVSHRRVREA Trigger: AGCCTCCCTAACCCTTCTGTGGCTCACAGCAGACCAGAGAGTAGAGGGAGCTTTCAAAGTACCAGGTCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | GTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTaGGAAGATTTTGAACTATGGGGCTGGCCATGTCTC | + |
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Preference number: 3 (lower is better) Translates to: VPKSTARWCISL*EDFELWGWPCL Trigger: GAGACATGGCCAGCCCCATAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | AGGTGGTGTATTTCCCTGTGGGAAGATTTTGAACTATaGGGCTGGCCATGTCTCAGGGACTCTGGCCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: RWCISLWEDFEL*GWPCLRDSGLS Trigger: TGAAAGGCCAGAGTCCCTGAGACATGGCCAGCCCCATAGTTCAAAATCTTCCCACAGGGAAATACACCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | TTCTTTGTGTGTGTGGGGTCAGTGGATTCTGGGGATTaGACTGGAAGCCTTGTTTGTACATGCCGGGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: FFVCVGSVDSGD*TGSLVCTCRAS Trigger: ACTTGCCCGGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACACACACAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | GTCTCTGAGTGTGAGCTTAGGAGCTGTTTTAGGACCTaGTACTTTGAAAGCTCCCTCTACTCTCTGGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: VSECELRSCFRT*YFESSLYSLVC Trigger: GCAGACCAGAGAGTAGAGGGAGCTTTCAAAGTACCAGGTCCTAAAACAGCTCCTAAGCTCACACTCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CCA 72 bp | TTTTACATGTGCCTGGTTCCAAAGAGCACGGCCAGGTaGTGTATTTCCCTGTGGGAAGATTTTGAACTATGG | + |
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Preference number: 3 (lower is better) Translates to: FYMCLVPKSTAR*CISLWEDFELW Trigger: CCATAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCACATGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR GCA 72 bp | CCAGCAACAGTAAAAAGAAAAGAAAGTCTGTCTACGTaGTGCAGATCAATTAACCGAGAGGCTTCTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PATVKRKESLST*CRSINREASQP Trigger: GGGCTGAGAAGCCTCTCGGTTAATTGATCTGCAGCACGTAGACAGACTTTCTTTTCTTTTTACTGTTGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR TCA 90 bp | TGGGGCTGGCCATGTCTCAGGGACTCTGGCCTTTCATGGGGGTCAGGCAACCTGCCCACACCTGGGGTTTaGGAAAATCCGAGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: WGWPCLRDSGLSWGSGNLPTPGV*ENPRDD Trigger: GTCATCCCTCGGATTTTCTCAAACCCCAGGTGTGGG...CAGGTTGCCTGACCCCCATGAAAGGCCAGAGTCCCTGAGACATGGCCAGCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | GTCTCAGCCAACAAGGCTGCTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTGTGGAGCCCGGGTGGTaGCAGAAACAGGTGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: VSANKAAICGPSSHLMLCVEPGW*QKQVLW Trigger: CCACAACACCTGTTTCTGCCACCACCCGGGCTCCAC...ACAGAGCATGAGATGGGAGCTGGGGCCACAGATAGCAGCCTTGTTGGCTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | GTGCCTGGTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTGCACCAGCAGGGCGGTaGGGACACCTCCAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: VPGSKEHGQVVYFPVGRFAPAGR*GHLQTQ Trigger: CTGGGTTTGGAGGTGTCCCCACCGCCCTGCTGGTGC...AAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR TCA 90 bp | GTCTCAGCCAACAAGGCTGCTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTGCCAGATTTCTGCGCTaGCTCTACCTGGTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VSANKAAICGPSSHLMLCARFLR*LYLVPA Trigger: AGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGC...ACAGAGCATGAGATGGGAGCTGGGGCCACAGATAGCAGCCTTGTTGGCTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | CTGACAGTGGCTTGCTTCTTTGGTTCCCGGGGCATGAAACTTGCCTCGTGTGCACATGGAGGTCAAAGGTaGAGCCCGGGTGGTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LTVACFFGSRGMKLASCAHGGQR*SPGGGR Trigger: TCTGCCACCACCCGGGCTCCACCTTTGACCTCCATG...TGCACACGAGGCAAGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | GCTCCCTCTACTCTCTGGTCTGCTGTGAGCCACAGAAGGGTTAGGGAGGCTGTGGTGGGTTTTTGTTTCTaGCCACAAGGGCAACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: APSTLWSAVSHRRVREAVVGFCF*PQGQRP Trigger: TGGGCGTTGCCCTTGTGGGCAGAAACAAAAACCCAC...CACAGCCTCCCTAACCCTTCTGTGGCTCACAGCAGACCAGAGAGTAGAGGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 72 bp | GCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTaGAACTATGGGGCTGGCCATGTCTCAGGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: ARPGGVFPCGKI*NYGAGHVSGTL Trigger: CAGAGTCCCTGAGACATGGCCAGCCCCATAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | TTACATGTGCCTGGTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGACACCGTAGTTTTGGGTaGACTCTTGGCCTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHVPGSKEHGQVVYFPVGHRSFG*TLGLLW Trigger: CCAGAGGAGGCCAAGAGTCCACCCAAAACTACGGTG...TCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCACATGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR TCA 90 bp | GCTCCCTCTACTCTCTGGTCTGCTGTGAGCCACAGAAGGGTTAGGGAGGCTGTGGTTGATTCTTGGTTGTaGAAGGGAAGGCCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: APSTLWSAVSHRRVREAVVDSWL*KGRPSH Trigger: ATGTGAAGGCCTTCCCTTTCACAACCAAGAATCAAC...CACAGCCTCCCTAACCCTTCTGTGGCTCACAGCAGACCAGAGAGTAGAGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | CTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTTTATTTTGGCTTTCCAGAGACTCTACCTGGTCCCTaGTGGCCAGAGTCAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSVAPAPISCSVYFGFPETLPGP*WPESVP Trigger: TGGGACTGACTCTGGCCAGCAGGGACCAGGTAGAGT...CTCTGGAAAGCCAAAATAAACAGAGCATGAGATGGGAGCTGGGGCCACAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | GTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATGCCTCAAAGCCAGATTTCTaGGCTGACTCTACCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VWGQWILGIGLEALFVHASKPDF*ADSTWS Trigger: GGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTGA...GGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | GTCTCAGCCAACAAGGCTGCTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTGACAGAAAACTCTGTTaGGGGTGTTTGAGTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VSANKAAICGPSSHLMLCDRKLC*GCLSVQ Trigger: TTGGACACTCAAACACCCGCAACAGAGTTTTCTGTC...ACAGAGCATGAGATGGGAGCTGGGGCCACAGATAGCAGCCTTGTTGGCTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | GTGCCTGGTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTCAGAAACAGGTGTTGTaGAGTCAGGGGATGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VPGSKEHGQVVYFPVGRFQKQVL*SQGMKP Trigger: TGGCTTCATCCCCTGACTCCACAACACCTGTTTCTG...AAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | CGGGCAAGTGCTTTACCACTGAGTCAGCTCCTGGGCTCTCCTGCTTTTAGGTTTCATTCTTCCCACACCTaGGGTTTGAGAAAATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RASALPLSQLLGSPAFRFHSSHT*GLRKSE Trigger: CTCGGATTTTCTCAAACCCCAGGTGTGGGAAGAATG...AAACCTAAAAGCAGGAGAGCCCAGGAGCTGACTCAGTGGTAAAGCACTTGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 72 bp | ACTCTGCAGTCTTTTTCTGCAGGAACTGACAGTGGCTaGCTTCTTTGGTTCCCGGGGCATGAAACTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLQSFSAGTDSG*LLWFPGHETCL Trigger: GAGGCAAGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACTGTCAGTTCCTGCAGAAAAAGACTGCAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 72 bp | GTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTaGTACATGCCGGGCAAGTGCTTTACCACTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VSGFWGLDWKPC*YMPGKCFTTES Trigger: TGACTCAGTGGTAAAGCACTTGCCCGGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 72 bp | TTTCTTTGTGTGTGTGGGGTCAGTGGATTCTGGGGATaGGACTGGAAGCCTTGTTTGTACATGCCGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: FLCVCGVSGFWG*DWKPCLYMPGK Trigger: CTTGCCCGGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACACACACAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATAACCCAGGTGTCGGATaGGTTGTGGCAATAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CVWGQWILGIGLEALFVHNPGVG*VVAIGF Trigger: AAAGCCTATTGCCACAACTCATCCGACACCTGGGTT...ATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | CTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTTTATTTTGGCTTTCCAGAGACCTCCAAACCCAGCTaGTTCGTTCTTGAATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSVAPAPISCSVYFGFPETSKPS*FVLECC Trigger: GCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGT...CTCTGGAAAGCCAAAATAAACAGAGCATGAGATGGGAGCTGGGGCCACAGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | CTATCTGTGGCCCCAGCTCCCATCTCATGCTCTGTTTATTTTGGCTTTCCAGAGAAATCAGGACACCTTTaGCATTCTTCCCACACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSVAPAPISCSVYFGFPEKSGHL*HSSHTW Trigger: CCAGGTGTGGGAAGAATGGCAAAGGTGTCCTGATTT...CTCTGGAAAGCCAAAATAAACAGAGCATGAGATGGGAGCTGGGGCCACAGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR GCA 90 bp | CTGACAGTGGCTTGCTTCTTTGGTTCCCGGGGCATGAAACTTGCCTCGTGTGCATCCACTTGCAACAAATaGTTCTGTTTCTGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LTVACFFGSRGMKLASCASTCNK*FCFCSH Trigger: ATGGCTACAGAAACAGAAGCATTTGTTGCAAGTGGA...TGCACACGAGGCAAGTTTCATGCCCCGGGAACCAAAGAAGCAAGCCACTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | TTACATGTGCCTGGTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGATGTGAAATTCATCTGTaGGTTTTTGTTTCTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHVPGSKEHGQVVYFPVGCEIHL*VFVSAH Trigger: GTGGGCAGAAACAAAAACCCACAGATGAATTTCACA...TCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAACCAGGCACATGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATGCCACTCTTGGCCTCCTCTaGGTTTTTAATGGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VWGQWILGIGLEALFVHATLGLL*VFNGFL Trigger: AAGAAAACCATTAAAAACCCAGAGGAGGCCAAGAGT...GGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR TCA 90 bp | GTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTTGAACTACCTCGTTGGCTTCTGTaGAATTCATCTGTGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VPKSTARWCISLWEDFELPRWLL*NSSVGF Trigger: AAAACCCACAGATGAATTTCACAGAAGCCAACGAGG...TAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CCA 90 bp | AACACCAGCAACAGTAAAAAGAAAAGAAAGTCTGTCTACGTGCTGCAGATCAATCTTCCTTTACAACCTTaGTTTCGATCATTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NTSNSKKKRKSVYVLQINLPLQP*FRSFPS Trigger: AGAAGGAAATGATCGAAACCAAGGTTGTAAAGGAAG...ATTGATCTGCAGCACGTAGACAGACTTTCTTTTCTTTTTACTGTTGCTGGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| 3UTR CAA 72 bp | GGCTCTCCTGCTTTTAGGTTTCTTATAAACGTGTATTaGTCTCTAGAGAACACCAGCAACAGTAAAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GSPAFRFLINVY*SLENTSNSKKK Trigger: TTTCTTTTTACTGTTGCTGGTGTTCTCTAGAGACAAATACACGTTTATAAGAAACCTAAAAGCAGGAGAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 90 bp | TGGAGCCCGGGTGGTGGCAGAAACAGGTGTTGTGGAGTCAGGGGATaGAGCCAAGTAGGCGCTGCTGCTGACAGAAAACTCTGTTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: WSPGGGRNRCCGVRG*SQVGAAADRKLCCG Trigger: CCCGCAACAGAGTTTTCTGTCAGCAGCAGCGCCTACTTGGCTTCATCCCCTGACTCCACAACACCTGTTTCTGCCACCACCCGGGCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 90 bp | TGCAAGTCTCAAAGCCAGATTTCTGCGCTGACTCTACCTGGTCCCTaGTGGCCAGAGTCAGTCCCAGCATCTTACAGGCCTCGTTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: CKSQSQISALTLPGP*WPESVPASYRPRWL Trigger: AAGCCAACGAGGCCTGTAAGATGCTGGGACTGACTCTGGCCAGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTGAGACTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CCA 90 bp | AAGTCTCAAAGCCAGATTTCTGCGCTGACTCTACCTGGTCCCTGCTaGCCAGAGTCAGTCCCAGCATCTTACAGGCCTCGTTGGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KSQSQISALTLPGPC*PESVPASYRPRWLL Trigger: CAGAAGCCAACGAGGCCTGTAAGATGCTGGGACTGACTCTGGCCAGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTGAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CCA 90 bp | TTTTTGTCTTCCGTGCCATGGAGGTCAAAGGTGGAGCCCGGGTGGTaGCAGAAACAGGTGTTGTGGAGTCAGGGGATGAAGCCAAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: FLSSVPWRSKVEPGW*QKQVLWSQGMKPSR Trigger: CCTACTTGGCTTCATCCCCTGACTCCACAACACCTGTTTCTGCCACCACCCGGGCTCCACCTTTGACCTCCATGGCACGGAAGACAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 90 bp | TCCAACCCATCCATAGCTGCAAGTCTCAAAGCCAGATTTCTGCGCTaGCTCTACCTGGTCCCTGCTGGCCAGAGTCAGTCCCAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SNPSIAASLKARFLR*LYLVPAGQSQSQHL Trigger: AAGATGCTGGGACTGACTCTGGCCAGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTGAGACTTGCAGCTATGGATGGGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 90 bp | GTAGAAATGGAAAGGTCTTGCACGAGGTCGGCACCTTGGACTGGGTaGCTAGTGGTCCAAATAGAGGCGAGGAGTAACACCAGGCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: VEMERSCTRSAPWTG*LVVQIEARSNTRLV Trigger: CACTAGCCTGGTGTTACTCCTCGCCTCTATTTGGACCACTAGGCACCCAGTCCAAGGTGCCGACCTCGTGCAAGACCTTTCCATTTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 90 bp | CAGGGCGGTGGGGACACCTCCAAACCCAGCTGCTTCGTTCTTGAATaGTGCTCCACTTGCAACAAATGCTTCTGTTTCTGTAGCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: QGGGDTSKPSCFVLE*CSTCNKCFCFCSHG Trigger: ACCATGGCTACAGAAACAGAAGCATTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTCCCCACCGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATGCCTGGCAGAAACAGGTGTaGTGGAGTCAGGGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: VWGQWILGIGLEALFVHAWQKQV*WSQGMK Trigger: CTTCATCCCCTGACTCCACAACACCTGTTTCTGCCA...GGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATGCCCAAATCAGGACACCTTaGCCATTCTTCCCACACCTG | + |
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Preference number: 5 (lower is better) Translates to: VWGQWILGIGLEALFVHAQIRTP*PFFPHL Trigger: CAGGTGTGGGAAGAATGGCAAAGGTGTCCTGATTTG...GGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATGCCGTTTTGGGTGGACTCTaGGCCTCCTCTGGGTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: VWGQWILGIGLEALFVHAVLGGL*ASSGFL Trigger: TAAAAACCCAGAGGAGGCCAAGAGTCCACCCAAAAC...GGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | GTTCCAAAGAGCACGGCCAGGTGGTGTATTTCCCTGTGGGAAGATTTTGAACTACATCGCACCGTAGTTTaGGGTGGACTCTTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VPKSTARWCISLWEDFELHRTVV*GGLLAS Trigger: GGAGGCCAAGAGTCCACCCAAAACTACGGTGCGATG...TAGTTCAAAATCTTCCCACAGGGAAATACACCACCTGGCCGTGCTCTTTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATGCCTTCATCTGTGGGTTTTaGTTTCTGCCCACAAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VWGQWILGIGLEALFVHAFICGF*FLPTRA Trigger: TGCCCTTGTGGGCAGAAACAAAAACCCACAGATGAA...GGCATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 90 bp | ATTCCAAATCAGGACACCTTTGCCATTCTTCCCACACCTGGGGTTTaGGAAAATCCGAGGGATGACAGAGAACTGTTCTCCAACCCATCC | + |
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Preference number: 5 (lower is better) Translates to: IPNQDTFAILPTPGV*ENPRDDRELFSNPS Trigger: GGATGGGTTGGAGAACAGTTCTCTGTCATCCCTCGGATTTTCTCAAACCCCAGGTGTGGGAAGAATGGCAAAGGTGTCCTGATTTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGGGGTCAGTGGATTCTGGGGATTGGACTGGAAGCCTTGTTTGTACATATAGGCTTTGAACTTTaGGCTGGAGGGAGCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: CVWGQWILGIGLEALFVHIGFEL*AGGSIP Trigger: TGGAATGCTCCCTCCAGCCAAAAGTTCAAAGCCTAT...ATGTACAAACAAGGCTTCCAGTCCAATCCCCAGAATCCACTGACCCCACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS-3UTR CAA 90 bp | ATGGGGGTCAGGCAACCTGGAAGCCTGTCTCTGAGTGTGAGCTTAGGAGCTGTTTCTTCCTTTACAACCTaGGTTTCGATCATTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: MGVRQPGSLSLSVSLGAVSSFTT*VSIISF Trigger: GAAGGAAATGATCGAAACCAAGGTTGTAAAGGAAGA...AACAGCTCCTAAGCTCACACTCAGAGACAGGCTTCCAGGTTGCCTGACCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 90 bp | TGTGGTAACGATTTCTGGAATGCAGGAGTTAACCCAGGTGTCGGATaGGTTGTGGCAATAGGCTTTGAACTTTTGGCTGGAGGGAGCATT | + |
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Preference number: 5 (lower is better) Translates to: CGNDFWNAGVNPGVG*VVAIGFELLAGGSI Trigger: AATGCTCCCTCCAGCCAAAAGTTCAAAGCCTATTGCCACAACTCATCCGACACCTGGGTTAACTCCTGCATTCCAGAAATCGTTACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 90 bp | GACACCTCCAAACCCAGCTGCTTCGTTCTTGAATGCTGCTCCACTTaGAACAAATGCTTCTGTTTCTGTAGCCATGGTGATAGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: DTSKPSCFVLECCST*NKCFCFCSHGDRFC Trigger: ACAGAACCTATCACCATGGCTACAGAAACAGAAGCATTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 90 bp | TTACAACCTTGGTTTCGATCATTTCCTTCTGTTGATTCTTGGTTGTaGAAGGGAAGGCCTTCACATACCTTTTCACGTAGCAAACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LQPWFRSFPSVDSWL*KGRPSHTFSRSKQP Trigger: TGGCTGTTTGCTACGTGAAAAGGTATGTGAAGGCCTTCCCTTTCACAACCAAGAATCAACAGAAGGAAATGATCGAAACCAAGGTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CCA 72 bp | AAGGTGGAGCCCGGGTGGTGGCAGAAACAGGTGTTGTaGAGTCAGGGGATGAAGCCAAGTAGGCGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KVEPGWWQKQVL*SQGMKPSRRCC Trigger: GCAGCAGCGCCTACTTGGCTTCATCCCCTGACTCCACAACACCTGTTTCTGCCACCACCCGGGCTCCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CCA 72 bp | TCCGTGCCATGGAGGTCAAAGGTGGAGCCCGGGTGGTaGCAGAAACAGGTGTTGTGGAGTCAGGGGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVPWRSKVEPGW*QKQVLWSQGMK Trigger: CTTCATCCCCTGACTCCACAACACCTGTTTCTGCCACCACCCGGGCTCCACCTTTGACCTCCATGGCACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 72 bp | CAAAGCCAGATTTCTGCGCTGACTCTACCTGGTCCCTaGTGGCCAGAGTCAGTCCCAGCATCTTACAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QSQISALTLPGP*WPESVPASYRP Trigger: AGGCCTGTAAGATGCTGGGACTGACTCTGGCCAGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 72 bp | CACCAGCAGGGCGGTGGGGACACCTCCAAACCCAGCTaGTTCGTTCTTGAATGCTGCTCCACTTGCAACAAA | + |
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Preference number: 6 (lower is better) Translates to: HQQGGGDTSKPS*FVLECCSTCNK Trigger: TTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTCCCCACCGCCCTGCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 72 bp | TCCATAGCTGCAAGTCTCAAAGCCAGATTTCTGCGCTaGCTCTACCTGGTCCCTGCTGGCCAGAGTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SIAASLKARFLR*LYLVPAGQSQS Trigger: GGACTGACTCTGGCCAGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTGAGACTTGCAGCTATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 72 bp | GGTGGTGGCAGAAACAGGTGTTGTGGAGTCAGGGGATaGAGCCAAGTAGGCGCTGCTGCTGACAGAAAACTC | + |
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Preference number: 6 (lower is better) Translates to: GGGRNRCCGVRG*SQVGAAADRKL Trigger: GAGTTTTCTGTCAGCAGCAGCGCCTACTTGGCTTCATCCCCTGACTCCACAACACCTGTTTCTGCCACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CAA 90 bp | ACCAGCAGGGCGGTGGGGACACCTCCAAACCCAGCTGCTTCGTTCTaGAATGCTGCTCCACTTGCAACAAATGCTTCTGTTTCTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSRAVGTPPNPAASF*NAAPLATNASVSVA Trigger: GGCTACAGAAACAGAAGCATTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTCCCCACCGCCCTGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 72 bp | TGGAGTCAGGGGATGAAGCCAAGTAGGCGCTGCTGCTaGCAGAAAACTCTGTTGCGGGTGTTTGAGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WSQGMKPSRRCC*QKTLLRVFECP Trigger: TGGACACTCAAACACCCGCAACAGAGTTTTCTGTCAGCAGCAGCGCCTACTTGGCTTCATCCCCTGACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 72 bp | ACGCCCATGATTCTGCATGTAGAAATGGAAAGGTCTTaGACGAGGTCGGCACCTTGGACTGGGTGCCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: TPMILHVEMERS*TRSAPWTGCLV Trigger: CACTAGGCACCCAGTCCAAGGTGCCGACCTCGTGCAAGACCTTTCCATTTCTACATGCAGAATCATGGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CCA 72 bp | CAAGTCTCAAAGCCAGATTTCTGCGCTGACTCTACCTaGTCCCTGCTGGCCAGAGTCAGTCCCAGCATCTTA | + |
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Preference number: 6 (lower is better) Translates to: QVSKPDFCADST*SLLARVSPSIL Trigger: TAAGATGCTGGGACTGACTCTGGCCAGCAGGGACCAGGTAGAGTCAGCGCAGAAATCTGGCTTTGAGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CAA 72 bp | AACGCCCATGATTCTGCATGTAGAAATGGAAAGGTCTaGCACGAGGTCGGCACCTTGGACTGGGTGCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: NAHDSACRNGKV*HEVGTLDWVPS Trigger: ACTAGGCACCCAGTCCAAGGTGCCGACCTCGTGCAAGACCTTTCCATTTCTACATGCAGAATCATGGGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CAA 72 bp | GCGGTGGGGACACCTCCAAACCCAGCTGCTTCGTTCTaGAATGCTGCTCCACTTGCAACAAATGCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AVGTPPNPAASF*NAAPLATNASV Trigger: AACAGAAGCATTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTCCCCACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 72 bp | CGGTGGGGACACCTCCAAACCCAGCTGCTTCGTTCTTaGATGCTGCTCCACTTGCAACAAATGCTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RWGHLQTQLLRS*MLLHLQQMLLF Trigger: AAACAGAAGCATTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTCCCCACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 72 bp | TTTGGCTGGAGGGAGCATTCCAAATCAGGACACCTTTaGCATTCTTCCCACACCTGGGGTTTGAGAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: FGWREHSKSGHL*HSSHTWGLRKS Trigger: GGATTTTCTCAAACCCCAGGTGTGGGAAGAATGGCAAAGGTGTCCTGATTTGGAATGCTCCCTCCAGCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS GCA 72 bp | GGGGACACCTCCAAACCCAGCTGCTTCGTTCTTGAATaGTGCTCCACTTGCAACAAATGCTTCTGTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GDTSKPSCFVLE*CSTCNKCFCFC Trigger: ACAGAAACAGAAGCATTTGTTGCAAGTGGAGCAGCATTCAAGAACGAAGCAGCTGGGTTTGGAGGTGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS TCA 72 bp | TCAGTCCCAGCATCTTACAGGCCTCGTTGGCTTCTGTaGAATTCATCTGTGGGTTTTTGTTTCTGCCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SVPASYRPRWLL*NSSVGFCFCPQ Trigger: TTGTGGGCAGAAACAAAAACCCACAGATGAATTTCACAGAAGCCAACGAGGCCTGTAAGATGCTGGGACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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| CDS CAA 90 bp | GCCTCCTCTGGGTTTTTAATGGTTTTCTTTGATTCTTCATTAGCGTaGACGTCATCAGCCTTCTCTTCCTTTACAACCTTGGTTTCGATC | + |
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Preference number: 6 (lower is better) Translates to: ASSGFLMVFFDSSLA*TSSAFSSFTTLVSI Trigger: GATCGAAACCAAGGTTGTAAAGGAAGAGAAGGCTGATGACGTCAACGCTAATGAAGAATCAAAGAAAACCATTAAAAACCCAGAGGAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033050.5 |
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