Pregenerated sensors for LYPLAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039246Ensembl transcript IDs: ENSMUST00000045388.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTTATGACAGCCTCACACAGGAAGTCACCCAAATCTGTGATGCATaGACAAGCACATTCCAGTGTGCCCCCTCAATGGTACCTATGCAG | + |
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Preference number: 1 (lower is better) Translates to: IYDSLTQEVTQICDA*TSTFQCAPSMVPMQ Trigger: CTGCATAGGTACCATTGAGGGGGCACACTGGAATGTGCTTGTCCATGCATCACAGATTTGGGTGACTTCCTGTGTGAGGCTGTCATAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR CCA 90 bp | ATCTTGGCAGTGAATAATTTTCACAAAGATAATCTACAAACAGATTaGGCAGGGCAAACTGATTTTCACAAATCTGGGAAGCCTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ILAVNNFHKDNLQTD*AGQTDFHKSGKPSV Trigger: CACTGAAGGCTTCCCAGATTTGTGAAAATCAGTTTGCCCTGCCCAATCTGTTTGTAGATTATCTTTGTGAAAATTATTCACTGCCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR-3UTR TCA 90 bp | TCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACACTATGAAGTGCTAAAGCCACATTaGGAAGCAGCTGGGCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: SHHWHQESRNQMLREHYEVLKPH*EAAGPF Trigger: AAACGGCCCAGCTGCTTCTCAATGTGGCTTTAGCAC...TTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCTCCACCTTAGGGTGGATGTTTGCACCTCATAGCAGCCCTATTTATGACCCTCAATGGTACCTATaGAGCAACAAAATGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: QLSTLGWMFAPHSSPIYDPQWYL*SNKMNS Trigger: ACTGTTCATTTTGTTGCTGCATAGGTACCATTGAGG...GTCATAAATAGGGCTGCTATGAGGTGCAAACATCCACCCTAAGGTGGAGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR CCA 72 bp | CACCAGAACAAACAAGATGAAGGTCAGGTGCATAACTaGGCCTCAGGGGCCACCACACTGCTGACTGGAATG | + |
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Preference number: 3 (lower is better) Translates to: HQNKQDEGQVHN*ASGATTLLTGM Trigger: CATTCCAGTCAGCAGTGTGGTGGCCCCTGAGGCCCAGTTATGCACCTGACCTTCATCTTGTTTGTTCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR CCA 72 bp | GGAATGGAAGGTGCTAAAGCCACATTGAGAAGCAGCTaGGCCGTTTCAGGCGATGCTATAACACTGTCACCC | + |
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Preference number: 3 (lower is better) Translates to: GMEGAKATLRSS*AVSGDAITLSP Trigger: GGGTGACAGTGTTATAGCATCGCCTGAAACGGCCCAGCTGCTTCTCAATGTGGCTTTAGCACCTTCCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR CCA 72 bp | AGCCTCACACAGGAAGTCACCCAAATCTGTGATGCATaGACAAGCACATTCCAGTGTGCCCCCTCAATGGTA | + |
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Preference number: 3 (lower is better) Translates to: SLTQEVTQICDA*TSTFQCAPSMV Trigger: TACCATTGAGGGGGCACACTGGAATGTGCTTGTCCATGCATCACAGATTTGGGTGACTTCCTGTGTGAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCTCCACCTTAGGGTGGATGTTTGCACCTCATAGCAGCCCTATTTATGACGATATGCAATTTCATTaGTATAATATAGGGGCACGG | + |
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Preference number: 3 (lower is better) Translates to: QLSTLGWMFAPHSSPIYDDMQFH*YNIGAR Trigger: CCGTGCCCCTATATTATACAAATGAAATTGCATATC...GTCATAAATAGGGCTGCTATGAGGTGCAAACATCCACCCTAAGGTGGAGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR GCA 72 bp | TATCGCATCATTGGCACCAAGAAAGCAGAAATCAAATaGTACGTGAACACTATGAAGCCACCAGAACAAACA | + |
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Preference number: 3 (lower is better) Translates to: YRIIGTKKAEIK*YVNTMKPPEQT Trigger: TGTTTGTTCTGGTGGCTTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| 3UTR TCA 72 bp | CCTCAATGGTACCTATGCAGCAACAAAATGAACAGTTaGCATTCACTACATGATGATTTACAAGACAATCTT | + |
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Preference number: 3 (lower is better) Translates to: PQWYLCSNKMNS*HSLHDDLQDNL Trigger: AAGATTGTCTTGTAAATCATCATGTAGTGAATGTCAACTGTTCATTTTGTTGCTGCATAGGTACCATTGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR TCA 90 bp | CCTCATAGCAGCCCTATTTATGACAGCCTCACACAGGAAGTCACCCAAATCTGTACACAACGCGGCAGGTaGACAGCGCTGGGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PHSSPIYDSLTQEVTQICTQRGR*TALGTA Trigger: TGCTGTGCCCAGCGCTGTTCACCTGCCGCGTTGTGT...ACAGATTTGGGTGACTTCCTGTGTGAGGCTGTCATAAATAGGGCTGCTATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR GCA 90 bp | CCTCATAGCAGCCCTATTTATGACAGCCTCACACAGGAAGTCACCCAAATCTGTAGAGCTCAGGGAGCATaGGGCCACCTTGCTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PHSSPIYDSLTQEVTQICRAQGA*GHLAEG Trigger: ACCTTCAGCAAGGTGGCCGCATGCTCCCTGAGCTCT...ACAGATTTGGGTGACTTCCTGTGTGAGGCTGTCATAAATAGGGCTGCTATGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR TCA 90 bp | GGTCAGGTGCATAACTGGGCCTCAGGGGCCACCACACTGCTGACTGGAATGGAAACACATACTATCAATTaGTTCAAGGTGTTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GQVHNWASGATTLLTGMETHTIN*FKVFWA Trigger: TGCCCAGAACACCTTGAATCAATTGATAGTATGTGT...TTCCATTCCAGTCAGCAGTGTGGTGGCCCCTGAGGCCCAGTTATGCACCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCTCTCCACCTTAGGGTGGATGTTTGCACCTCATAGCAGCCCTATTTATCCCATCTGTCTCTCCTaGCAGCCTTGTGAGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: TQLSTLGWMFAPHSSPIYPICLS*QPCENP Trigger: TGGATTCTCACAAGGCTGCCAGGAGAGACAGATGGG...ATAAATAGGGCTGCTATGAGGTGCAAACATCCACCCTAAGGTGGAGAGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CCA 90 bp | AAACAAGATGAAGGTCAGGTGCATAACTGGGCCTCAGGGGCCACCACACTGCTGGTTTTGTTGAGCTCATaGTTAAGATTCGGAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: KQDEGQVHNWASGATTLLVLLSS*LRFGRL Trigger: CAGTCTTCCGAATCTTAACCATGAGCTCAACAAAAC...CAGCAGTGTGGTGGCCCCTGAGGCCCAGTTATGCACCTGACCTTCATCTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCACCTTAGGGTGGATGTTTGCACCTCATAGCAGCCCTATTTATGACAGCAAGAACAAATACTCCTaGCACATCTGGGTGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSTLGWMFAPHSSPIYDSKNKYS*HIWVTS Trigger: AGAAGTCACCCAGATGTGGCAGGAGTATTTGTTCTT...GCTGTCATAAATAGGGCTGCTATGAGGTGCAAACATCCACCCTAAGGTGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CCA 90 bp | ATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACACTATGAAGCCACCATGTCAAACCACACATTaGAGAGCCCTCCCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: IGTKKAEIKCYVNTMKPPCQTTH*RALPSE Trigger: CTCTGAAGGGAGGGCTCTCCAATGTGTGGTTTGACA...TGGTGGCTTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR TCA 90 bp | ACCCAGCTCTCCACCTTAGGGTGGATGTTTGCACCTCATAGCAGCCCTATTTATAATATCCTGCTCTTCTaGATGCCAGTTTTTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: TQLSTLGWMFAPHSSPIYNILLF*MPVFTS Trigger: AGAAGTAAAAACTGGCATTCAGAAGAGCAGGATATT...ATAAATAGGGCTGCTATGAGGTGCAAACATCCACCCTAAGGTGGAGAGCTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR TCA 90 bp | GATTCTGTATCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACCTGCCACATCTGGGTaGCTTCTGTATGCTAAATGC | + |
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Preference number: 4 (lower is better) Translates to: DSVSHHWHQESRNQMLREPATSG*LLYAKC Trigger: GCATTTAGCATACAGAAGTCACCCAGATGTGGCAGG...TTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGATACAGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CCA 90 bp | CCTCATAGCAGCCCTATTTATGACAGCCTCACACAGGAAGTCACCCAAATCTGTTGGAATGTTAAGTCTTaGTTTAGCACGTGCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: PHSSPIYDSLTQEVTQICWNVKS*FSTCLI Trigger: GATCAAGCACGTGCTAAACCAAGACTTAACATTCCA...ACAGATTTGGGTGACTTCCTGTGTGAGGCTGTCATAAATAGGGCTGCTATGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR TCA 90 bp | CCTCATAGCAGCCCTATTTATGACAGCCTCACACAGGAAGTCACCCAAATCTGTAATCCACTGAGCACTTaGCACATACTATCAATTGAT | + |
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Preference number: 4 (lower is better) Translates to: PHSSPIYDSLTQEVTQICNPLST*HILSID Trigger: ATCAATTGATAGTATGTGTCAAGTGCTCAGTGGATT...ACAGATTTGGGTGACTTCCTGTGTGAGGCTGTCATAAATAGGGCTGCTATGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR TCA 90 bp | GAAGCCTTCAGTGTAGGATTCTGTATCGCATCATTGGCACCAAGAAAGCAGAAACATCAACCAATCCACTaGGCACTTGACACATACTAT | + |
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Preference number: 4 (lower is better) Translates to: EAFSVGFCIASLAPRKQKHQPIH*ALDTYY Trigger: ATAGTATGTGTCAAGTGCTCAGTGGATTGGTTGATG...TTTCTGCTTTCTTGGTGCCAATGATGCGATACAGAATCCTACACTGAAGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR GCA 90 bp | TCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACACTATGAATTGAGTTTGTCTCCTTaGCCCAAGCATGCAGAACTA | + |
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Preference number: 4 (lower is better) Translates to: SHHWHQESRNQMLREHYELSLSP*PKHAEL Trigger: TAGTTCTGCATGCTTGGGGCAAGGAGACAAACTCAA...TTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR GCA 90 bp | ATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACACTATGAAGCCACCAGACTGTGAAACGTTGTaGTCACTCCTAGAGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: IGTKKAEIKCYVNTMKPPDCETL*SLLEIS Trigger: TGAAATCTCTAGGAGTGAGCACAACGTTTCACAGTC...TGGTGGCTTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR GCA 90 bp | GATTCTGTATCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACCCCTATTAATATCCTaGTCTTCTGAATGCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: DSVSHHWHQESRNQMLREPLLIS*SSECQF Trigger: AAACTGGCATTCAGAAGAGCAGGATATTAATAGGGG...TTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGATACAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 90 bp | TGGTTTAGCACGTGCTTGATCCACTCTCTCTGTCCTTGGCCAGAGTaGCCTGAGCCGTGCAGGAAGATCAGCGAGGCACTGTGTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: WFSTCLIHSLCPWPE*PEPCRKISEALCLP Trigger: CGGGAGACACAGTGCCTCGCTGATCTTCCTGCACGGCTCAGGTCACTCTGGCCAAGGACAGAGAGAGTGGATCAAGCACGTGCTAAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS GCA 90 bp | CTAGGTTATCTGCAGAGCCGTGACACTGGAAGAGCTCAGGGAGCATaGGGCCACCTTGCTGAAGGTCCTGGTAAACAACAGATGCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LGYLQSRDTGRAQGA*GHLAEGPGKQQMLY Trigger: ATAAAGCATCTGTTGTTTACCAGGACCTTCAGCAAGGTGGCCGCATGCTCCCTGAGCTCTTCCAGTGTCACGGCTCTGCAGATAACCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CAA 90 bp | AGCCACCAGAACAAACAAGATGAAGGTCAGGTGCATAACTGGGCCTCAGGGGCCGACACATACTATCAATaGATTCAAGGTGTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SHQNKQDEGQVHNWASGADTYYQ*IQGVLG Trigger: GCCCAGAACACCTTGAATCAATTGATAGTATGTGTC...GGCCCCTGAGGCCCAGTTATGCACCTGACCTTCATCTTGTTTGTTCTGGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS GCA 90 bp | ACGTTGTGCTCACTCCTAGAGATTTCAGTTTTGAGTTTGTCTCCTTaGCCCAAGCATGCAGAACTAGGTTATCTGCAGAGCCGTGACACT | + |
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Preference number: 5 (lower is better) Translates to: TLCSLLEISVLSLSP*PKHAELGYLQSRDT Trigger: AGTGTCACGGCTCTGCAGATAACCTAGTTCTGCATGCTTGGGGCAAGGAGACAAACTCAAAACTGAAATCTCTAGGAGTGAGCACAACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CAA 90 bp | CCTCATAGCAGCCCTATTTATGACAGCCTCACACAGGAAGTCACCCAAATCTGTTTCTCCAGCTCAGTTTaGTTGAGCTCATGGTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: PHSSPIYDSLTQEVTQICFSSSV*LSSWLR Trigger: TCTTAACCATGAGCTCAACAAAACTGAGCTGGAGAA...ACAGATTTGGGTGACTTCCTGTGTGAGGCTGTCATAAATAGGGCTGCTATGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 90 bp | TTATTCAGAAAACCAGAAAGAACAAATACTCCTGCCACATCTGGGTaGCTTCTGTATGCTAAATGCATCGCCATGCAGCCTCCCATAGAA | + |
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Preference number: 5 (lower is better) Translates to: LFRKPERTNTPATSG*LLYAKCIAMQPPIE Trigger: TTCTATGGGAGGCTGCATGGCGATGCATTTAGCATACAGAAGTCACCCAGATGTGGCAGGAGTATTTGTTCTTTCTGGTTTTCTGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CAA 90 bp | GCAGTGAATAATTTTCACAAAGATAATCTACAAACAGATTGGGCAGGGCAAACTCTGTCAAACCACACATaGGAGAGCCCTCCCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: AVNNFHKDNLQTDWAGQTLSNHT*ESPPFR Trigger: TCTGAAGGGAGGGCTCTCCAATGTGTGGTTTGACAG...AGTTTGCCCTGCCCAATCTGTTTGTAGATTATCTTTGTGAAAATTATTCACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGTATCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACCTAGAGATTTCAGTTTaGAGTTTGTCTCCTTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: ILYRIIGTKKAEIKCYVNLEISV*SLSPCP Trigger: GGGGCAAGGAGACAAACTCAAAACTGAAATCTCTAG...GTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGATACAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CAA 90 bp | TCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACACTATGAAGAAGACTGTGAAACGTaGTGCTCACTCCTAGAGATT | + |
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Preference number: 5 (lower is better) Translates to: SHHWHQESRNQMLREHYEEDCET*CSLLEI Trigger: AATCTCTAGGAGTGAGCACAACGTTTCACAGTCTTC...TTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 90 bp | TGCTCTTCTGAATGCCAGTTTTTACTTCTTCATCAACCAATCCACTaGGCACTTGACACATACTATCAATTGATTCAAGGTGTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: CSSECQFLLLHQPIH*ALDTYYQLIQGVLG Trigger: GCCCAGAACACCTTGAATCAATTGATAGTATGTGTCAAGTGCTCAGTGGATTGGTTGATGAAGAAGTAAAAACTGGCATTCAGAAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS-3UTR CAA 90 bp | TCGCATCATTGGCACCAAGAAAGCAGAAATCAAATGCTACGTGAACACTATGAAATTTCAGTTTTGAGTTaGTCTCCTTGCCCCAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SHHWHQESRNQMLREHYEISVLS*SPCPKH Trigger: ATGCTTGGGGCAAGGAGACAAACTCAAAACTGAAAT...TTCATAGTGTTCACGTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 90 bp | TTCTTCATCAACCAATCCACTGAGCACTTGACACATACTATCAATTaGTTCAAGGTGTTCTGGGCAGTCCATAGATATTTTAAATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: FFINQSTEHLTHTIN*FKVFWAVHRYFKSV Trigger: GACAGATTTAAAATATCTATGGACTGCCCAGAACACCTTGAATCAATTGATAGTATGTGTCAAGTGCTCAGTGGATTGGTTGATGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | ACGTGCTTGATCCACTCTCTCTGTCCTTGGCCAGAGTaGCCTGAGCCGTGCAGGAAGATCAGCGAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: TCLIHSLCPWPE*PEPCRKISEAL Trigger: CAGTGCCTCGCTGATCTTCCTGCACGGCTCAGGTCACTCTGGCCAAGGACAGAGAGAGTGGATCAAGCACGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | CCCCAAGCATGCAGAACTAGGTTATCTGCAGAGCCGTaGCACTGGAAGAGCTCAGGGAGCATGCGGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PQACRTRLSAEP*HWKSSGSMRPP Trigger: AGGTGGCCGCATGCTCCCTGAGCTCTTCCAGTGTCACGGCTCTGCAGATAACCTAGTTCTGCATGCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS GCA 72 bp | CTGCAGAGCCGTGACACTGGAAGAGCTCAGGGAGCATaGGGCCACCTTGCTGAAGGTCCTGGTAAACAACAG | + |
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Preference number: 6 (lower is better) Translates to: LQSRDTGRAQGA*GHLAEGPGKQQ Trigger: CTGTTGTTTACCAGGACCTTCAGCAAGGTGGCCGCATGCTCCCTGAGCTCTTCCAGTGTCACGGCTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | CTTGATCCACTCTCTCTGTCCTTGGCCAGAGTGACCTaGGCCGTGCAGGAAGATCAGCGAGGCACTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LDPLSLSLARVT*AVQEDQRGTVS Trigger: AGACACAGTGCCTCGCTGATCTTCCTGCACGGCTCAGGTCACTCTGGCCAAGGACAGAGAGAGTGGATCAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS CAA 90 bp | TGTTCTGGGCAGTCCATAGATATTTTAAATCTGTCAAACCACACATaGGAGAGCCCTCCCTTCAGAGGAGTATACGGCCTGGAGGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSGQSIDILNLSNHT*ESPPFRGVYGLEGA Trigger: GGCCCCCTCCAGGCCGTATACTCCTCTGAAGGGAGGGCTCTCCAATGTGTGGTTTGACAGATTTAAAATATCTATGGACTGCCCAGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS CAA 72 bp | GTGACACTGGAAGAGCTCAGGGAGCATGCGGCCACCTaGCTGAAGGTCCTGGTAAACAACAGATGCTTTATT | + |
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Preference number: 6 (lower is better) Translates to: VTLEELREHAAT*LKVLVNNRCFI Trigger: AATAAAGCATCTGTTGTTTACCAGGACCTTCAGCAAGGTGGCCGCATGCTCCCTGAGCTCTTCCAGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS CAA 90 bp | GACTGTGAAACGTTGTGCTCACTCCTAGAGATTTCAGTTTTGAGTTaGTCTCCTTGCCCCAAGCATGCAGAACTAGGTTATCTGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: DCETLCSLLEISVLS*SPCPKHAELGYLQS Trigger: GCTCTGCAGATAACCTAGTTCTGCATGCTTGGGGCAAGGAGACAAACTCAAAACTGAAATCTCTAGGAGTGAGCACAACGTTTCACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS CAA 90 bp | TCGGAAGACTGTGAAACGTTGTGCTCACTCCTAGAGATTTCAGTTTaGAGTTTGTCTCCTTGCCCCAAGCATGCAGAACTAGGTTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SEDCETLCSLLEISV*SLSPCPKHAELGYL Trigger: CAGATAACCTAGTTCTGCATGCTTGGGGCAAGGAGACAAACTCAAAACTGAAATCTCTAGGAGTGAGCACAACGTTTCACAGTCTTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | AAACCAGAAAGAACAAATACTCCTGCCACATCTGGGTaGCTTCTGTATGCTAAATGCATCGCCATGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KPERTNTPATSG*LLYAKCIAMQP Trigger: AGGCTGCATGGCGATGCATTTAGCATACAGAAGTCACCCAGATGTGGCAGGAGTATTTGTTCTTTCTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS CAA 72 bp | CAGTCCATAGATATTTTAAATCTGTCAAACCACACATaGGAGAGCCCTCCCTTCAGAGGAGTATACGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QSIDILNLSNHT*ESPPFRGVYGL Trigger: CAGGCCGTATACTCCTCTGAAGGGAGGGCTCTCCAATGTGTGGTTTGACAGATTTAAAATATCTATGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS CAA 72 bp | ACGTTGTGCTCACTCCTAGAGATTTCAGTTTTGAGTTaGTCTCCTTGCCCCAAGCATGCAGAACTAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: TLCSLLEISVLS*SPCPKHAELGY Trigger: ATAACCTAGTTCTGCATGCTTGGGGCAAGGAGACAAACTCAAAACTGAAATCTCTAGGAGTGAGCACAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | GTTTTGTTGAGCTCATGGTTAAGATTCGGAAGACTGTaGAACGTTGTGCTCACTCCTAGAGATTTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLLSSWLRFGRL*NVVLTPRDFSF Trigger: AAAACTGAAATCTCTAGGAGTGAGCACAACGTTTCACAGTCTTCCGAATCTTAACCATGAGCTCAACAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | GTTTTTACTTCTTCATCAACCAATCCACTGAGCACTTaGCACATACTATCAATTGATTCAAGGTGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VFTSSSTNPLST*HILSIDSRCSG Trigger: CCCAGAACACCTTGAATCAATTGATAGTATGTGTCAAGTGCTCAGTGGATTGGTTGATGAAGAAGTAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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| CDS TCA 72 bp | GAATGCCAGTTTTTACTTCTTCATCAACCAATCCACTaGGCACTTGACACATACTATCAATTGATTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: ECQFLLLHQPIH*ALDTYYQLIQG Trigger: ACCTTGAATCAATTGATAGTATGTGTCAAGTGCTCAGTGGATTGGTTGATGAAGAAGTAAAAACTGGCATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045388.8 |
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