Pregenerated sensors for LYPD8L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037145Ensembl transcript IDs: ENSMUST00000048801.8, ENSMUST00000108821.8
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATaGGCTTATGTACACAGGATTGTGGGATTGCCGGTG | + |
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Preference number: 3 (lower is better) Translates to: FHVLEISIQVYQ*AYVHRIVGLPV Trigger: CACCGGCAATCCCACAATCCTGTGTACATAAGCCCATTGGTATACTTGGATGCTTATTTCCAAAACATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR GCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGTTTTCTTTGTTGCACTaGTCACCGGTGCAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMFSLLH*SPVQHW Trigger: CCAGTGCTGCACCGGTGAGCAGTGCAACAAAGAAAA...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR GCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGACAGTCATATACAGTaGACAGGCATTTTCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMDSHIQ*TGIFCC Trigger: GCAACAGAAAATGCCTGTGCACTGTATATGACTGTC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGTTAGGGGAGTTGTCGTaGAGCACGTATTGGTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMLGELS*STYWFY Trigger: ATAAAACCAATACGTGCTCCACGACAACTCCCCTAA...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR TCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGTTTCTGTATTTGGCTaGAGCAGCTATAAGAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMVSVFG*SSYKRL Trigger: TAACCTCTTATAGCTGCTTCAGCCAAATACAGAAAC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR TCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGAAGGCACATAGGTTTTaGTATGAAGCACACCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMKAHRF*YEAHPF Trigger: AAAAGGGTGTGCTTCATATCAAAACCTATGTGCCTT...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR TCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGATAATGGAGGCAGAGTaGGATTTTCTTTGTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMIMEAE*DFLCCT Trigger: AGTGCAACAAAGAAAATCTCACTCTGCCTCCATTAT...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR TCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGACATTCAACACCATTaGCTTCTGAAGATAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMDIQHH*LLKIME Trigger: CTCCATTATCTTCAGAAGTCAATGGTGTTGAATGTC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR GCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGACAGGCATTTTCTGTTaGACAGCCTTTTCCATACAT | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMTGIFC*TAFSIH Trigger: ATGTATGGAAAAGGCTGTGCAACAGAAAATGCCTGT...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGTCGTGGAGCACGTATTaGTTTTATTATTGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMSWSTY*FYYCSR Trigger: CCTGCTACAATAATAAAACCAATACGTGCTCCACGA...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGTACTATATTAGAAGATaGGTCTCTGCTGGTAACCTC | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMYYIRR*VSAGNL Trigger: GAGGTTACCAGCAGAGACCCATCTTCTAATATAGTA...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGCAAAGCAAGATTTTCTaGAGAAGCAGAATAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMQSKIF*RSRITG Trigger: CCCAGTTATTCTGCTTCTCCAGAAAATCTTGCTTTG...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CCA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGTTTGTATCTGGAGATaGTGTTTCCAGTTTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMVCIWR*CFQFLY Trigger: ATACAGAAACTGGAAACACCATCTCCAGATACAAAC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| 3UTR CAA 72 bp | AGAGAAGTAATCACCAGTCTTTATTTGTTCCATGTTTaGGAAATAAGCATCCAAGTATACCAATGGGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: REVITSLYLFHV*EISIQVYQWAY Trigger: ATAAGCCCATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTGATTACTTCTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGTCGATTCCCCAGTGTaGCTGAGAACTCCAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMVDSPV*LRTPRH Trigger: GTGCCTTGGAGTTCTCAGCAACACTGGGGAATCGAC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGAGTGATGCAGCGGATTaGAGGGCAGGGCTTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMSDAAD*RAGLPL Trigger: CAATGGAAGCCCTGCCCTCAAATCCGCTGCATCACT...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGTGAGATTTTCTTTGTaGCACTGCTCACCGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMVRFSL*HCSPVQ Trigger: CTGCACCGGTGAGCAGTGCAACAAAGAAAATCTCAC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGAGAGTGAGATTTTCTTaGTTGCACTGCTCACCGGTG | + |
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Preference number: 5 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMRVRFS*LHCSPV Trigger: CACCGGTGAGCAGTGCAACAAAGAAAATCTCACTCT...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGGCTCAAGTACTAGGTTaGTATCTGGAGATGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMAQVLG*YLEMVF Trigger: AAACACCATCTCCAGATACAAACCTAGTACTTGAGC...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTTATTTGTTCCATGTTTTGGAAATAAGCATCCAAGTATACCAATGTTCCAGTTTCTGTATTaGGCTGAAGCAGCTATAAGA | + |
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Preference number: 5 (lower is better) Translates to: HQSLFVPCFGNKHPSIPMFQFLY*AEAAIR Trigger: TCTTATAGCTGCTTCAGCCAAATACAGAAACTGGAA...CATTGGTATACTTGGATGCTTATTTCCAAAACATGGAACAAATAAAGACTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 72 bp | TGGAGAAGCAGAATAACTGGGAGTGATGCAGCGGATTaGAGGGCAGGGCTTCCATTGGTCGAAATGCACGAG | + |
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Preference number: 6 (lower is better) Translates to: WRSRITGSDAAD*RAGLPLVEMHE Trigger: CTCGTGCATTTCGACCAATGGAAGCCCTGCCCTCAAATCCGCTGCATCACTCCCAGTTATTCTGCTTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS TCA 72 bp | AAGCAAGATTTTCTGGAGAAGCAGAATAACTGGGAGTaGTGCAGCGGATTTGAGGGCAGGGCTTCCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: KQDFLEKQNNWE*CSGFEGRASIG Trigger: ACCAATGGAAGCCCTGCCCTCAAATCCGCTGCATCACTCCCAGTTATTCTGCTTCTCCAGAAAATCTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 72 bp | GGGAGTGATGCAGCGGATTTGAGGGCAGGGCTTCCATaGGTCGAAATGCACGAGGTTTTAATTTGTATGTTA | + |
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Preference number: 6 (lower is better) Translates to: GSDAADLRAGLP*VEMHEVLICML Trigger: TAACATACAAATTAAAACCTCGTGCATTTCGACCAATGGAAGCCCTGCCCTCAAATCCGCTGCATCACTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS TCA 72 bp | CCCAGTGTTGCTGAGAACTCCAAGGCACATAGGTTTTaGTATGAAGCACACCCTTTTTGCTCAAGTACTAGG | + |
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Preference number: 6 (lower is better) Translates to: PSVAENSKAHRF*YEAHPFCSSTR Trigger: CCTAGTACTTGAGCAAAAAGGGTGTGCTTCATATCAAAACCTATGTGCCTTGGAGTTCTCAGCAACACTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CCA 72 bp | CTGTGCACTTTAGGGGAGTTGTCGTGGAGCACGTATTaGTTTTATTATTGTAGCAGGCAGGACATTCAACAC | + |
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Preference number: 6 (lower is better) Translates to: LCTLGELSWSTY*FYYCSRQDIQH Trigger: GTGTTGAATGTCCTGCCTGCTACAATAATAAAACCAATACGTGCTCCACGACAACTCCCCTAAAGTGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 72 bp | TGTACCCCCAAGACAATTTCCATTTTCACACGTAGCTaGTATACACGTGTAACTCTCTACAGAGCAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: CTPKTISIFTRS*YTRVTLYRADS Trigger: GCTGTCTGCTCTGTAGAGAGTTACACGTGTATACAAGCTACGTGTGAAAATGGAAATTGTCTTGGGGGTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 90 bp | AGAATAACTGGGAGTGATGCAGCGGATTTGAGGGCAGGGCTTCCATaGGTCGAAATGCACGAGGTTTTAATTTGTATGTTATTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: RITGSDAADLRAGLP*VEMHEVLICMLLKT Trigger: TGTCTTCAATAACATACAAATTAAAACCTCGTGCATTTCGACCAATGGAAGCCCTGCCCTCAAATCCGCTGCATCACTCCCAGTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS TCA 72 bp | TATCTGGAGATGGTGTTTCCAGTTTCTGTATTTGGCTaGAGCAGCTATAAGAGGTTAGACAGGTACTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: YLEMVFPVSVFG*SSYKRLDRYLY Trigger: GTACAAGTACCTGTCTAACCTCTTATAGCTGCTTCAGCCAAATACAGAAACTGGAAACACCATCTCCAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 90 bp | GGGCTTCCATTGGTCGAAATGCACGAGGTTTTAATTTGTATGTTATaGAAGACAGTCATATACAGTGCACAGGCATTTTCTGTTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GLPLVEMHEVLICML*KTVIYSAQAFSVAQ Trigger: CTGTGCAACAGAAAATGCCTGTGCACTGTATATGACTGTCTTCAATAACATACAAATTAAAACCTCGTGCATTTCGACCAATGGAAGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 90 bp | TTTGAGGGCAGGGCTTCCATTGGTCGAAATGCACGAGGTTTTAATTaGTATGTTATTGAAGACAGTCATATACAGTGCACAGGCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: FEGRASIGRNARGFN*YVIEDSHIQCTGIF Trigger: GAAAATGCCTGTGCACTGTATATGACTGTCTTCAATAACATACAAATTAAAACCTCGTGCATTTCGACCAATGGAAGCCCTGCCCTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CCA 72 bp | TGCACAGCCTTTTCCATACATTACTATATTAGAAGATaGGTCTCTGCTGGTAACCTCAATACACCTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CTAFSIHYYIRR*VSAGNLNTPFL Trigger: GAGAAAAGGTGTATTGAGGTTACCAGCAGAGACCCATCTTCTAATATAGTAATGTATGGAAAAGGCTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 72 bp | GATATGAAGCACACCCTTTTTGCTCAAGTACTAGGTTaGTATCTGGAGATGGTGTTTCCAGTTTCTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: DMKHTLFAQVLG*YLEMVFPVSVF Trigger: AAATACAGAAACTGGAAACACCATCTCCAGATACAAACCTAGTACTTGAGCAAAAAGGGTGTGCTTCATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS CAA 72 bp | AGGGCTTCCATTGGTCGAAATGCACGAGGTTTTAATTaGTATGTTATTGAAGACAGTCATATACAGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: RASIGRNARGFN*YVIEDSHIQCT Trigger: TGTGCACTGTATATGACTGTCTTCAATAACATACAAATTAAAACCTCGTGCATTTCGACCAATGGAAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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| CDS GCA 72 bp | GAAGACAGTCATATACAGTGCACAGGCATTTTCTGTTaGACAGCCTTTTCCATACATTACTATATTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: EDSHIQCTGIFC*TAFSIHYYIRR Trigger: TCTTCTAATATAGTAATGTATGGAAAAGGCTGTGCAACAGAAAATGCCTGTGCACTGTATATGACTGTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048801.8 ENSMUST00000108821.8 |
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