Pregenerated sensors for LYRM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030922

Ensembl transcript IDs: ENSMUST00000054440.11, ENSMUST00000106516.2, ENSMUST00000106517.9, ENSMUST00000106518.9, ENSMUST00000207270.2, ENSMUST00000208202.2, ENSMUST00000208424.2

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	AGTGGCCAAGGTTGTGGCTCCCAAACGGGAGCGACTGAGGGAGGCTaGGGGGAAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACG	+
Preference number: 1 (lower is better) Translates to: SGQGCGSQTGATEGG*GEAGDPNAKTEPET Trigger: CGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTCCCCTCAGCCTCCCTCAGTCGCTCCCGTTTGGGAGCCACAACCTTGGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	AAGAAGCAAAGCCATCCATCAGGCCACAAAGACACAGAAAGGGAGTaGGGCAGGAAGAAGCGAGACAGAAGCATGCGTGTGCGCGTGCAC	+
Preference number: 1 (lower is better) Translates to: KKQSHPSGHKDTERE*GRKKRDRSMRVRVH Trigger: GTGCACGCGCACACGCATGCTTCTGTCTCGCTTCTTCCTGCCTCACTCCCTTTCTGTGTCTTTGTGGCCTGATGGATGGCTTTGCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	AGCAAGCTCCAGGGATCCTCCTGTCTATGTCTGCTTCCTCAACTGTaGGTGAGGGCTACAGGTGTGCCCTACCTTACCCAGCTCTTGACA	+
Preference number: 1 (lower is better) Translates to: SKLQGSSCLCLLPQL*VRATGVPYLTQLLT Trigger: TGTCAAGAGCTGGGTAAGGTAGGGCACACCTGTAGCCCTCACTCACAGTTGAGGAAGCAGACATAGACAGGAGGATCCCTGGAGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 90 bp	ACCGTGGCTTACCTGGGTGCCTTCACGGTGGATTATCGGGCCCAATaGCAAAATGAATGGTTGGTTTCCTGTAAGGACAAGGTCATCCCA	+
Preference number: 1 (lower is better) Translates to: TVAYLGAFTVDYRAQ*QNEWLVSCKDKVIP Trigger: TGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCACCCAGGTAAGCCACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	CTGGGTGCCTTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATaGTTGGTTTCCTGTAAGGACAAGGTCATCCCAGGCTCCGTTGAT	+
Preference number: 1 (lower is better) Translates to: LGAFTVDYRAQCQNE*LVSCKDKVIPGSVD Trigger: ATCAACGGAGCCTGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	GAGAAAGGATCTCACCAAAACGAGAGTTTACCAATTCAGCTGGACTaGCAGGCCAGCAAGCTCCAGGGATCCTCCTGTCTATGTCTGCTT	+
Preference number: 1 (lower is better) Translates to: EKGSHQNESLPIQLD*QASKLQGSSCLCLL Trigger: AAGCAGACATAGACAGGAGGATCCCTGGAGCTTGCTGGCCTGCCAGTCCAGCTGAATTGGTAAACTCTCGTTTTGGTGAGATCCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	CTCACAACTATGATCCCAGCACTGCACTGTGGAGGACTGGGAGTCTaGGATCAGCCTGGGCTACATAATGAGAAGTTCTCAAAAGAGAGC	+
Preference number: 1 (lower is better) Translates to: LTTMIPALHCGGLGV*DQPGLHNEKFSKES Trigger: GCTCTCTTTTGAGAACTTCTCATTATGTAGCCCAGGCTGATCTCAGACTCCCAGTCCTCCACAGTGCAGTGCTGGGATCATAGTTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	CCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGATGCCTTTATTaGACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGA	+
Preference number: 1 (lower is better) Translates to: PCLVGKRWRRAGCLY*THLAEGNIQTAGGG Trigger: TCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGCATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	GTGCCTTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTTaGTTTCCTGTAAGGACAAGGTCATCCCAGGCTCCGTTGATTTTA	+
Preference number: 1 (lower is better) Translates to: VPSRWIIGPNAKMNG*FPVRTRSSQAPLIL Trigger: TAAAATCAACGGAGCCTGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	TCTTATTTATTTATGACCAGGTCTCTCATTGAACCTGGAGCTTGCTaGCTAGGCTGTGCTGGCTGGTCATTGAACTCCCAGGATCCCTGT	+
Preference number: 1 (lower is better) Translates to: SYLFMTRSLIEPGAC*LGCAGWSLNSQDPC Trigger: ACAGGGATCCTGGGAGTTCAATGACCAGCCAGCACAGCCTAGTCAGCAAGCTCCAGGTTCAATGAGAGACCTGGTCATAAATAAATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	AACTTCATCGGGGCCTTAGACTGCAGACCAAAGATGGAGGTCAGGTaGTGCAAACGTGTATGTGATCACACACACAAGAGAAAGACAGAA	+
Preference number: 1 (lower is better) Translates to: NFIGALDCRPKMEVR*CKRVCDHTHKRKTE Trigger: TTCTGTCTTTCTCTTGTGTGTGTGATCACATACACGTTTGCACCACCTGACCTCCATCTTTGGTCTGCAGTCTAAGGCCCCGATGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	CTACAACTGTTCTCCATCTTATTTATTTATGACCAGGTCTCTCATTaGACCTGGAGCTTGCTGACTAGGCTGTGCTGGCTGGTCATTGAA	+
Preference number: 1 (lower is better) Translates to: LQLFSILFIYDQVSH*TWSLLTRLCWLVIE Trigger: TTCAATGACCAGCCAGCACAGCCTAGTCAGCAAGCTCCAGGTTCAATGAGAGACCTGGTCATAAATAAATAAGATGGAGAACAGTTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 90 bp	CAGGATCCCTGTAACCATAGGCTCATCATTGAGATTACTAGAACCTaGTGCCAAGCCCATATTTTACAAAAGTGCAGAGATCCAAGCTCA	+
Preference number: 1 (lower is better) Translates to: QDPCNHRLIIEITRT*CQAHILQKCRDPSS Trigger: TGAGCTTGGATCTCTGCACTTTTGTAAAATATGGGCTTGGCAGCAGGTTCTAGTAATCTCAATGATGAGCCTATGGTTACAGGGATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	ATAGGCAAAGGACTCATTGCAAAGAACTTGAGATCATGGAAGAACTaGAGGAAAGTCCTTCAAGACCCAAGTCCAGGAAACAGAGTACAG	+
Preference number: 1 (lower is better) Translates to: IGKGLIAKNLRSWKN*RKVLQDPSPGNRVQ Trigger: CTGTACTCTGTTTCCTGGACTTGGGTCTTGAAGGACTTTCCTTCAGTTCTTCCATGATCTCAAGTTCTTTGCAATGAGTCCTTTGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 90 bp	GATCCCTGTAACCATAGGCTCATCATTGAGATTACTAGAACCTGCTaGCAAGCCCATATTTTACAAAAGTGCAGAGATCCAAGCTCAAGT	+
Preference number: 1 (lower is better) Translates to: DPCNHRLIIEITRTC*QAHILQKCRDPSSS Trigger: ACTTGAGCTTGGATCTCTGCACTTTTGTAAAATATGGGCTTGGCAGCAGGTTCTAGTAATCTCAATGATGAGCCTATGGTTACAGGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 90 bp	ATGAGAAATGGCAAAGCAGGCTTGGACTTTGTGTGTGTGCTTGTGTaGTTGCATACAACATACAAATGCACCTACCTAGCCTTGTTATGT	+
Preference number: 1 (lower is better) Translates to: MRNGKAGLDFVCVLV*LHTTYKCTYLALLC Trigger: ACATAACAAGGCTAGGTAGGTGCATTTGTATGTTGTATGCAAGCACACAAGCACACACACAAAGTCCAAGCCTGCTTTGCCATTTCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	CATCTCTGTTTCCTCCGCTGGACAGGTAAAATGATAGAAGATTACTaGGGAGTGTCAAGAAAGATCCTTGGAGATCTAAAGTTCTTGGAA	+
Preference number: 1 (lower is better) Translates to: HLCFLRWTGKMIEDY*GVSRKILGDLKFLE Trigger: TTCCAAGAACTTTAGATCTCCAAGGATCTTTCTTGACACTCCCCAGTAATCTTCTATCATTTTACCTGTCCAGCGGAGGAAACAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	GCACACACACGAACACACAAAAATGATACAGAATCAACAAACATGTaGCCACAAGGGAAAGAACTGAGAAAGGATAAGAGCAGAAACAGG	+
Preference number: 1 (lower is better) Translates to: AHTRTHKNDTESTNM*PQGKELRKDKSRNR Trigger: CCTGTTTCTGCTCTTATCCTTTCTCAGTTCTTTCCCTTGTGGTCACATGTTTGTTGATTCTGTATCATTTTTGTGTGTTCGTGTGTGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 90 bp	AAAATGATACAGAATCAACAAACATGTGACCACAAGGGAAAGAACTaGGAAAGGATAAGAGCAGAAACAGGAAAACAGAACAGGGAGGGA	+
Preference number: 1 (lower is better) Translates to: KMIQNQQTCDHKGKN*ERIRAETGKQNREG Trigger: TCCCTCCCTGTTCTGTTTTCCTGTTTCTGCTCTTATCCTTTCTCAGTTCTTTCCCTTGTGGTCACATGTTTGTTGATTCTGTATCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	GTTCAGAATCTGCCATTAAACCATGTATATTATTCGCTAAGCCCTTaGAACTTAGTGCATATAGTGGAATGGAACAAAAGAGCGCTTGAG	+
Preference number: 1 (lower is better) Translates to: VQNLPLNHVYYSLSP*NLVHIVEWNKRALE Trigger: CTCAAGCGCTCTTTTGTTCCATTCCACTATATGCACTAAGTTCCAAGGGCTTAGCGAATAATATACATGGTTTAATGGCAGATTCTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 90 bp	GTATATTATTCGCTAAGCCCTTGGAACTTAGTGCATATAGTGGAATaGAACAAAAGAGCGCTTGAGTTAGCTTTGAGCACCTTGAATTTA	+
Preference number: 1 (lower is better) Translates to: VYYSLSPWNLVHIVE*NKRALELALSTLNL Trigger: TAAATTCAAGGTGCTCAAAGCTAACTCAAGCGCTCTTTTGTTCCATTCCACTATATGCACTAAGTTCCAAGGGCTTAGCGAATAATATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 90 bp	GCCCGGCAGCTGGGGATCCGCTATGATAACCTGACCGGGGATGTTTaGCTAGCCTCTGGGACCGTGGCTTACCTGGGTGCCTTCACGGTG	+
Preference number: 2 (lower is better) Translates to: ARQLGIRYDNLTGDV*LASGTVAYLGAFTV Trigger: CACCGTGAAGGCACCCAGGTAAGCCACGGTCCCAGAGGCTAGCAAAACATCCCCGGTCAGGTTATCATAGCGGATCCCCAGCTGCCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR GCA 90 bp	ACTCCTTTTGTTCCTGTTCTCCACAGAATGAGTGTGAGGGAGACCTGGCCGAGGACAGAAGCATGCGTGTaGGCGTGCACACACACACAC	+
Preference number: 2 (lower is better) Translates to: TPFVPVLHRMSVRETWPRTEACV*ACTHTH Trigger: GTGTGTGTGTGTGCACGCGCACACGCATGCTTCTGT...CCTCGGCCAGGTCTCCCTCACACTCATTCTGTGGAGAACAGGAACAAAAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR GCA 90 bp	CCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGCCTTGGCATTGTGGCTaGCAAGGAGAAGCCAGAGCA	+
Preference number: 2 (lower is better) Translates to: PILLKATFKQQGVEYMRLPWHCG*QGEARA Trigger: TGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGG...CAGTCTCATGTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR-3UTR TCA 90 bp	TCAATCCCTGAGATCCACATGGAGAGAACTGATTCCTGCAAGTTGTCCCCCAACAGCTGCTCGGTCAGCTaGGAAAATGCAGGTACCTCT	+
Preference number: 2 (lower is better) Translates to: SIPEIHMERTDSCKLSPNSCSVS*ENAGTS Trigger: AGAGGTACCTGCATTTTCTCAGCTGACCGAGCAGCT...GTTGGGGGACAACTTGCAGGAATCAGTTCTCTCCATGTGGATCTCAGGGATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR GCA 90 bp	GATTTCCAGCCAGCTGTCATTAAAAATGTATCATCTGCCTGTGAGGGCCTGTGCCGTGGCTTACCTGGGTaGCTTCACGGTGGATTATCG	+
Preference number: 2 (lower is better) Translates to: DFQPAVIKNVSSACEGLCRGLPG*LHGGLS Trigger: CGATAATCCACCGTGAAGGCACCCAGGTAAGCCACG...GCACAGGCCCTCACAGGCAGATGATACATTTTTAATGACAGCTGGCTGGAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 90 bp	GGTGCCTTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTaGGTTTCCTGTAAGGACAAGGTCATCCCAGGCTCCGTTGATTTT	+
Preference number: 2 (lower is better) Translates to: GAFTVDYRAQCQNEW*VSCKDKVIPGSVDF Trigger: AAAATCAACGGAGCCTGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR TCA 90 bp	ATCCCTTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCCAAGGACAACTTCAGTaGAGATGTAAAGTCCATGAC	+
Preference number: 2 (lower is better) Translates to: IPLHPMHTGWQPQEFPSAQGQLQ*RCKVHD Trigger: GTCATGGACTTTACATCTTCACTGAAGTTGTCCTTG...GGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR TCA 90 bp	TGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTGTTTACATTCAAAACTaGGTTGGCTCACCATTCTCA	+
Preference number: 2 (lower is better) Translates to: CIRCTLDGSPKNSLQPSSVYIQN*VGSPFS Trigger: TGAGAATGGTGAGCCAACTCAGTTTTGAATGTAAAC...AGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR CCA 90 bp	TCAATCCCTGAGATCCACATGGAGAGAACTGATTCCTGCAAGTTGTCCCCCAACAGGCTGAGGGGAAGCTaGAGATCCAAATGCAAAAAC	+
Preference number: 2 (lower is better) Translates to: SIPEIHMERTDSCKLSPNRLRGS*RSKCKN Trigger: GTTTTTGCATTTGGATCTCCAGCTTCCCCTCAGCCT...GTTGGGGGACAACTTGCAGGAATCAGTTCTCTCCATGTGGATCTCAGGGATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR TCA 90 bp	TCAATCCCTGAGATCCACATGGAGAGAACTGATTCCTGCAAGTTGTCCCCCAACTTGAACCCATCTTGCTaGAGGCAACATTCAAACAGC	+
Preference number: 2 (lower is better) Translates to: SIPEIHMERTDSCKLSPNLNPSC*RQHSNS Trigger: GCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAA...GTTGGGGGACAACTTGCAGGAATCAGTTCTCTCCATGTGGATCTCAGGGATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR TCA 90 bp	GATTTCCAGCCAGCTGTCATTAAAAATGTATCATCTGCCTGTGAGGGCCTGTGCCTGATACCAATTACGTaGGGACTCTGGAAAATGCCC	+
Preference number: 2 (lower is better) Translates to: DFQPAVIKNVSSACEGLCLIPIT*GLWKMP Trigger: GGGCATTTTCCAGAGTCCTCACGTAATTGGTATCAG...GCACAGGCCCTCACAGGCAGATGATACATTTTTAATGACAGCTGGCTGGAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CCA 90 bp	GAGATCATGGAAGAACTGAAGGAAAGTCCTTCAAGACCCAAGTCCAGGAAACAGTCCAATTCCAGGCGCTaGCCTTTGATGATTGACCCT	+
Preference number: 2 (lower is better) Translates to: EIMEELKESPSRPKSRKQSNSRR*PLMIDP Trigger: AGGGTCAATCATCAAAGGCCAGCGCCTGGAATTGGA...CTGTTTCCTGGACTTGGGTCTTGAAGGACTTTCCTTCAGTTCTTCCATGATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CCA 90 bp	GCTTCTGGGCCCCGCTTCCCTTTGCTTAGCATTCCTTCTTATCTGGCTGGCTTTCAATGCCAAAATGAATaGTTGGTTTCCTGTAAGGAC	+
Preference number: 2 (lower is better) Translates to: ASGPRFPLLSIPSYLAGFQCQNE*LVSCKD Trigger: GTCCTTACAGGAAACCAACCATTCATTTTGGCATTG...AAAGCCAGCCAGATAAGAAGGAATGCTAAGCAAAGGGAAGCGGGGCCCAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 90 bp	TTGGAAAACGTTGGAGAAGAGCTGGATGCCTTTATTGAACCCATCTaGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGA	+
Preference number: 2 (lower is better) Translates to: LENVGEELDAFIEPI*LKATFKQQGVEYMR Trigger: TCTCATGTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGCATCCAGCTCTTCTCCAACGTTTTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CCA 90 bp	GCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGGTGAAAATATTATTAACTCCTTGGCATTGTaGCTGCCAAGGAGAAGCCAG	+
Preference number: 2 (lower is better) Translates to: ATFKQQGVEYMRLGENIINSLAL*LPRRSQ Trigger: CTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTT...AATAATATTTTCACCCAGTCTCATGTACTCCACCCCCTGCTGTTTGAATGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR-3UTR TCA 90 bp	CTCCAAATCCAAGCCATCTTGTTCCAGGTCCCTTGTGTTTTAGAGACGTTTGGAAGGGGGTGGAGTACATaGGACTGGGTGAAAATATTA	+
Preference number: 2 (lower is better) Translates to: LQIQAILFQVPCVLETFGRGWST*DWVKIL Trigger: TAATATTTTCACCCAGTCTCATGTACTCCACCCCCT...TCCAAACGTCTCTAAAACACAAGGGACCTGGAACAAGATGGCTTGGATTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR TCA 90 bp	CTCCAAATCCAAGCCATCTTGTTCCAGGTCCCTTGTGTTTTAGAGACGTTTGGAGTGCAAACGTGTATGTaGTCACACACACAAGAGAAA	+
Preference number: 2 (lower is better) Translates to: LQIQAILFQVPCVLETFGVQTCM*SHTQEK Trigger: TTTCTCTTGTGTGTGTGATCACATACACGTTTGCAC...TCCAAACGTCTCTAAAACACAAGGGACCTGGAACAAGATGGCTTGGATTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR GCA 90 bp	AGTCTTTGTTTATTTAGCAAGCACTTTATCTACCAGGAAGTCTCCCCAGCACCACCAGAGGAGCACAATTaGAGGGTAGGATTGAAAACC	+
Preference number: 2 (lower is better) Translates to: SLCLFSKHFIYQEVSPAPPEEHN*RVGLKT Trigger: GGTTTTCAATCCTACCCTGCAATTGTGCTCCTCTGG...TGGTGCTGGGGAGACTTCCTGGTAGATAAAGTGCTTGCTAAATAAACAAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 90 bp	GATTACTGGGGAGTGTCAAGAAAGATCCTTGGAGATCTAAAGTTCTaGGAAAGTCTCAAGACATACGACAAAGACAACATCCCTTCGGTG	+
Preference number: 2 (lower is better) Translates to: DYWGVSRKILGDLKF*ESLKTYDKDNIPSV Trigger: CACCGAAGGGATGTTGTCTTTGTCGTATGTCTTGAGACTTTCCAAGAACTTTAGATCTCCAAGGATCTTTCTTGACACTCCCCAGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 90 bp	AGAAATGGCAAAGCAGGCTTGGACTTTGTGTGTGTGCTTGTGTGCTaGCATACAACATACAAATGCACCTACCTAGCCTTGTTATGTACT	+
Preference number: 2 (lower is better) Translates to: RNGKAGLDFVCVLVC*HTTYKCTYLALLCT Trigger: AGTACATAACAAGGCTAGGTAGGTGCATTTGTATGTTGTATGCAAGCACACAAGCACACACACAAAGTCCAAGCCTGCTTTGCCATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR TCA 90 bp	CATATAGGACTTTCTGTTACAAGTAGTGCCTTCAAACTGCATGTGAAGTTTCAAGGTGGCCTCCTGTCTTaGTATAAGCTAGTACGCTCC	+
Preference number: 2 (lower is better) Translates to: HIGLSVTSSAFKLHVKFQGGLLS*YKLVRS Trigger: GGAGCGTACTAGCTTATATCAAGACAGGAGGCCACC...TTGAAACTTCACATGCAGTTTGAAGGCACTACTTGTAACAGAAAGTCCTATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CCA 90 bp	CATGTGTATAGGCTAGAGGTTGGCACTGGCTATCTTCAATCCATTCTGCACCTTGGACAGGCCAATAAGTaGGTGAAGAATATGGAAAAA	+
Preference number: 2 (lower is better) Translates to: HVYRLEVGTGYLQSILHLGQANK*VKNMEK Trigger: TTTTTCCATATTCTTCACCCACTTATTGGCCTGTCC...AAGGTGCAGAATGGATTGAAGATAGCCAGTGCCAACCTCTAGCCTATACACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 90 bp	AGAGGTTGGCACTGGCTATCTTCAATCCATTCTGCACCTTATTTTTaGAGAAAGGATCTCACCAAAACGAGAGTTTACCAATTCAGCTGG	+
Preference number: 2 (lower is better) Translates to: RGWHWLSSIHSAPYF*RKDLTKTRVYQFSW Trigger: CCAGCTGAATTGGTAAACTCTCGTTTTGGTGAGATCCTTTCTCAAAAAATAAGGTGCAGAATGGATTGAAGATAGCCAGTGCCAACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR TCA 90 bp	TTCAGTGAAGATGTAAAGTCCATGACCTCTAGGGACAATGTCATAGTTCAAGCAGTTTACATTCAAAACTaGGTTGGCTCACCATTCTCA	+
Preference number: 2 (lower is better) Translates to: FSEDVKSMTSRDNVIVQAVYIQN*VGSPFS Trigger: TGAGAATGGTGAGCCAACTCAGTTTTGAATGTAAAC...TGCTTGAACTATGACATTGTCCCTAGAGGTCATGGACTTTACATCTTCACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR GCA 90 bp	CATATAGGACTTTCTGTTACAAGTAGTGCCTTCAAACTGCATGTGAAGTTTCAAGTGTGTGTGCTTGTGTaGTTGCATACAACATACAAA	+
Preference number: 2 (lower is better) Translates to: HIGLSVTSSAFKLHVKFQVCVLV*LHTTYK Trigger: TTTGTATGTTGTATGCAAGCACACAAGCACACACAC...TTGAAACTTCACATGCAGTTTGAAGGCACTACTTGTAACAGAAAGTCCTATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	CACAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATaGCAGCACTTGAGGCTGCCCTTGCTGCCCTCGACA	+
Preference number: 3 (lower is better) Translates to: HRMSVRETWPRP*QHLRLPLLPST Trigger: TGTCGAGGGCAGCAAGGGCAGCCTCAAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 72 bp	CCTCTGGGACCGTGGCTTACCTGGGTGCCTTCACGGTaGATTATCGGGCCCAATGCCAAAATGAATGGTTGG	+
Preference number: 3 (lower is better) Translates to: PLGPWLTWVPSR*IIGPNAKMNGW Trigger: CCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCACCCAGGTAAGCCACGGTCCCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	TCAATCCCTGAGATCCACATGGAGAGAACTGATTCCTGCAAGTTGTCCCCCAACACCGAGTGGCCAAGGTaGTGGCTCCCAAACGGGAGC	+
Preference number: 3 (lower is better) Translates to: SIPEIHMERTDSCKLSPNTEWPR*WLPNGS Trigger: GCTCCCGTTTGGGAGCCACAACCTTGGCCACTCGGT...GTTGGGGGACAACTTGCAGGAATCAGTTCTCTCCATGTGGATCTCAGGGATTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	GGTTGTGGCTCCCAAACGGGAGCGACTGAGGGAGGCTaGGGGGAAGCTGGAGATCCAAATGCAAAAACTGAA	+
Preference number: 3 (lower is better) Translates to: GCGSQTGATEGG*GEAGDPNAKTE Trigger: TTCAGTTTTTGCATTTGGATCTCCAGCTTCCCCTCAGCCTCCCTCAGTCGCTCCCGTTTGGGAGCCACAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	CAGGGATCCTCCTGTCTATGTCTGCTTCCTCAACTGTaGGTGAGGGCTACAGGTGTGCCCTACCTTACCCAG	+
Preference number: 3 (lower is better) Translates to: QGSSCLCLLPQL*VRATGVPYLTQ Trigger: CTGGGTAAGGTAGGGCACACCTGTAGCCCTCACTCACAGTTGAGGAAGCAGACATAGACAGGAGGATCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	TGTTTTGCTAGCCTCTGGGACCGTGGCTTACCTGGGTaGCTTCACGGTGGATTATCGGGCCCAATGCCAAAA	+
Preference number: 3 (lower is better) Translates to: CFASLWDRGLPG*LHGGLSGPMPK Trigger: TTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCACCCAGGTAAGCCACGGTCCCAGAGGCTAGCAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	GCTTCTGGGCCCCGCTTCCCTTTGCTTAGCATTCCTTCTTATCTGGCTGGCTTTTGTGCTGGCTGGTCATaGAACTCCCAGGATCCCTGT	+
Preference number: 3 (lower is better) Translates to: ASGPRFPLLSIPSYLAGFCAGWS*NSQDPC Trigger: ACAGGGATCCTGGGAGTTCAATGACCAGCCAGCACA...AAAGCCAGCCAGATAAGAAGGAATGCTAAGCAAAGGGAAGCGGGGCCCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	AGCCATCCATCAGGCCACAAAGACACAGAAAGGGAGTaGGGCAGGAAGAAGCGAGACAGAAGCATGCGTGTG	+
Preference number: 3 (lower is better) Translates to: SHPSGHKDTERE*GRKKRDRSMRV Trigger: CACACGCATGCTTCTGTCTCGCTTCTTCCTGCCTCACTCCCTTTCTGTGTCTTTGTGGCCTGATGGATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	GATCCTCCTGTCTATGTCTGCTTCCTCAACTGTGAGTaGGGGCTACAGGTGTGCCCTACCTTACCCAGCTCT	+
Preference number: 3 (lower is better) Translates to: DPPVYVCFLNCE*GLQVCPTLPSS Trigger: AGAGCTGGGTAAGGTAGGGCACACCTGTAGCCCTCACTCACAGTTGAGGAAGCAGACATAGACAGGAGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	GCTTCTGGGCCCCGCTTCCCTTTGCTTAGCATTCCTTCTTATCTGGCTGGCTTTTCCCCAGCACCAGAGTaGACTTTGGAGAAGCCTGTA	+
Preference number: 3 (lower is better) Translates to: ASGPRFPLLSIPSYLAGFSPAPE*TLEKPV Trigger: TACAGGCTTCTCCAAAGTCAACTCTGGTGCTGGGGA...AAAGCCAGCCAGATAAGAAGGAATGCTAAGCAAAGGGAAGCGGGGCCCAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	ATAGAAAAGAACAGCAAAGGGATGGAGGGGGAAACTTaGGCGGCAGACATGTGGGACAGCCAGGCTCACAAC	+
Preference number: 3 (lower is better) Translates to: IEKNSKGMEGET*AADMWDSQAHN Trigger: GTTGTGAGCCTGGCTGTCCCACATGTCTGCCGCTCAAGTTTCCCCCTCCATCCCTTTGCTGTTCTTTTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 72 bp	CGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTTaGTTTCCTGTAAGGACAAGGTCATCCCAGGCTCCG	+
Preference number: 3 (lower is better) Translates to: RWIIGPNAKMNG*FPVRTRSSQAP Trigger: CGGAGCCTGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	ATGATCCCAGCACTGCACTGTGGAGGACTGGGAGTCTaGGATCAGCCTGGGCTACATAATGAGAAGTTCTCA	+
Preference number: 3 (lower is better) Translates to: MIPALHCGGLGV*DQPGLHNEKFS Trigger: TGAGAACTTCTCATTATGTAGCCCAGGCTGATCTCAGACTCCCAGTCCTCCACAGTGCAGTGCTGGGATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 72 bp	CAGCAATTAGCTAATCCCTTTGCATCCGATGCACACTaGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCT	+
Preference number: 3 (lower is better) Translates to: QQLANPFASDAH*MAAPRIPFSLP Trigger: AGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGATTAGCTAATTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CCA 72 bp	CACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGTaGCTGCCAAGGAGAAGCCAGAGCATTCTCAAAAGT	+
Preference number: 3 (lower is better) Translates to: HPWVSKINSLAL*LPRRSQSILKS Trigger: ACTTTTGAGAATGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGAGACCCAAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR CCA 72 bp	GGGGCCTTAGACTGCAGACCAAAGATGGAGGTCAGGTaGTGCAAACGTGTATGTGATCACACACACAAGAGA	+
Preference number: 3 (lower is better) Translates to: GALDCRPKMEVR*CKRVCDHTHKR Trigger: TCTCTTGTGTGTGTGATCACATACACGTTTGCACCACCTGACCTCCATCTTTGGTCTGCAGTCTAAGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	TACCTGGGTGCCTTCACGGTGGATTATCGGGCCCAATaGCAAAATGAATGGTTGGTTTCCTGTAAGGACAAG	+
Preference number: 3 (lower is better) Translates to: YLGAFTVDYRAQ*QNEWLVSCKDK Trigger: CTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAAGGCACCCAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 72 bp	TTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATaGTTGGTTTCCTGTAAGGACAAGGTCATCCCAGGC	+
Preference number: 3 (lower is better) Translates to: FTVDYRAQCQNE*LVSCKDKVIPG Trigger: GCCTGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	ACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTGTAGGCCGCAGATAACATTCAAAACTGAGTaGGCTCACCATTCTCAAAAG	+
Preference number: 3 (lower is better) Translates to: TGWQPQEFPSAFLCRPQITFKTE*AHHSQK Trigger: CTTTTGAGAATGGTGAGCCAACTCAGTTTTGAATGT...TATCTGCGGCCTACAGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR CAA 90 bp	TGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTACATTCAAAACTGAGTaGGCTCACCATTCTCAAAAG	+
Preference number: 3 (lower is better) Translates to: CIRCTLDGSPKNSLQPSSTFKTE*AHHSQK Trigger: CTTTTGAGAATGGTGAGCCAACTCAGTTTTGAATGT...AGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR CAA 90 bp	CTCCAAATCCAAGCCATCTTGTTCCAGGTCCCTTGTGTTTTAGAGACGTTTGGATCCAAGATCAACTCCTaGGCATTGTGGCTGCCAAGG	+
Preference number: 3 (lower is better) Translates to: LQIQAILFQVPCVLETFGSKINS*ALWLPR Trigger: CCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGA...TCCAAACGTCTCTAAAACACAAGGGACCTGGAACAAGATGGCTTGGATTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	TTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACTCCAAGATCAACTCCTaGGCATTGTGGCTGCCAAGG	+
Preference number: 3 (lower is better) Translates to: FIEPILLKATFKQQGVEYSKINS*ALWLPR Trigger: CCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGA...GTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR TCA 72 bp	GAGAAGAGCTGGATGCCTTTATTGAACCCATCTTGCTaGAGGCAACATTCAAACAGCAGGGGGTGGAGTACA	+
Preference number: 3 (lower is better) Translates to: EKSWMPLLNPSC*RQHSNSRGWST Trigger: TGTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGCATCCAGCTCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR TCA 72 bp	AGTTCTCAAATGTTTAGGACATCCAAACTGCAGCCATaGGGGGCCAGGCAGACCTTTGAGAACAGAACTCTC	+
Preference number: 3 (lower is better) Translates to: SSQMFRTSKLQP*GARQTFENRTL Trigger: GAGAGTTCTGTTCTCAAAGGTCTGCCTGGCCCCTCATGGCTGCAGTTTGGATGTCCTAAACATTTGAGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	GCCTTAGACTGCAGACCAAAGATGGAGGTCAGGTGGTaGAAACGTGTATGTGATCACACACACAAGAGAAAG	+
Preference number: 3 (lower is better) Translates to: ALDCRPKMEVRW*KRVCDHTHKRK Trigger: CTTTCTCTTGTGTGTGTGATCACATACACGTTTGCACCACCTGACCTCCATCTTTGGTCTGCAGTCTAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	AGTCTTTGTTTATTTAGCAAGCACTTTATCTACCAGGAAGTCTCCCCAGCACCAGGCACCCCTGTCTTGTaGGAAAACGTTGGAGAAGAG	+
Preference number: 3 (lower is better) Translates to: SLCLFSKHFIYQEVSPAPGTPVL*ENVGEE Trigger: CTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCC...TGGTGCTGGGGAGACTTCCTGGTAGATAAAGTGCTTGCTAAATAAACAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	GTACAGATGAGGAAGATAAGCTTTCCTACATCTCCCTaGCTAGAAGCTTGGAGTTCACCCCTTCCCCCAATA	+
Preference number: 3 (lower is better) Translates to: VQMRKISFPTSP*LEAWSSPLPPI Trigger: TATTGGGGGAAGGGGTGAACTCCAAGCTTCTAGTCAGGGAGATGTAGGAAAGCTTATCTTCCTCATCTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	CATATAGGACTTTCTGTTACAAGTAGTGCCTTCAAACTGCATGTGAAGTTTCAATCCCTGACTAGAAGCTaGGAGTTCACCCCTTCCCCC	+
Preference number: 3 (lower is better) Translates to: HIGLSVTSSAFKLHVKFQSLTRS*EFTPSP Trigger: GGGGGAAGGGGTGAACTCCAAGCTTCTAGTCAGGGA...TTGAAACTTCACATGCAGTTTGAAGGCACTACTTGTAACAGAAAGTCCTATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	TTCTCCATCTTATTTATTTATGACCAGGTCTCTCATTaGACCTGGAGCTTGCTGACTAGGCTGTGCTGGCTG	+
Preference number: 3 (lower is better) Translates to: FSILFIYDQVSH*TWSLLTRLCWL Trigger: CAGCCAGCACAGCCTAGTCAGCAAGCTCCAGGTTCAATGAGAGACCTGGTCATAAATAAATAAGATGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	GTAAATATTTCTTGGCCATTTAGCTGCTCGGTCAGCTaGGAAAATGCAGGTACCTCTCTGTGGGGTGTAAAC	+
Preference number: 3 (lower is better) Translates to: VNISWPFSCSVS*ENAGTSLWGVN Trigger: GTTTACACCCCACAGAGAGGTACCTGCATTTTCTCAGCTGACCGAGCAGCTAAATGGCCAAGAAATATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CCA 72 bp	TCGCTAAGCCCTTGGAACTTAGTGCATATAGTGGAATaGAACAAAAGAGCGCTTGAGTTAGCTTTGAGCACC	+
Preference number: 3 (lower is better) Translates to: SLSPWNLVHIVE*NKRALELALST Trigger: GGTGCTCAAAGCTAACTCAAGCGCTCTTTTGTTCCATTCCACTATATGCACTAAGTTCCAAGGGCTTAGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	CTCCAAATCCAAGCCATCTTGTTCCAGGTCCCTTGTGTTTTAGAGACGTTTGGATGCCAAAATGAATGGTaGGTTTCCTGTAAGGACAAG	+
Preference number: 3 (lower is better) Translates to: LQIQAILFQVPCVLETFGCQNEW*VSCKDK Trigger: CTTGTCCTTACAGGAAACCAACCATTCATTTTGGCA...TCCAAACGTCTCTAAAACACAAGGGACCTGGAACAAGATGGCTTGGATTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	TATAACCACTCGTCTGAGGAATCCACATTATCTCCCTaGAGTTGCCGTGAAAGTCTGTCTCCTCAACTTCAT	+
Preference number: 3 (lower is better) Translates to: YNHSSEESTLSP*SCRESLSPQLH Trigger: ATGAAGTTGAGGAGACAGACTTTCACGGCAACTTCAGGGAGATAATGTGGATTCCTCAGACGAGTGGTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR TCA 72 bp	GTTGGAAAACGTTGGAGAAGAGCTGGATGCCTTTATTaGACCCATCTTGCTGAAGGCAACATTCAAACAGCA	+
Preference number: 3 (lower is better) Translates to: VGKRWRRAGCLY*THLAEGNIQTA Trigger: TGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGCATCCAGCTCTTCTCCAACGTTTTCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	GGACTCATTGCAAAGAACTTGAGATCATGGAAGAACTaGAGGAAAGTCCTTCAAGACCCAAGTCCAGGAAAC	+
Preference number: 3 (lower is better) Translates to: GLIAKNLRSWKN*RKVLQDPSPGN Trigger: GTTTCCTGGACTTGGGTCTTGAAGGACTTTCCTTCAGTTCTTCCATGATCTCAAGTTCTTTGCAATGAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	AACCATAGGCTCATCATTGAGATTACTAGAACCTGCTaGCAAGCCCATATTTTACAAAAGTGCAGAGATCCA	+
Preference number: 3 (lower is better) Translates to: NHRLIIEITRTC*QAHILQKCRDP Trigger: TGGATCTCTGCACTTTTGTAAAATATGGGCTTGGCAGCAGGTTCTAGTAATCTCAATGATGAGCCTATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	TTCAGTGAAGATGTAAAGTCCATGACCTCTAGGGACAATGTCATAGTTCAAGCAACATTCAAAACTGAGTaGGCTCACCATTCTCAAAAG	+
Preference number: 3 (lower is better) Translates to: FSEDVKSMTSRDNVIVQATFKTE*AHHSQK Trigger: CTTTTGAGAATGGTGAGCCAACTCAGTTTTGAATGT...TGCTTGAACTATGACATTGTCCCTAGAGGTCATGGACTTTACATCTTCACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR CAA 90 bp	TTCAGTGAAGATGTAAAGTCCATGACCTCTAGGGACAATGTCATAGTTCAAGCACTGAAGGTAGTAGTTTaGCTTCTAGTCAAGAAGGAT	+
Preference number: 3 (lower is better) Translates to: FSEDVKSMTSRDNVIVQALKVVV*LLVKKD Trigger: ATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAG...TGCTTGAACTATGACATTGTCCCTAGAGGTCATGGACTTTACATCTTCACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR CAA 90 bp	ATCAGCCTGGGCTACATAATGAGAAGTTCTCAAAAGAGAGCAGAGATTCTCATAGCGCTTGAGTTAGCTTaGAGCACCTTGAATTTAAAT	+
Preference number: 3 (lower is better) Translates to: ISLGYIMRSSQKRAEILIALELA*STLNLN Trigger: ATTTAAATTCAAGGTGCTCAAAGCTAACTCAAGCGC...TATGAGAATCTCTGCTCTCTTTTGAGAACTTCTCATTATGTAGCCCAGGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	GGATTCATTCAGTTCATATCACAGCACCCAGTAAACTaGGGCAGAAAGATCACAAACAAATTTAAGGCTAGC	+
Preference number: 3 (lower is better) Translates to: GFIQFISQHPVN*GRKITNKFKAS Trigger: GCTAGCCTTAAATTTGTTTGTGATCTTTCTGCCTCAGTTTACTGGGTGCTGTGATATGAACTGAATGAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	ACATTATACTTCATATTACGTCTCAAGTATGGTTCTTaGCATGAGTCCCAGATTGGCATGTGCCATAAGCTA	+
Preference number: 3 (lower is better) Translates to: TLYFILRLKYGS*HESQIGMCHKL Trigger: TAGCTTATGGCACATGCCAATCTGGGACTCATGGCAAGAACCATACTTGAGACGTAATATGAAGTATAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR GCA 72 bp	TGTAACCATAGGCTCATCATTGAGATTACTAGAACCTaGTGCCAAGCCCATATTTTACAAAAGTGCAGAGAT	+
Preference number: 3 (lower is better) Translates to: CNHRLIIEITRT*CQAHILQKCRD Trigger: ATCTCTGCACTTTTGTAAAATATGGGCTTGGCAGCAGGTTCTAGTAATCTCAATGATGAGCCTATGGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR-3UTR CAA 90 bp	ACCAATTTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATAACATTCAAAACTGAGTaGGCTCACCATTCTCAAAAG	+
Preference number: 3 (lower is better) Translates to: TNFGGLKVVVLLLVKKDITFKTE*AHHSQK Trigger: CTTTTGAGAATGGTGAGCCAACTCAGTTTTGAATGT...TATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAAATTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR-3UTR CAA 90 bp	AGACCAGGAGCCTACTCAAGGTATTTTCTACAACTGTTCTCCATCTTATTTATTTTATTCGCTAAGCCCTaGGAACTTAGTGCATATAGT	+
Preference number: 3 (lower is better) Translates to: RPGAYSRYFLQLFSILFILFAKP*ELSAYS Trigger: ACTATATGCACTAAGTTCCAAGGGCTTAGCGAATAA...AATAAATAAGATGGAGAACAGTTGTAGAAAATACCTTGAGTAGGCTCCTGGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR TCA 72 bp	TCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTaGGTTGGCTCACCATTCTCAAAAGTAAAGTGTCCT	+
Preference number: 3 (lower is better) Translates to: SRRIYCLVYIQN*VGSPFSKVKCP Trigger: AGGACACTTTACTTTTGAGAATGGTGAGCCAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CCA 72 bp	AGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTaGTTTACATTCAAAACTGAGTTGGCTCACCATTCT	+
Preference number: 3 (lower is better) Translates to: SSFASSQEGYIA*FTFKTELAHHS Trigger: AGAATGGTGAGCCAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CAA 72 bp	CTGGGGATCCGCTATGATAACCTGACCGGGGATGTTTaGCTAGCCTCTGGGACCGTGGCTTACCTGGGTGCC	+
Preference number: 4 (lower is better) Translates to: LGIRYDNLTGDV*LASGTVAYLGA Trigger: GGCACCCAGGTAAGCCACGGTCCCAGAGGCTAGCAAAACATCCCCGGTCAGGTTATCATAGCGGATCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR GCA 90 bp	TGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: CIRCTLDGSPKNSLQPSSSPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...AGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	ACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAGCCTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: TLGSPRSTPWHCGCQGEASPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...GGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGAGACCCAAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR TCA 90 bp	TCCCTTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: SLCIRCTLDGSPKNSLQPDLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...AGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	ACTCCTTTTGTTCCTGTTCTCCACAGAATGAGTGTGAGGGAGACCTGGCCGAGGTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: TPFVPVLHRMSVRETWPRSPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...CCTCGGCCAGGTCTCCCTCACACTCATTCTGTGGAGAACAGGAACAAAAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR TCA 90 bp	CCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: PILLKATFKQQGVEYMRLDLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...CAGTCTCATGTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR TCA 90 bp	TCCCTTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTAGTTTTTCCTGGGTTTaGAGTCCCCGACCTCGTCGT	+
Preference number: 4 (lower is better) Translates to: SLCIRCTLDGSPKNSLQPSFSWV*SPRPRR Trigger: ACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACT...AGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	CGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTGTAGGCTGCCTGCCATTTCCGTaGAAGCCTGAAAATGCTTCG	+
Preference number: 4 (lower is better) Translates to: RCTLDGSPKNSLQPSSVGCLPFP*KPENAS Trigger: CGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCA...GCCTACAGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	ATCCCTTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCAT	+
Preference number: 4 (lower is better) Translates to: IPLHPMHTGWQPQEFPSAMVSSI*PDAACH Trigger: ATGGCAGGCAGCATCAGGGCAGATGGAAGACACCAT...GGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	TCTCCTCAACTTCATGATCACACCCTTGGGTCTCCAAGATCAACTCCTTGGCATGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: SPQLHDHTLGSPRSTPWHDLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...ATGCCAAGGAGTTGATCTTGGAGACCCAAGGGTGTGATCATGAAGTTGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	CGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTGTAGGCCAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: RCTLDGSPKNSLQPSSVGQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...GCCTACAGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CAA 72 bp	CACTTTATCTACCAGGAAGTCTCCCCAGCACCAGAGTaGACTTTGGAGAAGCCTGTAGCGCTGTTGTTGGGG	+
Preference number: 4 (lower is better) Translates to: HFIYQEVSPAPE*TLEKPVALLLG Trigger: CCCCAACAACAGCGCTACAGGCTTCTCCAAAGTCAACTCTGGTGCTGGGGAGACTTCCTGGTAGATAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR GCA 90 bp	CCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAGCCAGAGCATTCTCAATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCAT	+
Preference number: 4 (lower is better) Translates to: PRSTPWHCGCQGEARAFSMVSSI*PDAACH Trigger: ATGGCAGGCAGCATCAGGGCAGATGGAAGACACCAT...TGAGAATGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR GCA 90 bp	TCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAGCCAGAGCATTCTCATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCAT	+
Preference number: 4 (lower is better) Translates to: SKINSLALWLPRRSQSILMVSSI*PDAACH Trigger: ATGGCAGGCAGCATCAGGGCAGATGGAAGACACCAT...GAGAATGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR TCA 90 bp	GCCTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGAGTTTTTCCTGGGTTTaGAGTCCCCGACCTCGTCGT	+
Preference number: 4 (lower is better) Translates to: AFIEPILLKATFKQQGVESFSWV*SPRPRR Trigger: ACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACT...CTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR GCA 90 bp	AGGCCGCAGATAGCTCCCAAGGACAACTTCAGTGAAGATGTAAAGTCCATGACCATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCAT	+
Preference number: 4 (lower is better) Translates to: RPQIAPKDNFSEDVKSMTMVSSI*PDAACH Trigger: ATGGCAGGCAGCATCAGGGCAGATGGAAGACACCAT...GGTCATGGACTTTACATCTTCACTGAAGTTGTCCTTGGGAGCTATCTGCGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	GGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: GGLKVVVLLLVKKDILPGSPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...ACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: FASDAHWMAAPRIPFSLPQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...AGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CAA 72 bp	TCACACCCTTGGGTCTCCAAGATCAACTCCTTGGCATaGTGGCTGCCAAGGAGAAGCCAGAGCATTCTCAAA	+
Preference number: 4 (lower is better) Translates to: SHPWVSKINSLA*WLPRRSQSILK Trigger: TTTGAGAATGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGAGACCCAAGGGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR CAA 72 bp	ACGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTaGGTTTCCTGTAAGGACAAGGTCATCCCAGGCTCC	+
Preference number: 4 (lower is better) Translates to: TVDYRAQCQNEW*VSCKDKVIPGS Trigger: GGAGCCTGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR TCA 90 bp	TGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTTCAGCTCTGGGTCTGTaGGATTTTTGTTTTTCTGGA	+
Preference number: 4 (lower is better) Translates to: CIRCTLDGSPKNSLQPSSSALGL*DFCFSG Trigger: TCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGA...AGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	ATCCCTTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTCAGCTCTGGGTCTGTaGGATTTTTGTTTTTCTGGA	+
Preference number: 4 (lower is better) Translates to: IPLHPMHTGWQPQEFPSASALGL*DFCFSG Trigger: TCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGA...GGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	TGGGTCTCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAGCCAGAGCTCAGCTCTGGGTCTGTaGGATTTTTGTTTTTCTGGA	+
Preference number: 4 (lower is better) Translates to: WVSKINSLALWLPRRSQSSALGL*DFCFSG Trigger: TCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGA...GCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGAGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	TTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTACTGTTTTTCTTCGATaGTGTCTTCCATCTGCCCTG	+
Preference number: 4 (lower is better) Translates to: FASDAHWMAAPRIPFSLPTVFLR*CLPSAL Trigger: CAGGGCAGATGGAAGACACCATCGAAGAAAAACAGT...AGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	TTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTTCAGCTCTGGGTCTGTaGGATTTTTGTTTTTCTGGA	+
Preference number: 4 (lower is better) Translates to: FASDAHWMAAPRIPFSLPSALGL*DFCFSG Trigger: TCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGA...AGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	TTCAGTGAAGATGTAAAGTCCATGACCTCTAGGGACAATGTCATAGTTCAAGCAGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: FSEDVKSMTSRDNVIVQADLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...TGCTTGAACTATGACATTGTCCCTAGAGGTCATGGACTTTACATCTTCACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	TTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACAGTTTTTCCTGGGTTTaGAGTCCCCGACCTCGTCGT	+
Preference number: 4 (lower is better) Translates to: FIEPILLKATFKQQGVEYSFSWV*SPRPRR Trigger: ACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACT...GTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR GCA 90 bp	TTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: FGGLKVVVLLLVKKDILPSPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...AGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	AGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: RSEGSSFASSQEGYIAWFDLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...AAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	AAGAAGGATATATTGCCTGGTTTACATTCAAAACTGAGTTGGCTCACCATTCTCGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: KKDILPGLHSKLSWLTILDLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...GAGAATGGTGAGCCAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	TCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: SEGSSFASSQEGYIAWFTSPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...TGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	CTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATGACCTCGTCGTGCGGTaGGACCCATTGGAGGCAGAT	+
Preference number: 4 (lower is better) Translates to: LKVVVLLLVKKDILPGLHDLVVR*DPLEAD Trigger: ATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTC...ATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	GGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTAGTTTTTCCTGGGTTTaGAGTCCCCGACCTCGTCGT	+
Preference number: 4 (lower is better) Translates to: GGLKVVVLLLVKKDILPGSFSWV*SPRPRR Trigger: ACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACT...ACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	TTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTGAGTTGTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGG	+
Preference number: 4 (lower is better) Translates to: FASSQEGYIAWFTFKTELSPTSS*GETHWR Trigger: CCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGA...CAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	ATGATCACACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGTCTGGAACAGTGTTCTaGCTTCCTTTAGTATGTACT	+
Preference number: 4 (lower is better) Translates to: MITPLGLQDQLLGIVAAKSGTVF*LPLVCT Trigger: AGTACATACTAAAGGAAGCCAGAACACTGTTCCAGA...CTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGAGACCCAAGGGTGTGATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	TCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAGCCAGAGCATTCTCTCTGGAACAGTGTTCTaGCTTCCTTTAGTATGTACT	+
Preference number: 4 (lower is better) Translates to: SKINSLALWLPRRSQSILSGTVF*LPLVCT Trigger: AGTACATACTAAAGGAAGCCAGAACACTGTTCCAGA...GAGAATGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	GTGAAAGTCTGTCTCCTCAACTTCATGATCACACCCTTGGGTCTCCAAGATCAACAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: VKVCLLNFMITPLGLQDQQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...TTGATCTTGGAGACCCAAGGGTGTGATCATGAAGTTGAGGAGACAGACTTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	CATGTGTATAGGCTAGAGGTTGGCACTGGCTATCTTCAATCCATTCTGCACCTTACTGTTTTTCTTCGATaGTGTCTTCCATCTGCCCTG	+
Preference number: 4 (lower is better) Translates to: HVYRLEVGTGYLQSILHLTVFLR*CLPSAL Trigger: CAGGGCAGATGGAAGACACCATCGAAGAAAAACAGT...AAGGTGCAGAATGGATTGAAGATAGCCAGTGCCAACCTCTAGCCTATACACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR CCA 90 bp	GAAAGTCTGTCTCCTCAACTTCATGATCACACCCTTGGGTCTCCAAGATCAACTACTGTTTTTCTTCGATaGTGTCTTCCATCTGCCCTG	+
Preference number: 4 (lower is better) Translates to: ESLSPQLHDHTLGSPRSTTVFLR*CLPSAL Trigger: CAGGGCAGATGGAAGACACCATCGAAGAAAAACAGT...AGTTGATCTTGGAGACCCAAGGGTGTGATCATGAAGTTGAGGAGACAGACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	TTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTTTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: FASDAHWMAAPRIPFSLPLFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...AGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR TCA 90 bp	AGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTAGTTTTTCCTGGGTTTaGAGTCCCCGACCTCGTCGT	+
Preference number: 4 (lower is better) Translates to: RSEGSSFASSQEGYIAWFSFSWV*SPRPRR Trigger: ACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACT...AAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	TTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCAT	+
Preference number: 4 (lower is better) Translates to: FGGLKVVVLLLVKKDILPMVSSI*PDAACH Trigger: ATGGCAGGCAGCATCAGGGCAGATGGAAGACACCAT...AGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAGCCAGAGCATTCTCTTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: SKINSLALWLPRRSQSILLFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...GAGAATGCTCTGGCTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	CCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGTTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: PILLKATFKQQGVEYMRLLFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...CAGTCTCATGTACTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CCA 90 bp	GCCTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: AFIEPILLKATFKQQGVERLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...CTCCACCCCCTGCTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
3UTR CAA 72 bp	TGCTTGCATACAACATACAAATGCACCTACCTAGCCTaGTTATGTACTTGTGGAGACCAGGAGCCTACTCAA	+
Preference number: 4 (lower is better) Translates to: CLHTTYKCTYLA*LCTCGDQEPTQ Trigger: TTGAGTAGGCTCCTGGTCTCCACAAGTACATAACAAGGCTAGGTAGGTGCATTTGTATGTTGTATGCAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
3UTR CAA 72 bp	ACCACTCCAAATCCAAGCCATCTTGTTCCAGGTCCCTaGTGTTTTAGAGACGTTTGGATGTATCAGCATGTA	+
Preference number: 4 (lower is better) Translates to: TTPNPSHLVPGP*CFRDVWMYQHV Trigger: TACATGCTGATACATCCAAACGTCTCTAAAACACAAGGGACCTGGAACAAGATGGCTTGGATTTGGAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR TCA 90 bp	TCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACAAGTTTTTCCTGGGTTTaGAGTCCCCGACCTCGTCGT	+
Preference number: 4 (lower is better) Translates to: SEGSSFASSQEGYIAWFTSFSWV*SPRPRR Trigger: ACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACT...TGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	TTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTTGCCTGCCATTTCCGTaGAAGCCTGAAAATGCTTCG	+
Preference number: 4 (lower is better) Translates to: FGGLKVVVLLLVKKDILPCLPFP*KPENAS Trigger: CGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCA...AGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR GCA 90 bp	GACCAATTTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATTGCCTGCCATTTCCGTaGAAGCCTGAAAATGCTTCG	+
Preference number: 4 (lower is better) Translates to: DQFWRSEGSSFASSQEGYCLPFP*KPENAS Trigger: CGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCA...ATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAAATTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	GGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTACTGTTTTTCTTCGATaGTGTCTTCCATCTGCCCTG	+
Preference number: 4 (lower is better) Translates to: GGLKVVVLLLVKKDILPGTVFLR*CLPSAL Trigger: CAGGGCAGATGGAAGACACCATCGAAGAAAAACAGT...ACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	CTCTGTAGGCCGCAGATAGCTCCCAAGGACAACTTCAGTGAAGATGTAAAGTCCTTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: LCRPQIAPKDNFSEDVKSLFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...GGACTTTACATCTTCACTGAAGTTGTCCTTGGGAGCTATCTGCGGCCTACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	AGGCCGCAGATAGCTCCCAAGGACAACTTCAGTGAAGATGTAAAGTCCATGACCTTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: RPQIAPKDNFSEDVKSMTLFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...GGTCATGGACTTTACATCTTCACTGAAGTTGTCCTTGGGAGCTATCTGCGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CAA 72 bp	CAAATTTTTCCTAACATGTCAGCCAGAGGAGCACAATaGCAGGGTAGGATTGAAAACCACTTGACTGGTTGT	+
Preference number: 4 (lower is better) Translates to: QIFPNMSARGAQ*QGRIENHLTGC Trigger: ACAACCAGTCAAGTGGTTTTCAATCCTACCCTGCAATTGTGCTCCTCTGGCTGACATGTTAGGAAAAATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR GCA 90 bp	AGACCAGGAGCCTACTCAAGGTATTTTCTACAACTGTTCTCCATCTTATTTATTTGCCTGCCATTTCCGTaGAAGCCTGAAAATGCTTCG	+
Preference number: 4 (lower is better) Translates to: RPGAYSRYFLQLFSILFICLPFP*KPENAS Trigger: CGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCA...AATAAATAAGATGGAGAACAGTTGTAGAAAATACCTTGAGTAGGCTCCTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR GCA 90 bp	GTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTGATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCAT	+
Preference number: 4 (lower is better) Translates to: VVLLLVKKDILPGLHSKLMVSSI*PDAACH Trigger: ATGGCAGGCAGCATCAGGGCAGATGGAAGACACCAT...CAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTCAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: FGGLKVVVLLLVKKDILPQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...AGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	AGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTCAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: RSEGSSFASSQEGYIAWFQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...AAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	AAAGTCTGTCTCCTCAACTTCATGATCACACCCTTGGGTCTCCAAGATCAACTCAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: KVCLLNFMITPLGLQDQLRLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...GAGTTGATCTTGGAGACCCAAGGGTGTGATCATGAAGTTGAGGAGACAGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR GCA 90 bp	GTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTGTGCCTGCCATTTCCGTaGAAGCCTGAAAATGCTTCG	+
Preference number: 4 (lower is better) Translates to: VVLLLVKKDILPGLHSKLCLPFP*KPENAS Trigger: CGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCA...CAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	GGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTCTGGAACAGTGTTCTaGCTTCCTTTAGTATGTACT	+
Preference number: 4 (lower is better) Translates to: GGLKVVVLLLVKKDILPGSGTVF*LPLVCT Trigger: AGTACATACTAAAGGAAGCCAGAACACTGTTCCAGA...ACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTTAAGTTCTATATAACCACTCGTCTGAGGAATCCACATTATCTCCCTGAAGTTCAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: FKFYITTRLRNPHYLPEVQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...AACTTCAGGGAGATAATGTGGATTCCTCAGACGAGTGGTTATATAGAACTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR TCA 90 bp	TTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTTCAGCTCTGGGTCTGTaGGATTTTTGTTTTTCTGGA	+
Preference number: 4 (lower is better) Translates to: FGGLKVVVLLLVKKDILPSALGL*DFCFSG Trigger: TCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGA...AGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTGAGTTGCAGATGGATAGGGCGTaGATAAGGGATCTGGTAATG	+
Preference number: 4 (lower is better) Translates to: FASSQEGYIAWFTFKTELQMDRA*IRDLVM Trigger: CATTACCAGATCCCTTATCCACGCCCTATCCATCTG...CAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	GGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: GGLKVVVLLLVKKDILPGRLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...ACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTGAGTTGACTGTTTTTCTTCGATaGTGTCTTCCATCTGCCCTG	+
Preference number: 4 (lower is better) Translates to: FASSQEGYIAWFTFKTELTVFLR*CLPSAL Trigger: CAGGGCAGATGGAAGACACCATCGAAGAAAAACAGT...CAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTCAGTGAAGATGTAAAGTCCATGACCTCTAGGGACAATGTCATAGTTCAAGCATTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: FSEDVKSMTSRDNVIVQALFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...TGCTTGAACTATGACATTGTCCCTAGAGGTCATGGACTTTACATCTTCACTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	AAGAAGGATATATTGCCTGGTTTACATTCAAAACTGAGTTGGCTCACCATTCTCAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: KKDILPGLHSKLSWLTILRLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...GAGAATGGTGAGCCAACTCAGTTTTGAATGTAAACCAGGCAATATATCCTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TTTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: FWRSEGSSFASSQEGYIARLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...GGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CAA 72 bp	GTTAAGACCAATTTTGGAGGTCTGAAGGTAGTAGTTTaGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTA	+
Preference number: 4 (lower is better) Translates to: VKTNFGGLKVVV*LLVKKDILPGL Trigger: TAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAAATTGGTCTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
3UTR CAA 72 bp	TCTGCCATTAAACCATGTATATTATTCGCTAAGCCCTaGGAACTTAGTGCATATAGTGGAATGGAACAAAAG	+
Preference number: 4 (lower is better) Translates to: SAIKPCILFAKP*ELSAYSGMEQK Trigger: CTTTTGTTCCATTCCACTATATGCACTAAGTTCCAAGGGCTTAGCGAATAATATACATGGTTTAATGGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR CCA 90 bp	GTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTCAAAACTGTCTGGAACAGTGTTCTaGCTTCCTTTAGTATGTACT	+
Preference number: 4 (lower is better) Translates to: VVLLLVKKDILPGLHSKLSGTVF*LPLVCT Trigger: AGTACATACTAAAGGAAGCCAGAACACTGTTCCAGA...CAGTTTTGAATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	TCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACAAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: SEGSSFASSQEGYIAWFTRLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...TGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	CTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATAGACTTCAGATACACTaGTTTGGAAAGTTTTCTCAG	+
Preference number: 4 (lower is better) Translates to: LKVVVLLLVKKDILPGLHRLQIH*FGKFSQ Trigger: CTGAGAAAACTTTCCAAACCAGTGTATCTGAAGTCT...ATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CCA 90 bp	CTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTACATTTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTT	+
Preference number: 4 (lower is better) Translates to: LKVVVLLLVKKDILPGLHLFNQL*VCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAA...ATGTAAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS TCA 90 bp	TGTCTTCCATCTGCCCTGATGCTGCCTGCCATTTCCGTGCAAGCCTaGAAATGCTTCGGTAGAGGCAGAGGACTTCTTGTCGGGTTGCTG	+
Preference number: 5 (lower is better) Translates to: CLPSALMLPAISVQA*KCFGRGRGLLVGLL Trigger: CAGCAACCCGACAAGAAGTCCTCTGCCTCTACCGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCAGCATCAGGGCAGATGGAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS-3UTR CAA 90 bp	TGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTC	+
Preference number: 5 (lower is better) Translates to: CIRCTLDGSPKNSLQPSSAFNYA*FNQLWV Trigger: GACCCAGAGCTGATTAAACAATGCATAGTTGAATGC...AGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CAA 90 bp	ATCCCTTTGCATCCGATGCACACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTC	+
Preference number: 5 (lower is better) Translates to: IPLHPMHTGWQPQEFPSAAFNYA*FNQLWV Trigger: GACCCAGAGCTGATTAAACAATGCATAGTTGAATGC...GGCTGAAGGGAATTCTTGGGGCTGCCATCCAGTGTGCATCGGATGCAAAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CAA 90 bp	ACTGGATGGCAGCCCCAAGAATTCCCTTCAGCCTTCCTCTGTAGGCCGCAGATAGGGTCTGTGAGATTTTaGTTTTTCTGGAACAGTGTT	+
Preference number: 5 (lower is better) Translates to: TGWQPQEFPSAFLCRPQIGSVRF*FFWNSV Trigger: AACACTGTTCCAGAAAAACAAAAATCTCACAGACCC...TATCTGCGGCCTACAGAGGAAGGCTGAAGGGAATTCTTGGGGCTGCCATCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS CCA 90 bp	GGAACAGTGTTCTGGCTTCCTTTAGTATGTACTGTTTTTCTTCGATaGTGTCTTCCATCTGCCCTGATGCTGCCTGCCATTTCCGTGCAA	+
Preference number: 5 (lower is better) Translates to: GTVFWLPLVCTVFLR*CLPSALMLPAISVQ Trigger: TTGCACGGAAATGGCAGGCAGCATCAGGGCAGATGGAAGACACCATCGAAGAAAAACAGTACATACTAAAGGAAGCCAGAACACTGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS-3UTR CAA 90 bp	TTCATGATCACACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGTGGCTGCCGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTC	+
Preference number: 5 (lower is better) Translates to: FMITPLGLQDQLLGIVAAAFNYA*FNQLWV Trigger: GACCCAGAGCTGATTAAACAATGCATAGTTGAATGC...GGCAGCCACAATGCCAAGGAGTTGATCTTGGAGACCCAAGGGTGTGATCATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS GCA 90 bp	GCTTCCTTTAGTATGTACTGTTTTTCTTCGATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCATTTCCGTGCAAGCCTGAAAATGCTT	+
Preference number: 5 (lower is better) Translates to: ASFSMYCFSSMVSSI*PDAACHFRASLKML Trigger: AAGCATTTTCAGGCTTGCACGGAAATGGCAGGCAGCATCAGGGCAGATGGAAGACACCATCGAAGAAAAACAGTACATACTAAAGGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS-3UTR CAA 90 bp	CTCTGTAGGCCGCAGATAGCTCCCAAGGACAACTTCAGTGAAGATGTAAAGTCCGGGTCTGTGAGATTTTaGTTTTTCTGGAACAGTGTT	+
Preference number: 5 (lower is better) Translates to: LCRPQIAPKDNFSEDVKSGSVRF*FFWNSV Trigger: AACACTGTTCCAGAAAAACAAAAATCTCACAGACCC...GGACTTTACATCTTCACTGAAGTTGTCCTTGGGAGCTATCTGCGGCCTACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS CCA 90 bp	CTCAATCCGGGCCGTGCATTCAACTATGCATTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTTTTTCTGGAACAGTGTTCTGGCTTC	+
Preference number: 5 (lower is better) Translates to: LNPGRAFNYALFNQL*VCEIFVFLEQCSGF Trigger: GAAGCCAGAACACTGTTCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGATTAAACAATGCATAGTTGAATGCACGGCCCGGATTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS-3UTR CAA 90 bp	CCACATTATCTCCCTGAAGTTGCCGTGAAAGTCTGTCTCCTCAACTTCATGATCGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTC	+
Preference number: 5 (lower is better) Translates to: PHYLPEVAVKVCLLNFMIAFNYA*FNQLWV Trigger: GACCCAGAGCTGATTAAACAATGCATAGTTGAATGC...GATCATGAAGTTGAGGAGACAGACTTTCACGGCAACTTCAGGGAGATAATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207270.2 ENSMUST00000208424.2
CDS-3UTR CAA 90 bp	CTCCAAATCCAAGCCATCTTGTTCCAGGTCCCTTGTGTTTTAGAGACGTTTGGAGGGTCTGTGAGATTTTaGTTTTTCTGGAACAGTGTT	+
Preference number: 5 (lower is better) Translates to: LQIQAILFQVPCVLETFGGSVRF*FFWNSV Trigger: AACACTGTTCCAGAAAAACAAAAATCTCACAGACCC...TCCAAACGTCTCTAAAACACAAGGGACCTGGAACAAGATGGCTTGGATTTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207270.2
CDS-3UTR CAA 90 bp	GGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTGGGTCTGTGAGATTTTaGTTTTTCTGGAACAGTGTT	+
Preference number: 5 (lower is better) Translates to: GGLKVVVLLLVKKDILPGGSVRF*FFWNSV Trigger: AACACTGTTCCAGAAAAACAAAAATCTCACAGACCC...ACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CAA 90 bp	AGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGTTTGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTC	+
Preference number: 5 (lower is better) Translates to: RSEGSSFASSQEGYIAWFAFNYA*FNQLWV Trigger: GACCCAGAGCTGATTAAACAATGCATAGTTGAATGC...AAACCAGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CAA 90 bp	GACCAATTTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTC	+
Preference number: 5 (lower is better) Translates to: DQFWRSEGSSFASSQEGYAFNYA*FNQLWV Trigger: GACCCAGAGCTGATTAAACAATGCATAGTTGAATGC...ATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAAATTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS-3UTR CAA 90 bp	TTTGGAGGTCTGAAGGTAGTAGTTTTGCTTCTAGTCAAGAAGGATATATTGCCTGGGTCTGTGAGATTTTaGTTTTTCTGGAACAGTGTT	+
Preference number: 5 (lower is better) Translates to: FGGLKVVVLLLVKKDILPGSVRF*FFWNSV Trigger: AACACTGTTCCAGAAAAACAAAAATCTCACAGACCC...AGGCAATATATCCTTCTTGACTAGAAGCAAAACTACTACCTTCAGACCTCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000208202.2
CDS GCA 72 bp	CAGTTTTTCCTGGGTTTGAAGTCCCCGACCTCGTCGTaGGGTGAGACCCATTGGAGGCAGATGGATAGGGCG	+
Preference number: 6 (lower is better) Translates to: QFFLGLKSPTSS*GETHWRQMDRA Trigger: CGCCCTATCCATCTGCCTCCAATGGGTCTCACCGCACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS TCA 72 bp	TCTGCCCTGATGCTGCCTGCCATTTCCGTGCAAGCCTaGAAATGCTTCGGTAGAGGCAGAGGACTTCTTGTC	+
Preference number: 6 (lower is better) Translates to: SALMLPAISVQA*KCFGRGRGLLV Trigger: GACAAGAAGTCCTCTGCCTCTACCGAAGCATTTTCAGGCTTGCACGGAAATGGCAGGCAGCATCAGGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS GCA 72 bp	AGTATGTACTGTTTTTCTTCGATGGTGTCTTCCATCTaGCCTGATGCTGCCTGCCATTTCCGTGCAAGCCTG	+
Preference number: 6 (lower is better) Translates to: SMYCFSSMVSSI*PDAACHFRASL Trigger: CAGGCTTGCACGGAAATGGCAGGCAGCATCAGGGCAGATGGAAGACACCATCGAAGAAAAACAGTACATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS CAA 72 bp	TCCAATCTCAATCCGGGCCGTGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTCTGTGAGATTTTTGTT	+
Preference number: 6 (lower is better) Translates to: SNLNPGRAFNYA*FNQLWVCEIFV Trigger: AACAAAAATCTCACAGACCCAGAGCTGATTAAACAATGCATAGTTGAATGCACGGCCCGGATTGAGATTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS CAA 90 bp	GTAATGCAGTCCAATCTCAATCCGGGCCGTGCATTCAACTATGCATaGTTTAATCAGCTCTGGGTCTGTGAGATTTTTGTTTTTCTGGAA	+
Preference number: 6 (lower is better) Translates to: VMQSNLNPGRAFNYA*FNQLWVCEIFVFLE Trigger: TTCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGATTAAACAATGCATAGTTGAATGCACGGCCCGGATTGAGATTGGACTGCATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS CCA 72 bp	GGCCGTGCATTCAACTATGCATTGTTTAATCAGCTCTaGGTCTGTGAGATTTTTGTTTTTCTGGAACAGTGT	+
Preference number: 6 (lower is better) Translates to: GRAFNYALFNQL*VCEIFVFLEQC Trigger: ACACTGTTCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGATTAAACAATGCATAGTTGAATGCACGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2
CDS CAA 90 bp	CATTCAACTATGCATTGTTTAATCAGCTCTGGGTCTGTGAGATTTTaGTTTTTCTGGAACAGTGTTCTGGCTTCCTTTAGTATGTACTGT	+
Preference number: 6 (lower is better) Translates to: HSTMHCLISSGSVRF*FFWNSVLASFSMYC Trigger: ACAGTACATACTAAAGGAAGCCAGAACACTGTTCCAGAAAAACAAAAATCTCACAGACCCAGAGCTGATTAAACAATGCATAGTTGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000054440.11 ENSMUST00000106516.2 ENSMUST00000106517.9 ENSMUST00000106518.9 ENSMUST00000207270.2 ENSMUST00000208202.2 ENSMUST00000208424.2

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